add Lesson2

git-svn-id: svn://scm.gforge.inria.fr/svnroot/paradiseo@963 331e1502-861f-0410-8da2-ba01fb791d7f

trunk/paradiseo-moeo/tutorial/Lesson2/CMakeLists.txt

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+
+######################################################################################
+### 0) Copy the FlowShop.param file in the build path for an easy use.
+######################################################################################
+
+ADD_CUSTOM_TARGET(install DEPENDS ${ParadisEO-MOEO_SOURCE_DIR}/tutorial/Lesson2/FlowShopEA.param)
+ADD_CUSTOM_COMMAND(
+    TARGET install
+    POST_BUILD
+    COMMAND ${CMAKE_COMMAND}
+    ARGS -E copy_if_different
+      ${ParadisEO-MOEO_SOURCE_DIR}/tutorial/Lesson2/FlowShopEA.param
+      ${ParadisEO-MOEO_BINARY_DIR}/tutorial/Lesson2)
+######################################################################################
+
+
+
+######################################################################################
+### 1) Include the sources
+######################################################################################
+
+INCLUDE_DIRECTORIES(${EO_SRC_DIR}/src)
+INCLUDE_DIRECTORIES(${ParadisEO-MOEO_SOURCE_DIR}/src)
+INCLUDE_DIRECTORIES(${FLOWSHOP_SRC_DIR})
+
+######################################################################################
+
+
+
+######################################################################################
+### 2) Specify where CMake can find the libraries
+######################################################################################
+
+IF(NOT WIN32 OR CYGWIN)  
+  LINK_DIRECTORIES(${EO_BIN_DIR}/lib ${ParadisEO-MOEO_BINARY_DIR}/lib ${FLOWSHOP_BINARY_DIR}/lib)
+ENDIF(NOT WIN32 OR CYGWIN)
+
+# especially for Visual Studio
+IF(WIN32 AND NOT CYGWIN)  
+  	LINK_DIRECTORIES(${EO_BIN_DIR}\\lib\\${CMAKE_BUILD_TYPE} ${ParadisEO-MOEO_BINARY_DIR}\\lib\\${CMAKE_BUILD_TYPE} ${FLOWSHOP_BINARY_DIR}\\lib\\${CMAKE_BUILD_TYPE})
+ENDIF(WIN32 AND NOT CYGWIN) 
+
+######################################################################################
+
+
+
+######################################################################################
+### 3) Define your target(s): just an executable here
+######################################################################################
+
+ADD_EXECUTABLE(FlowShopEA FlowShopEA.cpp)
+ADD_DEPENDENCIES(FlowShopEA flowshop moeo)
+######################################################################################
+
+
+
+######################################################################################
+### 4) Optionnal: define your target(s)'s version: no effect for windows
+######################################################################################
+
+SET(FLOWSHOPEA_VERSION ${GLOBAL_VERSION})
+SET_TARGET_PROPERTIES(FlowShopEA PROPERTIES VERSION "${FLOWSHOPEA_VERSION}")
+######################################################################################
+
+
+
+######################################################################################
+### 5) Link the librairies for your target(s)
+######################################################################################
+
+
+TARGET_LINK_LIBRARIES(FlowShopEA moeo flowshop eo eoutils)
+
+######################################################################################

trunk/paradiseo-moeo/tutorial/Lesson2/FlowShopEA.cpp

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+/*
+* <FlowShopEA.cpp>
+* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
+* (C) OPAC Team, LIFL, 2002-2007
+*
+* Arnaud Liefooghe
+*
+* This software is governed by the CeCILL license under French law and
+* abiding by the rules of distribution of free software.  You can  use,
+* modify and/ or redistribute the software under the terms of the CeCILL
+* license as circulated by CEA, CNRS and INRIA at the following URL
+* "http://www.cecill.info".
+*
+* As a counterpart to the access to the source code and  rights to copy,
+* modify and redistribute granted by the license, users are provided only
+* with a limited warranty  and the software's author,  the holder of the
+* economic rights,  and the successive licensors  have only  limited liability.
+*
+* In this respect, the user's attention is drawn to the risks associated
+* with loading,  using,  modifying and/or developing or reproducing the
+* software by the user in light of its specific status of free software,
+* that may mean  that it is complicated to manipulate,  and  that  also
+* therefore means  that it is reserved for developers  and  experienced
+* professionals having in-depth computer knowledge. Users are therefore
+* encouraged to load and test the software's suitability as regards their
+* requirements in conditions enabling the security of their systems and/or
+* data to be ensured and,  more generally, to use and operate it in the
+* same conditions as regards security.
+* The fact that you are presently reading this means that you have had
+* knowledge of the CeCILL license and that you accept its terms.
+*
+* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
+* Contact: paradiseo-help@lists.gforge.inria.fr
+*
+*/
+//-----------------------------------------------------------------------------
+
+
+// moeo general include
+#include <moeo>
+// for the creation of an evaluator
+#include <make_eval_FlowShop.h>
+// for the creation of an initializer
+#include <make_genotype_FlowShop.h>
+// for the creation of the variation operators
+#include <make_op_FlowShop.h>
+// how to initialize the population
+#include <do/make_pop.h>
+// the stopping criterion
+#include <do/make_continue_moeo.h>
+// outputs (stats, population dumps, ...)
+#include <do/make_checkpoint_moeo.h>
+// evolution engine (selection and replacement)
+#include <do/make_ea_moeo.h>
+// simple call to the algo
+#include <do/make_run.h>
+// checks for help demand, and writes the status file and make_help; in libutils
+void make_help(eoParser & _parser);
+// definition of the representation
+#include <FlowShop.h>
+
+
+using namespace std;
+
+
+int main(int argc, char* argv[])
+{
+    try
+    {
+
+        eoParser parser(argc, argv);  // for user-parameter reading
+        eoState state;                // to keep all things allocated
+
+
+        /*** the representation-dependent things ***/
+
+        // The fitness evaluation
+        eoEvalFuncCounter<FlowShop>& eval = do_make_eval(parser, state);
+        // the genotype (through a genotype initializer)
+        eoInit<FlowShop>& init = do_make_genotype(parser, state);
+        // the variation operators
+        eoGenOp<FlowShop>& op = do_make_op(parser, state);
+
+
+        /*** the representation-independent things ***/
+
+        // initialization of the population
+        eoPop<FlowShop>& pop = do_make_pop(parser, state, init);
+        // definition of the archive
+        moeoArchive<FlowShop> arch;
+        // stopping criteria
+        unsigned int maxGen = parser.createParam((unsigned int)(100), "maxGen", "Maximum number of gen.",'G',"Stopping criterion").value();
+        eoGenContinue<FlowShop> term(maxGen);
+        // checkpointing
+        eoCheckPoint<FlowShop> checkpoint(term);
+        moeoArchiveUpdater < FlowShop > updater(arch, pop);
+        checkpoint.add(updater);
+        // fitness assignment
+        moeoFastNonDominatedSortingFitnessAssignment <FlowShop> fitnessAssignment;
+        // diversity preservation
+        moeoFrontByFrontCrowdingDiversityAssignment <FlowShop> diversityAssignment;
+        // comparator
+        moeoFitnessThenDiversityComparator <FlowShop> comparator;
+        // selection scheme
+        moeoDetTournamentSelect <FlowShop> select(comparator, 2);
+        // replacement scheme
+        moeoElitistReplacement <FlowShop> replace(fitnessAssignment, diversityAssignment, comparator);
+        // breeder
+        eoGeneralBreeder <FlowShop> breed(select, op);
+        // algorithm
+        moeoEasyEA <FlowShop> algo (checkpoint, eval, breed, replace, fitnessAssignment, diversityAssignment);
+
+
+        /*** Go ! ***/
+
+        // help ?
+        make_help(parser);
+
+        // first evalution
+        apply<FlowShop>(eval, pop);
+
+        // printing of the initial population
+        cout << "Initial Population\n";
+        pop.sortedPrintOn(cout);
+        cout << endl;
+
+        // run the algo
+        do_run(algo, pop);
+
+        // printing of the final population
+        cout << "Final Population\n";
+        pop.sortedPrintOn(cout);
+        cout << endl;
+
+        // printing of the final archive
+        cout << "Final Archive\n";
+        arch.sortedPrintOn(cout);
+        cout << endl;
+
+
+    }
+    catch (exception& e)
+    {
+        cout << e.what() << endl;
+    }
+    return EXIT_SUCCESS;
+}

trunk/paradiseo-moeo/tutorial/Lesson2/FlowShopEA.param

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+
+######                 General    ######
+--help=0                                   # -h : Prints this message
+--stopOnUnknownParam=1                     # Stop if unkown param entered
+# --seed=1203083493                        # -S : Random number seed
+
+######    Evolution Engine        ######
+--popSize=100                              # -P : Population Size
+
+######    Representation          ######
+--BenchmarkFile=../examples/flowshop/benchs/020_10_01.txt # -B : Benchmark file name REQUIRED
+
+######    Stopping criterion      ######
+--maxGen=100                               # -G : Maximum number of generations
+
+######    Variation Operators     ######
+--crossRate=1                              # Relative rate for the only crossover
+--shiftMutRate=0.5                         # Relative rate for shift mutation
+--exchangeMutRate=0.5                      # Relative rate for exchange mutation
+--pCross=0.25                              # -c : Probability of Crossover
+--pMut=0.35                                # -m : Probability of Mutation