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tutorial PEO modified

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git-svn-id: svn://scm.gforge.inria.fr/svnroot/paradiseo@905 331e1502-861f-0410-8da2-ba01fb791d7f
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canape 2008-01-24 14:57:07 +00:00
commit f4740e571c
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95
trunk/paradiseo-peo/tutorial/Wrapper/CMakeLists.txt
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######################################################################################
### 0) Set the compiler and define targets to easily run the lessons
######################################################################################
SET (CMAKE_CXX_COMPILER mpicxx)
ADD_CUSTOM_TARGET(install DEPENDS ${ParadisEO-PEO_SOURCE_DIR}/tutorial/Wrapper/param ${ParadisEO-PEO_SOURCE_DIR}/tutorial/Wrapper/schema.xml)
ADD_CUSTOM_COMMAND(
TARGET install
POST_BUILD
COMMAND ${CMAKE_COMMAND}
ARGS -E copy_if_different
${ParadisEO-PEO_SOURCE_DIR}/tutorial/Wrapper/param
${ParadisEO-PEO_BINARY_DIR}/tutorial/Wrapper)
ADD_CUSTOM_COMMAND(
TARGET install
POST_BUILD
COMMAND ${CMAKE_COMMAND}
ARGS -E copy_if_different
${ParadisEO-PEO_SOURCE_DIR}/tutorial/Wrapper/schema.xml
${ParadisEO-PEO_BINARY_DIR}/tutorial/Wrapper)
######################################################################################
######################################################################################
### 1) Include the sources
######################################################################################
INCLUDE_DIRECTORIES(${EO_SRC_DIR}/src ${MOEO_SRC_DIR}/src ${MO_SRC_DIR}/src ${ParadisEO-PEO_SOURCE_DIR}/src ${TSP_SRC_DIR})
######################################################################################
######################################################################################
### 2) Specify where CMake can find the libraries (mandatory: before 3) )
######################################################################################
IF(NOT WIN32 OR CYGWIN)
LINK_DIRECTORIES(${EO_BIN_DIR}/lib ${MOEO_BIN_DIR}/lib ${ParadisEO-PEO_BINARY_DIR}/lib ${TSP_BINARY_DIR}/lib)
ENDIF(NOT WIN32 OR CYGWIN)
# especially for Visual Studio
IF(WIN32 AND NOT CYGWIN)
LINK_DIRECTORIES(${EO_BIN_DIR}\\lib\\${CMAKE_BUILD_TYPE} ${ParadisEO-PEO_BINARY_DIR}\\lib\\${CMAKE_BUILD_TYPE} ${TSP_BINARY_DIR}\\lib\\${CMAKE_BUILD_TYPE})
ENDIF(WIN32 AND NOT CYGWIN)
######################################################################################
######################################################################################
### 3) Define your target(s): just an executable here
######################################################################################
ADD_EXECUTABLE(example1 main1.cpp)
ADD_DEPENDENCIES(example1 peo rmc_mpi)
ADD_EXECUTABLE(example2 main2.cpp)
ADD_DEPENDENCIES(example2 peo rmc_mpi)
ADD_EXECUTABLE(example3 main3.cpp)
ADD_DEPENDENCIES(example3 peo rmc_mpi)
ADD_EXECUTABLE(example4 main4.cpp)
ADD_DEPENDENCIES(example4 peo rmc_mpi)
ADD_EXECUTABLE(example5 main5.cpp)
ADD_DEPENDENCIES(example5 tsp peo rmc_mpi)
ADD_EXECUTABLE(example6 main6.cpp)
ADD_DEPENDENCIES(example6 tsp peo rmc_mpi)
ADD_EXECUTABLE(example7 main7.cpp)
ADD_DEPENDENCIES(example7 peo rmc_mpi)
######################################################################################
######################################################################################
### 4) Optionnal: define your target(s)'s version: no effect for windows
######################################################################################
######################################################################################
######################################################################################
### 5) Link the librairies
######################################################################################
TARGET_LINK_LIBRARIES(example1 ${XML2_LIBS} peo rmc_mpi eo eoutils)
TARGET_LINK_LIBRARIES(example2 ${XML2_LIBS} peo rmc_mpi eo eoutils)
TARGET_LINK_LIBRARIES(example3 ${XML2_LIBS} peo rmc_mpi eo eoutils)
TARGET_LINK_LIBRARIES(example4 ${XML2_LIBS} peo rmc_mpi eo eoutils)
TARGET_LINK_LIBRARIES(example5 ${XML2_LIBS} tsp peo rmc_mpi eo eoutils)
TARGET_LINK_LIBRARIES(example6 ${XML2_LIBS} tsp peo rmc_mpi eo eoutils)
TARGET_LINK_LIBRARIES(example7 ${XML2_LIBS} tsp peo rmc_mpi eo eoutils)
######################################################################################

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trunk/paradiseo-peo/tutorial/Wrapper/main1.cpp
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#include <peo>
#include <es.h>
typedef eoReal<double> Indi;
double f (const Indi & _indi)
{
double sum;
sum=_indi[1]-pow(_indi[0],2);
sum=100*pow(sum,2);
sum+=pow((1-_indi[0]),2);
return (-sum);
}
int main( int __argc, char** __argv )
{
peo :: init( __argc, __argv );
// Parameters
const unsigned int VEC_SIZE = 2;
const unsigned int POP_SIZE = 20;
const unsigned int MAX_GEN = 300;
const double INIT_POSITION_MIN = -2.0;
const double INIT_POSITION_MAX = 2.0;
const float CROSS_RATE = 0.8;
const double EPSILON = 0.01;
const float MUT_RATE = 0.3;
rng.reseed (time(0));
// Algorithm
eoGenContinue < Indi > genContPara (MAX_GEN);
eoCombinedContinue <Indi> continuatorPara (genContPara);
eoCheckPoint<Indi> checkpoint(continuatorPara);
peoEvalFunc<Indi> mainEval( f );
peoPopEval <Indi> eval(mainEval);
eoUniformGenerator < double >uGen (INIT_POSITION_MIN, INIT_POSITION_MAX);
eoInitFixedLength < Indi > random (VEC_SIZE, uGen);
eoRankingSelect<Indi> selectionStrategy;
eoSelectNumber<Indi> select(selectionStrategy,POP_SIZE);
eoSegmentCrossover<Indi> crossover;
eoUniformMutation<Indi> mutation(EPSILON);
eoSGATransform<Indi> transform(crossover,CROSS_RATE,mutation,MUT_RATE);
eoPlusReplacement<Indi> replace;
eoEasyEA< Indi > eaAlg( checkpoint, eval, select, transform, replace );
// Population
eoPop < Indi > pop;
pop.append (POP_SIZE, random);
// Wrapper
peoWrapper parallelEA( eaAlg, pop);
eval.setOwner(parallelEA);
peo :: run();
peo :: finalize();
if (getNodeRank()==1)
{
pop.sort();
std::cout << "Final population :\n" << pop << std::endl;
}
}

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trunk/paradiseo-peo/tutorial/Wrapper/main2.cpp
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#include <peo>
#include <es.h>
typedef eoReal<double> Indi;
double f (const Indi & _indi)
{
double sum;
sum=_indi[1]-pow(_indi[0],2);
sum=100*pow(sum,2);
sum+=pow((1-_indi[0]),2);
return (-sum);
}
int main( int __argc, char** __argv )
{
peo :: init( __argc, __argv );
// Parameters
const unsigned int VEC_SIZE = 2;
const unsigned int POP_SIZE = 20;
const unsigned int MAX_GEN = 300;
const double INIT_POSITION_MIN = -2.0;
const double INIT_POSITION_MAX = 2.0;
const float CROSS_RATE = 0.8;
const double EPSILON = 0.01;
const float MUT_RATE = 0.5;
const unsigned MIG_FREQ = 10;
const unsigned int MIG_SIZE = 5;
rng.reseed (time(0));
RingTopology topology;
// Algorithm
eoGenContinue < Indi > genContPara (MAX_GEN);
eoCombinedContinue <Indi> continuatorPara (genContPara);
eoCheckPoint<Indi> checkpoint(continuatorPara);
peoEvalFunc<Indi> mainEval( f );
peoPopEval <Indi> eval(mainEval);
eoUniformGenerator < double >uGen (INIT_POSITION_MIN, INIT_POSITION_MAX);
eoInitFixedLength < Indi > random (VEC_SIZE, uGen);
eoRankingSelect<Indi> selectionStrategy;
eoSelectNumber<Indi> select(selectionStrategy,POP_SIZE);
eoSegmentCrossover<Indi> crossover;
eoUniformMutation<Indi> mutation(EPSILON);
peoTransform<Indi> transform(crossover,CROSS_RATE,mutation,MUT_RATE);
peoPop < Indi > pop;
pop.append (POP_SIZE, random);
eoPlusReplacement<Indi> replace;
eoRandomSelect<Indi> mig_select_one;
eoSelector <Indi, peoPop<Indi> > mig_select (mig_select_one,MIG_SIZE,pop);
eoReplace <Indi, peoPop<Indi> > mig_replace (replace,pop);
peoSyncIslandMig<Indi, peoPop<Indi> > mig(MIG_FREQ,mig_select,mig_replace,topology,pop,pop);
checkpoint.add(mig);
eoEasyEA< Indi > eaAlg( checkpoint, eval, select, transform, replace );
// Algorithm
eoGenContinue < Indi > genContPara2 (MAX_GEN);
eoCombinedContinue <Indi> continuatorPara2 (genContPara2);
eoCheckPoint<Indi> checkpoint2(continuatorPara2);
peoEvalFunc<Indi> mainEval2( f );
peoPopEval <Indi> eval2(mainEval2);
eoUniformGenerator < double >uGen2 (INIT_POSITION_MIN, INIT_POSITION_MAX);
eoInitFixedLength < Indi > random2 (VEC_SIZE, uGen2);
eoRankingSelect<Indi> selectionStrategy2;
eoSelectNumber<Indi> select2(selectionStrategy2,POP_SIZE);
eoSegmentCrossover<Indi> crossover2;
eoUniformMutation<Indi> mutation2(EPSILON);
peoTransform<Indi> transform2(crossover2,CROSS_RATE,mutation2,MUT_RATE);
peoPop < Indi > pop2;
pop2.append (POP_SIZE, random2);
eoPlusReplacement<Indi> replace2;
eoRandomSelect<Indi> mig_select_one2;
eoSelector <Indi, peoPop<Indi> > mig_select2 (mig_select_one2,MIG_SIZE,pop2);
eoReplace <Indi, peoPop<Indi> > mig_replace2 (replace2,pop2);
peoSyncIslandMig<Indi, peoPop<Indi> > mig2(MIG_FREQ,mig_select2,mig_replace2,topology,pop2,pop2);
checkpoint2.add(mig2);
eoEasyEA< Indi > eaAlg2( checkpoint2, eval2, select2, transform2, replace2 );
peoWrapper parallelEA( eaAlg, pop);
eval.setOwner(parallelEA);
transform.setOwner(parallelEA);
mig.setOwner(parallelEA);
peoWrapper parallelEA2( eaAlg2, pop2);
eval2.setOwner(parallelEA2);
transform2.setOwner(parallelEA2);
mig2.setOwner(parallelEA2);
peo :: run();
peo :: finalize();
if (getNodeRank()==1)
{
pop.sort();
std::cout << "Final population :\n" << pop << std::endl;
}
}

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trunk/paradiseo-peo/tutorial/Wrapper/main3.cpp
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#include <peo>
#include <es.h>
typedef eoRealParticle < double >Indi;
double f (const Indi & _indi)
{
double sum;
sum=_indi[1]-pow(_indi[0],2);
sum=100*pow(sum,2);
sum+=pow((1-_indi[0]),2);
return (-sum);
}
int main( int __argc, char** __argv )
{
peo :: init( __argc, __argv );
const unsigned int VEC_SIZE = 2;
const unsigned int POP_SIZE = 20;
const unsigned int NEIGHBORHOOD_SIZE= 6;
const unsigned int MAX_GEN = 300;
const double INIT_POSITION_MIN = -2.0;
const double INIT_POSITION_MAX = 2.0;
const double INIT_VELOCITY_MIN = -1.;
const double INIT_VELOCITY_MAX = 1.;
const double weight = 1;
const double C1 = 0.5;
const double C2 = 2.;
rng.reseed (time(0));
eoGenContinue < Indi > genContPara (MAX_GEN);
eoCombinedContinue <Indi> continuatorPara (genContPara);
eoCheckPoint<Indi> checkpoint(continuatorPara);
peoEvalFunc<Indi, double, const Indi& > plainEval(f);
peoPopEval< Indi > eval(plainEval);
eoUniformGenerator < double >uGen (INIT_POSITION_MIN, INIT_POSITION_MAX);
eoInitFixedLength < Indi > random (VEC_SIZE, uGen);
eoUniformGenerator < double >sGen (INIT_VELOCITY_MIN, INIT_VELOCITY_MAX);
eoVelocityInitFixedLength < Indi > veloRandom (VEC_SIZE, sGen);
eoFirstIsBestInit < Indi > localInit;
eoRealVectorBounds bndsFlight(VEC_SIZE,INIT_POSITION_MIN,INIT_POSITION_MAX);
eoStandardFlight < Indi > flight(bndsFlight);
eoPop < Indi > pop;
pop.append (POP_SIZE, random);
eoLinearTopology<Indi> topology(NEIGHBORHOOD_SIZE);
eoRealVectorBounds bnds(VEC_SIZE,INIT_VELOCITY_MIN,INIT_VELOCITY_MAX);
eoStandardVelocity < Indi > velocity (topology,weight,C1,C2,bnds);
eoInitializer <Indi> init(eval,veloRandom,localInit,topology,pop);
// Parallel algorithm
eoSyncEasyPSO <Indi> psa(init,checkpoint,eval, velocity, flight);
peoWrapper parallelPSO( psa, pop);
eval.setOwner(parallelPSO);
peo :: run();
peo :: finalize();
if (getNodeRank()==1)
{
pop.sort();
std::cout << "Final population :\n" << pop << std::endl;
}
}

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trunk/paradiseo-peo/tutorial/Wrapper/main4.cpp
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#include <peo>
#include <es.h>
typedef eoRealParticle < double >Indi;
double f (const Indi & _indi)
{
double sum;
sum=_indi[1]-pow(_indi[0],2);
sum=100*pow(sum,2);
sum+=pow((1-_indi[0]),2);
return (-sum);
}
int main( int __argc, char** __argv )
{
peo :: init( __argc, __argv );
const unsigned int VEC_SIZE = 2;
const unsigned int POP_SIZE = 20;
const unsigned int NEIGHBORHOOD_SIZE= 6;
const unsigned int MAX_GEN = 100;
const double INIT_POSITION_MIN = -2.0;
const double INIT_POSITION_MAX = 2.0;
const double INIT_VELOCITY_MIN = -1.;
const double INIT_VELOCITY_MAX = 1.;
const unsigned int MIG_FREQ = 10;
const double omega = 1;
const double C1 = 0.5;
const double C2 = 2.;
rng.reseed (time(0));
// Island model
RingTopology topologyMig;
// First
eoGenContinue < Indi > genContPara (MAX_GEN);
eoCombinedContinue <Indi> continuatorPara (genContPara);
eoCheckPoint<Indi> checkpoint(continuatorPara);
peoEvalFunc<Indi, double, const Indi& > plainEval(f);
peoPopEval< Indi > eval(plainEval);
eoUniformGenerator < double >uGen (INIT_POSITION_MIN, INIT_POSITION_MAX);
eoInitFixedLength < Indi > random (VEC_SIZE, uGen);
eoUniformGenerator < double >sGen (INIT_VELOCITY_MIN, INIT_VELOCITY_MAX);
eoVelocityInitFixedLength < Indi > veloRandom (VEC_SIZE, sGen);
eoFirstIsBestInit < Indi > localInit;
eoRealVectorBounds bndsFlight(VEC_SIZE,INIT_POSITION_MIN,INIT_POSITION_MAX);
eoStandardFlight < Indi > flight(bndsFlight);
peoPop < Indi > pop;
pop.append (POP_SIZE, random);
eoLinearTopology<Indi> topology(NEIGHBORHOOD_SIZE);
eoRealVectorBounds bnds(VEC_SIZE,INIT_VELOCITY_MIN,INIT_VELOCITY_MAX);
eoStandardVelocity < Indi > velocity (topology,omega,C1,C2,bnds);
eoInitializer <Indi> init(eval,veloRandom,localInit,topology,pop);
// Island model
eoPeriodicContinue< Indi > mig_cont( MIG_FREQ );
peoPSOSelect<Indi> mig_selec(topology);
peoWorstPositionReplacement<Indi> mig_replac;
// Specific implementation (peoData.h)
eoContinuator<Indi> cont(mig_cont, pop);
eoSelector <Indi, peoPop<Indi> > mig_select (mig_selec,1,pop);
eoReplace <Indi, peoPop<Indi> > mig_replace (mig_replac,pop);
// Second
eoGenContinue < Indi > genContPara2 (MAX_GEN);
eoCombinedContinue <Indi> continuatorPara2 (genContPara2);
eoCheckPoint<Indi> checkpoint2(continuatorPara2);
peoEvalFunc<Indi, double, const Indi& > plainEval2(f);
peoPopEval< Indi > eval2(plainEval2);
eoUniformGenerator < double >uGen2 (INIT_POSITION_MIN, INIT_POSITION_MAX);
eoInitFixedLength < Indi > random2 (VEC_SIZE, uGen2);
eoUniformGenerator < double >sGen2 (INIT_VELOCITY_MIN, INIT_VELOCITY_MAX);
eoVelocityInitFixedLength < Indi > veloRandom2 (VEC_SIZE, sGen2);
eoFirstIsBestInit < Indi > localInit2;
eoRealVectorBounds bndsFlight2(VEC_SIZE,INIT_POSITION_MIN,INIT_POSITION_MAX);
eoStandardFlight < Indi > flight2(bndsFlight2);
peoPop < Indi > pop2;
pop2.append (POP_SIZE, random2);
eoLinearTopology<Indi> topology2(NEIGHBORHOOD_SIZE);
eoRealVectorBounds bnds2(VEC_SIZE,INIT_VELOCITY_MIN,INIT_VELOCITY_MAX);
eoStandardVelocity < Indi > velocity2 (topology2,omega,C1,C2,bnds2);
eoInitializer <Indi> init2(eval2,veloRandom2,localInit2,topology2,pop2);
// Island model
eoPeriodicContinue< Indi > mig_cont2( MIG_FREQ );
peoPSOSelect<Indi> mig_selec2(topology2);
peoWorstPositionReplacement<Indi> mig_replac2;
// Specific implementation (peoData.h)
eoContinuator<Indi> cont2(mig_cont2,pop2);
eoSelector <Indi, peoPop<Indi> > mig_select2 (mig_selec2,1,pop2);
eoReplace <Indi, peoPop<Indi> > mig_replace2 (mig_replac2,pop2);
// Island model
peoAsyncIslandMig< Indi, peoPop<Indi> > mig(cont,mig_select, mig_replace, topologyMig, pop, pop);
checkpoint.add( mig );
peoAsyncIslandMig< Indi, peoPop<Indi> > mig2(cont2,mig_select2, mig_replace2, topologyMig, pop2, pop2);
checkpoint2.add( mig2 );
// Parallel algorithm
eoSyncEasyPSO <Indi> psa(init,checkpoint,eval, velocity, flight);
peoWrapper parallelPSO( psa, pop);
eval.setOwner(parallelPSO);
mig.setOwner(parallelPSO);
eoSyncEasyPSO <Indi> psa2(init2,checkpoint2,eval2, velocity2, flight2);
peoWrapper parallelPSO2( psa2, pop2);
eval2.setOwner(parallelPSO2);
mig2.setOwner(parallelPSO2);
peo :: run();
peo :: finalize();
if (getNodeRank()==1)
{
pop.sort();
pop2.sort();
std::cout << "Final population :\n" << pop << std::endl;
std::cout << "Final population :\n" << pop2 << std::endl;
}
}

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trunk/paradiseo-peo/tutorial/Wrapper/main5.cpp
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#include "param.h"
#include "route_init.h"
#include "route_eval.h"
#include "order_xover.h"
#include "edge_xover.h"
#include "partial_mapped_xover.h"
#include "city_swap.h"
#include "part_route_eval.h"
#include "merge_route_eval.h"
#include "two_opt_init.h"
#include "two_opt_next.h"
#include "two_opt_incr_eval.h"
#include <peo>
#define POP_SIZE 10
#define NUM_GEN 100
#define CROSS_RATE 1.0
#define MUT_RATE 0.01
int main (int __argc, char * * __argv)
{
peo :: init (__argc, __argv);
loadParameters (__argc, __argv);
RouteInit route_init;
RouteEval full_eval;
OrderXover order_cross;
PartialMappedXover pm_cross;
EdgeXover edge_cross;
CitySwap city_swap_mut;
// Initialization of the local search
TwoOptInit pmx_two_opt_init;
TwoOptNext pmx_two_opt_next;
TwoOptIncrEval pmx_two_opt_incr_eval;
moBestImprSelect <TwoOpt> pmx_two_opt_move_select;
moHC <TwoOpt> hc (pmx_two_opt_init, pmx_two_opt_next, pmx_two_opt_incr_eval, pmx_two_opt_move_select, full_eval);
// EA
eoPop <Route> pop (POP_SIZE, route_init);
eoGenContinue <Route> cont (NUM_GEN);
eoCheckPoint <Route> checkpoint (cont);
eoEvalFuncCounter< Route > eval(full_eval);
eoStochTournamentSelect <Route> select_one;
eoSelectNumber <Route> select (select_one, POP_SIZE);
eoSGATransform <Route> transform (order_cross, CROSS_RATE, city_swap_mut, MUT_RATE);
eoEPReplacement <Route> replace (2);
eoEasyEA< Route > eaAlg( checkpoint, eval, select, transform, replace );
peoWrapper parallelEA( eaAlg, pop);
peo :: run ();
peo :: finalize ();
if (getNodeRank()==1)
{
pop.sort();
std :: cout << "\nResult before the local search\n";
for(unsigned i=0;i<pop.size();i++)
std::cout<<"\n"<<pop[i].fitness();
}
// Local search
peo :: init (__argc, __argv);
peoMultiStart <Route> initParallelHC (hc);
peoWrapper parallelHC (initParallelHC, pop);
initParallelHC.setOwner(parallelHC);
peo :: run( );
peo :: finalize( );
if (getNodeRank()==1)
{
std :: cout << "\nResult after the local search\n";
pop.sort();
for(unsigned i=0;i<pop.size();i++)
std::cout<<"\n"<<pop[i].fitness();
}
}

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trunk/paradiseo-peo/tutorial/Wrapper/main6.cpp
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#include "param.h"
#include "route_init.h"
#include "route_eval.h"
#include "order_xover.h"
#include "edge_xover.h"
#include "partial_mapped_xover.h"
#include "city_swap.h"
#include "part_route_eval.h"
#include "merge_route_eval.h"
#include "two_opt_init.h"
#include "two_opt_next.h"
#include "two_opt_incr_eval.h"
#include <peo>
#define POP_SIZE 10
#define NUM_GEN 200
#define CROSS_RATE 1.0
#define MUT_RATE 0.1
int main (int __argc, char * * __argv)
{
peo :: init (__argc, __argv);
loadParameters (__argc, __argv);
RouteInit route_init;
RouteEval full_eval;
OrderXover order_cross;
PartialMappedXover pm_cross;
EdgeXover edge_cross;
CitySwap city_swap_mut;
// Local search
TwoOptInit pmx_two_opt_init;
TwoOptNext pmx_two_opt_next;
TwoOptIncrEval pmx_two_opt_incr_eval;
moBestImprSelect <TwoOpt> pmx_two_opt_move_select;
moHC <TwoOpt> hc (pmx_two_opt_init, pmx_two_opt_next, pmx_two_opt_incr_eval, pmx_two_opt_move_select, full_eval);
eoPop <Route> pop (POP_SIZE, route_init);
peoMultiStart <Route> initParallelHC (hc);
peoWrapper parallelHC (initParallelHC, pop);
initParallelHC.setOwner(parallelHC);
peo :: run( );
peo :: finalize( );
if (getNodeRank()==1)
{
std :: cout << "\nResult before the EA\n";
pop.sort();
for(unsigned i=0;i<pop.size();i++)
std::cout<<"\n"<<pop[i].fitness();
std :: cout << "\n\n";
}
// EA
peo :: init (__argc, __argv);
eoGenContinue <Route> cont (NUM_GEN);
eoCheckPoint <Route> checkpoint (cont);
eoEvalFuncCounter< Route > eval(full_eval);
eoStochTournamentSelect <Route> select_one;
eoSelectNumber <Route> select (select_one, POP_SIZE);
eoSGATransform <Route> transform (order_cross, CROSS_RATE, city_swap_mut, MUT_RATE);
eoEPReplacement <Route> replace (2);
eoEasyEA< Route > eaAlg( checkpoint, eval, select, transform, replace );
peoWrapper parallelEA( eaAlg, pop);
peo :: run ();
peo :: finalize ();
if (getNodeRank()==1)
{
std :: cout << "\nResult after the EA\n";
pop.sort();
for(unsigned i=0;i<pop.size();i++)
std::cout<<"\n"<<pop[i].fitness();
std :: cout << "\n\n";
}
}

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trunk/paradiseo-peo/tutorial/Wrapper/main7.cpp
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#include <peo>
#include <es.h>
typedef eoRealParticle < double >Indi;
double f (const Indi & _indi)
{
double sum;
sum=_indi[1]-pow(_indi[0],2);
sum=100*pow(sum,2);
sum+=pow((1-_indi[0]),2);
return (-sum);
}
template <class EOT>
class eoResizerInit: public eoInit<EOT>
{
public:
typedef typename EOT::AtomType AtomType;
eoResizerInit(unsigned _size)
: size(_size){}
virtual void operator()(EOT& chrom)
{
chrom.resize(size);
chrom.invalidate();
}
private :
unsigned size;
};
int main( int __argc, char** __argv )
{
peo :: init( __argc, __argv );
const unsigned int VEC_SIZE = 2;
const unsigned int POP_SIZE = 20;
const unsigned int NEIGHBORHOOD_SIZE= 6;
const unsigned int MAX_GEN = 300;
const double INIT_POSITION_MIN = -2.0;
const double INIT_POSITION_MAX = 2.0;
const double INIT_VELOCITY_MIN = -1.;
const double INIT_VELOCITY_MAX = 1.;
const double omega = 1;
const double C1 = 0.5;
const double C2 = 2.;
rng.reseed (time(0));
eoGenContinue < Indi > genContPara (MAX_GEN);
eoCombinedContinue <Indi> continuatorPara (genContPara);
eoCheckPoint<Indi> checkpoint(continuatorPara);
eoUniformGenerator < double >uGen (INIT_POSITION_MIN, INIT_POSITION_MAX);
eoUniformGenerator < double >sGen (INIT_VELOCITY_MIN, INIT_VELOCITY_MAX);
eoVelocityInitFixedLength < Indi > veloRandom (VEC_SIZE, sGen);
eoFirstIsBestInit < Indi > localInit;
eoRealVectorBounds bndsFlight(VEC_SIZE,INIT_POSITION_MIN,INIT_POSITION_MAX);
eoStandardFlight < Indi > flight(bndsFlight);
eoLinearTopology<Indi> topology(NEIGHBORHOOD_SIZE);
eoRealVectorBounds bnds(VEC_SIZE,INIT_VELOCITY_MIN,INIT_VELOCITY_MAX);
eoStandardVelocity < Indi > velocity (topology,omega,C1,C2,bnds);
eoResizerInit<Indi> sizeInit(VEC_SIZE);
// need at least a size initialization
eoPop < Indi > pop(POP_SIZE,sizeInit);
eoInitFixedLength < Indi > randomSeq (VEC_SIZE, uGen);
peoMultiStart <Indi> initRandom (randomSeq);
peoWrapper random (initRandom,pop);
initRandom.setOwner(random);
peo :: run( );
peo :: finalize( );
// Parallel algorithm
peo :: init (__argc, __argv);
peoEvalFunc<Indi, double, const Indi& > plainEval(f);
peoPopEval< Indi > eval(plainEval);
eoInitializer <Indi> init(eval,veloRandom,localInit,topology,pop);
eoSyncEasyPSO <Indi> psa(init,checkpoint,eval, velocity, flight);
peoWrapper parallelPSO( psa, pop);
eval.setOwner(parallelPSO);
peo :: run();
peo :: finalize();
if (getNodeRank()==1)
{
pop.sort();
std::cout << "Final population :\n" << pop << std::endl;
}
}

12
trunk/paradiseo-peo/tutorial/Wrapper/param
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@ -1,12 +0,0 @@
## miscallenous parameters
--debug=false
## deployment schema
--schema=schema.xml
## parameters
--inst=../examples/tsp/benchs/eil101.tsp

16
trunk/paradiseo-peo/tutorial/Wrapper/schema.xml
View file

@ -1,16 +0,0 @@
<?xml version="1.0"?>
<schema>
<group scheduler="0">
<node name="0" num_workers="0">
</node>
<node name="1" num_workers="0">
<runner>1</runner>
<runner>2</runner>
</node>
<node name="2" num_workers="1">
</node>
<node name="3" num_workers="1">
</node>
</group>
</schema>