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git-svn-id: svn://scm.gforge.inria.fr/svnroot/paradiseo@1493 331e1502-861f-0410-8da2-ba01fb791d7f

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wcancino 2009-03-11 11:07:24 +00:00
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contribution/branches/PhyloMOEA/PhyloMOEA-serial/PhyloMOEA/PhyloMOEO_eval.h Normal file
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/***************************************************************************
* Copyright (C) 2008 by Waldo Cancino *
* wcancino@icmc.usp.br *
* *
* This program is free software; you can redistribute it and/or modify *
* it under the terms of the GNU General Public License as published by *
* the Free Software Foundation; either version 2 of the License, or *
* (at your option) any later version. *
* *
* This program is distributed in the hope that it will be useful, *
* but WITHOUT ANY WARRANTY; without even the implied warranty of *
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the *
* GNU General Public License for more details. *
* *
* You should have received a copy of the GNU General Public License *
* along with this program; if not, write to the *
* Free Software Foundation, Inc., *
* 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA. *
***************************************************************************/
#ifndef PHYLOMOEO_EVAL_H_
#define PHYLOMOEO_EVAL_H_
#include <PhyloMOEO.h>
#include <parsimonycalculator.h>
#include <likelihoodcalculator.h>
class PhyloEval : public moeoEvalFunc < PhyloMOEO >
{
public:
PhyloEval( ParsimonyCalculator &x, LikelihoodCalculator &y): parseval(x), likeval(y) { }
void operator () (PhyloMOEO & _sol)
{
if (_sol.invalidObjectiveVector())
{
ObjectiveVector objVec;
//if(! (_sol.get_tree().splits_valid() ) ) _sol.get_tree().calculate_splits();
parseval.set_tree(_sol.get_tree());
likeval.set_tree(_sol.get_tree());
//objVec[0] = 1;
//objVec[1] = 1;
objVec[0] = parseval.fitch();
objVec[1] = -likeval.calculate_likelihood();
_sol.objectiveVector(objVec);
}
}
private:
LikelihoodCalculator &likeval;
ParsimonyCalculator &parseval;
};
#endif