Paradiseo-eo sources added
git-svn-id: svn://scm.gforge.inria.fr/svnroot/paradiseo@40 331e1502-861f-0410-8da2-ba01fb791d7f
This commit is contained in:
legrand
parent
bc1f453978
commit
c3aec878e5
3609 changed files with 342772 additions and 0 deletions
169
trunk/paradiseo-eo/doc/latex/classeo_es_chrom_init.tex
Normal file
169
trunk/paradiseo-eo/doc/latex/classeo_es_chrom_init.tex
Normal file
|
|
@ -0,0 +1,169 @@
|
|||
\section{eo\-Es\-Chrom\-Init$<$ EOT $>$ Class Template Reference}
|
||||
\label{classeo_es_chrom_init}\index{eoEsChromInit@{eoEsChromInit}}
|
||||
Random Es-chromosome initializer (therefore derived from {\bf eo\-Init}{\rm (p.\,\pageref{classeo_init})}).
|
||||
|
||||
|
||||
{\tt \#include $<$eo\-Es\-Chrom\-Init.h$>$}
|
||||
|
||||
Inheritance diagram for eo\-Es\-Chrom\-Init$<$ EOT $>$::\begin{figure}[H]
|
||||
\begin{center}
|
||||
\leavevmode
|
||||
\includegraphics[height=5cm]{classeo_es_chrom_init}
|
||||
\end{center}
|
||||
\end{figure}
|
||||
\subsection*{Public Types}
|
||||
\begin{CompactItemize}
|
||||
\item
|
||||
typedef EOT::Fitness {\bf Fit\-T}\label{classeo_es_chrom_init_w0}
|
||||
|
||||
\end{CompactItemize}
|
||||
\subsection*{Public Member Functions}
|
||||
\begin{CompactItemize}
|
||||
\item
|
||||
{\bf eo\-Es\-Chrom\-Init} ({\bf eo\-Real\-Vector\-Bounds} \&\_\-bounds, double \_\-sigma=0.3, bool \_\-to\_\-scale=false)
|
||||
\begin{CompactList}\small\item\em Constructor. \item\end{CompactList}\item
|
||||
{\bf eo\-Es\-Chrom\-Init} ({\bf eo\-Real\-Vector\-Bounds} \&\_\-bounds, std::vector$<$ double $>$ \_\-vec\-Sigma)
|
||||
\begin{CompactList}\small\item\em Constructor. \item\end{CompactList}\item
|
||||
void {\bf operator()} ({\bf EOT} \&\_\-eo)\label{classeo_es_chrom_init_a2}
|
||||
|
||||
\begin{CompactList}\small\item\em simply passes the argument to the uniform method of the bounds \item\end{CompactList}\end{CompactItemize}
|
||||
\subsection*{Private Member Functions}
|
||||
\begin{CompactItemize}
|
||||
\item
|
||||
void {\bf create\_\-self\_\-adapt} ({\bf eo\-Real}$<$ Fit\-T $>$ \&)
|
||||
\begin{CompactList}\small\item\em Create intializer. \item\end{CompactList}\item
|
||||
void {\bf create\_\-self\_\-adapt} ({\bf eo\-Es\-Simple}$<$ Fit\-T $>$ \&result)
|
||||
\begin{CompactList}\small\item\em Create intializer. \item\end{CompactList}\item
|
||||
void {\bf create\_\-self\_\-adapt} ({\bf eo\-Es\-Stdev}$<$ Fit\-T $>$ \&result)
|
||||
\begin{CompactList}\small\item\em Create intializer. \item\end{CompactList}\item
|
||||
void {\bf create\_\-self\_\-adapt} ({\bf eo\-Es\-Full}$<$ Fit\-T $>$ \&result)
|
||||
\begin{CompactList}\small\item\em Create intializer. \item\end{CompactList}\end{CompactItemize}
|
||||
\subsection*{Private Attributes}
|
||||
\begin{CompactItemize}
|
||||
\item
|
||||
double {\bf unique\-Sigma}\label{classeo_es_chrom_init_r0}
|
||||
|
||||
\begin{CompactList}\small\item\em Initial value in case of a unique sigma. \item\end{CompactList}\item
|
||||
std::vector$<$ double $>$ {\bf vec\-Sigma}\label{classeo_es_chrom_init_r1}
|
||||
|
||||
\begin{CompactList}\small\item\em Initial values in case of a vector of sigmas. \item\end{CompactList}\end{CompactItemize}
|
||||
|
||||
|
||||
\subsection{Detailed Description}
|
||||
\subsubsection*{template$<$class EOT$>$ class eo\-Es\-Chrom\-Init$<$ EOT $>$}
|
||||
|
||||
Random Es-chromosome initializer (therefore derived from {\bf eo\-Init}{\rm (p.\,\pageref{classeo_init})}).
|
||||
|
||||
This class can initialize four types of real-valued genotypes thanks to tempate specialization of private method create:
|
||||
|
||||
\begin{itemize}
|
||||
\item {\bf eo\-Real}{\rm (p.\,\pageref{classeo_real})} just an eo\-Vector$<$double$>$\item {\bf eo\-Es\-Simple}{\rm (p.\,\pageref{classeo_es_simple})} + one self-adapting single sigma for all variables\item {\bf eo\-Es\-Stdev}{\rm (p.\,\pageref{classeo_es_stdev})} a whole std::vector of self-adapting sigmas\item {\bf eo\-Es\-Full}{\rm (p.\,\pageref{classeo_es_full})} a full self-adapting correlation matrix\end{itemize}
|
||||
|
||||
|
||||
\begin{Desc}
|
||||
\item[See also:]{\bf eo\-Real}{\rm (p.\,\pageref{classeo_real})} {\bf eo\-Es\-Simple}{\rm (p.\,\pageref{classeo_es_simple})} {\bf eo\-Es\-Stdev}{\rm (p.\,\pageref{classeo_es_stdev})} {\bf eo\-Es\-Full}{\rm (p.\,\pageref{classeo_es_full})} {\bf eo\-Init}{\rm (p.\,\pageref{classeo_init})} \end{Desc}
|
||||
|
||||
|
||||
|
||||
|
||||
Definition at line 55 of file eo\-Es\-Chrom\-Init.h.
|
||||
|
||||
\subsection{Constructor \& Destructor Documentation}
|
||||
\index{eoEsChromInit@{eo\-Es\-Chrom\-Init}!eoEsChromInit@{eoEsChromInit}}
|
||||
\index{eoEsChromInit@{eoEsChromInit}!eoEsChromInit@{eo\-Es\-Chrom\-Init}}
|
||||
\subsubsection{\setlength{\rightskip}{0pt plus 5cm}template$<$class EOT$>$ {\bf eo\-Es\-Chrom\-Init}$<$ {\bf EOT} $>$::{\bf eo\-Es\-Chrom\-Init} ({\bf eo\-Real\-Vector\-Bounds} \& {\em \_\-bounds}, double {\em \_\-sigma} = {\tt 0.3}, bool {\em \_\-to\_\-scale} = {\tt false})\hspace{0.3cm}{\tt [inline]}}\label{classeo_es_chrom_init_a0}
|
||||
|
||||
|
||||
Constructor.
|
||||
|
||||
\begin{Desc}
|
||||
\item[Parameters:]
|
||||
\begin{description}
|
||||
\item[{\em \_\-bounds}]bounds for uniform initialization \item[{\em \_\-sigma}]initial value for the stddev \item[{\em \_\-to\_\-scale}]wether sigma should be multiplied by the range of each variable added December 2004 - MS (together with the whole comment :-) \end{description}
|
||||
\end{Desc}
|
||||
|
||||
|
||||
Definition at line 71 of file eo\-Es\-Chrom\-Init.h.
|
||||
|
||||
References eo\-Real\-Base\-Vector\-Bounds::range(), eo\-Real\-Init\-Bounded$<$ EOT $>$::the\-Bounds(), eo\-Es\-Chrom\-Init$<$ EOT $>$::unique\-Sigma, and eo\-Es\-Chrom\-Init$<$ EOT $>$::vec\-Sigma.\index{eoEsChromInit@{eo\-Es\-Chrom\-Init}!eoEsChromInit@{eoEsChromInit}}
|
||||
\index{eoEsChromInit@{eoEsChromInit}!eoEsChromInit@{eo\-Es\-Chrom\-Init}}
|
||||
\subsubsection{\setlength{\rightskip}{0pt plus 5cm}template$<$class EOT$>$ {\bf eo\-Es\-Chrom\-Init}$<$ {\bf EOT} $>$::{\bf eo\-Es\-Chrom\-Init} ({\bf eo\-Real\-Vector\-Bounds} \& {\em \_\-bounds}, std::vector$<$ double $>$ {\em \_\-vec\-Sigma})\hspace{0.3cm}{\tt [inline]}}\label{classeo_es_chrom_init_a1}
|
||||
|
||||
|
||||
Constructor.
|
||||
|
||||
This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
|
||||
|
||||
Specify individual initial sigmas for each variable.
|
||||
|
||||
\begin{Desc}
|
||||
\item[Parameters:]
|
||||
\begin{description}
|
||||
\item[{\em \_\-bounds}]bounds for uniform initialization \item[{\em \_\-sigma}]initial value for the stddev \end{description}
|
||||
\end{Desc}
|
||||
|
||||
|
||||
Definition at line 109 of file eo\-Es\-Chrom\-Init.h.
|
||||
|
||||
References eo\-Es\-Chrom\-Init$<$ EOT $>$::unique\-Sigma, and eo\-Es\-Chrom\-Init$<$ EOT $>$::vec\-Sigma.
|
||||
|
||||
\subsection{Member Function Documentation}
|
||||
\index{eoEsChromInit@{eo\-Es\-Chrom\-Init}!create_self_adapt@{create\_\-self\_\-adapt}}
|
||||
\index{create_self_adapt@{create\_\-self\_\-adapt}!eoEsChromInit@{eo\-Es\-Chrom\-Init}}
|
||||
\subsubsection{\setlength{\rightskip}{0pt plus 5cm}template$<$class EOT$>$ void {\bf eo\-Es\-Chrom\-Init}$<$ {\bf EOT} $>$::create\_\-self\_\-adapt ({\bf eo\-Real}$<$ Fit\-T $>$ \&)\hspace{0.3cm}{\tt [inline, private]}}\label{classeo_es_chrom_init_d0}
|
||||
|
||||
|
||||
Create intializer.
|
||||
|
||||
No adaptive mutation at all
|
||||
|
||||
Definition at line 128 of file eo\-Es\-Chrom\-Init.h.
|
||||
|
||||
Referenced by eo\-Es\-Chrom\-Init$<$ EOT $>$::operator()().\index{eoEsChromInit@{eo\-Es\-Chrom\-Init}!create_self_adapt@{create\_\-self\_\-adapt}}
|
||||
\index{create_self_adapt@{create\_\-self\_\-adapt}!eoEsChromInit@{eo\-Es\-Chrom\-Init}}
|
||||
\subsubsection{\setlength{\rightskip}{0pt plus 5cm}template$<$class EOT$>$ void {\bf eo\-Es\-Chrom\-Init}$<$ {\bf EOT} $>$::create\_\-self\_\-adapt ({\bf eo\-Es\-Simple}$<$ Fit\-T $>$ \& {\em result})\hspace{0.3cm}{\tt [inline, private]}}\label{classeo_es_chrom_init_d1}
|
||||
|
||||
|
||||
Create intializer.
|
||||
|
||||
This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
|
||||
|
||||
Adaptive mutation through a unique sigma
|
||||
|
||||
Definition at line 139 of file eo\-Es\-Chrom\-Init.h.
|
||||
|
||||
References eo\-Es\-Simple$<$ Fit $>$::stdev.\index{eoEsChromInit@{eo\-Es\-Chrom\-Init}!create_self_adapt@{create\_\-self\_\-adapt}}
|
||||
\index{create_self_adapt@{create\_\-self\_\-adapt}!eoEsChromInit@{eo\-Es\-Chrom\-Init}}
|
||||
\subsubsection{\setlength{\rightskip}{0pt plus 5cm}template$<$class EOT$>$ void {\bf eo\-Es\-Chrom\-Init}$<$ {\bf EOT} $>$::create\_\-self\_\-adapt ({\bf eo\-Es\-Stdev}$<$ Fit\-T $>$ \& {\em result})\hspace{0.3cm}{\tt [inline, private]}}\label{classeo_es_chrom_init_d2}
|
||||
|
||||
|
||||
Create intializer.
|
||||
|
||||
This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
|
||||
|
||||
Adaptive mutation through a std::vector of sigmas
|
||||
|
||||
\begin{Desc}
|
||||
\item[{\bf Todo}]Should we scale sigmas to the corresponding object variable range? \end{Desc}
|
||||
|
||||
|
||||
Definition at line 155 of file eo\-Es\-Chrom\-Init.h.
|
||||
|
||||
References eo\-Es\-Stdev$<$ Fit $>$::stdevs.\index{eoEsChromInit@{eo\-Es\-Chrom\-Init}!create_self_adapt@{create\_\-self\_\-adapt}}
|
||||
\index{create_self_adapt@{create\_\-self\_\-adapt}!eoEsChromInit@{eo\-Es\-Chrom\-Init}}
|
||||
\subsubsection{\setlength{\rightskip}{0pt plus 5cm}template$<$class EOT$>$ void {\bf eo\-Es\-Chrom\-Init}$<$ {\bf EOT} $>$::create\_\-self\_\-adapt ({\bf eo\-Es\-Full}$<$ Fit\-T $>$ \& {\em result})\hspace{0.3cm}{\tt [inline, private]}}\label{classeo_es_chrom_init_d3}
|
||||
|
||||
|
||||
Create intializer.
|
||||
|
||||
This is an overloaded member function, provided for convenience. It differs from the above function only in what argument(s) it accepts.
|
||||
|
||||
Adaptive mutation through a whole correlation matrix
|
||||
|
||||
Definition at line 169 of file eo\-Es\-Chrom\-Init.h.
|
||||
|
||||
References eo\-Es\-Full$<$ Fit $>$::correlations, eo\-Es\-Full$<$ Fit $>$::stdevs, and eo\-Rng::uniform().
|
||||
|
||||
The documentation for this class was generated from the following file:\begin{CompactItemize}
|
||||
\item
|
||||
eo\-Es\-Chrom\-Init.h\end{CompactItemize}
|
||||
Loading…
Add table
Add a link
Reference in a new issue