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Author SHA1 Message Date
nojhan
e389294cbb feat: EDO add combinable estimators 
Useful to edit the distribution during init, restart or even search.
 2020-03-24 16:35:49 +01:00
nojhan
77921fea0c feat: add initializer list interface to eoFunctorStore 
Easier to use while state initialize combined operators.
 2020-03-24 16:34:01 +01:00
nojhan
e0e1cb8bc9 feat: separate estimators for init and in loop in edoAlgoAdaptive 
Allows for easier reseting or editing of distribution during
restarts.
 2020-03-24 16:31:49 +01:00
nojhan
ab740b2a72 add a monitor to print on eo::log at given level 
- add eoTimedMonitor missing header
 2020-03-24 16:27:58 +01:00
nojhan
7e766f848d add eoStoreFunctor::pack to allocate & store in one line 
Instead of calling `new`, then `state.storeFunctor`, the user can just call
`Class& inst = state.pack< Class >( params )` in one line.

Use C++11's variadic templates.
 2020-03-22 18:57:50 +01:00
nojhan
38e3f40bad cleaner numerical errors management for EDO adaptive algos 
- Change the ill-condition continuator to use eigen decomposition of the
covariance matrix, just like in the adaptive estimator.
- Add a warning message in adaptive sampler.
 2020-03-17 12:05:56 +01:00
nojhan
64e14e09df move the distrib continue in EDO adaptive algos 
- Call the continuator right after the distribution update,
because we may have generated an ill-conditioned distribution,
which would lead to bad solution sampling.
- Reserve mem of sampled vector.
 2020-03-17 12:04:02 +01:00
nojhan
f68d3c1396 add an interface toward IOHexperimenter 
Handle IOH mono-objective function and CSV logger.
 2020-03-16 18:30:48 +01:00
nojhan
11254b4fbd remove eoEvalFuncCounterBounder.h from general eo header 2020-03-16 18:22:14 +01:00
nojhan
80a11c7059 add a reset method to edoNormalAdaptive 
Useful when performing restart after exception catch.
 2020-03-16 18:21:25 +01:00
nojhan
a5354f8ef3 add eoEvalNanThrowException 
Wrap an evaluation function so that an exception may be thrown when the
eval function returns a bad value (Not A Number or infinity).
 2020-03-16 18:20:04 +01:00
nojhan
c99ed01dc6 REMOVE eoEvalFuncCounterBounder duplicate of eoEvalCounterThrowException 2020-03-16 18:19:10 +01:00
nojhan
08bbf69f44 add EDO continuator checking matrices of adaptive distribution 2020-03-16 18:17:35 +01:00
nojhan
c8121c788d make_checkpoint writes stats on clog by default 
Allow for separating logs from output of an algorithm.
 2020-03-11 11:39:38 +01:00
nojhan
67aaf8b025 add option to exit after make_help + fix exit code 
- Defaults to previous behaviour, which was to exit.
- Fix the returned exit code: was 1, but should be 0, as asking for help
is not an error.
 2020-03-10 09:12:39 +01:00
nojhan
124701a364 expose ScalarType in eoScalarFitness 2020-03-10 09:12:01 +01:00
nojhan
2da161fc85 update eoRNG to fit C++17 standard 
ISO C++17 does not allow 'register' storage class specifier
 2020-03-10 09:11:16 +01:00
nojhan
6232ff2f21 add eoEvalNamedPipe 
- a class to connect an external objective function through file(s)
- fix doc error in eoEvalCmd
 2020-03-08 21:44:42 +01:00
nojhan
9623f4d1f8 add missing eoEval* headers in <eo> 2020-02-09 07:09:53 +01:00
nojhan
2f5a00a7ac fix: eoEvalCmd use serialized input for the fitness instead of atof 2020-02-09 05:43:32 +01:00
nojhan
ccb4b3787b add eoEvalCmd, an eval that call a system command 2020-02-08 16:34:34 +01:00
nojhan
9056ed8989 add an eoSystemError exception 
- make members const in eoException.h classes
 2020-02-06 21:55:12 +01:00
nojhan
90c3e8ffa1 refactor: expose a eoHowMany::value function 2019-12-10 11:27:35 +01:00
nojhan
728bc6e897 feat: get a param handle from its name 
Useful for introspection and dynamic parameter management.
 2019-12-10 11:26:09 +01:00
nojhan
be782f8cfb feat: add a sequential select that returns the best individual 2019-12-10 11:24:39 +01:00
nojhan
9b887c83a6 feat: class to wrap a eoMonOp into a eoQuadOp 2019-12-10 11:20:54 +01:00
nojhan
87d4f08258 eoBitOp feat: access to preference, fix: use doubles and swap 
- Makes the `preference` member protected instead of private, which may
be used for algorithms managing their internal parameters during search.
- Replace float parameter with double, used everywhere else in the
framework.
- use std::swap instead of handmade swap.
 2019-12-10 11:18:09 +01:00
nojhan
e64417f2a5 BREAKING CHANGE: set standard to C++11, feat: accessor to breeder ops 
Give an access to the operators held by a breeder.
This is needed to design algorithms that dynamically update their
internal parameters during search.
To simplify the interface, we use a returned tuple, and thus upgrade the
C++ standard to C++11.
 2019-12-10 11:11:47 +01:00
nojhan
646f20934e fix back some errors inserted by previous refactoring 
- move PBIL classes in deprecated/, superseeded by the EDO module
 2019-12-06 15:58:27 +01:00
Ronaldd Pinho
aa5dbe82c6 Use relative includes in headers and absolute in code 
- relative includes in headers
- absolute includes in exe code
- include sstream lib in eoExceptions.h
- fix ga/make_op_ga.cpp
- fix eoSGATransform.h
 2019-12-06 15:15:22 +01:00
nojhan
d83681d6fa add cmake export to all targets & bugfix Find module 
- Add "EXPORT paradiseo-targets" to cmake's "install" commands.
- Export those targets in "paradiseo-config.cmake",
  which is needed by FindParadiseo.cmake script.
- Bugfix "FindParadiseo.cmake" script:
    - document PARADISEO_ROOT input,
    - add PARADISEO_DIR to specify a bin dir (try build, debug and release as defaults),
    - bugfix bad copy pastes involving edo and peo,
    - default messages only for eo, mo and meo.
 2019-09-29 21:14:30 +02:00
nojhan
f7608e2d51
 		Merge pull request #37 from ronaldpnh/master 
README file adapted to README.md
 2019-06-29 11:07:29 +02:00
nojhan
ff322ba27b fix missing API update 
- tutorial/Lesson3 was still using the old eoStdoutMonitor interface
 2019-04-19 06:52:38 +02:00
nojhan
f88edf0dab deactivate moeo2DMinHypervolumeArchive which has a missing header 2019-04-19 06:52:15 +02:00
Ronaldd Pinho
bedb18ff3e README file adapted to Markdown file README.md finished 2019-04-12 23:20:34 -03:00
Ronaldd Pinho
71c51139d2 Replace README file with a Markdown file README.md 2019-04-12 23:11:09 -03:00
Ronaldd Pinho
85fded52a5 Add README.md 2019-04-12 22:56:50 -03:00
nojhan
4f726f482d Fix the doc build. 2.1.0-beta 
- Fix the doc target management: now working whatever the combination of modules that is asked.
- Add edo to the doc targets.
- Add a warning when doxygen is not found.
 2018-12-08 21:11:41 +01:00
bahri
bc686f7023 Fuzzy Extension of some classical concepts 2017-05-03 13:34:39 +02:00
bahri
286dd256de Correct the last commit of Fuzzy distance 2017-04-26 11:36:00 +02:00
Mammar AMARA
a71a273a15 add new class fuzzy distance 2017-04-17 23:46:53 +02:00
Arnaud Liefooghe
ee71ea2477 minor update on permutation hoods 2016-07-07 11:28:07 +02:00
SV
fc4a398459 comment for the include of moNKlandscapesIncrEval in mo.h 2016-05-18 11:55:56 +02:00
Arnaud Liefooghe
c0bf207fc1 diversity assignment corrected in moeoFrontByFrontCrowdingDiversityAssignment.h 2016-04-19 17:34:39 +02:00
verel
c9475c4ed0 Update type of elements in QAP eval and QAP incrEval 2015-06-09 11:08:41 +02:00
verel
dbb8fbe9a7 Correction of the bug in the constructor of eoValueParam l170: numOfDigits is set before reading the value with getValue(). 2014-12-31 10:36:20 +01:00
Arnaud Liefooghe
bf7f395115 SPEA2 archive internal comparator updated on how to order ties in order to avoid some segfault with some compilers 2014-11-19 09:39:10 +01:00
verel
b151ca140d Add incremental evaluation of NK landscape when several bits could be modified 2014-11-10 15:58:56 +01:00
verel
5d43212118 Merge branch 'master' of git+ssh://scm.gforge.inria.fr//gitroot/paradiseo/paradiseo 2014-11-09 15:18:17 +01:00
verel
eb8f1e99a9 Add precision in the output of the eoValueParam.h 2014-11-09 15:17:41 +01:00