Paradiseo-eo sources added

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<h1>eoVirus.h</h1><div class="fragment"><pre class="fragment">00001 <span class="comment">/* eoVirus.h</span>
00002 <span class="comment"></span>
00003 <span class="comment">(c) GeNeura Team 2001, Marc Schoenauer 2000</span>
00004 <span class="comment"></span>
00005 <span class="comment">This library is free software; you can redistribute it and/or modify</span>
00006 <span class="comment">it under the terms of the GNU Lesser General Public License as</span>
00007 <span class="comment">published by the Free Software Foundation; either version 2 of the</span>
00008 <span class="comment">License, or (at your option) any later version.</span>
00009 <span class="comment"></span>
00010 <span class="comment">This library is distributed in the hope that it will be useful, but</span>
00011 <span class="comment">WITHOUT ANY WARRANTY; without even the implied warranty of</span>
00012 <span class="comment">MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU</span>
00013 <span class="comment">Lesser General Public License for more details.</span>
00014 <span class="comment"></span>
00015 <span class="comment">You should have received a copy of the GNU Lesser General Public</span>
00016 <span class="comment">License along with this library; if not, write to the Free Software</span>
00017 <span class="comment">Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307</span>
00018 <span class="comment">USA</span>
00019 <span class="comment"></span>
00020 <span class="comment">Contact: todos@geneura.ugr.es, http://geneura.ugr.es</span>
00021 <span class="comment"> Marc.Schoenauer@polytechnique.fr</span>
00022 <span class="comment">*/</span>
00023
00024
00025 <span class="preprocessor">#ifndef eoVirus_h</span>
00026 <span class="preprocessor"></span><span class="preprocessor">#define eoVirus_h</span>
00027 <span class="preprocessor"></span>
00028 <span class="preprocessor">#include &lt;iostream&gt;</span>
00029 <span class="preprocessor">#include &lt;functional&gt;</span>
00030 <span class="preprocessor">#include &lt;string&gt;</span>
00031 <span class="preprocessor">#include &lt;vector&gt;</span>
00032
00033 <span class="preprocessor">#include "ga/eoBit.h"</span>
00034
00048 <span class="keyword">template</span> &lt;<span class="keyword">class</span> FitT&gt;
00049 <span class="keyword">class </span>eoVirus : <span class="keyword">public</span> <a class="code" href="classeo_bit.html">eoBit</a>&lt;FitT&gt;
00050 {
00051 <span class="keyword">public</span>:
00052
00053 <span class="keyword">using</span> <a class="code" href="classeo_bit.html">eoBit&lt;FitT&gt;</a>::begin;
00054 <span class="keyword">using</span> <a class="code" href="classeo_bit.html">eoBit&lt;FitT&gt;</a>::end;
00055 <span class="keyword">using</span> <a class="code" href="classeo_bit.html">eoBit&lt;FitT&gt;</a>::size;
00056
00057
00062 eoVirus(<span class="keywordtype">unsigned</span> _size = 0, <span class="keywordtype">bool</span> _value = <span class="keyword">false</span>, <span class="keywordtype">bool</span> _virValue = <span class="keyword">false</span>):
00063 <a class="code" href="classeo_bit.html">eoBit</a>&lt;<a class="code" href="classeo_scalar_fitness.html">FitT</a>&gt;(_size, _value), virus( _size, _virValue) {}
00064
00066 <span class="keyword">virtual</span> std::string <a class="code" href="classeo_bit.html#a1">className</a>()<span class="keyword"> const </span>{
00067 <span class="keywordflow">return</span> <span class="stringliteral">"eoVirus"</span>;
00068 }
00069
00071 <span class="keywordtype">void</span> virResize( <span class="keywordtype">unsigned</span> _i ) {
00072 virus.resize(_i );
00073 }
00074
00076 <span class="keywordtype">bool</span> virusBit( <span class="keywordtype">unsigned</span> _i )<span class="keyword"> const </span>{
00077 <span class="keywordflow">return</span> virus[_i];
00078 }
00079
00081 <span class="keywordtype">void</span> virusBitSet( <span class="keywordtype">unsigned</span> _i, <span class="keywordtype">bool</span> _bit ) {
00082 virus[_i ] = _bit;
00083 }
00084
00089 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classeo_bit.html#a2">printOn</a>(std::ostream&amp; os)<span class="keyword"> const </span>{
00090 <a class="code" href="class_e_o.html#z10_2">EO&lt;FitT&gt;::printOn</a>(os);
00091 os &lt;&lt; <span class="charliteral">' '</span>;
00092 os &lt;&lt; size() &lt;&lt; <span class="charliteral">' '</span>;
00093 std::copy(begin(), end(), std::ostream_iterator&lt;bool&gt;(os));
00094 std::cout &lt;&lt; std::endl;
00095 std::copy(virus.begin(), virus.end(), std::ostream_iterator&lt;bool&gt;(os));
00096 }
00097
00102 <span class="keyword">virtual</span> <span class="keywordtype">void</span> <a class="code" href="classeo_bit.html#a3">readFrom</a>(std::istream&amp; is){
00103 <a class="code" href="classeo_bit.html#a3">eoBit&lt;FitT&gt;::readFrom</a>(is);
00104 <span class="keywordtype">unsigned</span> s;
00105 is &gt;&gt; s;
00106 std::string bits;
00107 is &gt;&gt; bits;
00108 <span class="keywordflow">if</span> (is) {
00109 virus.resize(bits.size());
00110 std::transform(bits.begin(), bits.end(), virus.begin(),
00111 std::bind2nd(std::equal_to&lt;char&gt;(), <span class="charliteral">'1'</span>));
00112 }
00113 }
00114
00115
00116 <span class="keyword">private</span>:
00117
00118 std::vector&lt;bool&gt; virus;
00119 };
00120
00121 <span class="comment">//-----------------------------------------------------------------------------</span>
00122
00123 <span class="preprocessor">#endif //eoBit_h</span>
00124 <span class="preprocessor"></span>
00125
00126 <span class="comment">// Local Variables:</span>
00127 <span class="comment">// coding: iso-8859-1</span>
00128 <span class="comment">// mode: C++</span>
00129 <span class="comment">// c-file-style: "Stroustrup"</span>
00130 <span class="comment">// End:</span>
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