paradiseo/tutorial/mo/Lesson1/lesson1_fullEvalContinuator.cpp
Adèle Harrissart 490e837f7a * New tree configuration of the project:
.../
   ...           + -- EO
   |             |
   |             |
   +-- src ----- + -- EDO
   |             |
   |             |
   +-- test      + -- MO
   |             |
   |             |
   +-- tutorial  + -- MOEO
   |             |
   |             |
   +-- doc       + -- SMP
   |             |
   |             |
   ...           + -- EOMPI
                 |
                 |
                 + -- EOSERIAL

Question for current maintainers: ./README: new release?

Also:

* Moving out eompi & eoserial modules (issue #2).

* Correction of the errors when executing "make doc" command.

* Adding a solution for the conflicting headers problem (see the two CMake Cache
 Values: PROJECT_TAG & PROJECT_HRS_INSTALL_SUBPATH) (issue #1)

* Header inclusions:
        ** src: changing absolute paths into relative paths ('#include <...>' -> '#include "..."')
        ** test, tutorial: changing relative paths into absolute paths ('#include "..."' -> '#include <...>')

* Moving out some scripts from EDO -> to the root

* Add a new script for compilation and installation (see build_gcc_linux_install)

* Compilation with uBLAS library or EDO module: now ok

* Minor modifications on README & INSTALL files

* Comment eompi failed tests with no end

*** TODO: CPack (debian (DEB) & RedHat (RPM) packages) (issues #6 & #7) ***
2014-09-06 13:04:35 +02:00

218 lines
7.9 KiB
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Executable file

//-----------------------------------------------------------------------------
/** lesson1_fullEvalContinuator.cpp
*
* SV - 27/04/10 - version 1
*
*/
//-----------------------------------------------------------------------------
// standard includes
#define HAVE_SSTREAM
#include <stdexcept> // runtime_error
#include <iostream> // cout
#include <sstream> // ostrstream, istrstream
#include <fstream>
#include <string.h>
// the general include for eo
#include <paradiseo/eo.h>
// declaration of the namespace
using namespace std;
//-----------------------------------------------------------------------------
// representation of solutions, and neighbors
#include <paradiseo/eo/ga/eoBit.h> // bit string : see also EO tutorial lesson 1: FirstBitGA.cpp
#include <paradiseo/mo/problems/bitString/moBitNeighbor.h> // neighbor of bit string
//-----------------------------------------------------------------------------
// fitness function, and evaluation of neighbors
#include <paradiseo/problems/eval/oneMaxEval.h>
#include <paradiseo/mo/problems/eval/moOneMaxIncrEval.h>
#include <paradiseo/mo/eval/moFullEvalByModif.h>
//-----------------------------------------------------------------------------
// neighborhood description
#include <paradiseo/mo/neighborhood/moOrderNeighborhood.h> // visit all neighbors in increasing order of bit index
//-----------------------------------------------------------------------------
// the continuator based on full eval number
#include <paradiseo/eo/eoEvalFuncCounter.h> // to import the fitness counter
#include <paradiseo/mo/continuator/moFullEvalContinuator.h>
//-----------------------------------------------------------------------------
// the simple Hill-Climbing local search
#include <paradiseo/mo/algo/moSimpleHC.h>
// Declaration of types
//-----------------------------------------------------------------------------
// Indi is the typedef of the solution type like in paradisEO-eo
typedef eoBit<unsigned int> Indi; // bit string with unsigned fitness type
// Neighbor is the typedef of the neighbor type,
// Neighbor = How to compute the neighbor from the solution + information on it (i.e. fitness)
// all classes from paradisEO-mo use this template type
typedef moBitNeighbor<unsigned int> Neighbor ; // bit string neighbor with unsigned fitness type
// Main function
//-----------------------------------------------------------------------------
void main_function(int argc, char **argv)
{
/* =========================================================
*
* Parameters from parser
*
* ========================================================= */
// more information on the input parameters: see EO tutorial lesson 3
// but don't care at first it just read the parameters of the bit string size and the random seed.
// First define a parser from the command-line arguments
eoParser parser(argc, argv);
// For each parameter, define Parameter, read it through the parser,
// and assign the value to the variable
// random seed parameter
eoValueParam<uint32_t> seedParam(time(0), "seed", "Random number seed", 'S');
parser.processParam( seedParam );
unsigned seed = seedParam.value();
// length of the bit string
eoValueParam<unsigned int> vecSizeParam(20, "vecSize", "Genotype size", 'V');
parser.processParam( vecSizeParam, "Representation" );
unsigned vecSize = vecSizeParam.value();
// maximum number of full evaluation
eoValueParam<unsigned int> evalParam(2, "fulleval", "Maximum number of full evaluation", 'e');
parser.processParam( evalParam, "Representation" );
unsigned fullevalMax = evalParam.value();
// the name of the "status" file where all actual parameter values will be saved
string str_status = parser.ProgramName() + ".status"; // default value
eoValueParam<string> statusParam(str_status.c_str(), "status", "Status file");
parser.processParam( statusParam, "Persistence" );
// do the following AFTER ALL PARAMETERS HAVE BEEN PROCESSED
// i.e. in case you need parameters somewhere else, postpone these
if (parser.userNeedsHelp()) {
parser.printHelp(cout);
exit(1);
}
if (statusParam.value() != "") {
ofstream os(statusParam.value().c_str());
os << parser;// and you can use that file as parameter file
}
/* =========================================================
*
* Random seed
*
* ========================================================= */
// reproducible random seed: if you don't change SEED above,
// you'll aways get the same result, NOT a random run
// more information: see EO tutorial lesson 1 (FirstBitGA.cpp)
rng.reseed(seed);
/* =========================================================
*
* Initialization of the solution
*
* ========================================================= */
// a Indi random initializer: each bit is random
// more information: see EO tutorial lesson 1 (FirstBitGA.cpp)
eoUniformGenerator<bool> uGen;
eoInitFixedLength<Indi> random(vecSize, uGen);
/* =========================================================
*
* Eval fitness function (full evaluation)
*
* ========================================================= */
// the fitness function is just the number of 1 in the bit string
oneMaxEval<Indi> fullEvalTmp;
// to count the number of full evaluation
eoEvalFuncCounter<Indi> fullEval(fullEvalTmp);
/* =========================================================
*
* evaluation of a neighbor solution
*
* ========================================================= */
// Use it if there is no incremental evaluation: a neighbor is evaluated by the full evaluation of a solution
// moFullEvalByModif<Neighbor> neighborEval(fullEval);
// Incremental evaluation of the neighbor: fitness is modified by +/- 1
moOneMaxIncrEval<Neighbor> neighborEval;
/* =========================================================
*
* the neighborhood of a solution
*
* ========================================================= */
// Exploration of the neighborhood in increasing order of the neigbor's index:
// bit-flip from bit 0 to bit (vecSize - 1)
moOrderNeighborhood<Neighbor> neighborhood(vecSize);
/* =========================================================
*
* the external continuators
*
* ========================================================= */
moFullEvalContinuator<Neighbor> continuator(fullEval, fullevalMax);
/* =========================================================
*
* the local search algorithm
*
* ========================================================= */
moSimpleHC<Neighbor> hc(neighborhood, fullEval, neighborEval, continuator);
/* =========================================================
*
* executes the local search from a random solution
*
* ========================================================= */
// The current solution
Indi solution;
// Apply random initialization
random(solution);
// Evaluation of the initial solution:
// can be evaluated here, or else it will be done at the beginning of the local search
fullEval(solution);
// Output: the intial solution
std::cout << "initial: " << solution << std::endl ;
// Apply the local search on the solution !
hc(solution);
// Output: the final solution
std::cout << "final: " << solution << std::endl ;
std::cout << "Number of full evaluations during the local search: " << continuator.value() << std::endl ;
}
// A main that catches the exceptions
int main(int argc, char **argv)
{
try {
main_function(argc, argv);
}
catch (exception& e) {
cout << "Exception: " << e.what() << '\n';
}
return 1;
}