MyStructEA.cpp

/*
Template for creating a new representation in EO
================================================

This is the template main file.
It includes all other files that have been generated by the script create.sh
so it is the only file to compile.

In case you want to build up a separate library for your new Evolving Object,
you'll need some work - follow what's done in the src/ga dir, used in the
main file BitEA in tutorial/Lesson4 dir.
Or you can wait until we do it :-)
*/

// Miscilaneous include and declaration 
#include <iostream>
using namespace std;

// eo general include
#include "eo"
// the real bounds (not yet in general eo include)
#include "utils/eoRealVectorBounds.h"

// include here whatever specific files for your representation
// Basically, this should include at least the following

#include "eoMyStruct.h"

#include "eoMyStructInit.h"

#include "eoMyStructEvalFunc.h"

// GENOTYPE   eoMyStruct ***MUST*** be templatized over the fitness

//*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*
// START fitness type: double or eoMaximizingFitness if you are maximizing
//                     eoMinimizingFitness if you are minimizing
typedef eoMinimizingFitness MyFitT ;    // type of fitness 
// END fitness type
//*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*-*

// Then define your EO objects using that fitness type
typedef eoMyStruct<MyFitT> Indi;      // ***MUST*** derive from EO 

// create an initializer
#include "make_genotype_MyStruct.h"
eoInit<Indi> & make_genotype(eoParser& _parser, eoState&_state, Indi _eo)
{
  return do_make_genotype(_parser, _state, _eo);
} 

// and the variation operaotrs
#include "make_op_MyStruct.h"
eoGenOp<Indi>&  make_op(eoParser& _parser, eoState& _state, eoInit<Indi>& _init)
{
  return do_make_op(_parser, _state, _init);
}

// Use existing modules to define representation independent routines
// These are parser-based definitions of objects

// how to initialize the population 
// it IS representation independent if an eoInit is given
#include <do/make_pop.h>
eoPop<Indi >&  make_pop(eoParser& _parser, eoState& _state, eoInit<Indi> & _init)
{
  return do_make_pop(_parser, _state, _init);
}

// the stopping criterion
#include <do/make_continue.h>
eoContinue<Indi>& make_continue(eoParser& _parser, eoState& _state, eoEvalFuncCounter<Indi> & _eval)
{
  return do_make_continue(_parser, _state, _eval);
}

// outputs (stats, population dumps, ...)
#include <do/make_checkpoint.h>
eoCheckPoint<Indi>& make_checkpoint(eoParser& _parser, eoState& _state, eoEvalFuncCounter<Indi>& _eval, eoContinue<Indi>& _continue) 
{
  return do_make_checkpoint(_parser, _state, _eval, _continue);
}

// evolution engine (selection and replacement)
#include <do/make_algo_scalar.h>
eoAlgo<Indi>&  make_algo_scalar(eoParser& _parser, eoState& _state, eoEvalFunc<Indi>& _eval, eoContinue<Indi>& _continue, eoGenOp<Indi>& _op)
{
  return do_make_algo_scalar(_parser, _state, _eval, _continue, _op);
}

// simple call to the algo. stays there for consistency reasons 
// no template for that one
#include <do/make_run.h>
// the instanciating fitnesses
#include <eoScalarFitness.h>
void run_ea(eoAlgo<Indi>& _ga, eoPop<Indi>& _pop)
{
  do_run(_ga, _pop);
}

// checks for help demand, and writes the status file
// and make_help; in libutils
void make_help(eoParser & _parser);

// now use all of the above, + representation dependent things
int main(int argc, char* argv[])
{

  try
  {
  eoParser parser(argc, argv);  // for user-parameter reading

  eoState state;    // keeps all things allocated

    // The fitness
   eoMyStructEvalFunc<Indi> plainEval/* (varType  _anyVariable) */;
   // turn that object into an evaluation counter
   eoEvalFuncCounter<Indi> eval(plainEval);

  // the genotype - through a genotype initializer
  eoInit<Indi>& init = make_genotype(parser, state, Indi());

  // Build the variation operator (any seq/prop construct)
  eoGenOp<Indi>& op = make_op(parser, state, init);


  //
  // YOU SHOULD NOT NEED TO MODIFY ANYTHING BEYOND THIS POINT
  // unless you want to add specific statistics to the checkpoint

  // initialize the population
  // yes, this is representation indepedent once you have an eoInit
  eoPop<Indi>& pop   = make_pop(parser, state, init);

  // stopping criteria
  eoContinue<Indi> & term = make_continue(parser, state, eval);
  // output
  eoCheckPoint<Indi> & checkpoint = make_checkpoint(parser, state, eval, term);
  // algorithm (need the operator!)
  eoAlgo<Indi>& ga = make_algo_scalar(parser, state, eval, checkpoint, op);


  // to be called AFTER all parameters have been read!!!
  make_help(parser);

  // evaluate intial population AFTER help and status in case it takes time
  apply<Indi>(eval, pop);
  // if you want to print it out
//   cout << "Initial Population\n";
//   pop.sortedPrintOn(cout);
//   cout << endl;

  run_ea(ga, pop); // run the ga

  cout << "Final Population\n";
  pop.sortedPrintOn(cout);
  cout << endl;

  }
  catch(exception& e)
  {
    cout << e.what() << endl;
  }
  return 0;
}

---