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delete copy of PazradisEO-GPU

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git-svn-id: svn://scm.gforge.inria.fr/svnroot/paradiseo@2188 331e1502-861f-0410-8da2-ba01fb791d7f
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boufaras 2011-03-14 13:20:19 +00:00
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11
branches/ParadisEO-GPU/ParadisEO-GPU/.project
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<?xml version="1.0" encoding="UTF-8"?>
<projectDescription>
<name>ParadisEO-GPU</name>
<comment></comment>
<projects>
</projects>
<buildSpec>
</buildSpec>
<natures>
</natures>
</projectDescription>

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branches/ParadisEO-GPU/ParadisEO-GPU/AUTHORS
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Authors:
Boufaras Karima
Thé Van Luong

1263
branches/ParadisEO-GPU/ParadisEO-GPU/CMake/cuda/FindCUDA.cmake
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branches/ParadisEO-GPU/ParadisEO-GPU/CMake/cuda/FindCUDA/make2cmake.cmake
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# James Bigler, NVIDIA Corp (nvidia.com - jbigler)
# Abe Stephens, SCI Institute -- http://www.sci.utah.edu/~abe/FindCuda.html
#
# Copyright (c) 2008 - 2009 NVIDIA Corporation. All rights reserved.
#
# Copyright (c) 2007-2009
# Scientific Computing and Imaging Institute, University of Utah
#
# This code is licensed under the MIT License. See the FindCUDA.cmake script
# for the text of the license.
# The MIT License
#
# License for the specific language governing rights and limitations under
# Permission is hereby granted, free of charge, to any person obtaining a
# copy of this software and associated documentation files (the "Software"),
# to deal in the Software without restriction, including without limitation
# the rights to use, copy, modify, merge, publish, distribute, sublicense,
# and/or sell copies of the Software, and to permit persons to whom the
# Software is furnished to do so, subject to the following conditions:
#
# The above copyright notice and this permission notice shall be included
# in all copies or substantial portions of the Software.
#
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
# OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
# THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
# FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
# DEALINGS IN THE SOFTWARE.
#
#######################################################################
# This converts a file written in makefile syntax into one that can be included
# by CMake.
file(READ ${input_file} depend_text)
if (${depend_text} MATCHES ".+")
# message("FOUND DEPENDS")
# Remember, four backslashes is escaped to one backslash in the string.
string(REGEX REPLACE "\\\\ " " " depend_text ${depend_text})
# This works for the nvcc -M generated dependency files.
string(REGEX REPLACE "^.* : " "" depend_text ${depend_text})
string(REGEX REPLACE "[ \\\\]*\n" ";" depend_text ${depend_text})
set(dependency_list "")
foreach(file ${depend_text})
string(REGEX REPLACE "^ +" "" file ${file})
if(NOT IS_DIRECTORY ${file})
# If softlinks start to matter, we should change this to REALPATH. For now we need
# to flatten paths, because nvcc can generate stuff like /bin/../include instead of
# just /include.
get_filename_component(file_absolute "${file}" ABSOLUTE)
list(APPEND dependency_list "${file_absolute}")
endif(NOT IS_DIRECTORY ${file})
endforeach(file)
else()
# message("FOUND NO DEPENDS")
endif()
# Remove the duplicate entries and sort them.
list(REMOVE_DUPLICATES dependency_list)
list(SORT dependency_list)
foreach(file ${dependency_list})
set(cuda_nvcc_depend "${cuda_nvcc_depend} \"${file}\"\n")
endforeach()
file(WRITE ${output_file} "# Generated by: make2cmake.cmake\nSET(CUDA_NVCC_DEPEND\n ${cuda_nvcc_depend})\n\n")

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branches/ParadisEO-GPU/ParadisEO-GPU/CMake/cuda/FindCUDA/parse_cubin.cmake
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# James Bigler, NVIDIA Corp (nvidia.com - jbigler)
# Abe Stephens, SCI Institute -- http://www.sci.utah.edu/~abe/FindCuda.html
#
# Copyright (c) 2008 - 2009 NVIDIA Corporation. All rights reserved.
#
# Copyright (c) 2007-2009
# Scientific Computing and Imaging Institute, University of Utah
#
# This code is licensed under the MIT License. See the FindCUDA.cmake script
# for the text of the license.
# The MIT License
#
# License for the specific language governing rights and limitations under
# Permission is hereby granted, free of charge, to any person obtaining a
# copy of this software and associated documentation files (the "Software"),
# to deal in the Software without restriction, including without limitation
# the rights to use, copy, modify, merge, publish, distribute, sublicense,
# and/or sell copies of the Software, and to permit persons to whom the
# Software is furnished to do so, subject to the following conditions:
#
# The above copyright notice and this permission notice shall be included
# in all copies or substantial portions of the Software.
#
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
# OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
# THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
# FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
# DEALINGS IN THE SOFTWARE.
#
#######################################################################
# Parses a .cubin file produced by nvcc and reports statistics about the file.
file(READ ${input_file} file_text)
if (${file_text} MATCHES ".+")
# Remember, four backslashes is escaped to one backslash in the string.
string(REGEX REPLACE ";" "\\\\;" file_text ${file_text})
string(REGEX REPLACE "\ncode" ";code" file_text ${file_text})
list(LENGTH file_text len)
foreach(line ${file_text})
# Only look at "code { }" blocks.
if(line MATCHES "^code")
# Break into individual lines.
string(REGEX REPLACE "\n" ";" line ${line})
foreach(entry ${line})
# Extract kernel names.
if (${entry} MATCHES "[^g]name = ([^ ]+)")
string(REGEX REPLACE ".* = ([^ ]+)" "\\1" entry ${entry})
# Check to see if the kernel name starts with "_"
set(skip FALSE)
# if (${entry} MATCHES "^_")
# Skip the rest of this block.
# message("Skipping ${entry}")
# set(skip TRUE)
# else (${entry} MATCHES "^_")
message("Kernel: ${entry}")
# endif (${entry} MATCHES "^_")
endif(${entry} MATCHES "[^g]name = ([^ ]+)")
# Skip the rest of the block if necessary
if(NOT skip)
# Registers
if (${entry} MATCHES "reg([ ]+)=([ ]+)([^ ]+)")
string(REGEX REPLACE ".*([ ]+)=([ ]+)([^ ]+)" "\\3" entry ${entry})
message("Registers: ${entry}")
endif()
# Local memory
if (${entry} MATCHES "lmem([ ]+)=([ ]+)([^ ]+)")
string(REGEX REPLACE ".*([ ]+)=([ ]+)([^ ]+)" "\\3" entry ${entry})
message("Local: ${entry}")
endif()
# Shared memory
if (${entry} MATCHES "smem([ ]+)=([ ]+)([^ ]+)")
string(REGEX REPLACE ".*([ ]+)=([ ]+)([^ ]+)" "\\3" entry ${entry})
message("Shared: ${entry}")
endif()
if (${entry} MATCHES "^}")
message("")
endif()
endif(NOT skip)
endforeach(entry)
endif(line MATCHES "^code")
endforeach(line)
else()
# message("FOUND NO DEPENDS")
endif()

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branches/ParadisEO-GPU/ParadisEO-GPU/CMake/cuda/FindCUDA/run_nvcc.cmake
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# James Bigler, NVIDIA Corp (nvidia.com - jbigler)
#
# Copyright (c) 2008 - 2009 NVIDIA Corporation. All rights reserved.
#
# This code is licensed under the MIT License. See the FindCUDA.cmake script
# for the text of the license.
# The MIT License
#
# License for the specific language governing rights and limitations under
# Permission is hereby granted, free of charge, to any person obtaining a
# copy of this software and associated documentation files (the "Software"),
# to deal in the Software without restriction, including without limitation
# the rights to use, copy, modify, merge, publish, distribute, sublicense,
# and/or sell copies of the Software, and to permit persons to whom the
# Software is furnished to do so, subject to the following conditions:
#
# The above copyright notice and this permission notice shall be included
# in all copies or substantial portions of the Software.
#
# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS
# OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
# FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
# THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
# LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
# FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
# DEALINGS IN THE SOFTWARE.
##########################################################################
# This file runs the nvcc commands to produce the desired output file along with
# the dependency file needed by CMake to compute dependencies. In addition the
# file checks the output of each command and if the command fails it deletes the
# output files.
# Input variables
#
# verbose:BOOL=<> OFF: Be as quiet as possible (default)
# ON : Describe each step
#
# build_configuration:STRING=<> Typically one of Debug, MinSizeRel, Release, or
# RelWithDebInfo, but it should match one of the
# entries in CUDA_HOST_FLAGS. This is the build
# configuration used when compiling the code. If
# blank or unspecified Debug is assumed as this is
# what CMake does.
#
# generated_file:STRING=<> File to generate. This argument must be passed in.
#
# generated_cubin_file:STRING=<> File to generate. This argument must be passed
# in if build_cubin is true.
if(NOT generated_file)
message(FATAL_ERROR "You must specify generated_file on the command line")
endif()
# Set these up as variables to make reading the generated file easier
set(CMAKE_COMMAND "@CMAKE_COMMAND@")
set(source_file "@source_file@")
set(NVCC_generated_dependency_file "@NVCC_generated_dependency_file@")
set(cmake_dependency_file "@cmake_dependency_file@")
set(CUDA_make2cmake "@CUDA_make2cmake@")
set(CUDA_parse_cubin "@CUDA_parse_cubin@")
set(build_cubin @build_cubin@)
# We won't actually use these variables for now, but we need to set this, in
# order to force this file to be run again if it changes.
set(generated_file_path "@generated_file_path@")
set(generated_file_internal "@generated_file@")
set(generated_cubin_file_internal "@generated_cubin_file@")
set(CUDA_NVCC_EXECUTABLE "@CUDA_NVCC_EXECUTABLE@")
set(CUDA_NVCC_FLAGS "@CUDA_NVCC_FLAGS@;;@CUDA_WRAP_OPTION_NVCC_FLAGS@")
@CUDA_NVCC_FLAGS_CONFIG@
set(nvcc_flags "@nvcc_flags@")
set(CUDA_NVCC_INCLUDE_ARGS "@CUDA_NVCC_INCLUDE_ARGS@")
set(format_flag "@format_flag@")
if(build_cubin AND NOT generated_cubin_file)
message(FATAL_ERROR "You must specify generated_cubin_file on the command line")
endif()
# This is the list of host compilation flags. It C or CXX should already have
# been chosen by FindCUDA.cmake.
@CUDA_HOST_FLAGS@
# Take the compiler flags and package them up to be sent to the compiler via -Xcompiler
set(nvcc_host_compiler_flags "")
# If we weren't given a build_configuration, use Debug.
if(NOT build_configuration)
set(build_configuration Debug)
endif()
string(TOUPPER "${build_configuration}" build_configuration)
#message("CUDA_NVCC_HOST_COMPILER_FLAGS = ${CUDA_NVCC_HOST_COMPILER_FLAGS}")
foreach(flag ${CMAKE_HOST_FLAGS} ${CMAKE_HOST_FLAGS_${build_configuration}})
# Extra quotes are added around each flag to help nvcc parse out flags with spaces.
set(nvcc_host_compiler_flags "${nvcc_host_compiler_flags},\"${flag}\"")
endforeach()
if (nvcc_host_compiler_flags)
set(nvcc_host_compiler_flags "-Xcompiler" ${nvcc_host_compiler_flags})
endif()
#message("nvcc_host_compiler_flags = \"${nvcc_host_compiler_flags}\"")
# Add the build specific configuration flags
list(APPEND CUDA_NVCC_FLAGS ${CUDA_NVCC_FLAGS_${build_configuration}})
if(DEFINED CCBIN)
set(CCBIN -ccbin "${CCBIN}")
endif()
# cuda_execute_process - Executes a command with optional command echo and status message.
#
# status - Status message to print if verbose is true
# command - COMMAND argument from the usual execute_process argument structure
# ARGN - Remaining arguments are the command with arguments
#
# CUDA_result - return value from running the command
#
# Make this a macro instead of a function, so that things like RESULT_VARIABLE
# and other return variables are present after executing the process.
macro(cuda_execute_process status command)
set(_command ${command})
if(NOT _command STREQUAL "COMMAND")
message(FATAL_ERROR "Malformed call to cuda_execute_process. Missing COMMAND as second argument. (command = ${command})")
endif()
if(verbose)
execute_process(COMMAND "${CMAKE_COMMAND}" -E echo -- ${status})
# Now we need to build up our command string. We are accounting for quotes
# and spaces, anything else is left up to the user to fix if they want to
# copy and paste a runnable command line.
set(cuda_execute_process_string)
foreach(arg ${ARGN})
# If there are quotes, excape them, so they come through.
string(REPLACE "\"" "\\\"" arg ${arg})
# Args with spaces need quotes around them to get them to be parsed as a single argument.
if(arg MATCHES " ")
list(APPEND cuda_execute_process_string "\"${arg}\"")
else()
list(APPEND cuda_execute_process_string ${arg})
endif()
endforeach()
# Echo the command
execute_process(COMMAND ${CMAKE_COMMAND} -E echo ${cuda_execute_process_string})
endif(verbose)
# Run the command
execute_process(COMMAND ${ARGN} RESULT_VARIABLE CUDA_result )
endmacro()
# Delete the target file
cuda_execute_process(
"Removing ${generated_file}"
COMMAND "${CMAKE_COMMAND}" -E remove "${generated_file}"
)
# For CUDA 2.3 and below, -G -M doesn't work, so remove the -G flag
# for dependency generation and hope for the best.
set(depends_CUDA_NVCC_FLAGS "${CUDA_NVCC_FLAGS}")
set(CUDA_VERSION @CUDA_VERSION@)
if(CUDA_VERSION VERSION_LESS "3.0")
cmake_policy(PUSH)
# CMake policy 0007 NEW states that empty list elements are not
# ignored. I'm just setting it to avoid the warning that's printed.
cmake_policy(SET CMP0007 NEW)
# Note that this will remove all occurances of -G.
list(REMOVE_ITEM depends_CUDA_NVCC_FLAGS "-G")
cmake_policy(POP)
endif()
# nvcc doesn't define __CUDACC__ for some reason when generating dependency files. This
# can cause incorrect dependencies when #including files based on this macro which is
# defined in the generating passes of nvcc invokation. We will go ahead and manually
# define this for now until a future version fixes this bug.
set(CUDACC_DEFINE -D__CUDACC__)
# Generate the dependency file
cuda_execute_process(
"Generating dependency file: ${NVCC_generated_dependency_file}"
COMMAND "${CUDA_NVCC_EXECUTABLE}"
-M
${CUDACC_DEFINE}
"${source_file}"
-o "${NVCC_generated_dependency_file}"
${CCBIN}
${nvcc_flags}
${nvcc_host_compiler_flags}
${depends_CUDA_NVCC_FLAGS}
-DNVCC
${CUDA_NVCC_INCLUDE_ARGS}
)
if(CUDA_result)
message(FATAL_ERROR "Error generating ${generated_file}")
endif()
# Generate the cmake readable dependency file to a temp file. Don't put the
# quotes just around the filenames for the input_file and output_file variables.
# CMake will pass the quotes through and not be able to find the file.
cuda_execute_process(
"Generating temporary cmake readable file: ${cmake_dependency_file}.tmp"
COMMAND "${CMAKE_COMMAND}"
-D "input_file:FILEPATH=${NVCC_generated_dependency_file}"
-D "output_file:FILEPATH=${cmake_dependency_file}.tmp"
-P "${CUDA_make2cmake}"
)
if(CUDA_result)
message(FATAL_ERROR "Error generating ${generated_file}")
endif()
# Copy the file if it is different
cuda_execute_process(
"Copy if different ${cmake_dependency_file}.tmp to ${cmake_dependency_file}"
COMMAND "${CMAKE_COMMAND}" -E copy_if_different "${cmake_dependency_file}.tmp" "${cmake_dependency_file}"
)
if(CUDA_result)
message(FATAL_ERROR "Error generating ${generated_file}")
endif()
# Delete the temporary file
cuda_execute_process(
"Removing ${cmake_dependency_file}.tmp and ${NVCC_generated_dependency_file}"
COMMAND "${CMAKE_COMMAND}" -E remove "${cmake_dependency_file}.tmp" "${NVCC_generated_dependency_file}"
)
if(CUDA_result)
message(FATAL_ERROR "Error generating ${generated_file}")
endif()
# Generate the code
cuda_execute_process(
"Generating ${generated_file}"
COMMAND "${CUDA_NVCC_EXECUTABLE}"
"${source_file}"
${format_flag} -o "${generated_file}"
${CCBIN}
${nvcc_flags}
${nvcc_host_compiler_flags}
${CUDA_NVCC_FLAGS}
-DNVCC
${CUDA_NVCC_INCLUDE_ARGS}
)
if(CUDA_result)
# Since nvcc can sometimes leave half done files make sure that we delete the output file.
cuda_execute_process(
"Removing ${generated_file}"
COMMAND "${CMAKE_COMMAND}" -E remove "${generated_file}"
)
message(FATAL_ERROR "Error generating file ${generated_file}")
else()
if(verbose)
message("Generated ${generated_file} successfully.")
endif()
endif()
# Cubin resource report commands.
if( build_cubin )
# Run with -cubin to produce resource usage report.
cuda_execute_process(
"Generating ${generated_cubin_file}"
COMMAND "${CUDA_NVCC_EXECUTABLE}"
"${source_file}"
${CUDA_NVCC_FLAGS}
${nvcc_flags}
${CCBIN}
${nvcc_host_compiler_flags}
-DNVCC
-cubin
-o "${generated_cubin_file}"
${CUDA_NVCC_INCLUDE_ARGS}
)
# Execute the parser script.
cuda_execute_process(
"Executing the parser script"
COMMAND "${CMAKE_COMMAND}"
-D "input_file:STRING=${generated_cubin_file}"
-P "${CUDA_parse_cubin}"
)
endif( build_cubin )

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branches/ParadisEO-GPU/ParadisEO-GPU/CMakeLists.txt
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######################################################################################
### 0) Set your application properties
######################################################################################
# check cmake version compatibility
CMAKE_MINIMUM_REQUIRED(VERSION 2.6)
# Here define your project name
PROJECT(Paradiseo-GPU)
SET(PACKAGE_BUGREPORT "paradiseo-help@lists.gforge.inria.fr" CACHE STRING "Package bug report" FORCE)
SET(PACKAGE_NAME "ParadisEO-GPU - Moving Objects GPU" CACHE STRING "Package name" FORCE)
SET(PACKAGE_STRING "ParadisEO-GPU 1.0" CACHE STRING "GPU Package string full name" FORCE)
SET(PACKAGE_VERSION "1.0" CACHE STRING "Package version" FORCE)
SET(GLOBAL_VERSION "1.0" CACHE STRING "Global version" FORCE)
SET(VERSION "1.0.0" CACHE STRING "Version" FORCE)
# regular expression checking
INCLUDE_REGULAR_EXPRESSION("^.*$" "^$")
# set a language for the entire project.
ENABLE_LANGUAGE(CXX)
ENABLE_LANGUAGE(C)
######################################################################################
##########################################
# Find Cuda package #
##########################################
set(CMAKE_MODULE_PATH "${CMAKE_SOURCE_DIR}/CMake/cuda" ${CMAKE_MODULE_PATH})
find_package(CUDA QUIET REQUIRED)
# Check if CUDA was found
if (CUDA_FOUND)
message("CUDA found")
else()
message("CUDA not found")
endif()
######################################################################################
### 1) Include the install configuration file where are defined the main variables
######################################################################################
INCLUDE(${CMAKE_SOURCE_DIR}/install.cmake)
######################################################################################
######################################################################################
### 2) Include the sources
######################################################################################
##########################################
# Include required modules & utilities #
##########################################
INCLUDE(CMakeBackwardCompatibilityCXX)
INCLUDE(FindDoxygen)
INCLUDE(CheckLibraryExists)
INCLUDE(Dart OPTIONAL)
# Set a special flag if the environment is windows (should do the same in a config.g file)
IF (WIN32)
ADD_DEFINITIONS(-D_WINDOWS=1)
ENDIF (WIN32)
######################################################################################
#########################
# Manage the build type #
#########################
# the user should choose the build type on windows environments,excepted under cygwin (default=none)
SET(CMAKE_DEFAULT_BUILD_TYPE "Release" CACHE STRING "Variable that stores the default CMake build type" FORCE)
FIND_PROGRAM(MEMORYCHECK_COMMAND
NAMES purify valgrind
PATHS
"/usr/local/bin /usr/bin [HKEY_LOCAL_MACHINE\\SOFTWARE\\Rational Software\\Purify\\Setup;InstallFolder]"
DOC "Path to the memory checking command, used for memory error detection.")
IF(NOT CMAKE_BUILD_TYPE)
SET( CMAKE_BUILD_TYPE
${CMAKE_DEFAULT_BUILD_TYPE} CACHE STRING
"Choose the type of build, options are: Debug Release RelWithDebInfo MinSizeRel."
FORCE)
ENDIF(NOT CMAKE_BUILD_TYPE)
IF(WIN32 AND NOT CYGWIN)
IF(CMAKE_CXX_COMPILER MATCHES cl)
IF(NOT WITH_SHARED_LIBS)
IF(CMAKE_GENERATOR STREQUAL "Visual Studio 8 2005" OR CMAKE_GENERATOR STREQUAL "Visual Studio 9 2008")
SET(CMAKE_CXX_FLAGS "/nologo /Gy")
SET(CMAKE_CXX_FLAGS_DEBUG "/W3 /MTd /Z7 /Od")
SET(CMAKE_CXX_FLAGS_RELEASE "/w /MT /O2 /wd4530")
SET(CMAKE_CXX_FLAGS_MINSIZEREL "/MT /O2")
SET(CMAKE_CXX_FLAGS_RELWITHDEBINFO "/MTd /Z7 /Od")
SET(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} /SUBSYSTEM:CONSOLE")
ENDIF(CMAKE_GENERATOR STREQUAL "Visual Studio 8 2005" OR CMAKE_GENERATOR STREQUAL "Visual Studio 9 2008")
ENDIF(NOT WITH_SHARED_LIBS)
ENDIF(CMAKE_CXX_COMPILER MATCHES cl)
ELSE(WIN32 AND NOT CYGWIN)
IF(CMAKE_COMPILER_IS_GNUCXX)
SET(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -O2 -g -pg -fprofile-arcs -ftest-coverage -Wall -Wextra -Wno-unused-parameter")
SET(CMAKE_CXX_FLAGS_RELEASE "${CMAKE_CXX_FLAGS_RELEASE} -O2")
SET(CMAKE_CXX_FLAGS_MINSIZEREL "${CMAKE_CXX_FLAGS_MINSIZEREL} -O6")
ENDIF(CMAKE_COMPILER_IS_GNUCXX)
ENDIF(WIN32 AND NOT CYGWIN)
IF(CMAKE_BUILD_TYPE MATCHES Debug)
ADD_DEFINITIONS(-DCMAKE_VERBOSE_MAKEFILE=ON)
ENDIF(CMAKE_BUILD_TYPE MATCHES Debug)
EXECUTE_PROCESS(
COMMAND ${CMAKE_COMMAND} -E copy_if_different
${PARADISEO_GPU_SRC_DIR}/CTestCustom.cmake
${PARADISEO_GPU_BIN_DIR}/CTestCustom.cmake)
##########################################################################################################################################
######################################################################################
### 3) Link the librairies for your executable
######################################################################################
ADD_SUBDIRECTORY(doc)
ADD_SUBDIRECTORY(src)
ADD_SUBDIRECTORY(test)
ADD_SUBDIRECTORY(tutoriel)
######################################################################################

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branches/ParadisEO-GPU/ParadisEO-GPU/CTestConfig.cmake
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set(CTEST_PROJECT_NAME "ParadisEO")
set(CTEST_NIGHTLY_START_TIME "00:00:00 EST")
set(CTEST_DROP_METHOD "http")
set(CTEST_DROP_SITE "cdash.inria.fr")
set(CTEST_DROP_LOCATION "/CDash/submit.php?project=ParadisEO")
set(CTEST_DROP_SITE_CDASH TRUE)

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branches/ParadisEO-GPU/ParadisEO-GPU/CTestCustom.cmake
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SET(CTEST_CUSTOM_COVERAGE_EXCLUDE
${CTEST_CUSTOM_COVERAGE_EXCLUDE}
"test/"
"paradiseo-eo/"
"paradiseo-mo/"
"paradiseo-moeo/"
"problems/"
"tutorial/"
)

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branches/ParadisEO-GPU/ParadisEO-GPU/README.txt
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This package contains the source for ParadisEO-GPU problems.
# Step 1 - Configuration
------------------------
Edit the "install.cmake" file by entering the FULL PATH of :
-"ParadisEO_PATH" where Paradiseo directory has been installed in your host.
-"ParadisEO-GPU_PATH" where ParadisEO-GPU package has been decompressed in your host.
-"CUDA_PATH" where CUDA has been installed in your host.
-"NVIDIA_PATH" where NVIDIA has been installed in your host.
# Step 2 - Build process
------------------------
ParadisEO is assumed to be compiled. To download ParadisEO, please visit http://paradiseo.gforge.inria.fr/.
Go to the ParadisEO-GPU/build/ directory and lunch cmake:
(Unix) > cmake .. -DENABLE_CMAKE_TESTING=TRUE -DCMAKE_BUILD_TYPE=Debug
# Step 3 - Compilation
----------------------
In the ParadisEO-GPU/build/ directory:
(Unix) > make
# Step 4 - Execution
---------------------
A toy example is given to test the components. You can run these tests as following.
To define problem-related components for your own problem, please refer to the tutorials available on the website : http://paradiseo.gforge.inria.fr/.
In the ParadisEO-GPU/build/ directory:
(Unix) > ctest -D ExperimentalStart -D ExperimentalBuild -D ExperimentalTest -D ExperimentalSubmit
In the directory "tutorial", there is an example of One Max problem which illustrate how to use this package.
# Documentation
---------------
The API-documentation is available in doc/html/index.html

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# Doxyfile 1.5.1
#---------------------------------------------------------------------------
# Project related configuration options
#---------------------------------------------------------------------------
PROJECT_NAME = @PACKAGE_NAME@
PROJECT_NUMBER = @PACKAGE_VERSION@
OUTPUT_DIRECTORY = @CMAKE_BINARY_DIR@/doc
CREATE_SUBDIRS = NO
OUTPUT_LANGUAGE = English
BRIEF_MEMBER_DESC = YES
REPEAT_BRIEF = YES
ABBREVIATE_BRIEF = "The $name class" \
"The $name widget" \
"The $name file" \
is \
provides \
specifies \
contains \
represents \
a \
an \
the
ALWAYS_DETAILED_SEC = NO
INLINE_INHERITED_MEMB = NO
FULL_PATH_NAMES = NO
STRIP_FROM_PATH = @CMAKE_SOURCE_DIR@
STRIP_FROM_INC_PATH =
SHORT_NAMES = NO
JAVADOC_AUTOBRIEF = YES
MULTILINE_CPP_IS_BRIEF = NO
DETAILS_AT_TOP = NO
INHERIT_DOCS = YES
SEPARATE_MEMBER_PAGES = NO
TAB_SIZE = 8
ALIASES =
OPTIMIZE_OUTPUT_FOR_C = NO
OPTIMIZE_OUTPUT_JAVA = NO
BUILTIN_STL_SUPPORT = NO
DISTRIBUTE_GROUP_DOC = NO
SUBGROUPING = YES
#---------------------------------------------------------------------------
# Build related configuration options
#---------------------------------------------------------------------------
EXTRACT_ALL = YES
EXTRACT_PRIVATE = YES
EXTRACT_STATIC = YES
EXTRACT_LOCAL_CLASSES = YES
EXTRACT_LOCAL_METHODS = YES
HIDE_UNDOC_MEMBERS = YES
HIDE_UNDOC_CLASSES = YES
HIDE_FRIEND_COMPOUNDS = NO
HIDE_IN_BODY_DOCS = NO
INTERNAL_DOCS = NO
CASE_SENSE_NAMES = YES
HIDE_SCOPE_NAMES = NO
SHOW_INCLUDE_FILES = YES
INLINE_INFO = YES
SORT_MEMBER_DOCS = NO
SORT_BRIEF_DOCS = NO
SORT_BY_SCOPE_NAME = NO
GENERATE_TODOLIST = YES
GENERATE_TESTLIST = YES
GENERATE_BUGLIST = YES
GENERATE_DEPRECATEDLIST= YES
ENABLED_SECTIONS =
MAX_INITIALIZER_LINES = 30
SHOW_USED_FILES = YES
SHOW_DIRECTORIES = NO
FILE_VERSION_FILTER =
#---------------------------------------------------------------------------
# configuration options related to warning and progress messages
#---------------------------------------------------------------------------
QUIET = YES
WARNINGS = NO
WARN_IF_UNDOCUMENTED = NO
WARN_IF_DOC_ERROR = YES
WARN_NO_PARAMDOC = NO
WARN_FORMAT = "$file:$line: $text"
WARN_LOGFILE =
#---------------------------------------------------------------------------
# configuration options related to the input files
#---------------------------------------------------------------------------
INPUT = @CMAKE_SOURCE_DIR@
FILE_PATTERNS = *.cu \
*.cpp \
*.h \
NEWS README
RECURSIVE = YES
EXCLUDE =
EXCLUDE_SYMLINKS = NO
EXCLUDE_PATTERNS =
EXAMPLE_PATH =
EXAMPLE_PATTERNS = *
EXAMPLE_RECURSIVE = NO
IMAGE_PATH =
INPUT_FILTER =
FILTER_PATTERNS =
FILTER_SOURCE_FILES = NO
#---------------------------------------------------------------------------
# configuration options related to source browsing
#---------------------------------------------------------------------------
SOURCE_BROWSER = YES
INLINE_SOURCES = NO
STRIP_CODE_COMMENTS = YES
REFERENCED_BY_RELATION = YES
REFERENCES_RELATION = YES
REFERENCES_LINK_SOURCE = YES
USE_HTAGS = NO
VERBATIM_HEADERS = YES
#---------------------------------------------------------------------------
# configuration options related to the alphabetical class index
#---------------------------------------------------------------------------
ALPHABETICAL_INDEX = YES
COLS_IN_ALPHA_INDEX = 3
IGNORE_PREFIX =
#moeo
#---------------------------------------------------------------------------
# configuration options related to the HTML output
#---------------------------------------------------------------------------
GENERATE_HTML = YES
HTML_OUTPUT = html
HTML_FILE_EXTENSION = .html
HTML_HEADER =
HTML_FOOTER =
HTML_STYLESHEET =
HTML_ALIGN_MEMBERS = YES
GENERATE_HTMLHELP = NO
CHM_FILE =
HHC_LOCATION =
GENERATE_CHI = NO
BINARY_TOC = NO
TOC_EXPAND = NO
DISABLE_INDEX = NO
ENUM_VALUES_PER_LINE = 4
GENERATE_TREEVIEW = YES
TREEVIEW_WIDTH = 250
#---------------------------------------------------------------------------
# configuration options related to the LaTeX output
#---------------------------------------------------------------------------
GENERATE_LATEX = YES
LATEX_OUTPUT = latex
LATEX_CMD_NAME = latex
MAKEINDEX_CMD_NAME = makeindex
COMPACT_LATEX = NO
PAPER_TYPE = a4wide
EXTRA_PACKAGES =
LATEX_HEADER =
PDF_HYPERLINKS = NO
USE_PDFLATEX = NO
LATEX_BATCHMODE = NO
LATEX_HIDE_INDICES = NO
#---------------------------------------------------------------------------
# configuration options related to the RTF output
#---------------------------------------------------------------------------
GENERATE_RTF = NO
RTF_OUTPUT = rtf
COMPACT_RTF = NO
RTF_HYPERLINKS = NO
RTF_STYLESHEET_FILE =
RTF_EXTENSIONS_FILE =
#---------------------------------------------------------------------------
# configuration options related to the man page output
#---------------------------------------------------------------------------
GENERATE_MAN = YES
MAN_OUTPUT = man
MAN_EXTENSION = .3
MAN_LINKS = NO
#---------------------------------------------------------------------------
# configuration options related to the XML output
#---------------------------------------------------------------------------
GENERATE_XML = NO
XML_OUTPUT = xml
XML_SCHEMA =
XML_DTD =
XML_PROGRAMLISTING = YES
#---------------------------------------------------------------------------
# configuration options for the AutoGen Definitions output
#---------------------------------------------------------------------------
GENERATE_AUTOGEN_DEF = NO
#---------------------------------------------------------------------------
# configuration options related to the Perl module output
#---------------------------------------------------------------------------
GENERATE_PERLMOD = NO
PERLMOD_LATEX = NO
PERLMOD_PRETTY = YES
PERLMOD_MAKEVAR_PREFIX =
#---------------------------------------------------------------------------
# Configuration options related to the preprocessor
#---------------------------------------------------------------------------
ENABLE_PREPROCESSING = YES
MACRO_EXPANSION = NO
EXPAND_ONLY_PREDEF = NO
SEARCH_INCLUDES = YES
INCLUDE_PATH =
INCLUDE_FILE_PATTERNS =
PREDEFINED =
EXPAND_AS_DEFINED =
SKIP_FUNCTION_MACROS = YES
#---------------------------------------------------------------------------
# Configuration::additions related to external references
#---------------------------------------------------------------------------
TAGFILES = @PARADISEO_EO_BIN_DIR@/doc/eo.doxytag=http://eodev.sourceforge.net/eo/doc/html \
@PARADISEO_MO_BIN_DIR@/doc/mo.doxytag=http://paradiseo.gforge.inria.fr/addon/paradiseo-mo/doc \
GENERATE_TAGFILE = @CMAKE_BINARY_DIR@/doc/mogpu.doxytag
ALLEXTERNALS = NO
EXTERNAL_GROUPS = YES
PERL_PATH = /usr/bin/perl
#---------------------------------------------------------------------------
# Configuration options related to the dot tool
#---------------------------------------------------------------------------
CLASS_DIAGRAMS = YES
HIDE_UNDOC_RELATIONS = YES
HAVE_DOT = YES
CLASS_GRAPH = YES
COLLABORATION_GRAPH = YES
GROUP_GRAPHS = YES
UML_LOOK = YES
TEMPLATE_RELATIONS = YES
INCLUDE_GRAPH = YES
INCLUDED_BY_GRAPH = YES
CALL_GRAPH = YES
CALLER_GRAPH = YES
GRAPHICAL_HIERARCHY = YES
DIRECTORY_GRAPH = YES
DOT_IMAGE_FORMAT = png
DOT_PATH =
DOTFILE_DIRS =
DOT_GRAPH_MAX_NODES = 50
MAX_DOT_GRAPH_DEPTH = 50
DOT_TRANSPARENT = YES
DOT_MULTI_TARGETS = YES
GENERATE_LEGEND = YES
DOT_CLEANUP = YES
#---------------------------------------------------------------------------
# Configuration::additions related to the search engine
#---------------------------------------------------------------------------
SEARCHENGINE = YES

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/** @mainpage Welcome ParadisEO GPU
@section intro Introduction
ParadisEO-GPU is a white-box object-oriented generic framework dedicated to the flexible design of local search algorithms on GPU (hill-climbing, tabu search ...)
@section tutorials Tutorials
Tutorials for ParadisEO-GPU are available in the "Tutorials section" of the <a href="http://paradiseo.gforge.inria.fr/index.php?n=Doc.Tutorials">ParadisEO tutorials</a>.
@section install Installation
The installation procedure of the package is detailed in the "README.txt" file located in the top-directory of the source-tree.
@section design Design
For an introduction to the design of ParadisEO,
you can look at the <a href="http://paradiseo.gforge.inria.fr">ParadisEO website</a>.
@section LICENSE
This software is governed by the CeCILL license under French law and
abiding by the rules of distribution of free software. You can use,
modify and/ or redistribute the software under the terms of the CeCILL
license as circulated by CEA, CNRS and INRIA at the following URL
"http://www.cecill.info".
As a counterpart to the access to the source code and rights to copy,
modify and redistribute granted by the license, users are provided only
with a limited warranty and the software's author, the holder of the
economic rights, and the successive licensors have only limited liability.
In this respect, the user's attention is drawn to the risks associated
with loading, using, modifying and/or developing or reproducing the
software by the user in light of its specific status of free software,
that may mean that it is complicated to manipulate, and that also
therefore means that it is reserved for developers and experienced
professionals having in-depth computer knowledge. Users are therefore
encouraged to load and test the software's suitability as regards their
requirements in conditions enabling the security of their systems and/or
data to be ensured and, more generally, to use and operate it in the
same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
*/
/** @page webpages Related webpages
- ParadisEO <a href="http://paradiseo.gforge.inria.fr">homepage</a>
- INRIA GForge <a href="http://gforge.inria.fr/projects/paradiseo/">project page</a>
- Fore any questions, please contact paradiseo-help@lists.gforge.inria.fr
*/

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#########################################################################################################
# 1) ParadisEO-GPU install: SIMPLE Configuration
#########################################################################################################
# Here, just specify PARADISEO_DIR : the directory where ParadisEO has been installed
SET(PARADISEO_DIR "/home/mia/workspace/trunk" CACHE PATH "ParadisEO directory" FORCE)
# Here, just specify CUDA_DIR : the directory where CUDA has been installed
SET(CUDA_DIR "/usr/local/cuda" CACHE PATH "CUDA directory" FORCE)
# Here, just specify NVIDIA_DIR : the directory where NVIDIA header has been installed
SET(NVIDIA_DIR "/home/mia/NVIDIA_GPU_Computing_SDK" CACHE PATH "NVIDIA directory" FORCE)
# Here, just specify GPU_DIR : the directory where package Paradiseo GPU has been extrated
SET(PARADISEO_GPU_DIR "/home/mia/workspace/ParadisEO-GPU" CACHE PATH "ParadisEO-GPU directory" FORCE)
#########################################################################################################
# 2) ParadisEO-GPU install: ADVANCED Configuration
#########################################################################################################
SET(NVIDIA_SRC_DIR "${NVIDIA_DIR}/C/common/inc" CACHE PATH "NVIDIA source directory" FORCE)
SET(NVIDIA_LIB_DIR "${NVIDIA_DIR}/C/lib" CACHE PATH "NVIDIA library directory" FORCE)
SET(CUDA_SRC_DIR "${CUDA_DIR}/include" CACHE PATH "CUDA source directory" FORCE)
SET(CUDA_LIB_DIR "${CUDA_DIR}/lib" CACHE PATH "CUDA library directory" FORCE)
SET(PARADISEO_EO_SRC_DIR "${PARADISEO_DIR}/paradiseo-eo" CACHE PATH "ParadisEO-EO source directory" FORCE)
SET(PARADISEO_EO_BIN_DIR "${PARADISEO_DIR}/paradiseo-eo/build" CACHE PATH "ParadisEO-EO binary directory" FORCE)
SET(PARADISEO_MO_SRC_DIR "${PARADISEO_DIR}/paradiseo-mo" CACHE PATH "ParadisEO-MO source directory" FORCE)
SET(PARADISEO_MO_BIN_DIR "${PARADISEO_DIR}/paradiseo-mo/build" CACHE PATH "ParadisEO-MO binary directory" FORCE)
SET(PARADISEO_MOEO_SRC_DIR "${PARADISEO_DIR}/paradiseo-moeo" CACHE PATH "ParadisEO-MOEO source directory" FORCE)
SET(PARADISEO_MOEO_BIN_DIR "${PARADISEO_DIR}/paradiseo-moeo/build" CACHE PATH "ParadisEO-MOEO binary directory" FORCE)
SET(PARADISEO_PEO_SRC_DIR "${PARADISEO_DIR}/paradiseo-peo" CACHE PATH "ParadisEO-PEO source directory" FORCE)
SET(PARADISEO_PEO_BIN_DIR "${PARADISEO_DIR}/paradiseo-peo/build" CACHE PATH "ParadisEO-PEO binary directory" FORCE)
SET(PARADISEO_GPU_SRC_DIR "${PARADISEO_GPU_DIR}/src" CACHE PATH "ParadisEO-GPU source directory" FORCE)
SET(PARADISEO_GPU_BIN_DIR "${PARADISEO_GPU_DIR}/build" CACHE PATH "ParadisEO-GPU binary directory" FORCE)
SET(PARADISEO_PROBLEMS_SRC_DIR "${PARADISEO_DIR}/problems" CACHE PATH "ParadisEO-problems source directory" FORCE)
#########################################################################################################

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/*
<moCudaBitVector.h>
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
Karima Boufaras, Thé Van LUONG
This software is governed by the CeCILL license under French law and
abiding by the rules of distribution of free software. You can use,
modify and/ or redistribute the software under the terms of the CeCILL
license as circulated by CEA, CNRS and INRIA at the following URL
"http://www.cecill.info".
As a counterpart to the access to the source code and rights to copy,
modify and redistribute granted by the license, users are provided only
with a limited warranty and the software's author, the holder of the
economic rights, and the successive licensors have only limited liability.
In this respect, the user's attention is drawn to the risks associated
with loading, using, modifying and/or developing or reproducing the
software by the user in light of its specific status of free software,
that may mean that it is complicated to manipulate, and that also
therefore means that it is reserved for developers and experienced
professionals having in-depth computer knowledge. Users are therefore
encouraged to load and test the software's suitability as regards their
requirements in conditions enabling the security of their systems and/or
data to be ensured and, more generally, to use and operate it in the
same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
*/
#ifndef _moCudaBitVector_H_
#define _moCudaBitVector_H_
#include <cudaType/moCudaVector.h>
/**
* Implementation of Bit vector representation on CUDA.
*/
template<class Fitness>
class moCudaBitVector: public moCudaVector<bool, Fitness> {
public:
using moCudaVector<bool, Fitness>::vect;
using moCudaVector<bool, Fitness>::N;
/**
* Default constructor.
*/
moCudaBitVector() :
moCudaVector<bool, Fitness> () {
}
/**
*Constructor.
*@param _size The neighborhood size.
*/
moCudaBitVector(unsigned _size) {
N = _size;
vect = new bool[_size];
create();
}
/**
*Constructor.
*@param _size The neighborhood size.
*@param _b Value to assign to vector.
*/
moCudaBitVector(unsigned _size, bool _b) {
N = _size;
vect = new bool[_size];
for (unsigned i = 0; i < _size; i++)
vect[i] = _b;
}
/**
*Initializer of random bit vector.
*/
void create() {
for (unsigned i = 0; i < N; i++) {
vect[i] = (bool) round((float) rng.rand() / RAND_MAX);
}
}
};
#endif

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/*
<moCudaIntVector.h>
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
Karima Boufaras, Thé Van LUONG
This software is governed by the CeCILL license under French law and
abiding by the rules of distribution of free software. You can use,
modify and/ or redistribute the software under the terms of the CeCILL
license as circulated by CEA, CNRS and INRIA at the following URL
"http://www.cecill.info".
As a counterpart to the access to the source code and rights to copy,
modify and redistribute granted by the license, users are provided only
with a limited warranty and the software's author, the holder of the
economic rights, and the successive licensors have only limited liability.
In this respect, the user's attention is drawn to the risks associated
with loading, using, modifying and/or developing or reproducing the
software by the user in light of its specific status of free software,
that may mean that it is complicated to manipulate, and that also
therefore means that it is reserved for developers and experienced
professionals having in-depth computer knowledge. Users are therefore
encouraged to load and test the software's suitability as regards their
requirements in conditions enabling the security of their systems and/or
data to be ensured and, more generally, to use and operate it in the
same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
*/
#ifndef _moCudaIntVector_H_
#define _moCudaIntVector_H_
#include <cudaType/moCudaVector.h>
/**
* Implementation of integer vector representation on CUDA.
*/
template<class Fitness>
class moCudaIntVector: public moCudaVector<int, Fitness> {
public:
using moCudaVector<int, Fitness>::vect;
using moCudaVector<int, Fitness>::N;
/**
* Default constructor.
*/
moCudaIntVector() :
moCudaVector<int, Fitness> () {
}
/**
*Constructor.
*@param _size The neighborhood size.
*/
moCudaIntVector(unsigned _size) {
N = _size;
vect = new int[_size];
create();
}
/**
*Assignment operator
*@param _vector The vector passed to the function determine the new content.
*@return a new vector.
*/
moCudaIntVector& operator=(const moCudaIntVector & _vector) {
N = _vector.N;
vect = new int[N];
for (unsigned i = 0; i < N; i++)
vect[i] = _vector.vect[i];
fitness(_vector.fitness());
return (*this);
}
/**
*Initializer of random integer vector.
*/
void create() {
unsigned random;
int temp;
for (unsigned i = 0; i < N; i++)
vect[i] = i;
// we want a random permutation so we shuffle
for (unsigned i = 0; i < N; i++) {
random = rng.rand() % (N - i) + i;
temp = vect[i];
vect[i] = vect[random];
vect[random] = temp;
}
}
};
#endif

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/*
<moCudaVector.h>
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
Thé Van LUONG, Karima Boufaras
This software is governed by the CeCILL license under French law and
abiding by the rules of distribution of free software. You can use,
modify and/ or redistribute the software under the terms of the CeCILL
license as circulated by CEA, CNRS and INRIA at the following URL
"http://www.cecill.info".
As a counterpart to the access to the source code and rights to copy,
modify and redistribute granted by the license, users are provided only
with a limited warranty and the software's author, the holder of the
economic rights, and the successive licensors have only limited liability.
In this respect, the user's attention is drawn to the risks associated
with loading, using, modifying and/or developing or reproducing the
software by the user in light of its specific status of free software,
that may mean that it is complicated to manipulate, and that also
therefore means that it is reserved for developers and experienced
professionals having in-depth computer knowledge. Users are therefore
encouraged to load and test the software's suitability as regards their
requirements in conditions enabling the security of their systems and/or
data to be ensured and, more generally, to use and operate it in the
same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
*/
#ifndef _moCudaVector_H_
#define _moCudaVector_H_
#include <eo>
/**
* Implementation of vector representation on CUDA.
*/
template<class ElemT, class Fitness>
class moCudaVector: public EO<Fitness> {
public:
typedef ElemT ElemType;
ElemType * vect;
unsigned N;
/**
* Default constructor.
*/
moCudaVector() :
N(0) {
}
/**
*Constructor.
*@param _size The neighborhood size.
*/
moCudaVector(unsigned _size) {
N = _size;
vect = new ElemType[_size];
create();
}
/**
* Destructor.
*/
~moCudaVector() {
if (N > 1)
delete[] vect;
}
/**
*How to fill the vector.
*/
virtual void create() {
}
/**
*Assignment operator
*@param _vector The vector passed to the function determine the new content.
*@return a new vector.
*/
virtual moCudaVector& operator=(const moCudaVector & _vector) {
N = _vector.N;
vect = new ElemType[N];
for (unsigned i = 0; i < N; i++)
vect[i] = _vector.vect[i];
fitness(_vector.fitness());
return (*this);
}
/**
*An accessor read only on the i'th element of the vector (function inline can be called from host or device).
*@param
*_i The i'th element of vector.
*@return
*The i'th element of the vector for read only
*/
inline __host__ __device__ const ElemType & operator[](unsigned _i) const {
return vect[_i];
}
/**
*An accessor read-write on the i'th element of the vector(function inline can be called from host or device).
*@param _i The i'th element of the vector.
*@return The i'th element of the vector for read-write
*/
inline __host__ __device__ ElemType & operator[](unsigned _i) {
return vect[_i];
}
/**
*Function inline to get the size of vector, called from host and device.
*@return The vector size's
*/
inline __host__ __device__ unsigned size() {
return N;
}
virtual void printOn(std::ostream& os) const {
EO<Fitness>::printOn(os);
os << ' ';
os << N << ' ';
unsigned int i;
for (i = 0; i < N; i++)
os << vect[i] << ' ';
}
};
#endif

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/*
<moCudaEval.h>
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
Karima Boufaras, Thé Van LUONG
This software is governed by the CeCILL license under French law and
abiding by the rules of distribution of free software. You can use,
modify and/ or redistribute the software under the terms of the CeCILL
license as circulated by CEA, CNRS and INRIA at the following URL
"http://www.cecill.info".
As a counterpart to the access to the source code and rights to copy,
modify and redistribute granted by the license, users are provided only
with a limited warranty and the software's author, the holder of the
economic rights, and the successive licensors have only limited liability.
In this respect, the user's attention is drawn to the risks associated
with loading, using, modifying and/or developing or reproducing the
software by the user in light of its specific status of free software,
that may mean that it is complicated to manipulate, and that also
therefore means that it is reserved for developers and experienced
professionals having in-depth computer knowledge. Users are therefore
encouraged to load and test the software's suitability as regards their
requirements in conditions enabling the security of their systems and/or
data to be ensured and, more generally, to use and operate it in the
same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
*/
#ifndef moCudaEval_H
#define moCudaEval_H
#include <eval/moEval.h>
/**
* Abstract class for evaluation on GPU
*/
template<class Neighbor>
class moCudaEval: public moEval<Neighbor> {
public:
/**
* Define type of a solution corresponding to Neighbor
*/
typedef typename Neighbor::EOT EOT;
typedef typename EOT::Fitness Fitness;
/**
* Constructor
* @param _neighborhoodSize the size of the neighborhood
*/
moCudaEval(unsigned int _neighborhoodSize) {
neighborhoodSize = _neighborhoodSize;
host_FitnessArray = new Fitness[neighborhoodSize];
cudaMalloc((void**) &device_FitnessArray, neighborhoodSize
* sizeof(Fitness));
kernel_Dim = neighborhoodSize / BLOCK_SIZE + ((neighborhoodSize
% BLOCK_SIZE == 0) ? 0 : 1);
}
/**
* Destructor
*/
~moCudaEval() {
delete[] host_FitnessArray;
cudaFree(device_FitnessArray);
cudaFree(&device_solution);
}
/**
* Set fitness of a solution neighbors
*@param _sol the solution which generate the neighborhood
*@param _neighbor the current neighbor
*/
void operator()(EOT & _sol, Neighbor & _neighbor) {
_neighbor.fitness(host_FitnessArray[_neighbor.index()]);
}
/**
* Compute fitness for all Kswap solution neighbors in device
* @param _sol the solution which generate the neighborhood
* @param _mapping the neighborhood mapping
* @param _Kswap the number of swap
*/
virtual void neighborhoodKswapEval(EOT & _sol, unsigned * _mapping,
unsigned _Kswap) {
}
/**
* Compute fitness for all Kflip solution neighbors in device
* @param _sol the solution which generate the neighborhood
* @param _mapping the neighborhood mapping
* @param _Kflip the number of bit to flip
*/
virtual void neighborhoodKflipEval(EOT & _sol, unsigned * _mapping,
unsigned _Kflip) {
}
/**
* Compute fitness for all solution neighbors in device
* @param _sol the solution which generate the neighborhood
*/
virtual void neighborhoodEval(EOT & _sol)=0;
protected:
//the host array to save all neighbors fitness
Fitness * host_FitnessArray;
//the device array to save neighbors fitness computed in device
Fitness * device_FitnessArray;
//the device solution
EOT device_solution;
//the size of neighborhood
unsigned int neighborhoodSize;
//Cuda kernel dimension
int kernel_Dim;
};
#endif

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@ -1,84 +0,0 @@
/*
<moCudaEvalFunc.h>
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
Thé Van LUONG, Karima Boufaras
This software is governed by the CeCILL license under French law and
abiding by the rules of distribution of free software. You can use,
modify and/ or redistribute the software under the terms of the CeCILL
license as circulated by CEA, CNRS and INRIA at the following URL
"http://www.cecill.info".
As a counterpart to the access to the source code and rights to copy,
modify and redistribute granted by the license, users are provided only
with a limited warranty and the software's author, the holder of the
economic rights, and the successive licensors have only limited liability.
In this respect, the user's attention is drawn to the risks associated
with loading, using, modifying and/or developing or reproducing the
software by the user in light of its specific status of free software,
that may mean that it is complicated to manipulate, and that also
therefore means that it is reserved for developers and experienced
professionals having in-depth computer knowledge. Users are therefore
encouraged to load and test the software's suitability as regards their
requirements in conditions enabling the security of their systems and/or
data to be ensured and, more generally, to use and operate it in the
same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
*/
#ifndef __moCudaEvalFunc_H
#define __moCudaEvalFunc_H
/**
* Abstract class for CUDA evaluation of neighbor
*/
template<class Neighbor>
class moCudaEvalFunc {
public:
/**
* Define type of a solution corresponding to Neighbor
*/
typedef typename Neighbor::EOT EOT;
typedef typename EOT::ElemType T;
typedef typename EOT::Fitness Fitness;
/**
* Constructor
*/
moCudaEvalFunc() {
}
/**
* Destructor
*/
~moCudaEvalFunc() {
}
/**
*Virtual functor to compute fitness of a solution neighbor
*@param _solution the solution which generate the neighborhood
*@param _fitness the current solution fitness
*@param _index the index neighbor
*/
virtual inline __host__ __device__ Fitness operator() (EOT & _solution,Fitness _fitness, unsigned int * _index){
return _fitness;
};
};
#endif

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@ -1,213 +0,0 @@
/*
<moCudaKswapEval.h>
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
Karima Boufaras, Thé Van LUONG
This software is governed by the CeCILL license under French law and
abiding by the rules of distribution of free software. You can use,
modify and/ or redistribute the software under the terms of the CeCILL
license as circulated by CEA, CNRS and INRIA at the following URL
"http://www.cecill.info".
As a counterpart to the access to the source code and rights to copy,
modify and redistribute granted by the license, users are provided only
with a limited warranty and the software's author, the holder of the
economic rights, and the successive licensors have only limited liability.
In this respect, the user's attention is drawn to the risks associated
with loading, using, modifying and/or developing or reproducing the
software by the user in light of its specific status of free software,
that may mean that it is complicated to manipulate, and that also
therefore means that it is reserved for developers and experienced
professionals having in-depth computer knowledge. Users are therefore
encouraged to load and test the software's suitability as regards their
requirements in conditions enabling the security of their systems and/or
data to be ensured and, more generally, to use and operate it in the
same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
*/
#ifndef moCudaKswapEval_H
#define moCudaKswapEval_H
#include <eval/moCudaEval.h>
#include <eval/moCudakernelEval.h>
/**
* class for the K-swap neighborhood evaluation
*/
template<class Neighbor, class IncrementEval>
class moCudaKswapEval: public moCudaEval<Neighbor> {
public:
/**
* Define type of a solution corresponding to Neighbor
*/
typedef typename Neighbor::EOT EOT;
/**
* Define type of a vector corresponding to Solution
*/
typedef typename EOT::ElemType T;
/**
* Define type of a fitness corresponding to Solution
*/
typedef typename EOT::Fitness Fitness;
using moCudaEval<Neighbor>::neighborhoodSize;
using moCudaEval<Neighbor>::host_FitnessArray;
using moCudaEval<Neighbor>::device_FitnessArray;
using moCudaEval<Neighbor>::device_solution;
using moCudaEval<Neighbor>::kernel_Dim;
/**
* Constructor
* @param _neighborhoodSize the size of the neighborhood
* @param _incrEval the incremental evaluation
*/
moCudaKswapEval(unsigned int _neighborhoodSize, IncrementEval & _incrEval) :
moCudaEval<Neighbor> (_neighborhoodSize), incrEval(_incrEval) {
mutex = false;
mutex_kswap = false;
}
/**
* Destructor
*/
~moCudaKswapEval() {
if (mutex_kswap) {
cudaFree(&device_setSolution);
cudaFree(&device_tmp);
delete[] vect;
}
}
/**
* Compute fitness for all solution neighbors in device without specific mapping
* @param _sol the solution which generate the neighborhood
*/
virtual void neighborhoodEval(EOT & _sol) {
}
/**
* Compute fitness for all solution neighbors in device with K-swap mapping
* @param _sol the solution which generate the neighborhood
* @param _mapping the array of mapping indexes for K-swap neighborhood
* @param _Kswap the number of swap
*/
void neighborhoodKswapEval(EOT & _sol, unsigned * _mapping, unsigned _Kswap) {
// the solution size
unsigned _size = _sol.size();
// Get Current solution fitness
Fitness fitness = _sol.fitness();
//Case of Permutation
if (_Kswap == 1) {
if (!mutex) {
//Allocate the space for solution in the device global memory
cudaMalloc((void**) &device_solution.vect, _size * sizeof(T));
mutex = true;
}
//Copy the solution vector from the host to device
cudaMemcpy(device_solution.vect, _sol.vect, _size * sizeof(T),
cudaMemcpyHostToDevice);
//Launch the Kernel to compute all permutation neighbors fitness
kernelPermutation<EOT,Fitness,Neighbor,IncrementEval><<<kernel_Dim,BLOCK_SIZE >>>(incrEval,device_solution,device_FitnessArray,fitness,neighborhoodSize,_mapping,_size);
//Copy the result from device to host
cudaMemcpy(host_FitnessArray, device_FitnessArray, neighborhoodSize
* sizeof(Fitness), cudaMemcpyDeviceToHost);
}
//Case Kswap
else if (_Kswap > 1) {
if (!mutex_kswap) {
vect = new T[neighborhoodSize * _size];
//Allocate the space for set of solution in the device global memory
cudaMalloc((void**) &device_setSolution.vect, neighborhoodSize
* _size * sizeof(T));
//Allocate the space to save temporary EOT element to swap
cudaMalloc((void**) &device_tmp.vect, neighborhoodSize
* sizeof(T));
mutex_kswap = true;
}
for (int i = 0; i < neighborhoodSize; i++) {
for (int j = 0; j < _size; j++) {
vect[j + i * _size] = _sol.vect[j];
}
}
//Copy the set of solution from the host to device
cudaMemcpy(device_setSolution.vect, vect, neighborhoodSize * _size
* sizeof(T), cudaMemcpyHostToDevice);
//Launch the Kernel to compute all Kswap neighbors fitness
kernelKswap<EOT,Fitness,Neighbor,IncrementEval><<<kernel_Dim,BLOCK_SIZE >>>(incrEval,device_setSolution,device_tmp,device_FitnessArray,fitness,neighborhoodSize,_mapping,_Kswap,_size);
//Copy the result from device to host
cudaMemcpy(host_FitnessArray, device_FitnessArray, neighborhoodSize
* sizeof(Fitness), cudaMemcpyDeviceToHost);
}
}
/**
* Compute fitness for all solution neighbors(K-flip of binary solution) in device
* @param _sol the solution which generate the neighborhood
* @param _mapping the array of mapping indexes for k-flip neighborhood
* @param _Kflip the number of flip to do
*/
void neighborhoodKflipEval(EOT & _sol, unsigned * _mapping,
unsigned _Kflip) {
// the solution size
unsigned _size = _sol.size();
// Get Current solution fitness
Fitness fitness = _sol.fitness();
if (!mutex) {
//Allocate the space for solution in the device global memory
cudaMalloc((void**) &device_solution.vect, _size * sizeof(T));
mutex = true;
}
//Copy the solution vector from the host to device
cudaMemcpy(device_solution.vect, _sol.vect, _size * sizeof(T),
cudaMemcpyHostToDevice);
//Launch the Kernel to compute all flip neighbors fitness
kernelKflip<EOT,Fitness,Neighbor,IncrementEval><<<kernel_Dim,BLOCK_SIZE >>>(incrEval,device_solution,device_FitnessArray,fitness,neighborhoodSize,_mapping,_Kflip);
//Copy the result from device to host
cudaMemcpy(host_FitnessArray, device_FitnessArray, neighborhoodSize
* sizeof(Fitness), cudaMemcpyDeviceToHost);
}
protected:
IncrementEval & incrEval;
//NeighborhoodSize copy of solution
EOT device_setSolution;
//NeighborhoodSize element of EOT
EOT device_tmp;
//Vector of neighborhoodSize copy of solution
T * vect;
bool mutex_kswap;
bool mutex;
};
#endif

113
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@ -1,113 +0,0 @@
/*
<moCudaVectorEval.h>
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
Karima Boufaras, Thé Van LUONG
This software is governed by the CeCILL license under French law and
abiding by the rules of distribution of free software. You can use,
modify and/ or redistribute the software under the terms of the CeCILL
license as circulated by CEA, CNRS and INRIA at the following URL
"http://www.cecill.info".
As a counterpart to the access to the source code and rights to copy,
modify and redistribute granted by the license, users are provided only
with a limited warranty and the software's author, the holder of the
economic rights, and the successive licensors have only limited liability.
In this respect, the user's attention is drawn to the risks associated
with loading, using, modifying and/or developing or reproducing the
software by the user in light of its specific status of free software,
that may mean that it is complicated to manipulate, and that also
therefore means that it is reserved for developers and experienced
professionals having in-depth computer knowledge. Users are therefore
encouraged to load and test the software's suitability as regards their
requirements in conditions enabling the security of their systems and/or
data to be ensured and, more generally, to use and operate it in the
same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
*/
#ifndef moCudaVectorEval_H
#define moCudavectorEval_H
#include <eval/moCudaEval.h>
#include <eval/moCudakernelEval.h>
/**
* class for the parallel evaluation of neighborhood without mapping
*/
template<class Neighbor, class IncrementEval>
class moCudaVectorEval: public moCudaEval<Neighbor> {
public:
/**
* Define type of a solution corresponding to Neighbor
*/
typedef typename Neighbor::EOT EOT;
/**
* Define type of a vector corresponding to Solution
*/
typedef typename EOT::ElemType T;
/**
* Define type of a fitness corresponding to Solution
*/
typedef typename EOT::Fitness Fitness;
using moCudaEval<Neighbor>::neighborhoodSize;
using moCudaEval<Neighbor>::host_FitnessArray;
using moCudaEval<Neighbor>::device_FitnessArray;
using moCudaEval<Neighbor>::device_solution;
using moCudaEval<Neighbor>::kernel_Dim;
/**
* Constructor
* @param _neighborhoodSize the size of the neighborhood
* @param _incrEval the incremental evaluation
*/
moCudaVectorEval(unsigned int _neighborhoodSize, IncrementEval & _incrEval) :
moCudaEval<Neighbor> (_neighborhoodSize), incrEval(_incrEval) {
}
/**
* Compute fitness for all solution neighbors in device
* @param _sol the solution which generate the neighborhood
*/
virtual void neighborhoodEval(EOT & _sol) {
// the solution vector size
unsigned _size = _sol.size();
// Get Current solution fitness
Fitness fitness = _sol.fitness();
//Allocate the space for solution in the global memory of device
cudaMalloc((void**) &device_solution.vect, _size * sizeof(T));
//Copy the solution vector from the host to device
cudaMemcpy(device_solution.vect, _sol.vect, _size * sizeof(T),
cudaMemcpyHostToDevice);
//Launch the Kernel to compute all neighbors fitness
kernelEval<EOT,Fitness,Neighbor,IncrementEval><<<kernel_Dim,BLOCK_SIZE >>>(incrEval,device_solution,device_FitnessArray,fitness,neighborhoodSize);
//Copy the result from device to host
cudaMemcpy(host_FitnessArray, device_FitnessArray, neighborhoodSize
* sizeof(Fitness), cudaMemcpyDeviceToHost);
}
protected:
IncrementEval & incrEval;
};
#endif

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