edoNormalAdaptive is using Eigen3 vectors internally, but the user is most probably using his own EO type. This patch adds a way to change the mean with an EOT instead of an Eigen3 vector.
171 lines
5.5 KiB
C++
171 lines
5.5 KiB
C++
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/*
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The Evolving Distribution Objects framework (EDO) is a template-based,
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ANSI-C++ evolutionary computation library which helps you to write your
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own estimation of distribution algorithms.
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This library is free software; you can redistribute it and/or
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modify it under the terms of the GNU Lesser General Public
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License as published by the Free Software Foundation; either
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version 2.1 of the License, or (at your option) any later version.
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This library is distributed in the hope that it will be useful,
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but WITHOUT ANY WARRANTY; without even the implied warranty of
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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Lesser General Public License for more details.
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You should have received a copy of the GNU Lesser General Public
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License along with this library; if not, write to the Free Software
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Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
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Copyright (C) 2010 Thales group
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*/
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/*
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Authors:
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Johann Dreo <johann.dreo@thalesgroup.com>
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Pierre Savéant <pierre.saveant@thalesgroup.com>
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*/
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#ifndef _edoNormalAdaptive_h
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#define _edoNormalAdaptive_h
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#include "edoDistrib.h"
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#ifdef WITH_EIGEN
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#include <Eigen/Dense>
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/** @defgroup CMAES CMAES
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*
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* CMA-ES (Covariance Matrix Adaptation Evolution Strategy) is a stochastic,
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* derivative-free methods for numerical optimization of non-linear or
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* non-convex continuous optimization problems.
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*
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* @ingroup Algorithms
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*/
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/** @defgroup Adaptivenormal Adaptive normal
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*
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* A multi-variate normal distribution that can be updated via several components.
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* This is the data structure on which works the CMA-ES algorithm.
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*
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* @ingroup Distributions
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*/
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/** A normal distribution that can be updated via several components. This is the data structure on which works the CMA-ES
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* algorithm.
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*
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* This is *just* a data structure, the operators working on it are supposed to maintain its consistency (e.g. of the
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* covariance matrix against its eigen vectors).
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*
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* The distribution is defined by its mean, its covariance matrix (which can be decomposed in its eigen vectors and
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* values), a scaling factor (sigma) and the so-called evolution paths for the covariance and sigma.
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* evolution paths.
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*
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* NOTE: this is only available as an Eigen3 implementation (built WITH_EIGEN).
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*
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* @ingroup Distributions
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* @ingroup CMAES
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* @ingroup Adaptivenormal
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*/
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template < typename EOT >
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class edoNormalAdaptive : public edoDistrib< EOT >
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{
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public:
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//typedef EOT EOType;
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typedef typename EOT::AtomType AtomType;
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typedef Eigen::Matrix< AtomType, Eigen::Dynamic, 1> Vector; // column vectors ( n lines, 1 column)
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typedef Eigen::Matrix< AtomType, Eigen::Dynamic, Eigen::Dynamic> Matrix;
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edoNormalAdaptive( unsigned int dim = 1 ) :
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_dim(dim),
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_mean( Vector::Zero(dim) ),
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_C( Matrix::Identity(dim,dim) ),
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_B( Matrix::Identity(dim,dim) ),
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_D( Vector::Constant( dim, 1) ),
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_sigma(1.0),
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_p_c( Vector::Zero(dim) ),
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_p_s( Vector::Zero(dim) )
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{
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assert( _dim > 0);
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}
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edoNormalAdaptive( unsigned int dim,
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Vector mean,
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Matrix C,
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Matrix B,
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Vector D,
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double sigma,
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Vector p_c,
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Vector p_s
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) :
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_mean( mean ),
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_C( C ),
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_B( B ),
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_D( D ),
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_sigma(sigma),
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_p_c( p_c ),
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_p_s( p_s )
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{
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assert( dim > 0);
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assert( _mean.innerSize() == dim );
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assert( _C.innerSize() == dim && _C.outerSize() == dim );
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assert( _B.innerSize() == dim && _B.outerSize() == dim );
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assert( _D.innerSize() == dim );
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assert( _sigma != 0.0 );
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assert( _p_c.innerSize() == dim );
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assert( _p_s.innerSize() == dim );
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}
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unsigned int size()
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{
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return _mean.innerSize();
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}
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Vector mean() const {return _mean;}
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Matrix covar() const {return _C;}
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Matrix coord_sys() const {return _B;}
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Vector scaling() const {return _D;}
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double sigma() const {return _sigma;}
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Vector path_covar() const {return _p_c;}
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Vector path_sigma() const {return _p_s;}
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//! Set the mean with an Eigen3 vector
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void mean( Vector m ) { _mean = m; assert( m.size() == _dim ); }
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/** Set the mean with an EOT instead of an Eigen3 mean
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*
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* Explicit copy of the EOT in a vector.
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*/
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void mean( EOT m )
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{
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Vector center( m.size() );
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for( unsigned int i=0, end=m.size(); i<end; ++i) {
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center[i] = m[i];
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}
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mean( center );
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}
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void covar( Matrix c ) { _C = c; assert( c.innerSize() == _dim && c.outerSize() == _dim ); }
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void coord_sys( Matrix b ) { _B = b; assert( b.innerSize() == _dim && b.outerSize() == _dim ); }
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void scaling( Vector d ) { _D = d; assert( d.size() == _dim ); }
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void sigma( double s ) { _sigma = s; assert( s != 0.0 );}
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void path_covar( Vector p ) { _p_c = p; assert( p.size() == _dim ); }
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void path_sigma( Vector p ) { _p_s = p; assert( p.size() == _dim ); }
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private:
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unsigned int _dim;
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Vector _mean; // mean vector
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Matrix _C; // covariance matrix
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Matrix _B; // eigen vectors / coordinates system
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Vector _D; // eigen values / scaling
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double _sigma; // absolute scaling of the distribution
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Vector _p_c; // evolution path for C
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Vector _p_s; // evolution path for sigma
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};
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#else
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#pragma message "WARNING: there is no Boost::uBLAS implementation of edoNormalAdaptive, build WITH_EIGEN if you need it."
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#endif // WITH_EIGEN
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#endif // !_edoNormalAdaptive_h
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