Remove PEO from master

This commit is contained in:
quemy 2012-08-30 11:57:43 +02:00
commit 948da627ea
185 changed files with 0 additions and 18909 deletions

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######################################################################################
### 0) Include headers
######################################################################################
include_directories(${EO_SRC_DIR}/src)
include_directories(${MO_SRC_DIR}/src)
include_directories(${MOEO_SRC_DIR}/src)
include_directories(${PEO_SRC_DIR}/src)
include_directories(${CMAKE_CURRENT_SOURCE_DIR})
######################################################################################
### 1) Set the compiler for MPI
######################################################################################
set(CMAKE_CXX_COMPILER mpicxx)
######################################################################################
### 2) Define test list
######################################################################################
set(TEST_RUN t-Mpdboot)
set(TEST_STOP t-Mpdallexit)
set(TEST_LIST
t-ParallelEval
t-ParallelTransform
t-MultiStart
t-PSOSelect
t-EAAsyncIsland
t-EASyncIsland
t-PSOGlobalBest
t-PSOWorstPosition
)
######################################################################################
### 3) Define your targets and link the librairies
######################################################################################
execute_process(
COMMAND ${CMAKE_COMMAND} -E copy_if_different
${CMAKE_CURRENT_SOURCE_DIR}/param
${CMAKE_CURRENT_BINARY_DIR}/param
COMMAND ${CMAKE_COMMAND} -E copy_if_different
${CMAKE_CURRENT_SOURCE_DIR}/schema.xml
${CMAKE_CURRENT_BINARY_DIR}/schema.xml)
foreach (test ${TEST_RUN} ${TEST_LIST} ${TEST_STOP})
set("T_${test}_SOURCES" "${test}.cpp")
add_executable(${test} ${T_${test}_SOURCES})
install(TARGETS ${test} RUNTIME DESTINATION local/share${INSTALL_SUB_DIR}/peo/test COMPONENT tests)
endforeach (test)
foreach (testrun ${TEST_RUN})
add_test(${testrun} ${testrun})
endforeach (testrun)
foreach (test ${TEST_LIST})
add_test(${test} "mpiexec" "-n" "4" "${CMAKE_CURRENT_BINARY_DIR}/${test}" "@param")
target_link_libraries(${test} peo xml2 rmc_mpi ga es eoutils eo peo)
endforeach (test)
foreach (teststop ${TEST_STOP})
add_test(${teststop} ${teststop})
endforeach (teststop)

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## miscallenous parameters
--debug=false
## deployment schema
--schema=schema.xml
## parameters
--inst=../examples/tsp/benchs/eil101.tsp

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<?xml version="1.0"?>
<schema>
<group scheduler="0">
<node name="0" num_workers="0">
</node>
<node name="1" num_workers="0">
<runner>1</runner>
<runner>2</runner>
</node>
<node name="2" num_workers="1">
</node>
<node name="3" num_workers="1">
</node>
</group>
</schema>

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/*
* <t-EAAsyncIsland.cpp>
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
* (C) OPAC Team, LIFL, 2002-2008
*
* Clive Canape
*
* This software is governed by the CeCILL license under French law and
* abiding by the rules of distribution of free software. You can use,
* modify and/ or redistribute the software under the terms of the CeCILL
* license as circulated by CEA, CNRS and INRIA at the following URL
* "http://www.cecill.info".
*
* As a counterpart to the access to the source code and rights to copy,
* modify and redistribute granted by the license, users are provided only
* with a limited warranty and the software's author, the holder of the
* economic rights, and the successive licensors have only limited liability.
*
* In this respect, the user's attention is drawn to the risks associated
* with loading, using, modifying and/or developing or reproducing the
* software by the user in light of its specific status of free software,
* that may mean that it is complicated to manipulate, and that also
* therefore means that it is reserved for developers and experienced
* professionals having in-depth computer knowledge. Users are therefore
* encouraged to load and test the software's suitability as regards their
* requirements in conditions enabling the security of their systems and/or
* peoData to be ensured and, more generally, to use and operate it in the
* same conditions as regards security.
* The fact that you are presently reading this means that you have had
* knowledge of the CeCILL license and that you accept its terms.
*
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
* Contact: paradiseo-help@lists.gforge.inria.fr
*
*/
//Test : Asynchronous island with EA
#include <peo>
#include <es.h>
typedef eoReal<double> Indi;
double f (const Indi & _indi)
{
double sum=_indi[0]+_indi[1];
return (-sum);
}
int main (int __argc, char *__argv[])
{
peo :: init( __argc, __argv );
if (getNodeRank()==1)
std::cout<<"\n\nTest : Asynchronous island with EA\n\n";
rng.reseed (10);
RingTopology topology;
eoGenContinue < Indi > genContPara (10);
eoCombinedContinue <Indi> continuatorPara (genContPara);
eoCheckPoint<Indi> checkpoint(continuatorPara);
peoEvalFunc<Indi> mainEval( f );
peoPopEval <Indi> eval(mainEval);
eoUniformGenerator < double >uGen (-2., 2.);
eoInitFixedLength < Indi > random (2, uGen);
eoRankingSelect<Indi> selectionStrategy;
eoSelectNumber<Indi> select(selectionStrategy,10);
eoSegmentCrossover<Indi> crossover;
eoUniformMutation<Indi> mutation(0.01);
peoTransform<Indi> transform(crossover,0.8,mutation,0.3);
/*p*/
eoPop < Indi > pop;
pop.append (10, random);
eoPlusReplacement<Indi> replace;
eoRandomSelect<Indi> mig_select_one;
eoSelector <Indi, eoPop<Indi> > mig_select (mig_select_one,2,pop);
eoReplace <Indi, eoPop<Indi> > mig_replace (replace,pop);
eoPeriodicContinue< Indi > mig_cont( 2 );
eoContinuator<Indi> cont(mig_cont, pop);
peoAsyncIslandMig<eoPop<Indi>, eoPop<Indi> > mig(cont,mig_select,mig_replace,topology);
checkpoint.add(mig);
eoEasyEA< Indi > eaAlg( checkpoint, eval, select, transform, replace );
peoWrapper parallelEA( eaAlg, pop);
eval.setOwner(parallelEA);
transform.setOwner(parallelEA);
mig.setOwner(parallelEA);
eoGenContinue < Indi > genContPara2 (10);
eoCombinedContinue <Indi> continuatorPara2 (genContPara2);
eoCheckPoint<Indi> checkpoint2(continuatorPara2);
peoEvalFunc<Indi> mainEval2( f );
peoPopEval <Indi> eval2(mainEval2);
eoUniformGenerator < double >uGen2 (-2., 2.);
eoInitFixedLength < Indi > random2 (2, uGen2);
eoRankingSelect<Indi> selectionStrategy2;
eoSelectNumber<Indi> select2(selectionStrategy2,10);
eoSegmentCrossover<Indi> crossover2;
eoUniformMutation<Indi> mutation2(0.01);
peoTransform<Indi> transform2(crossover2,0.8,mutation2,0.3);
/*p*/
eoPop < Indi > pop2;
pop2.append (10, random2);
eoPlusReplacement<Indi> replace2;
eoRandomSelect<Indi> mig_select_one2;
eoSelector <Indi, eoPop<Indi> > mig_select2 (mig_select_one2,2,pop2);
eoReplace <Indi, eoPop<Indi> > mig_replace2 (replace2,pop2);
eoPeriodicContinue< Indi > mig_cont2( 2 );
eoContinuator<Indi> cont2(mig_cont2, pop2);
peoAsyncIslandMig<eoPop<Indi>, eoPop<Indi> > mig2(cont2,mig_select2,mig_replace2,topology);
checkpoint2.add(mig2);
eoEasyEA< Indi > eaAlg2( checkpoint2, eval2, select2, transform2, replace2 );
peoWrapper parallelEA2( eaAlg2, pop2);
eval2.setOwner(parallelEA2);
transform2.setOwner(parallelEA2);
mig2.setOwner(parallelEA2);
peo :: run();
peo :: finalize();
if (getNodeRank()==1)
{
pop.sort();
pop2.sort();
std::cout << "Final population 1 :\n" << pop << std::endl;
std::cout << "Final population 2 :\n" << pop2 << std::endl;
}
}

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/*
* <t-EASyncIsland.cpp>
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
* (C) OPAC Team, LIFL, 2002-2008
*
* Clive Canape
*
* This software is governed by the CeCILL license under French law and
* abiding by the rules of distribution of free software. You can use,
* modify and/ or redistribute the software under the terms of the CeCILL
* license as circulated by CEA, CNRS and INRIA at the following URL
* "http://www.cecill.info".
*
* As a counterpart to the access to the source code and rights to copy,
* modify and redistribute granted by the license, users are provided only
* with a limited warranty and the software's author, the holder of the
* economic rights, and the successive licensors have only limited liability.
*
* In this respect, the user's attention is drawn to the risks associated
* with loading, using, modifying and/or developing or reproducing the
* software by the user in light of its specific status of free software,
* that may mean that it is complicated to manipulate, and that also
* therefore means that it is reserved for developers and experienced
* professionals having in-depth computer knowledge. Users are therefore
* encouraged to load and test the software's suitability as regards their
* requirements in conditions enabling the security of their systems and/or
* peoData to be ensured and, more generally, to use and operate it in the
* same conditions as regards security.
* The fact that you are presently reading this means that you have had
* knowledge of the CeCILL license and that you accept its terms.
*
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
* Contact: paradiseo-help@lists.gforge.inria.fr
*
*/
//Test : Synchronous island with EA
#include <peo>
#include <es.h>
typedef eoReal<double> Indi;
double f (const Indi & _indi)
{
double sum=_indi[0]+_indi[1];
return (-sum);
}
int main (int __argc, char *__argv[])
{
peo :: init( __argc, __argv );
if (getNodeRank()==1)
std::cout<<"\n\nTest : Synchronous island with EA\n\n";
rng.reseed (10);
RingTopology topology;
eoGenContinue < Indi > genContPara (10);
eoCombinedContinue <Indi> continuatorPara (genContPara);
eoCheckPoint<Indi> checkpoint(continuatorPara);
peoEvalFunc<Indi> mainEval( f );
peoPopEval <Indi> eval(mainEval);
eoUniformGenerator < double >uGen (-2., 2.);
eoInitFixedLength < Indi > random (2, uGen);
eoRankingSelect<Indi> selectionStrategy;
eoSelectNumber<Indi> select(selectionStrategy,10);
eoSegmentCrossover<Indi> crossover;
eoUniformMutation<Indi> mutation(0.01);
peoTransform<Indi> transform(crossover,0.8,mutation,0.3);
eoPop < Indi > pop;
pop.append (10, random);
eoPlusReplacement<Indi> replace;
eoRandomSelect<Indi> mig_select_one;
eoSelector <Indi, eoPop<Indi> > mig_select (mig_select_one,2,pop);
eoReplace <Indi, eoPop<Indi> > mig_replace (replace,pop);
peoSyncIslandMig<eoPop<Indi>, eoPop<Indi> > mig(2,mig_select,mig_replace,topology);
checkpoint.add(mig);
eoEasyEA< Indi > eaAlg( checkpoint, eval, select, transform, replace );
peoWrapper parallelEA( eaAlg, pop);
eval.setOwner(parallelEA);
transform.setOwner(parallelEA);
mig.setOwner(parallelEA);
eoGenContinue < Indi > genContPara2 (10);
eoCombinedContinue <Indi> continuatorPara2 (genContPara2);
eoCheckPoint<Indi> checkpoint2(continuatorPara2);
peoEvalFunc<Indi> mainEval2( f );
peoPopEval <Indi> eval2(mainEval2);
eoUniformGenerator < double >uGen2 (-2., 2.);
eoInitFixedLength < Indi > random2 (2, uGen2);
eoRankingSelect<Indi> selectionStrategy2;
eoSelectNumber<Indi> select2(selectionStrategy2,10);
eoSegmentCrossover<Indi> crossover2;
eoUniformMutation<Indi> mutation2(0.01);
peoTransform<Indi> transform2(crossover2,0.8,mutation2,0.3);
eoPop < Indi > pop2;
pop2.append (10, random2);
eoPlusReplacement<Indi> replace2;
eoRandomSelect<Indi> mig_select_one2;
eoSelector <Indi, eoPop<Indi> > mig_select2 (mig_select_one2,2,pop2);
eoReplace <Indi, eoPop<Indi> > mig_replace2 (replace2,pop2);
peoSyncIslandMig<eoPop<Indi>, eoPop<Indi> > mig2(2,mig_select2,mig_replace2,topology);
checkpoint2.add(mig2);
eoEasyEA< Indi > eaAlg2( checkpoint2, eval2, select2, transform2, replace2 );
peoWrapper parallelEA2( eaAlg2, pop2);
eval2.setOwner(parallelEA2);
transform2.setOwner(parallelEA2);
mig2.setOwner(parallelEA2);
peo :: run();
peo :: finalize();
if (getNodeRank()==1)
{
pop.sort();
pop2.sort();
std::cout << "Final population 1 :\n" << pop << std::endl;
std::cout << "Final population 2 :\n" << pop2 << std::endl;
}
}

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/*
* <t-Mpdallexit.cpp>
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
* (C) OPAC Team, LIFL, 2002-2008
*
* Clive Canape
*
* This software is governed by the CeCILL license under French law and
* abiding by the rules of distribution of free software. You can use,
* modify and/ or redistribute the software under the terms of the CeCILL
* license as circulated by CEA, CNRS and INRIA at the following URL
* "http://www.cecill.info".
*
* As a counterpart to the access to the source code and rights to copy,
* modify and redistribute granted by the license, users are provided only
* with a limited warranty and the software's author, the holder of the
* economic rights, and the successive licensors have only limited liability.
*
* In this respect, the user's attention is drawn to the risks associated
* with loading, using, modifying and/or developing or reproducing the
* software by the user in light of its specific status of free software,
* that may mean that it is complicated to manipulate, and that also
* therefore means that it is reserved for developers and experienced
* professionals having in-depth computer knowledge. Users are therefore
* encouraged to load and test the software's suitability as regards their
* requirements in conditions enabling the security of their systems and/or
* peoData to be ensured and, more generally, to use and operate it in the
* same conditions as regards security.
* The fact that you are presently reading this means that you have had
* knowledge of the CeCILL license and that you accept its terms.
*
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
* Contact: paradiseo-help@lists.gforge.inria.fr
*
*/
#include <iostream>
#include <stdlib.h>
int main (int __argc, char *__argv[])
{
int success = system("mpdallexit");
}

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/*
* <t-Mpdboot.cpp>
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
* (C) OPAC Team, LIFL, 2002-2008
*
* Clive Canape
*
* This software is governed by the CeCILL license under French law and
* abiding by the rules of distribution of free software. You can use,
* modify and/ or redistribute the software under the terms of the CeCILL
* license as circulated by CEA, CNRS and INRIA at the following URL
* "http://www.cecill.info".
*
* As a counterpart to the access to the source code and rights to copy,
* modify and redistribute granted by the license, users are provided only
* with a limited warranty and the software's author, the holder of the
* economic rights, and the successive licensors have only limited liability.
*
* In this respect, the user's attention is drawn to the risks associated
* with loading, using, modifying and/or developing or reproducing the
* software by the user in light of its specific status of free software,
* that may mean that it is complicated to manipulate, and that also
* therefore means that it is reserved for developers and experienced
* professionals having in-depth computer knowledge. Users are therefore
* encouraged to load and test the software's suitability as regards their
* requirements in conditions enabling the security of their systems and/or
* peoData to be ensured and, more generally, to use and operate it in the
* same conditions as regards security.
* The fact that you are presently reading this means that you have had
* knowledge of the CeCILL license and that you accept its terms.
*
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
* Contact: paradiseo-help@lists.gforge.inria.fr
*
*/
#include <iostream>
#include <stdlib.h>
int main (int __argc, char *__argv[])
{
int success = system("mpdboot");
}

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/*
* <t-MultiStart.cpp>
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
* (C) OPAC Team, LIFL, 2002-2008
*
* Clive Canape
*
* This software is governed by the CeCILL license under French law and
* abiding by the rules of distribution of free software. You can use,
* modify and/ or redistribute the software under the terms of the CeCILL
* license as circulated by CEA, CNRS and INRIA at the following URL
* "http://www.cecill.info".
*
* As a counterpart to the access to the source code and rights to copy,
* modify and redistribute granted by the license, users are provided only
* with a limited warranty and the software's author, the holder of the
* economic rights, and the successive licensors have only limited liability.
*
* In this respect, the user's attention is drawn to the risks associated
* with loading, using, modifying and/or developing or reproducing the
* software by the user in light of its specific status of free software,
* that may mean that it is complicated to manipulate, and that also
* therefore means that it is reserved for developers and experienced
* professionals having in-depth computer knowledge. Users are therefore
* encouraged to load and test the software's suitability as regards their
* requirements in conditions enabling the security of their systems and/or
* peoData to be ensured and, more generally, to use and operate it in the
* same conditions as regards security.
* The fact that you are presently reading this means that you have had
* knowledge of the CeCILL license and that you accept its terms.
*
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
* Contact: paradiseo-help@lists.gforge.inria.fr
*
*/
// Test : multistart
#include <peo>
struct Algorithm
{
void operator()(double & _d)
{
_d = _d * _d;
}
};
int main (int __argc, char * * __argv)
{
peo :: init (__argc, __argv);
if (getNodeRank()==1)
std::cout<<"\n\nTest : multistart\n\n";
std::vector < double > v;
if (getNodeRank()==1)
std::cout<<"\n\nBefore :";
for (unsigned i = 0; i< 10; i++)
{
v.push_back(i);
if (getNodeRank()==1)
std::cout<<"\n"<<v[i];
}
Algorithm algo;
peoMultiStart < double > initParallel (algo);
peoWrapper parallelAlgo (initParallel, v);
initParallel.setOwner(parallelAlgo);
peo :: run( );
peo :: finalize( );
if (getNodeRank()==1)
{
std::cout<<"\n\nAfter :\n";
for (unsigned i = 0; i< 10; i++)
std::cout<<v[i]<<"\n";
}
}

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/*
* <t-PSOGlobalBest.cpp>
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
* (C) OPAC Team, LIFL, 2002-2008
*
* Clive Canape
*
* This software is governed by the CeCILL license under French law and
* abiding by the rules of distribution of free software. You can use,
* modify and/ or redistribute the software under the terms of the CeCILL
* license as circulated by CEA, CNRS and INRIA at the following URL
* "http://www.cecill.info".
*
* As a counterpart to the access to the source code and rights to copy,
* modify and redistribute granted by the license, users are provided only
* with a limited warranty and the software's author, the holder of the
* economic rights, and the successive licensors have only limited liability.
*
* In this respect, the user's attention is drawn to the risks associated
* with loading, using, modifying and/or developing or reproducing the
* software by the user in light of its specific status of free software,
* that may mean that it is complicated to manipulate, and that also
* therefore means that it is reserved for developers and experienced
* professionals having in-depth computer knowledge. Users are therefore
* encouraged to load and test the software's suitability as regards their
* requirements in conditions enabling the security of their systems and/or
* peoData to be ensured and, more generally, to use and operate it in the
* same conditions as regards security.
* The fact that you are presently reading this means that you have had
* knowledge of the CeCILL license and that you accept its terms.
*
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
* Contact: paradiseo-help@lists.gforge.inria.fr
*
*/
// Test : PSO Global Best
#include <peo>
typedef eoRealParticle < double >Indi;
double f (const Indi & _indi)
{
double sum=_indi[0]+_indi[1];
return (sum);
}
int main (int __argc, char *__argv[])
{
peo :: init( __argc, __argv );
if (getNodeRank()==1)
std::cout<<"\n\nTest : PSO Global Best\n\n";
rng.reseed (10);
RingTopology topologyMig;
eoGenContinue < Indi > genContPara (10);
eoCombinedContinue <Indi> continuatorPara (genContPara);
eoCheckPoint<Indi> checkpoint(continuatorPara);
peoEvalFunc<Indi, double, const Indi& > plainEval(f);
peoPopEval< Indi > eval(plainEval);
eoUniformGenerator < double >uGen (0, 1.);
eoInitFixedLength < Indi > random (2, uGen);
eoUniformGenerator < double >sGen (-1., 1.);
eoVelocityInitFixedLength < Indi > veloRandom (2, sGen);
eoFirstIsBestInit < Indi > localInit;
eoRealVectorBounds bndsFlight(2,0,1.);
eoStandardFlight < Indi > flight(bndsFlight);
eoPop < Indi > pop;
pop.append (10, random);
eoLinearTopology<Indi> topology(2);
eoRealVectorBounds bnds(2,-1.,1.);
eoStandardVelocity < Indi > velocity (topology,1,0.5,2.,bnds);
eoInitializer <Indi> init(eval,veloRandom,localInit,topology,pop);
eoPeriodicContinue< Indi > mig_cont( 2 );
peoPSOSelect<Indi> mig_selec(topology);
peoGlobalBestVelocity<Indi> mig_replac (2.,velocity);
eoContinuator<Indi> cont(mig_cont, pop);
eoSelector <Indi, eoPop<Indi> > mig_select (mig_selec,1,pop);
eoReplace <Indi, eoPop<Indi> > mig_replace (mig_replac,pop);
eoGenContinue < Indi > genContPara2 (10);
eoCombinedContinue <Indi> continuatorPara2 (genContPara2);
eoCheckPoint<Indi> checkpoint2(continuatorPara2);
peoEvalFunc<Indi, double, const Indi& > plainEval2(f);
peoPopEval< Indi > eval2(plainEval2);
eoUniformGenerator < double >uGen2 (0, 1.);
eoInitFixedLength < Indi > random2 (2, uGen2);
eoUniformGenerator < double >sGen2 (-1., 1.);
eoVelocityInitFixedLength < Indi > veloRandom2 (2, sGen2);
eoFirstIsBestInit < Indi > localInit2;
eoRealVectorBounds bndsFlight2(2,0,1.);
eoStandardFlight < Indi > flight2(bndsFlight2);
eoPop < Indi > pop2;
pop2.append (10, random2);
eoLinearTopology<Indi> topology2(2);
eoRealVectorBounds bnds2(2,-1.,1.);
eoStandardVelocity < Indi > velocity2 (topology2,1,0.5,2.,bnds2);
eoInitializer <Indi> init2(eval2,veloRandom2,localInit2,topology2,pop2);
eoPeriodicContinue< Indi > mig_cont2( 2 );
peoPSOSelect<Indi> mig_selec2(topology2);
peoGlobalBestVelocity<Indi> mig_replac2 (2.,velocity2);
eoContinuator<Indi> cont2(mig_cont2,pop2);
eoSelector <Indi, eoPop<Indi> > mig_select2 (mig_selec2,1,pop2);
eoReplace <Indi, eoPop<Indi> > mig_replace2 (mig_replac2,pop2);
peoAsyncIslandMig< eoPop<Indi>, eoPop<Indi> > mig(cont,mig_select, mig_replace, topologyMig);
checkpoint.add( mig );
peoAsyncIslandMig< eoPop<Indi>, eoPop<Indi> > mig2(cont2,mig_select2, mig_replace2, topologyMig);
checkpoint2.add( mig2 );
eoSyncEasyPSO <Indi> psa(init,checkpoint,eval, velocity, flight);
peoWrapper parallelPSO( psa, pop);
eval.setOwner(parallelPSO);
mig.setOwner(parallelPSO);
eoSyncEasyPSO <Indi> psa2(init2,checkpoint2,eval2, velocity2, flight2);
peoWrapper parallelPSO2( psa2, pop2);
eval2.setOwner(parallelPSO2);
mig2.setOwner(parallelPSO2);
peo :: run();
peo :: finalize();
if (getNodeRank()==1)
{
pop.sort();
pop2.sort();
std::cout << "Final population :\n" << pop << std::endl;
std::cout << "Final population :\n" << pop2 << std::endl;
}
}

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/*
* <t-PSOSelect.cpp>
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
* (C) OPAC Team, LIFL, 2002-2008
*
* Clive Canape
*
* This software is governed by the CeCILL license under French law and
* abiding by the rules of distribution of free software. You can use,
* modify and/ or redistribute the software under the terms of the CeCILL
* license as circulated by CEA, CNRS and INRIA at the following URL
* "http://www.cecill.info".
*
* As a counterpart to the access to the source code and rights to copy,
* modify and redistribute granted by the license, users are provided only
* with a limited warranty and the software's author, the holder of the
* economic rights, and the successive licensors have only limited liability.
*
* In this respect, the user's attention is drawn to the risks associated
* with loading, using, modifying and/or developing or reproducing the
* software by the user in light of its specific status of free software,
* that may mean that it is complicated to manipulate, and that also
* therefore means that it is reserved for developers and experienced
* professionals having in-depth computer knowledge. Users are therefore
* encouraged to load and test the software's suitability as regards their
* requirements in conditions enabling the security of their systems and/or
* peoData to be ensured and, more generally, to use and operate it in the
* same conditions as regards security.
* The fact that you are presently reading this means that you have had
* knowledge of the CeCILL license and that you accept its terms.
*
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
* Contact: paradiseo-help@lists.gforge.inria.fr
*
*/
//Test : PSO select
#include <peo>
typedef eoRealParticle < double >Indi;
double f (const Indi & _indi)
{
double sum=_indi[0]+_indi[1];
return (-sum);
}
int main (int __argc, char *__argv[])
{
std::cout<<"\n\nTest : PSO select\n\n";
rng.reseed (10);
peoEvalFunc<Indi, double, const Indi& > plainEval(f);
eoEvalFuncCounter < Indi > firstEval(plainEval);
eoPopLoopEval < Indi > eval(firstEval);
eoUniformGenerator < double >uGen (1, 2);
eoInitFixedLength < Indi > random (2, uGen);
eoUniformGenerator < double >sGen (-1, 1);
eoVelocityInitFixedLength < Indi > veloRandom (2, sGen);
eoFirstIsBestInit < Indi > localInit;
eoRealVectorBounds bndsFlight(2,1,2);
eoStandardFlight < Indi > flight(bndsFlight);
eoLinearTopology<Indi> topology(6);
eoRealVectorBounds bnds(2,-1,1);
eoStandardVelocity < Indi > velocity (topology,1,0.5,2.,bnds);
eoPop < Indi > empty_pop,pop(20, random);
eoInitializer <Indi> init(eval,veloRandom,localInit,topology,pop);
init();
eval (empty_pop,pop);
peoPSOSelect<Indi> mig_selec(topology);
pop.sort();
std::cout<<"\nBest : "<<pop[0]<<" = "<<mig_selec(pop)<<"\n\n";
}

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/*
* <t-PSOWorstPosition.cpp>
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
* (C) OPAC Team, LIFL, 2002-2008
*
* Clive Canape
*
* This software is governed by the CeCILL license under French law and
* abiding by the rules of distribution of free software. You can use,
* modify and/ or redistribute the software under the terms of the CeCILL
* license as circulated by CEA, CNRS and INRIA at the following URL
* "http://www.cecill.info".
*
* As a counterpart to the access to the source code and rights to copy,
* modify and redistribute granted by the license, users are provided only
* with a limited warranty and the software's author, the holder of the
* economic rights, and the successive licensors have only limited liability.
*
* In this respect, the user's attention is drawn to the risks associated
* with loading, using, modifying and/or developing or reproducing the
* software by the user in light of its specific status of free software,
* that may mean that it is complicated to manipulate, and that also
* therefore means that it is reserved for developers and experienced
* professionals having in-depth computer knowledge. Users are therefore
* encouraged to load and test the software's suitability as regards their
* requirements in conditions enabling the security of their systems and/or
* peoData to be ensured and, more generally, to use and operate it in the
* same conditions as regards security.
* The fact that you are presently reading this means that you have had
* knowledge of the CeCILL license and that you accept its terms.
*
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
* Contact: paradiseo-help@lists.gforge.inria.fr
*
*/
// Test : PSO Worst Position
#include <peo>
typedef eoRealParticle < double >Indi;
double f (const Indi & _indi)
{
double sum=_indi[0]+_indi[1];
return (sum);
}
int main (int __argc, char *__argv[])
{
peo :: init( __argc, __argv );
if (getNodeRank()==1)
std::cout<<"\n\nTest : PSO Worst Position\n\n";
rng.reseed (10);
RingTopology topologyMig;
eoGenContinue < Indi > genContPara (10);
eoCombinedContinue <Indi> continuatorPara (genContPara);
eoCheckPoint<Indi> checkpoint(continuatorPara);
peoEvalFunc<Indi, double, const Indi& > plainEval(f);
peoPopEval< Indi > eval(plainEval);
eoUniformGenerator < double >uGen (0, 1.);
eoInitFixedLength < Indi > random (2, uGen);
eoUniformGenerator < double >sGen (-1., 1.);
eoVelocityInitFixedLength < Indi > veloRandom (2, sGen);
eoFirstIsBestInit < Indi > localInit;
eoRealVectorBounds bndsFlight(2,0,1.);
eoStandardFlight < Indi > flight(bndsFlight);
eoPop < Indi > pop;
pop.append (10, random);
eoLinearTopology<Indi> topology(2);
eoRealVectorBounds bnds(2,-1.,1.);
eoStandardVelocity < Indi > velocity (topology,1,0.5,2.,bnds);
eoInitializer <Indi> init(eval,veloRandom,localInit,topology,pop);
eoPeriodicContinue< Indi > mig_cont( 2 );
peoPSOSelect<Indi> mig_selec(topology);
peoWorstPositionReplacement<Indi> mig_replac;
eoContinuator<Indi> cont(mig_cont, pop);
eoSelector <Indi, eoPop<Indi> > mig_select (mig_selec,1,pop);
eoReplace <Indi, eoPop<Indi> > mig_replace (mig_replac,pop);
eoGenContinue < Indi > genContPara2 (10);
eoCombinedContinue <Indi> continuatorPara2 (genContPara2);
eoCheckPoint<Indi> checkpoint2(continuatorPara2);
peoEvalFunc<Indi, double, const Indi& > plainEval2(f);
peoPopEval< Indi > eval2(plainEval2);
eoUniformGenerator < double >uGen2 (0, 1.);
eoInitFixedLength < Indi > random2 (2, uGen2);
eoUniformGenerator < double >sGen2 (-1., 1.);
eoVelocityInitFixedLength < Indi > veloRandom2 (2, sGen2);
eoFirstIsBestInit < Indi > localInit2;
eoRealVectorBounds bndsFlight2(2,0,1.);
eoStandardFlight < Indi > flight2(bndsFlight2);
eoPop < Indi > pop2;
pop2.append (10, random2);
eoLinearTopology<Indi> topology2(2);
eoRealVectorBounds bnds2(2,-1.,1.);
eoStandardVelocity < Indi > velocity2 (topology2,1,0.5,2.,bnds2);
eoInitializer <Indi> init2(eval2,veloRandom2,localInit2,topology2,pop2);
eoPeriodicContinue< Indi > mig_cont2( 2 );
peoPSOSelect<Indi> mig_selec2(topology2);
peoWorstPositionReplacement<Indi> mig_replac2;
eoContinuator<Indi> cont2(mig_cont2,pop2);
eoSelector <Indi, eoPop<Indi> > mig_select2 (mig_selec2,1,pop2);
eoReplace <Indi, eoPop<Indi> > mig_replace2 (mig_replac2,pop2);
peoAsyncIslandMig< eoPop<Indi>, eoPop<Indi> > mig(cont,mig_select, mig_replace, topologyMig);
checkpoint.add( mig );
peoAsyncIslandMig< eoPop<Indi>, eoPop<Indi> > mig2(cont2,mig_select2, mig_replace2, topologyMig);
checkpoint2.add( mig2 );
eoSyncEasyPSO <Indi> psa(init,checkpoint,eval, velocity, flight);
peoWrapper parallelPSO( psa, pop);
eval.setOwner(parallelPSO);
mig.setOwner(parallelPSO);
eoSyncEasyPSO <Indi> psa2(init2,checkpoint2,eval2, velocity2, flight2);
peoWrapper parallelPSO2( psa2, pop2);
eval2.setOwner(parallelPSO2);
mig2.setOwner(parallelPSO2);
peo :: run();
peo :: finalize();
if (getNodeRank()==1)
{
pop.sort();
pop2.sort();
std::cout << "Final population :\n" << pop << std::endl;
std::cout << "Final population :\n" << pop2 << std::endl;
}
}

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/*
* <t-ParallelEval.cpp>
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
* (C) OPAC Team, LIFL, 2002-2008
*
* Clive Canape
*
* This software is governed by the CeCILL license under French law and
* abiding by the rules of distribution of free software. You can use,
* modify and/ or redistribute the software under the terms of the CeCILL
* license as circulated by CEA, CNRS and INRIA at the following URL
* "http://www.cecill.info".
*
* As a counterpart to the access to the source code and rights to copy,
* modify and redistribute granted by the license, users are provided only
* with a limited warranty and the software's author, the holder of the
* economic rights, and the successive licensors have only limited liability.
*
* In this respect, the user's attention is drawn to the risks associated
* with loading, using, modifying and/or developing or reproducing the
* software by the user in light of its specific status of free software,
* that may mean that it is complicated to manipulate, and that also
* therefore means that it is reserved for developers and experienced
* professionals having in-depth computer knowledge. Users are therefore
* encouraged to load and test the software's suitability as regards their
* requirements in conditions enabling the security of their systems and/or
* peoData to be ensured and, more generally, to use and operate it in the
* same conditions as regards security.
* The fact that you are presently reading this means that you have had
* knowledge of the CeCILL license and that you accept its terms.
*
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
* Contact: paradiseo-help@lists.gforge.inria.fr
*
*/
// Test : parallel evaluation
#include <peo>
#include <es.h>
typedef eoReal<double> Indi;
double f (const Indi & _indi)
{
double sum=_indi[0]+_indi[1];
return (-sum);
}
struct Algorithm
{
Algorithm( peoPopEval < Indi > & _eval): eval( _eval ){}
void operator()(eoPop < Indi > & _pop)
{
eoPop < Indi > empty_pop;
eval(empty_pop, _pop);
}
peoPopEval < Indi > & eval;
};
int main (int __argc, char *__argv[])
{
peo :: init( __argc, __argv );
if (getNodeRank()==1)
std::cout<<"\n\nTest : parallel evaluation\n\n";
rng.reseed (10);
peoEvalFunc<Indi, double, const Indi& > plainEval(f);
peoPopEval< Indi > eval(plainEval);
eoUniformGenerator < double >uGen (0, 1);
eoInitFixedLength < Indi > random (2, uGen);
eoPop < Indi > pop(20, random);
Algorithm algo ( eval );
peoWrapper parallelAlgo( algo, pop);
eval.setOwner(parallelAlgo);
peo :: run();
peo :: finalize();
if (getNodeRank()==1)
{
pop.sort();
std::cout<<pop;
}
}

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/*
* <t-ParallelTransform.cpp>
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
* (C) OPAC Team, LIFL, 2002-2008
*
* Clive Canape
*
* This software is governed by the CeCILL license under French law and
* abiding by the rules of distribution of free software. You can use,
* modify and/ or redistribute the software under the terms of the CeCILL
* license as circulated by CEA, CNRS and INRIA at the following URL
* "http://www.cecill.info".
*
* As a counterpart to the access to the source code and rights to copy,
* modify and redistribute granted by the license, users are provided only
* with a limited warranty and the software's author, the holder of the
* economic rights, and the successive licensors have only limited liability.
*
* In this respect, the user's attention is drawn to the risks associated
* with loading, using, modifying and/or developing or reproducing the
* software by the user in light of its specific status of free software,
* that may mean that it is complicated to manipulate, and that also
* therefore means that it is reserved for developers and experienced
* professionals having in-depth computer knowledge. Users are therefore
* encouraged to load and test the software's suitability as regards their
* requirements in conditions enabling the security of their systems and/or
* peoData to be ensured and, more generally, to use and operate it in the
* same conditions as regards security.
* The fact that you are presently reading this means that you have had
* knowledge of the CeCILL license and that you accept its terms.
*
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
* Contact: paradiseo-help@lists.gforge.inria.fr
*
*/
// Test : parallel transform
#include <peo>
#include <es.h>
typedef eoReal<double> Indi;
double f (const Indi & _indi)
{
double sum=_indi[0]+_indi[1];
return (-sum);
}
struct Algorithm
{
Algorithm( eoEvalFunc < Indi > & _eval, eoSelect < Indi > & _select, peoTransform < Indi > & _transform):
loopEval(_eval),
eval(loopEval),
selectTransform( _select, _transform),
breed(selectTransform) {}
void operator()(eoPop < Indi > & _pop)
{
eoPop < Indi > offspring, empty_pop;
eval(empty_pop, _pop);
eval(empty_pop, offspring);
std::cout<<"\n\nBefore :\n"<<offspring;
breed(_pop, offspring);
eval(empty_pop, offspring);
std::cout<<"\n\nAfter :\n"<<offspring;
}
eoPopLoopEval < Indi > loopEval;
eoPopEvalFunc < Indi > & eval;
eoSelectTransform < Indi > selectTransform;
eoBreed < Indi > & breed;
};
int main (int __argc, char *__argv[])
{
peo :: init( __argc, __argv );
if (getNodeRank()==1)
std::cout<<"\n\nTest : parallel transform\n\n";
rng.reseed (10);
eoEvalFuncPtr < Indi > plainEval(f);
eoEvalFuncCounter < Indi > eval(plainEval);
eoUniformGenerator < double >uGen (0, 1);
eoInitFixedLength < Indi > random (2, uGen);
eoPop < Indi > empty_pop,pop(6, random);
eoRankingSelect < Indi > selectionStrategy;
eoSelectNumber < Indi > select(selectionStrategy,6);
eoSegmentCrossover < Indi > crossover;
eoUniformMutation < Indi > mutation(0.01);
peoTransform<Indi> transform(crossover,0.8,mutation,0.3);
Algorithm algo ( eval, select, transform );
peoWrapper parallelAlgo( algo, pop);
transform.setOwner(parallelAlgo);
peo :: run();
peo :: finalize();
}