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add the Eigen library implementations of normal distributions computations

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nojhan 2012-07-09 18:47:35 +02:00
commit f3e1562a14
5 changed files with 301 additions and 106 deletions
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40
edo/src/utils/edoStatNormalMulti.h
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@ -28,16 +28,24 @@ Authors:
#ifndef _edoStatNormalMulti_h
#define _edoStatNormalMulti_h
#include <boost/numeric/ublas/io.hpp>
#include<sstream>
#include "edoStat.h"
#include "edoNormalMulti.h"
#ifdef WITH_BOOST
//! edoStatNormalMulti< EOT >
#include <boost/numeric/ublas/io.hpp>
#else
#ifdef WITH_EIGEN
// include nothing
#endif // WITH_EIGEN
#endif // WITH_BOOST
//! edoStatNormalMulti< EOT >
template < typename EOT >
class edoStatNormalMulti : public edoDistribStat< edoNormalMulti< EOT > >
{
@ -47,34 +55,28 @@ public:
using edoDistribStat< edoNormalMulti< EOT > >::value;
edoStatNormalMulti( std::string desc = "" )
: edoDistribStat< edoNormalMulti< EOT > >( desc )
: edoDistribStat< edoNormalMulti< EOT > >( desc )
{}
void operator()( const edoNormalMulti< EOT >& distrib )
{
value() = "\n# ====== multi normal distribution dump =====\n";
value() = "\n# ====== multi normal distribution dump =====\n";
std::ostringstream os;
std::ostringstream os;
os << distrib.mean() << " " << distrib.varcovar() << std::endl;
os << distrib.mean() << " " << distrib.varcovar() << std::endl;
// ublas::vector< AtomType > mean = distrib.mean();
// std::copy(mean.begin(), mean.end(), std::ostream_iterator< std::string >( os, " " ));
// ublas::vector< AtomType > mean = distrib.mean();
// std::copy(mean.begin(), mean.end(), std::ostream_iterator< std::string >( os, " " ));
// ublas::symmetric_matrix< AtomType, ublas::lower > varcovar = distrib.varcovar();
// std::copy(varcovar.begin(), varcovar.end(), std::ostream_iterator< std::string >( os, " " ));
// ublas::symmetric_matrix< AtomType, ublas::lower > varcovar = distrib.varcovar();
// std::copy(varcovar.begin(), varcovar.end(), std::ostream_iterator< std::string >( os, " " ));
// os << std::endl;
// os << std::endl;
value() += os.str();
value() += os.str();
}
};
#else
#ifdef WITH_EIGEN
#endif // WITH_EIGEN
#endif // WITH_BOOST
#endif // !_edoStatNormalMulti_h