git-svn-id: svn://scm.gforge.inria.fr/svnroot/paradiseo@130 331e1502-861f-0410-8da2-ba01fb791d7f

This commit is contained in:
atantar 2006-12-30 14:10:44 +00:00
commit a6fe42664b
743 changed files with 67629 additions and 0 deletions

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EXTRA_DIST = paradiseo-peo-lns.doxyfile foot.html
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`xml2-config --libs`
tspExample_LDADD = -lparadiseo -lrmc_mpi -leoutils -leo -ltsp_shared

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// -*- mode: c++; c-indent-level: 4; c++-member-init-indent: 8; comment-column: 35; -*-
// "main_ga.cpp"
// (c) OPAC Team, LIFL, January 2006
/* This library is free software; you can redistribute it and/or
modify it under the terms of the GNU Lesser General Public
License as published by the Free Software Foundation; either
version 2 of the License, or (at your option) any later version.
This library is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: paradiseo-help@lists.gforge.inria.fr
*/
#include "param.h"
#include "route_init.h"
#include "route_eval.h"
#include "order_xover.h"
#include "edge_xover.h"
#include "partial_mapped_xover.h"
#include "city_swap.h"
#include "part_route_eval.h"
#include "merge_route_eval.h"
#include "two_opt_init.h"
#include "two_opt_next.h"
#include "two_opt_incr_eval.h"
#include <paradiseo>
#define POP_SIZE 10
#define NUM_GEN 100
#define CROSS_RATE 1.0
#define MUT_RATE 0.01
#define NUM_PART_EVALS 2
#define MIG_FREQ 10
#define MIG_SIZE 10
#define HYBRID_SIZE 3
int main (int __argc, char * * __argv) {
peo :: init (__argc, __argv);
loadParameters (__argc, __argv); /* Processing some parameters relative to the tackled
problem (TSP) */
RouteInit route_init; /* Its builds random routes */
RouteEval full_eval; /* Full route evaluator */
MergeRouteEval merge_eval;
std :: vector <eoEvalFunc <Route> *> part_eval;
for (unsigned i = 1 ; i <= NUM_PART_EVALS ; i ++)
part_eval.push_back (new PartRouteEval ((float) (i - 1) / NUM_PART_EVALS, (float) i / NUM_PART_EVALS));
OrderXover order_cross; /* Recombination */
PartialMappedXover pm_cross;
EdgeXover edge_cross;
CitySwap city_swap_mut; /* Mutation */
RingTopology topo;
/** The first EA **/
eoPop <Route> ox_pop (POP_SIZE, route_init); /* Population */
eoGenContinue <Route> ox_cont (NUM_GEN); /* A fixed number of iterations */
eoCheckPoint <Route> ox_checkpoint (ox_cont); /* Checkpoint */
peoParaPopEval <Route> ox_pop_eval (part_eval, merge_eval);
eoStochTournamentSelect <Route> ox_select_one;
eoSelectNumber <Route> ox_select (ox_select_one, POP_SIZE);
eoSGATransform <Route> ox_transform (order_cross, CROSS_RATE, city_swap_mut, MUT_RATE);
peoSeqTransform <Route> ox_para_transform (ox_transform);
eoEPReplacement <Route> ox_replace (2);
/* The migration policy */
eoPeriodicContinue <Route> ox_mig_cont (MIG_FREQ); /* Migration occurs periodically */
eoRandomSelect <Route> ox_mig_select_one; /* Emigrants are randomly selected */
eoSelectNumber <Route> ox_mig_select (ox_mig_select_one, MIG_SIZE);
eoPlusReplacement <Route> ox_mig_replace; /* Immigrants replace the worse individuals */
peoAsyncIslandMig <Route> ox_mig (ox_mig_cont, ox_mig_select, ox_mig_replace, topo, ox_pop, ox_pop);
//peoSyncIslandMig <Route> ox_mig (MIG_FREQ, ox_mig_select, ox_mig_replace, topo, ox_pop, ox_pop);
ox_checkpoint.add (ox_mig);
peoEA <Route> ox_ea (ox_checkpoint, ox_pop_eval, ox_select, ox_para_transform, ox_replace);
ox_mig.setOwner (ox_ea);
ox_ea (ox_pop); /* Application to the given population */
/** The second EA **/
eoPop <Route> pmx_pop (POP_SIZE, route_init); /* Population */
eoGenContinue <Route> pmx_cont (NUM_GEN); /* A fixed number of iterations */
eoCheckPoint <Route> pmx_checkpoint (pmx_cont); /* Checkpoint */
peoSeqPopEval <Route> pmx_pop_eval (full_eval);
eoRankingSelect <Route> pmx_select_one;
eoSelectNumber <Route> pmx_select (pmx_select_one, POP_SIZE);
eoSGATransform <Route> pmx_transform (pm_cross, CROSS_RATE, city_swap_mut, MUT_RATE);
peoSeqTransform <Route> pmx_para_transform (pmx_transform);
eoPlusReplacement <Route> pmx_replace;
/* The migration policy */
eoPeriodicContinue <Route> pmx_mig_cont (MIG_FREQ); /* Migration occurs periodically */
eoRandomSelect <Route> pmx_mig_select_one; /* Emigrants are randomly selected */
eoSelectNumber <Route> pmx_mig_select (pmx_mig_select_one, MIG_SIZE);
eoPlusReplacement <Route> pmx_mig_replace; /* Immigrants replace the worse individuals */
peoAsyncIslandMig <Route> pmx_mig (pmx_mig_cont, pmx_mig_select, pmx_mig_replace, topo, pmx_pop, pmx_pop);
//peoSyncIslandMig <Route> pmx_mig (MIG_FREQ, pmx_mig_select, pmx_mig_replace, topo, pmx_pop, pmx_pop);
pmx_checkpoint.add (pmx_mig);
/* Hybridization with a Local Search */
TwoOptInit pmx_two_opt_init;
TwoOptNext pmx_two_opt_next;
TwoOptIncrEval pmx_two_opt_incr_eval;
moBestImprSelect <TwoOpt> pmx_two_opt_move_select;
moHC <TwoOpt> hc (pmx_two_opt_init, pmx_two_opt_next, pmx_two_opt_incr_eval, pmx_two_opt_move_select, full_eval);
eoPeriodicContinue <Route> pmx_ls_cont (MIG_FREQ); /* Hybridization occurs periodically */
eoRandomSelect <Route> pmx_ls_select_one; /* ? */
eoSelectNumber <Route> pmx_ls_select (pmx_ls_select_one, HYBRID_SIZE);
eoPlusReplacement <Route> pmx_ls_replace;
peoSyncMultiStart <Route> pmx_ls (pmx_ls_cont, pmx_ls_select, pmx_ls_replace, hc, pmx_pop);
pmx_checkpoint.add (pmx_ls);
peoEA <Route> pmx_ea (pmx_checkpoint, pmx_pop_eval, pmx_select, pmx_para_transform, pmx_replace);
pmx_mig.setOwner (pmx_ea);
pmx_ls.setOwner (pmx_ea);
pmx_ea (pmx_pop); /* Application to the given population */
/** The third EA **/
eoPop <Route> edge_pop (POP_SIZE, route_init); /* Population */
eoGenContinue <Route> edge_cont (NUM_GEN); /* A fixed number of iterations */
eoCheckPoint <Route> edge_checkpoint (edge_cont); /* Checkpoint */
peoSeqPopEval <Route> edge_pop_eval (full_eval);
eoRankingSelect <Route> edge_select_one;
eoSelectNumber <Route> edge_select (edge_select_one, POP_SIZE);
peoParaSGATransform <Route> edge_para_transform (edge_cross, CROSS_RATE, city_swap_mut, MUT_RATE);
eoPlusReplacement <Route> edge_replace;
/* The migration policy */
eoPeriodicContinue <Route> edge_mig_cont (MIG_FREQ); /* Migration occurs periodically */
eoRandomSelect <Route> edge_mig_select_one; /* Emigrants are randomly selected */
eoSelectNumber <Route> edge_mig_select (edge_mig_select_one, MIG_SIZE);
eoPlusReplacement <Route> edge_mig_replace; /* Immigrants replace the worse individuals */
peoAsyncIslandMig <Route> edge_mig (edge_mig_cont, edge_mig_select, edge_mig_replace, topo, edge_pop, edge_pop);
//peoSyncIslandMig <Route> edge_mig (MIG_FREQ, edge_mig_select, edge_mig_replace, topo, edge_pop, edge_pop);
edge_checkpoint.add (edge_mig);
peoEA <Route> edge_ea (edge_checkpoint, edge_pop_eval, edge_select, edge_para_transform, edge_replace);
edge_mig.setOwner (edge_ea);
edge_ea (edge_pop); /* Application to the given population */
peo :: run ();
peo :: finalize (); /* Termination */
return 0;
}

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# Doxyfile 1.4.7
#---------------------------------------------------------------------------
# Project related configuration options
#---------------------------------------------------------------------------
PROJECT_NAME = "ParadisEO-PEO Lesson2"
PROJECT_NUMBER = 0.1
OUTPUT_DIRECTORY = ../../docs/html/lesson2
CREATE_SUBDIRS = NO
OUTPUT_LANGUAGE = English
USE_WINDOWS_ENCODING = NO
BRIEF_MEMBER_DESC = YES
REPEAT_BRIEF = YES
ABBREVIATE_BRIEF = "The $name class" \
"The $name widget" \
"The $name file" \
is \
provides \
specifies \
contains \
represents \
a \
an \
the
ALWAYS_DETAILED_SEC = NO
INLINE_INHERITED_MEMB = NO
FULL_PATH_NAMES = NO
STRIP_FROM_PATH =
STRIP_FROM_INC_PATH =
SHORT_NAMES = NO
JAVADOC_AUTOBRIEF = YES
MULTILINE_CPP_IS_BRIEF = NO
DETAILS_AT_TOP = NO
INHERIT_DOCS = YES
SEPARATE_MEMBER_PAGES = NO
TAB_SIZE = 8
ALIASES =
OPTIMIZE_OUTPUT_FOR_C = NO
OPTIMIZE_OUTPUT_JAVA = NO
BUILTIN_STL_SUPPORT = NO
DISTRIBUTE_GROUP_DOC = NO
SUBGROUPING = YES
#---------------------------------------------------------------------------
# Build related configuration options
#---------------------------------------------------------------------------
EXTRACT_ALL = NO
EXTRACT_PRIVATE = YES
EXTRACT_STATIC = YES
EXTRACT_LOCAL_CLASSES = YES
EXTRACT_LOCAL_METHODS = NO
HIDE_UNDOC_MEMBERS = YES
HIDE_UNDOC_CLASSES = YES
HIDE_FRIEND_COMPOUNDS = NO
HIDE_IN_BODY_DOCS = NO
INTERNAL_DOCS = NO
CASE_SENSE_NAMES = YES
HIDE_SCOPE_NAMES = NO
SHOW_INCLUDE_FILES = YES
INLINE_INFO = YES
SORT_MEMBER_DOCS = NO
SORT_BRIEF_DOCS = NO
SORT_BY_SCOPE_NAME = NO
GENERATE_TODOLIST = YES
GENERATE_TESTLIST = YES
GENERATE_BUGLIST = YES
GENERATE_DEPRECATEDLIST= YES
ENABLED_SECTIONS =
MAX_INITIALIZER_LINES = 30
SHOW_USED_FILES = YES
SHOW_DIRECTORIES = NO
FILE_VERSION_FILTER =
#---------------------------------------------------------------------------
# configuration options related to warning and progress messages
#---------------------------------------------------------------------------
QUIET = YES
WARNINGS = YES
WARN_IF_UNDOCUMENTED = YES
WARN_IF_DOC_ERROR = YES
WARN_NO_PARAMDOC = NO
WARN_FORMAT = "$file:$line: $text"
WARN_LOGFILE =
#---------------------------------------------------------------------------
# configuration options related to the input files
#---------------------------------------------------------------------------
INPUT = .
FILE_PATTERNS = *.cpp \
*.h \
NEWS \
README
RECURSIVE = YES
EXCLUDE =
EXCLUDE_SYMLINKS = NO
EXCLUDE_PATTERNS =
EXAMPLE_PATH =
EXAMPLE_PATTERNS = *
EXAMPLE_RECURSIVE = NO
IMAGE_PATH =
INPUT_FILTER =
FILTER_PATTERNS =
FILTER_SOURCE_FILES = NO
#---------------------------------------------------------------------------
# configuration options related to source browsing
#---------------------------------------------------------------------------
SOURCE_BROWSER = YES
INLINE_SOURCES = NO
STRIP_CODE_COMMENTS = YES
REFERENCED_BY_RELATION = YES
REFERENCES_RELATION = YES
REFERENCES_LINK_SOURCE = YES
USE_HTAGS = NO
VERBATIM_HEADERS = YES
#---------------------------------------------------------------------------
# configuration options related to the alphabetical class index
#---------------------------------------------------------------------------
ALPHABETICAL_INDEX = YES
COLS_IN_ALPHA_INDEX = 3
IGNORE_PREFIX = peo
#---------------------------------------------------------------------------
# configuration options related to the HTML output
#---------------------------------------------------------------------------
GENERATE_HTML = YES
HTML_OUTPUT = html
HTML_FILE_EXTENSION = .html
HTML_HEADER =
HTML_FOOTER =
HTML_STYLESHEET =
HTML_ALIGN_MEMBERS = YES
GENERATE_HTMLHELP = NO
CHM_FILE =
HHC_LOCATION =
GENERATE_CHI = NO
BINARY_TOC = NO
TOC_EXPAND = NO
DISABLE_INDEX = NO
ENUM_VALUES_PER_LINE = 4
GENERATE_TREEVIEW = YES
TREEVIEW_WIDTH = 250
#---------------------------------------------------------------------------
# configuration options related to the LaTeX output
#---------------------------------------------------------------------------
GENERATE_LATEX = YES
LATEX_OUTPUT = latex
LATEX_CMD_NAME = latex
MAKEINDEX_CMD_NAME = makeindex
COMPACT_LATEX = NO
PAPER_TYPE = a4wide
EXTRA_PACKAGES =
LATEX_HEADER =
PDF_HYPERLINKS = YES
USE_PDFLATEX = YES
LATEX_BATCHMODE = NO
LATEX_HIDE_INDICES = NO
#---------------------------------------------------------------------------
# configuration options related to the RTF output
#---------------------------------------------------------------------------
GENERATE_RTF = NO
RTF_OUTPUT = rtf
COMPACT_RTF = NO
RTF_HYPERLINKS = NO
RTF_STYLESHEET_FILE =
RTF_EXTENSIONS_FILE =
#---------------------------------------------------------------------------
# configuration options related to the man page output
#---------------------------------------------------------------------------
GENERATE_MAN = YES
MAN_OUTPUT = man
MAN_EXTENSION = .3
MAN_LINKS = NO
#---------------------------------------------------------------------------
# configuration options related to the XML output
#---------------------------------------------------------------------------
GENERATE_XML = NO
XML_OUTPUT = xml
XML_SCHEMA =
XML_DTD =
XML_PROGRAMLISTING = YES
#---------------------------------------------------------------------------
# configuration options for the AutoGen Definitions output
#---------------------------------------------------------------------------
GENERATE_AUTOGEN_DEF = NO
#---------------------------------------------------------------------------
# configuration options related to the Perl module output
#---------------------------------------------------------------------------
GENERATE_PERLMOD = NO
PERLMOD_LATEX = NO
PERLMOD_PRETTY = YES
PERLMOD_MAKEVAR_PREFIX =
#---------------------------------------------------------------------------
# Configuration options related to the preprocessor
#---------------------------------------------------------------------------
ENABLE_PREPROCESSING = YES
MACRO_EXPANSION = NO
EXPAND_ONLY_PREDEF = NO
SEARCH_INCLUDES = YES
INCLUDE_PATH =
INCLUDE_FILE_PATTERNS =
PREDEFINED =
EXPAND_AS_DEFINED =
SKIP_FUNCTION_MACROS = YES
#---------------------------------------------------------------------------
# Configuration::additions related to external references
#---------------------------------------------------------------------------
TAGFILES = ../../../paradiseo-mo/docs/eo.doxytag=../../../../../paradiseo-mo/docs/html \
../../../paradiseo-mo/docs/mo.doxytag=../../../../../paradiseo-mo/docs/html \
../../docs/paradiseo-peo.doxytag=../../ \
../shared/paradiseo-peo-lsn-shared.doxytag=../../lsnshared/html
GENERATE_TAGFILE = ../../docs/paradiseo-peo-lsn.doxytag
ALLEXTERNALS = NO
EXTERNAL_GROUPS = YES
PERL_PATH = /usr/bin/perl
#---------------------------------------------------------------------------
# Configuration options related to the dot tool
#---------------------------------------------------------------------------
CLASS_DIAGRAMS = YES
HIDE_UNDOC_RELATIONS = YES
HAVE_DOT = NO
CLASS_GRAPH = YES
COLLABORATION_GRAPH = YES
GROUP_GRAPHS = YES
UML_LOOK = NO
TEMPLATE_RELATIONS = NO
INCLUDE_GRAPH = YES
INCLUDED_BY_GRAPH = YES
CALL_GRAPH = NO
CALLER_GRAPH = NO
GRAPHICAL_HIERARCHY = YES
DIRECTORY_GRAPH = YES
DOT_IMAGE_FORMAT = png
DOT_PATH =
DOTFILE_DIRS =
MAX_DOT_GRAPH_WIDTH = 1024
MAX_DOT_GRAPH_HEIGHT = 1024
MAX_DOT_GRAPH_DEPTH = 0
DOT_TRANSPARENT = NO
DOT_MULTI_TARGETS = NO
GENERATE_LEGEND = YES
DOT_CLEANUP = YES
#---------------------------------------------------------------------------
# Configuration::additions related to the search engine
#---------------------------------------------------------------------------
SEARCHENGINE = YES