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fix doc: big update

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- use single doxyfile instead of one per module
- use a cleaner and more modern style
- reorder sections to put details first
- hide diagrams by default
- remove deprecated doxygen variables
- disable latex generation by default
- fix some doc typos
This commit is contained in:
Johann Dreo 2022-01-26 16:45:51 +01:00
commit 8948f0a3dc
18 changed files with 1038 additions and 92 deletions
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6
CMakeLists.txt
View file

@ -81,13 +81,15 @@ set(SMP "false" CACHE BOOL "Build the SMP module")
set(MPI "false" CACHE BOOL "Build the MPI module") set(MPI "false" CACHE BOOL "Build the MPI module")
## EO Module ## EO Module
set(EO_MODULE_NAME "Evolving Object") # set(EO_MODULE_NAME "Evolving Objects")
set(MODULE_NAME "Evolving Objects")
set(CMAKE_SOURCE_DIR ${EO_SRC_DIR}) set(CMAKE_SOURCE_DIR ${EO_SRC_DIR})
add_subdirectory(${EO_SRC_DIR}) add_subdirectory(${EO_SRC_DIR})
if(NOT EO_ONLY) if(NOT EO_ONLY)
## MO Module ## MO Module
set(MO_MODULE_NAME "Moving objects") # set(MO_MODULE_NAME "Moving Objects")
set(MODULE_NAME "Moving Objects")
set(CMAKE_SOURCE_DIR ${MO_SRC_DIR}) set(CMAKE_SOURCE_DIR ${MO_SRC_DIR})
add_subdirectory(${MO_SRC_DIR}) add_subdirectory(${MO_SRC_DIR})

226
DoxygenLayout.xml Normal file
View file

@ -0,0 +1,226 @@
<doxygenlayout version="1.0">
<!-- Generated by doxygen 1.8.17 -->
<!-- Navigation index tabs for HTML output -->
<navindex>
<tab type="mainpage" visible="yes" title=""/>
<tab type="pages" visible="yes" title="" intro=""/>
<tab type="modules" visible="yes" title="" intro=""/>
<tab type="namespaces" visible="yes" title="">
<tab type="namespacelist" visible="yes" title="" intro=""/>
<tab type="namespacemembers" visible="yes" title="" intro=""/>
</tab>
<tab type="interfaces" visible="yes" title="">
<tab type="interfacelist" visible="yes" title="" intro=""/>
<tab type="interfaceindex" visible="$ALPHABETICAL_INDEX" title=""/>
<tab type="interfacehierarchy" visible="yes" title="" intro=""/>
</tab>
<tab type="classes" visible="yes" title="">
<tab type="classlist" visible="yes" title="" intro=""/>
<tab type="classindex" visible="$ALPHABETICAL_INDEX" title=""/>
<tab type="hierarchy" visible="yes" title="" intro=""/>
<tab type="classmembers" visible="yes" title="" intro=""/>
</tab>
<tab type="structs" visible="yes" title="">
<tab type="structlist" visible="yes" title="" intro=""/>
<tab type="structindex" visible="$ALPHABETICAL_INDEX" title=""/>
</tab>
<tab type="exceptions" visible="yes" title="">
<tab type="exceptionlist" visible="yes" title="" intro=""/>
<tab type="exceptionindex" visible="$ALPHABETICAL_INDEX" title=""/>
<tab type="exceptionhierarchy" visible="yes" title="" intro=""/>
</tab>
<tab type="files" visible="yes" title="">
<tab type="filelist" visible="yes" title="" intro=""/>
<tab type="globals" visible="yes" title="" intro=""/>
</tab>
<tab type="examples" visible="yes" title="" intro=""/>
</navindex>
<!-- Layout definition for a class page -->
<class>
<briefdescription visible="yes"/>
<includes visible="$SHOW_INCLUDE_FILES"/>
<inheritancegraph visible="$CLASS_GRAPH"/>
<collaborationgraph visible="$COLLABORATION_GRAPH"/>
<detaileddescription title=""/>
<memberdecl>
<publicmethods title=""/>
<publicstaticmethods title=""/>
<publicattributes title=""/>
<publicstaticattributes title=""/>
<protectedtypes title=""/>
<protectedslots title=""/>
<protectedmethods title=""/>
<protectedstaticmethods title=""/>
<protectedattributes title=""/>
<protectedstaticattributes title=""/>
<nestedclasses visible="yes" title=""/>
<publictypes title=""/>
<services title=""/>
<interfaces title=""/>
<publicslots title=""/>
<signals title=""/>
<packagetypes title=""/>
<packagemethods title=""/>
<packagestaticmethods title=""/>
<packageattributes title=""/>
<packagestaticattributes title=""/>
<properties title=""/>
<events title=""/>
<privatetypes title=""/>
<privateslots title=""/>
<privatemethods title=""/>
<privatestaticmethods title=""/>
<privateattributes title=""/>
<privatestaticattributes title=""/>
<friends title=""/>
<related title="" subtitle=""/>
<membergroups visible="yes"/>
</memberdecl>
<memberdef>
<constructors title=""/>
<functions title=""/>
<related title=""/>
<variables title=""/>
<properties title=""/>
<inlineclasses title=""/>
<typedefs title=""/>
<enums title=""/>
<services title=""/>
<interfaces title=""/>
<events title=""/>
</memberdef>
<allmemberslink visible="yes"/>
<usedfiles visible="$SHOW_USED_FILES"/>
<authorsection visible="yes"/>
</class>
<!-- Layout definition for a namespace page -->
<namespace>
<briefdescription visible="yes"/>
<detaileddescription title=""/>
<memberdecl>
<nestednamespaces visible="yes" title=""/>
<constantgroups visible="yes" title=""/>
<interfaces visible="yes" title=""/>
<classes visible="yes" title=""/>
<structs visible="yes" title=""/>
<exceptions visible="yes" title=""/>
<typedefs title=""/>
<sequences title=""/>
<dictionaries title=""/>
<enums title=""/>
<functions title=""/>
<variables title=""/>
<membergroups visible="yes"/>
</memberdecl>
<memberdef>
<inlineclasses title=""/>
<typedefs title=""/>
<sequences title=""/>
<dictionaries title=""/>
<enums title=""/>
<functions title=""/>
<variables title=""/>
</memberdef>
<authorsection visible="yes"/>
</namespace>
<!-- Layout definition for a file page -->
<file>
<briefdescription visible="yes"/>
<includes visible="$SHOW_INCLUDE_FILES"/>
<includegraph visible="$INCLUDE_GRAPH"/>
<includedbygraph visible="$INCLUDED_BY_GRAPH"/>
<sourcelink visible="yes"/>
<detaileddescription title=""/>
<memberdecl>
<interfaces visible="yes" title=""/>
<classes visible="yes" title=""/>
<structs visible="yes" title=""/>
<exceptions visible="yes" title=""/>
<namespaces visible="yes" title=""/>
<constantgroups visible="yes" title=""/>
<defines title=""/>
<typedefs title=""/>
<sequences title=""/>
<dictionaries title=""/>
<enums title=""/>
<functions title=""/>
<variables title=""/>
<membergroups visible="yes"/>
</memberdecl>
<memberdef>
<inlineclasses title=""/>
<defines title=""/>
<typedefs title=""/>
<sequences title=""/>
<dictionaries title=""/>
<enums title=""/>
<functions title=""/>
<variables title=""/>
</memberdef>
<authorsection/>
</file>
<!-- Layout definition for a group page -->
<group>
<briefdescription visible="yes"/>
<groupgraph visible="$GROUP_GRAPHS"/>
<detaileddescription title=""/>
<memberdecl>
<nestedgroups visible="yes" title=""/>
<namespaces visible="yes" title=""/>
<functions title=""/>
<classes visible="yes" title=""/>
<defines title=""/>
<typedefs title=""/>
<dirs visible="yes" title=""/>
<files visible="yes" title=""/>
<sequences title=""/>
<dictionaries title=""/>
<enums title=""/>
<enumvalues title=""/>
<variables title=""/>
<signals title=""/>
<publicslots title=""/>
<protectedslots title=""/>
<privateslots title=""/>
<events title=""/>
<properties title=""/>
<friends title=""/>
<membergroups visible="yes"/>
</memberdecl>
<memberdef>
<pagedocs/>
<inlineclasses title=""/>
<defines title=""/>
<typedefs title=""/>
<sequences title=""/>
<dictionaries title=""/>
<enums title=""/>
<enumvalues title=""/>
<functions title=""/>
<variables title=""/>
<signals title=""/>
<publicslots title=""/>
<protectedslots title=""/>
<privateslots title=""/>
<events title=""/>
<properties title=""/>
<friends title=""/>
</memberdef>
<authorsection visible="yes"/>
</group>
<!-- Layout definition for a directory page -->
<directory>
<briefdescription visible="yes"/>
<directorygraph visible="yes"/>
<detaileddescription title=""/>
<memberdecl>
<dirs visible="yes"/>
<files visible="yes"/>
</memberdecl>
</directory>
</doxygenlayout>

4
README.md
View file

@ -206,6 +206,10 @@ If you `ENABLE_CMAKE_TESTING` and `BUILD_TESTING`, it will be the tests, which y
If you `ENABLE_CMAKE_EXAMPLE`, it will also build the examples. If you `ENABLE_CMAKE_EXAMPLE`, it will also build the examples.
If may want to make build scripts more verbose (especially when building the
doc) by enabling `CMAKE_VERBOSE_MAKEFILE`.
## Licenses ## Licenses
Paradiseo is distributed under the GNU Lesser General Public License and the CeCILL license (depending on the modules). Paradiseo is distributed under the GNU Lesser General Public License and the CeCILL license (depending on the modules).

83
eo/doc/eo.doxyfile.cmake → doxyfile.cmake
View file

@ -25,13 +25,13 @@ DOXYFILE_ENCODING = UTF-8
# The PROJECT_NAME tag is a single word (or a sequence of words surrounded # The PROJECT_NAME tag is a single word (or a sequence of words surrounded
# by quotes) that should identify the project. # by quotes) that should identify the project.
PROJECT_NAME = @PACKAGE_NAME@ PROJECT_NAME = @MODULE_NAME@
# The PROJECT_NUMBER tag can be used to enter a project or revision number. # The PROJECT_NUMBER tag can be used to enter a project or revision number.
# This could be handy for archiving the generated documentation or # This could be handy for archiving the generated documentation or
# if some version control system is used. # if some version control system is used.
PROJECT_NUMBER = @PACKAGE_VERSION@ PROJECT_NUMBER = @PROJECT_VERSION@
# The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute) # The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute)
# base path where the generated documentation will be put. # base path where the generated documentation will be put.
@ -272,22 +272,6 @@ SUBGROUPING = YES
TYPEDEF_HIDES_STRUCT = NO TYPEDEF_HIDES_STRUCT = NO
# The SYMBOL_CACHE_SIZE determines the size of the internal cache use to
# determine which symbols to keep in memory and which to flush to disk.
# When the cache is full, less often used symbols will be written to disk.
# For small to medium size projects (<1000 input files) the default value is
# probably good enough. For larger projects a too small cache size can cause
# doxygen to be busy swapping symbols to and from disk most of the time
# causing a significant performance penality.
# If the system has enough physical memory increasing the cache will improve the
# performance by keeping more symbols in memory. Note that the value works on
# a logarithmic scale so increasing the size by one will rougly double the
# memory usage. The cache size is given by this formula:
# 2^(16+SYMBOL_CACHE_SIZE). The valid range is 0..9, the default is 0,
# corresponding to a cache size of 2^16 = 65536 symbols
SYMBOL_CACHE_SIZE = 0
#--------------------------------------------------------------------------- #---------------------------------------------------------------------------
# Build related configuration options # Build related configuration options
#--------------------------------------------------------------------------- #---------------------------------------------------------------------------
@ -500,7 +484,7 @@ FILE_VERSION_FILTER =
# file name after the option, if omitted DoxygenLayout.xml will be used as the name # file name after the option, if omitted DoxygenLayout.xml will be used as the name
# of the layout file. # of the layout file.
LAYOUT_FILE = LAYOUT_FILE = @CMAKE_SOURCE_DIR@/DoxygenLayout.xml
#--------------------------------------------------------------------------- #---------------------------------------------------------------------------
# configuration options related to warning and progress messages # configuration options related to warning and progress messages
@ -594,7 +578,7 @@ RECURSIVE = YES
# excluded from the INPUT source files. This way you can easily exclude a # excluded from the INPUT source files. This way you can easily exclude a
# subdirectory from a directory tree whose root is specified with the INPUT tag. # subdirectory from a directory tree whose root is specified with the INPUT tag.
EXCLUDE = @CMAKE_SOURCE_DIR@/src/obsolete @CMAKE_SOURCE_DIR@/test @CMAKE_SOURCE_DIR@/tutorial @CMAKE_SOURCE_DIR@/contrib @CMAKE_SOURCE_DIR@/app EXCLUDE = @CMAKE_SOURCE_DIR@/deprecated @CMAKE_SOURCE_DIR@/eo/contrib @CMAKE_SOURCE_DIR@/eo/app @CMAKE_SOURCE_DIR@/eo/tutorial @CMAKE_SOURCE_DIR@/mo/tutorial @CMAKE_SOURCE_DIR@/moeo/tutorial @CMAKE_SOURCE_DIR@/smp/tutorial
# The EXCLUDE_SYMLINKS tag can be used select whether or not files or # The EXCLUDE_SYMLINKS tag can be used select whether or not files or
# directories that are symbolic links (a Unix filesystem feature) are excluded # directories that are symbolic links (a Unix filesystem feature) are excluded
@ -608,7 +592,7 @@ EXCLUDE_SYMLINKS = NO
# against the file with absolute path, so to exclude all test directories # against the file with absolute path, so to exclude all test directories
# for example use the pattern */test/* # for example use the pattern */test/*
EXCLUDE_PATTERNS = EXCLUDE_PATTERNS = *.sif/*
# The EXCLUDE_SYMBOLS tag can be used to specify one or more symbol names # The EXCLUDE_SYMBOLS tag can be used to specify one or more symbol names
# (namespaces, classes, functions, etc.) that should be excluded from the # (namespaces, classes, functions, etc.) that should be excluded from the
@ -622,7 +606,7 @@ EXCLUDE_SYMBOLS =
# directories that contain example code fragments that are included (see # directories that contain example code fragments that are included (see
# the \include command). # the \include command).
EXAMPLE_PATH = @CMAKE_SOURCE_DIR@/test EXAMPLE_PATH = @CMAKE_SOURCE_DIR@/eo/test @CMAKE_SOURCE_DIR@/edo/test @CMAKE_SOURCE_DIR@/mo/test @CMAKE_SOURCE_DIR@/moeo/test @CMAKE_SOURCE_DIR@/smp/test
# If the value of the EXAMPLE_PATH tag contains directories, you can use the # If the value of the EXAMPLE_PATH tag contains directories, you can use the
# EXAMPLE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp # EXAMPLE_PATTERNS tag to specify one or more wildcard pattern (like *.cpp
@ -784,14 +768,16 @@ HTML_HEADER =
HTML_FOOTER = HTML_FOOTER =
# The HTML_STYLESHEET tag can be used to specify a user-defined cascading # The HTML_EXTRA_STYLESHEET tag can be used to specify a user-defined cascading
# style sheet that is used by each HTML page. It can be used to # style sheet that is used by each HTML page. It can be used to
# fine-tune the look of the HTML output. If the tag is left blank doxygen # fine-tune the look of the HTML output. If the tag is left blank doxygen
# will generate a default style sheet. Note that doxygen will try to copy # will generate a default style sheet. Note that doxygen will try to copy
# the style sheet file to the HTML output directory, so don't put your own # the style sheet file to the HTML output directory, so don't put your own
# stylesheet in the HTML output directory as well, or it will be erased! # stylesheet in the HTML output directory as well, or it will be erased!
HTML_STYLESHEET = # HTML_EXTRA_STYLESHEET = @CMAKE_SOURCE_DIR@/doxygen-awesome-css/doxygen-awesome.css
# HTML_EXTRA_STYLESHEET = @CMAKE_SOURCE_DIR@/doxygen_theme_flat_design/src/doxygen-style.css
HTML_EXTRA_STYLESHEET = @CMAKE_SOURCE_DIR@/doxygen-style.css
# If the HTML_DYNAMIC_SECTIONS tag is set to YES then the generated HTML # If the HTML_DYNAMIC_SECTIONS tag is set to YES then the generated HTML
@ -800,7 +786,7 @@ HTML_STYLESHEET =
# JavaScript and DHTML is required (for instance Mozilla 1.0+, Firefox # JavaScript and DHTML is required (for instance Mozilla 1.0+, Firefox
# Netscape 6.0+, Internet explorer 5.0+, Konqueror, or Safari). # Netscape 6.0+, Internet explorer 5.0+, Konqueror, or Safari).
HTML_DYNAMIC_SECTIONS = NO HTML_DYNAMIC_SECTIONS = YES
# If the GENERATE_DOCSET tag is set to YES, additional index files # If the GENERATE_DOCSET tag is set to YES, additional index files
# will be generated that can be used as input for Apple's Xcode 3 # will be generated that can be used as input for Apple's Xcode 3
@ -970,7 +956,7 @@ SEARCHENGINE = YES
# If the GENERATE_LATEX tag is set to YES (the default) Doxygen will # If the GENERATE_LATEX tag is set to YES (the default) Doxygen will
# generate Latex output. # generate Latex output.
GENERATE_LATEX = YES GENERATE_LATEX = NO
# The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put. # The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put.
# If a relative path is entered the value of OUTPUT_DIRECTORY will be # If a relative path is entered the value of OUTPUT_DIRECTORY will be
@ -1129,18 +1115,6 @@ GENERATE_XML = NO
XML_OUTPUT = xml XML_OUTPUT = xml
# The XML_SCHEMA tag can be used to specify an XML schema,
# which can be used by a validating XML parser to check the
# syntax of the XML files.
XML_SCHEMA =
# The XML_DTD tag can be used to specify an XML DTD,
# which can be used by a validating XML parser to check the
# syntax of the XML files.
XML_DTD =
# If the XML_PROGRAMLISTING tag is set to YES Doxygen will # If the XML_PROGRAMLISTING tag is set to YES Doxygen will
# dump the program listings (including syntax highlighting # dump the program listings (including syntax highlighting
# and cross-referencing information) to the XML output. Note that # and cross-referencing information) to the XML output. Note that
@ -1301,11 +1275,6 @@ ALLEXTERNALS = NO
EXTERNAL_GROUPS = YES EXTERNAL_GROUPS = YES
# The PERL_PATH should be the absolute path and name of the perl script
# interpreter (i.e. the result of `which perl').
PERL_PATH = /usr/bin/perl
#--------------------------------------------------------------------------- #---------------------------------------------------------------------------
# Configuration options related to the dot tool # Configuration options related to the dot tool
#--------------------------------------------------------------------------- #---------------------------------------------------------------------------
@ -1319,15 +1288,6 @@ PERL_PATH = /usr/bin/perl
CLASS_DIAGRAMS = YES CLASS_DIAGRAMS = YES
# You can define message sequence charts within doxygen comments using the \msc
# command. Doxygen will then run the mscgen tool (see
# http://www.mcternan.me.uk/mscgen/) to produce the chart and insert it in the
# documentation. The MSCGEN_PATH tag allows you to specify the directory where
# the mscgen tool resides. If left empty the tool is assumed to be found in the
# default search path.
MSCGEN_PATH =
# If set to YES, the inheritance and collaboration graphs will hide # If set to YES, the inheritance and collaboration graphs will hide
# inheritance and usage relations if the target is undocumented # inheritance and usage relations if the target is undocumented
# or is not a class. # or is not a class.
@ -1350,7 +1310,7 @@ HAVE_DOT = YES
# DOTFONTPATH environment variable or by setting DOT_FONTPATH to the directory # DOTFONTPATH environment variable or by setting DOT_FONTPATH to the directory
# containing the font. # containing the font.
DOT_FONTNAME = FreeSans DOT_FONTNAME =
# The DOT_FONTSIZE tag can be used to set the size of the font of dot graphs. # The DOT_FONTSIZE tag can be used to set the size of the font of dot graphs.
# The default size is 10pt. # The default size is 10pt.
@ -1392,7 +1352,7 @@ UML_LOOK = NO
# If set to YES, the inheritance and collaboration graphs will show the # If set to YES, the inheritance and collaboration graphs will show the
# relations between templates and their instances. # relations between templates and their instances.
TEMPLATE_RELATIONS = NO TEMPLATE_RELATIONS = YES
# If the ENABLE_PREPROCESSING, SEARCH_INCLUDES, INCLUDE_GRAPH, and HAVE_DOT # If the ENABLE_PREPROCESSING, SEARCH_INCLUDES, INCLUDE_GRAPH, and HAVE_DOT
# tags are set to YES then doxygen will generate a graph for each documented # tags are set to YES then doxygen will generate a graph for each documented
@ -1440,7 +1400,18 @@ DIRECTORY_GRAPH = YES
# generated by dot. Possible values are png, jpg, or gif # generated by dot. Possible values are png, jpg, or gif
# If left blank png will be used. # If left blank png will be used.
DOT_IMAGE_FORMAT = png DOT_IMAGE_FORMAT = svg
# If DOT_IMAGE_FORMAT is set to svg, then this option can be set to YES
# to enable generation of interactive SVG images that allow zooming and panning.
# Note that this requires a modern browser other than Internet Explorer.
# Tested and working are Firefox, Chrome, Safari, and Opera.
# Note: For IE 9+ you need to set HTML_FILE_EXTENSION to xhtml
# in order to make the SVG files visible.
# Older versions of IE do not have SVG support.
# This tag requires that the tag HAVE_DOT is set to YES.
INTERACTIVE_SVG = YES
# The tag DOT_PATH can be used to specify the path where the dot tool can be # The tag DOT_PATH can be used to specify the path where the dot tool can be
# found. If left blank, it is assumed the dot tool can be found in the path. # found. If left blank, it is assumed the dot tool can be found in the path.
@ -1486,7 +1457,7 @@ DOT_TRANSPARENT = NO
# makes dot run faster, but since only newer versions of dot (>1.8.10) # makes dot run faster, but since only newer versions of dot (>1.8.10)
# support this, this feature is disabled by default. # support this, this feature is disabled by default.
DOT_MULTI_TARGETS = NO DOT_MULTI_TARGETS = YES
# If the GENERATE_LEGEND tag is set to YES (the default) Doxygen will # If the GENERATE_LEGEND tag is set to YES (the default) Doxygen will
# generate a legend page explaining the meaning of the various boxes and # generate a legend page explaining the meaning of the various boxes and

736
doxygen-style.css Normal file
View file

@ -0,0 +1,736 @@
/* This doxygen theme is free to use. If you like this, please Star https://github.com/kcwongjoe/doxygen_theme_flat_design */
/* Color Pattern. You can change this pattern to design your theme. */
:root {
/* Content */
--bgcolor: #ffffff;
--bgfont: #303030;
--bgfont2: #3771c8;
--bgfont-hover: #3771c8;
--bgfont-hover-text-decoration: none;
--bgborder: #7d7d7d;
--bgborder2: #f6f6f6;
/* Main Header */
--bg1color: #303030;
--bg1font: #ffffff;
--bg1font2: #3771c8;
/* Second header */
--bg2color: #E2E2E2;
--bg2font: #7D7D7D;
--bg2-hover-bg: #ffffff;
--bg2-hover-font: #303030;
--bg2-hover-topborder: #3771c8;
/* Third header */
--bg3color: #f6f6f6;
--bg3font: #303030;
--bg3font2: #7D7D7D;
/* Code */
--code-bg: #f6f6f6;
--code-comment: #7D7D7D;
--code-keyword: #d73a49;
--code-preprocessor: #d73a49;
--code-keywordtype: #d73a49;
--code-text: #303030;
--code-code: #6f42c1;
--code-line: #7D7D7D;
--code-line-bg: #D8D8D8;
/* Namespace List, Class List icon */
--icon-bg: #303030
--icon-font: #3771c8;
/* Class Index */
--qindex-menu-bg: #303030;
--qindex-menu-font: #ffffff;
--qindex-menu-font-hover: #3771c8;
--qindex-icon-bg: #3771c8;
--qindex-icon-font: #303030;
/* Member table */
--mem-title-bg: #3771c8;
--mem-title-font: #ffffff;
--mem-subtitle-bg: #77b1f8;
--mem-subtitle-font: #303030;
--mem-subtitle-font-hover: #303030;
--mem-content-bg: #ffffff;
--mem-content-font: #303030;
--mem-content-border: grey;
--mem-content-highlighted:#3771c8;
/* Nav Tree */
--nav-tree-bg: #E2E2E2;
--nav-tree-bg-hover: #ffffff;
--nav-tree-font: #7D7D7D;
--nav-tree-font-hover: #303030;
--nav-tree-bg-selected: #3771c8;
--nav-tree-font-selected: white;
}
body, table, div, p, dl {
color: var(--bgfont);
background-color: var(--bgcolor);
line-height: 150%;
font: 14px/22px, Roboto, Arial;
}
div.contents {
margin: 20px 40px;
}
div.contents ul {
line-height: 200%;
}
/***********************************/
/********** Project header *********/
/***********************************/
#titlearea {
border-bottom: none;
padding-bottom: 20px;
padding-top: 20px;
}
#titlearea, #titlearea * {
color: var(--bg1font);
background-color: var(--bg1color);
}
#projectname {
padding: 0px 40px !important;
}
#projectbrief {
padding: 0px 40px !important;
}
#projectalign {
padding: 0px !important;
}
/***********************************/
/************ Main Menu ************/
/***********************************/
/* Margin */
#main-menu {
padding: 0px 30px;
}
#main-menu a, #main-menu a:hover {
padding-top: 10px;
padding-bottom: 10px;
}
/* Menu button */
#main-menu li a {
background-image: none;
font-family: Arial;
text-shadow: none;
font-size: 14px;
font-weight: 700;
}
#main-menu, #main-menu>li>a {
background-image: none;
background-color: var(--bg2color);
color: var(--bg2font);
transition: 0.2s;
}
/* hover Effect */
#main-menu>li {
border-top: 5px solid var(--bg2color);
}
#main-menu>li:hover {
color: var(--bg2-hover-font);
background-color: var(--bg2-hover-bg);
border-top: 5px solid var(--bg2-hover-topborder);
font-width: bold;
}
#main-menu>li:hover, #main-menu>li>a:hover, #main-menu>li>a.highlighted {
color: var(--bg2-hover-font);
background-color: var(--bg2-hover-bg);
font-width: bold;
}
/* Search Bar */
#MSearchBox {
border-radius: 0;
box-shadow: none;
}
#MSearchBox>span {
margin: 10px;
}
#main-menu>li:last-child {
padding: 25px 0px;
}
/* Reset search hover color*/
#main-menu>li:last-child:hover {
color: var(--bg2font);
background-color: var(--bg2color);
border-top: 5px solid var(--bg2color);
}
#MSearchResultsWindow {
border: 1px solid var(--bg3font2);
background-color: var(--bg3color);
padding: 10px;
}
body.SRPage, body.SRPage * {
font-family: Arial;
}
/* Sub Menu */
#main-menu>li ul {
transition: max-height 0.2s ease-in-out;
padding: 0px;
border-radius: 0px !important;
}
#main-menu>li ul:before, #main-menu>li ul:after {
border-width: 0px;
}
#main-menu>li>ul li a, #main-menu>li>ul li {
background-color: var(--bgcolor);
color: var(--bgfont);
background-image: none;
}
#main-menu>li>ul li a:hover, #main-menu>li>ul li:hover {
background-color: var(--bgfont2);
/*color: var(--bgfont);*/
color: white;
font-width: bold;
}
/***********************************/
/************** Header *************/
/***********************************/
div.headertitle {
padding: 5px 40px;
}
div.header, div.header * {
color: var(--bg3font);
background-color: var(--bg3color);
border-bottom: none;
}
div.summary {
padding-right: 40px;
}
/***********************************/
/************** Link *************/
/***********************************/
a, a:visited, a:active, .contents a:visited, body.SRPage a, body.SRPage a:visited, body.SRPage a:active {
color: var(--bgfont);
text-decoration: none;
}
a:hover, .contents a:hover, body.SRPage a:hover {
color: var(--bgfont-hover);
text-decoration: var(--bgfont-hover-text-decoration);
}
/***********************************/
/************ Nav-path ************/
/***********************************/
#nav-path, #nav-path ul {
background-image: none;
}
#nav-path ul {
padding: 5px 30px;
}
#nav-path, #nav-path * {
color: var(--bg3font2);
background-color: var(--bg3color);
border: none;
font-family: Arial;
}
li.navelem {
background-image: url(data:image/svg+xml;base64,PHN2ZyB4bWxucz0iaHR0cDovL3d3dy53My5vcmcvMjAwMC9zdmciIHZlcnNpb249IjEuMSIgeG1sbnM6eGxpbms9Imh0dHA6Ly93d3cudzMub3JnLzE5OTkveGxpbmsiIHhtbG5zOnN2Z2pzPSJodHRwOi8vc3ZnanMuY29tL3N2Z2pzIiB3aWR0aD0iNTEyIiBoZWlnaHQ9IjUxMiIgeD0iMCIgeT0iMCIgdmlld0JveD0iMCAwIDI5Mi4zNTkgMjkyLjM1OSIgc3R5bGU9ImVuYWJsZS1iYWNrZ3JvdW5kOm5ldyAwIDAgNTEyIDUxMiIgeG1sOnNwYWNlPSJwcmVzZXJ2ZSIgY2xhc3M9IiI+PGc+CjxnIHhtbG5zPSJodHRwOi8vd3d3LnczLm9yZy8yMDAwL3N2ZyI+Cgk8cGF0aCBkPSJNMjIyLjk3OSwxMzMuMzMxTDk1LjA3Myw1LjQyNEM5MS40NTYsMS44MDcsODcuMTc4LDAsODIuMjI2LDBjLTQuOTUyLDAtOS4yMzMsMS44MDctMTIuODUsNS40MjQgICBjLTMuNjE3LDMuNjE3LTUuNDI0LDcuODk4LTUuNDI0LDEyLjg0N3YyNTUuODEzYzAsNC45NDgsMS44MDcsOS4yMzIsNS40MjQsMTIuODQ3YzMuNjIxLDMuNjE3LDcuOTAyLDUuNDI4LDEyLjg1LDUuNDI4ICAgYzQuOTQ5LDAsOS4yMy0xLjgxMSwxMi44NDctNS40MjhsMTI3LjkwNi0xMjcuOTA3YzMuNjE0LTMuNjEzLDUuNDI4LTcuODk3LDUuNDI4LTEyLjg0NyAgIEMyMjguNDA3LDE0MS4yMjksMjI2LjU5NCwxMzYuOTQ4LDIyMi45NzksMTMzLjMzMXoiIGZpbGw9IiM3ZDdkN2QiIGRhdGEtb3JpZ2luYWw9IiMwMDAwMDAiIHN0eWxlPSIiIGNsYXNzPSIiPjwvcGF0aD4KPC9nPgo8ZyB4bWxucz0iaHR0cDovL3d3dy53My5vcmcvMjAwMC9zdmciPgo8L2c+CjxnIHhtbG5zPSJodHRwOi8vd3d3LnczLm9yZy8yMDAwL3N2ZyI+CjwvZz4KPGcgeG1sbnM9Imh0dHA6Ly93d3cudzMub3JnLzIwMDAvc3ZnIj4KPC9nPgo8ZyB4bWxucz0iaHR0cDovL3d3dy53My5vcmcvMjAwMC9zdmciPgo8L2c+CjxnIHhtbG5zPSJodHRwOi8vd3d3LnczLm9yZy8yMDAwL3N2ZyI+CjwvZz4KPGcgeG1sbnM9Imh0dHA6Ly93d3cudzMub3JnLzIwMDAvc3ZnIj4KPC9nPgo8ZyB4bWxucz0iaHR0cDovL3d3dy53My5vcmcvMjAwMC9zdmciPgo8L2c+CjxnIHhtbG5zPSJodHRwOi8vd3d3LnczLm9yZy8yMDAwL3N2ZyI+CjwvZz4KPGcgeG1sbnM9Imh0dHA6Ly93d3cudzMub3JnLzIwMDAvc3ZnIj4KPC9nPgo8ZyB4bWxucz0iaHR0cDovL3d3dy53My5vcmcvMjAwMC9zdmciPgo8L2c+CjxnIHhtbG5zPSJodHRwOi8vd3d3LnczLm9yZy8yMDAwL3N2ZyI+CjwvZz4KPGcgeG1sbnM9Imh0dHA6Ly93d3cudzMub3JnLzIwMDAvc3ZnIj4KPC9nPgo8ZyB4bWxucz0iaHR0cDovL3d3dy53My5vcmcvMjAwMC9zdmciPgo8L2c+CjxnIHhtbG5zPSJodHRwOi8vd3d3LnczLm9yZy8yMDAwL3N2ZyI+CjwvZz4KPGcgeG1sbnM9Imh0dHA6Ly93d3cudzMub3JnLzIwMDAvc3ZnIj4KPC9nPgo8L2c+PC9zdmc+);
background-size: 9px;
}
li.navelem a {
margin-right: 20px;
}
/***********************************/
/*************** mem ***************/
/***********************************/
.memtitle {
padding: 15px;
margin-top: 30px;
border-top-left-radius: 0px;
border-top-right-radius: 0px;
}
.memtitle, .memtitle *, .memtitle a:visited {
border: none;
background-image: none;
color: var(--mem-title-font);
background-color: var(--mem-title-bg);
}
.memproto {
padding: 2em;
text-shadow: none;
border-top-right-radius: 0px;
-moz-border-radius-topright: 0px;
-webkit-border-top-right-radius: 0px;
}
.memproto, .memproto *, .memproto a:visited {
border: none;
background-image: none;
background-color: var(--mem-subtitle-bg);
color: var(--mem-subtitle-font);
font-size: inherit;
line-height: 100%
}
.memproto a:hover {
color: var(--mem-subtitle-font-hover);
}
.memdoc {
border-bottom: 1px solid var(--mem-content-border);
border-left: 1px solid var(--mem-content-border);
border-right: 1px solid var(--mem-content-border);
background-color: var(--mem-content-bg);
color: var(--mem-content-font);
border-bottom-left-radius: 0px;
border-bottom-right-radius: 0px;
-moz-border-radius-bottomleft: 0px;
-moz-border-radius-bottomright: 0px;
-webkit-border-bottom-left-radius: 0px;
-webkit-border-bottom-right-radius: 0px;
padding:1em;
}
.memdoc p, .memdoc dt {
padding: 0px 20px;
}
.memdoc > p {
font-size:1.2em;
}
.paramname {
color:black;
}
td.memItemRight > a:first-of-type {
font-size:1.3em;
}
/***********************************/
/************* Contents ************/
/***********************************/
a.anchor {
padding-top: 20px;
}
dl {
border-left: 5px solid;
padding:1em;
}
dt {
font-variant-caps: small-caps;
}
dl.warning {
border-top: thin solid red;
border-right: thin solid red;
border-bottom: thin solid red;
border-left-color: red;
background-color: #fee;
}
dl.warning > dt {
color: #500;
}
dl.note {
border-top:thin solid green;
border-right:thin solid green;
border-bottom:thin solid green;
border-left-color:green;
background-color: #efe;
}
dl.note > dt {
color: #050;
}
div.textblock {
padding:2em;
border: 2px solid var(--bgfont2);
box-shadow:0.5em 0.5em 0.5em var(--bgfont);
background-color: #fafaff;
}
div.textblock > p {
font-size:1.2em;
}
div.textblock > p.definition {
font-size:0.8em;
}
p.definition {
font-size: 0.8em;
}
p.reference {
font-size: 0.8em;
}
p {
background-color: transparent;
}
table {
margin-top:4em;
}
table.memname {
margin-top:0.1em;
}
table.mlabels {
margin-top:0.1em;
}
/***********************************/
/************* fragment ************/
/***********************************/
h2.groupheader {
color: #303030;
font-size: 200%;
font-weight: bold;
border-bottom: thin solid var(--bgfont2);
padding-bottom:1px;
margin-top:3em;
}
h3 {
background-color:var(--bgfont2);
color: var(--bgcolor);
font-size: 1.5em;
margin:0px;
padding:1em;
margin-bottom:2em;
border: 2px solid var(--bgfont2);
box-shadow:0.5em 0.5em 0.5em var(--bgfont);
}
div.fragment, pre.fragment {
border: none;
padding: 20px;
margin: none;
background-color: var(--code-bg);
}
div.line {
background-color: var(--code-bg);
}
span.comment {
color: var(--code-comment);
}
span.keyword {
color: var(--code-keyword);
}
span.preprocessor {
color: var(--code-preprocessor);
}
span.keywordtype {
color: var(--code-keywordtype);
}
span.mlabel {
background-color: var(--code-text);
color: var(--code-bg);
border-top: none;
border-left: none;
border-right: none;
border-bottom: none;
padding: 10px;
border-radius: 0px;
}
a.code {
color: var(--code-code);
}
span.lineno, span.lineno>* {
color: var(--code-line);
border-right: none;
background-color: var(--code-bg);
}
span.lineno a {
background-color: var(--code-line-bg);
}
span.lineno a:hover {
color: var(--bg3font);
background-color: var(--code-line-bg);
}
/***********************************/
/************* directory ***********/
/***********************************/
.directory tr.even {
background-color: inherit;
}
.iconfclosed {
background-image: url(closed-folder.png);
margin-right: 10px;
}
.iconfopen {
background-image: url(opened-folder.png);
margin-right: 10px;
}
.icondoc {
background-image: url(document.png);
margin-right: 10px;
}
.arrow {
color: #7d7d7d;
}
.icona {
vertical-align: middle;
margin-right: 5px;
}
.icon {
background-color: var(--icon-bg);
color: var(--icon-font);
display: table-cell;
vertical-align: middle;
height: 20px;
width: 20px;
}
div.ah {
background-color: var(--qindex-icon-bg);
color: var(--qindex-icon-font);
text-align: center;
background-image: none;
-webkit-box-shadow: none;
box-shadow: none;
-webkit-border-radius: 0px;
border-radius: 0px;
border: none;
}
div.qindex {
background-color: var(--qindex-menu-bg);
border: none;
padding: 20px;
}
a.qindex {
color: var(--qindex-menu-font);
font-weight: normal;
font-size: 20px;
}
a:hover.qindex {
color: var(--qindex-menu-font-hover);
}
a:visited.qindex {
color: var(--qindex-menu-font);
}
table.classindex {
margin-top: 30px;
margin-bottom: 30px;
}
table.classindex a.el {
font-weight: normal;
}
/***********************************/
/************** footer *************/
/***********************************/
div.directory {
border-top: 1px solid var(--bgborder);
border-bottom: none;
margin: 20px 0px;
}
div.directory a.el {
font-weight: normal;
}
div.directory>table {
margin: 20px 0px;
}
hr.footer {
border: none;
}
.contents>hr {
border-top: 0px;
}
/***********************************/
/*********** memberdecls ***********/
/***********************************/
.memItemLeft, .memItemRight {
padding: 15px 30px;
background-color: inherit;
}
.mdescRight {
padding: 0px 30px 10px 30px;
}
.memberdecls * {
background-color: inherit;
}
.memSeparator {
border-bottom: 1px solid var(--bgborder2);
}
.memTemplParams {
color: var(--bgfont);
}
/***********************************/
/*********** nav-tree ***********/
/***********************************/
#nav-tree-contents {
background-color: var(--nav-tree-bg);
margin: 0px;
}
#side-nav, #nav-tree {
background-image: none;
background-color: var(--nav-tree-bg);
}
#nav-tree .item {
background-color: var(--nav-tree-bg);
font-family: Arial;
text-shadow: none;
font-size: 14px;
font-weight: 700;
padding: 10px;
color: var(--nav-tree-font);
}
#nav-tree .arrow {
color: var(--nav-tree-font);
}
#nav-tree .selected {
background-image: none;
background-color: var(--nav-tree-bg-selected);
}
#nav-tree .selected a {
color: var(--nav-tree-font-selected);
}
#nav-tree .item:hover {
background-color: var(--nav-tree-bg-hover);
color: var(--nav-tree-font-hover);
}
#nav-tree .item a:hover {
color: var(--nav-tree-font-hover);
}
#side-nav .ui-resizable-e {
background-image: none;
background-color: var(--nav-tree-bg);
}
#nav-sync {
background-color: transparent;
}
#nav-sync>img {
content: url(off_sync.png);
}
#nav-sync.sync>img {
content: url(on_sync.png);
}
/***********************************/
/*********** Plant UML ***********/
/***********************************/
.plantumlgraph > img {
width: 80%;
}

3
edo/doc/CMakeLists.txt
View file

@ -22,7 +22,8 @@ if(DOXYGEN_FOUND)
) )
endif(UNIX AND NOT ${CMAKE_VERBOSE_MAKEFILE}) endif(UNIX AND NOT ${CMAKE_VERBOSE_MAKEFILE})
endif(DOXYGEN_EXECUTABLE) endif(DOXYGEN_EXECUTABLE)
configure_file("${CMAKE_CURRENT_SOURCE_DIR}/${EDO_DOC_CONFIG_FILE}.cmake" # configure_file("${CMAKE_CURRENT_SOURCE_DIR}/${EDO_DOC_CONFIG_FILE}.cmake"
configure_file("${CMAKE_SOURCE_DIR}/doxyfile.cmake"
"${EDO_DOC_DIR}/${EDO_DOC_CONFIG_FILE}") "${EDO_DOC_DIR}/${EDO_DOC_CONFIG_FILE}")
install( install(
DIRECTORY ${CMAKE_CURRENT_BINARY_DIR} DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}

6
edo/doc/edo.doxyfile.cmake
View file

@ -25,13 +25,13 @@ DOXYFILE_ENCODING = UTF-8
# The PROJECT_NAME tag is a single word (or a sequence of words surrounded # The PROJECT_NAME tag is a single word (or a sequence of words surrounded
# by quotes) that should identify the project. # by quotes) that should identify the project.
PROJECT_NAME = @PACKAGE_NAME@ PROJECT_NAME = @EDO_MODULE_NAME@
# The PROJECT_NUMBER tag can be used to enter a project or revision number. # The PROJECT_NUMBER tag can be used to enter a project or revision number.
# This could be handy for archiving the generated documentation or # This could be handy for archiving the generated documentation or
# if some version control system is used. # if some version control system is used.
PROJECT_NUMBER = @PACKAGE_VERSION@ PROJECT_NUMBER = @PROJECT_VERSION@
# The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute) # The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute)
# base path where the generated documentation will be put. # base path where the generated documentation will be put.
@ -1030,7 +1030,7 @@ SERVER_BASED_SEARCH = NO
# If the GENERATE_LATEX tag is set to YES (the default) Doxygen will # If the GENERATE_LATEX tag is set to YES (the default) Doxygen will
# generate Latex output. # generate Latex output.
GENERATE_LATEX = YES GENERATE_LATEX = NO
# The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put. # The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put.
# If a relative path is entered the value of OUTPUT_DIRECTORY will be # If a relative path is entered the value of OUTPUT_DIRECTORY will be

3
eo/doc/CMakeLists.txt
View file

@ -32,8 +32,9 @@ IF (DOXYGEN_FOUND)
ENDIF (DOXYGEN_EXECUTABLE) ENDIF (DOXYGEN_EXECUTABLE)
# configure cfg file # configure cfg file
# "${CMAKE_CURRENT_SOURCE_DIR}/${EO_DOC_CONFIG_FILE}.cmake"
CONFIGURE_FILE( CONFIGURE_FILE(
"${CMAKE_CURRENT_SOURCE_DIR}/${EO_DOC_CONFIG_FILE}.cmake" "${CMAKE_SOURCE_DIR}/doxyfile.cmake"
"${CMAKE_CURRENT_BINARY_DIR}/${EO_DOC_CONFIG_FILE}" "${CMAKE_CURRENT_BINARY_DIR}/${EO_DOC_CONFIG_FILE}"
) )

19
eo/src/eoAlgoFoundry.h
View file

@ -99,7 +99,7 @@ class eoParameterFoundry : public eoForgeScalar< Itf >
public: public:
/** Underlying type of the parameter. /** Underlying type of the parameter.
* *
* @note: You probably only want to use either `double` or `size_t`. * @note You probably only want to use either `double` or `size_t`.
* @see eoAlgoFoundry * @see eoAlgoFoundry
*/ */
using Type = Itf; using Type = Itf;
@ -154,24 +154,25 @@ class eoParameterFoundry : public eoForgeScalar< Itf >
* Now, you must implement the foundry just like any eoAlgo, by using the eoPop interface: * Now, you must implement the foundry just like any eoAlgo, by using the eoPop interface:
* @code * @code
* foundry(pop); * foundry(pop);
* @encode * @endcode
*
* It will instantiate the needed operators (only) and the algorithm itself on-the-fly, * It will instantiate the needed operators (only) and the algorithm itself on-the-fly,
* and then run it. * and then run it.
* *
* @note: The "encoding" which represent the selected options, figuring the actual meta-algorithm, * @note The "encoding" which represent the selected options, figuring the actual meta-algorithm,
* is a vector of `std::variant`, which can hold either a `size_t` or a `double`. * is a vector of `std::variant`, which can hold either a `size_t` or a `double`.
* The first one is used to indicate the index of an operator class * The first one is used to indicate the index of an operator class
* *or* a parameter which is a size. * *or* a parameter which is a size.
* The second is used to store numerical parameters values. * The second is used to store numerical parameters values.
* *
* @note: Thanks to the underlying eoOperatorFoundry, not all the added operators are instantiated. * @note Thanks to the underlying eoOperatorFoundry, not all the added operators are instantiated.
* Every instantiation is deferred upon actual use. That way, you can still reconfigure them * Every instantiation is deferred upon actual use. That way, you can still reconfigure them
* at any time with `eoForgeOperator::setup`, for example: * at any time with `eoForgeOperator::setup`, for example:
* @code * @code
* foundry.selector.at(0).setup(0.5); // using constructor's arguments * foundry.selector.at(0).setup(0.5); // using constructor's arguments
* @endcode * @endcode
* *
* @warning If the managed constructor takes a reference YOU SHOULD ABSOLUTELY wrap it * @warning If the managed constructor takes a reference *YOU SHOULD ABSOLUTELY* wrap it
* in a `std::ref` when using `add` or `setup`, or it will silently be passed as a copy, * in a `std::ref` when using `add` or `setup`, or it will silently be passed as a copy,
* which would effectively disable any link between operators. * which would effectively disable any link between operators.
* *
@ -215,7 +216,7 @@ class eoAlgoFoundry : public eoAlgo<EOT>
* *
* i.e. Select an algorithm to instantiate. * i.e. Select an algorithm to instantiate.
* *
* @note: You need to indicate the type of each item * @note You need to indicate the type of each item
* if you want to call this with a brace-initialized vector. * if you want to call this with a brace-initialized vector.
* *
* For example: * For example:
@ -230,7 +231,7 @@ class eoAlgoFoundry : public eoAlgo<EOT>
* eoAlgoFoundry<EOT>::Encodings encoded_algo(foundry.size()); * eoAlgoFoundry<EOT>::Encodings encoded_algo(foundry.size());
* encoded_algo[foundry.crossover_rates.index()] = crossover_rate; * encoded_algo[foundry.crossover_rates.index()] = crossover_rate;
* encoded_algo[foundry.crossover_opers.index()] = crossover_oper; * encoded_algo[foundry.crossover_opers.index()] = crossover_oper;
* @encdoe * @endcode
*/ */
void select( Encodings encodings ) void select( Encodings encodings )
{ {
@ -240,7 +241,7 @@ class eoAlgoFoundry : public eoAlgo<EOT>
/** Access to the encoding of the currently selected operator. /** Access to the encoding of the currently selected operator.
* *
* @warning: This returns a `std::variant`, which you should `std::get<T>`. * @warning This returns a `std::variant`, which you should `std::get<T>`.
* *
* For example: * For example:
* @code * @code
@ -248,7 +249,7 @@ class eoAlgoFoundry : public eoAlgo<EOT>
* double param_id = std::get<double>(foundry.at(3)); * double param_id = std::get<double>(foundry.at(3));
* @endcode * @endcode
* *
* @note: You can use rank, value or len to have automatic casting. * @see rank, @see value or @see len to have automatic casting.
*/ */
Encoding & at(size_t i) Encoding & at(size_t i)
{ {

8
eo/src/eoAlgoFoundryEA.h
View file

@ -55,7 +55,7 @@
* // + continue * // + continue
* @endcode * @endcode
* *
* @note: by default, the firsts of the five operators are selected. * @note by default, the firsts of the five operators are select ed.
* *
* If you don't (want to) recall the order of the operators in the encoding, * If you don't (want to) recall the order of the operators in the encoding,
* you can use the `index()` member, for example: * you can use the `index()` member, for example:
@ -66,11 +66,11 @@
* Now, you can call the fourdry just like any eoAlgo, by passing it an eoPop: * Now, you can call the fourdry just like any eoAlgo, by passing it an eoPop:
* @code * @code
* foundry(pop); * foundry(pop);
* @encode * @endcode
* It will instantiate the needed operators (only) and the algorithm itself on-the-fly, * It will instantiate the needed operators (only) and the algorithm itself on-the-fly,
* and then run it. * and then run it.
* *
* @note: Thanks to the underlying eoOperatorFoundry, not all the added operators are instantiated. * @note Thanks to the underlying eoOperatorFoundry, not all the added operators are instantiated.
* Every instantiation is deferred upon actual use. That way, you can still reconfigure them * Every instantiation is deferred upon actual use. That way, you can still reconfigure them
* at any time with `eoForgeOperator::setup`, for example: * at any time with `eoForgeOperator::setup`, for example:
* @code * @code
@ -135,7 +135,7 @@ class eoAlgoFoundryEA : public eoAlgoFoundry<EOT>
/** Return an approximate name of the seected algorithm. /** Return an approximate name of the seected algorithm.
* *
* @note: does not take into account parameters of the operators, * @note does not take into account parameters of the operators,
* only show class names. * only show class names.
*/ */
std::string name() std::string name()

7
eo/src/eoAlgoFoundryFastGA.h
View file

@ -62,7 +62,7 @@
* }); * });
* @endcode * @endcode
* *
* @note: by default, the firsts of the 10 operators are selected. * @note by default, the firsts of the 10 operators are selected.
* *
* If you don't (want to) recall the order of the operators in the encoding, * If you don't (want to) recall the order of the operators in the encoding,
* you can use the `index()` member, for example: * you can use the `index()` member, for example:
@ -73,11 +73,12 @@
* Now, you can call the foundry just like any eoAlgo, by passing it an eoPop: * Now, you can call the foundry just like any eoAlgo, by passing it an eoPop:
* @code * @code
* foundry(pop); * foundry(pop);
* @encode * @endcode
*
* It will instantiate the needed operators (only) and the algorithm itself on-the-fly, * It will instantiate the needed operators (only) and the algorithm itself on-the-fly,
* and then run it. * and then run it.
* *
* @note: Thanks to the underlying eoOperatorFoundry, not all the added operators are instantiated. * @note Thanks to the underlying eoOperatorFoundry, not all the added operators are instantiated.
* Every instantiation is deferred upon actual use. That way, you can still reconfigure them * Every instantiation is deferred upon actual use. That way, you can still reconfigure them
* at any time with `eoForgeOperator::setup`, for example: * at any time with `eoForgeOperator::setup`, for example:
* @code * @code

3
mo/doc/CMakeLists.txt
View file

@ -19,7 +19,8 @@ if(DOXYGEN_FOUND)
WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}) WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR})
endif(UNIX AND NOT ${CMAKE_VERBOSE_MAKEFILE}) endif(UNIX AND NOT ${CMAKE_VERBOSE_MAKEFILE})
endif(DOXYGEN_EXECUTABLE) endif(DOXYGEN_EXECUTABLE)
configure_file("${CMAKE_CURRENT_SOURCE_DIR}/${MO_DOC_CONFIG_FILE}.cmake" # configure_file("${CMAKE_CURRENT_SOURCE_DIR}/${MO_DOC_CONFIG_FILE}.cmake"
configure_file("${CMAKE_SOURCE_DIR}/doxyfile.cmake"
"${MO_DOC_DIR}/${MO_DOC_CONFIG_FILE}") "${MO_DOC_DIR}/${MO_DOC_CONFIG_FILE}")
install( install(
DIRECTORY ${CMAKE_CURRENT_BINARY_DIR} DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}

4
mo/doc/mo.doxyfile.cmake
View file

@ -31,7 +31,7 @@ PROJECT_NAME = @MO_MODULE_NAME@
# This could be handy for archiving the generated documentation or # This could be handy for archiving the generated documentation or
# if some version control system is used. # if some version control system is used.
PROJECT_NUMBER = @PACKAGE_VERSION@ PROJECT_NUMBER = @PROJECT_VERSION@
# The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute) # The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute)
# base path where the generated documentation will be put. # base path where the generated documentation will be put.
@ -987,7 +987,7 @@ FORMULA_FONTSIZE = 10
# If the GENERATE_LATEX tag is set to YES (the default) Doxygen will # If the GENERATE_LATEX tag is set to YES (the default) Doxygen will
# generate Latex output. # generate Latex output.
GENERATE_LATEX = YES GENERATE_LATEX = NO
# The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put. # The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put.
# If a relative path is entered the value of OUTPUT_DIRECTORY will be # If a relative path is entered the value of OUTPUT_DIRECTORY will be

3
moeo/doc/CMakeLists.txt
View file

@ -22,7 +22,8 @@ if(DOXYGEN_FOUND)
) )
endif(UNIX AND NOT ${CMAKE_VERBOSE_MAKEFILE}) endif(UNIX AND NOT ${CMAKE_VERBOSE_MAKEFILE})
endif(DOXYGEN_EXECUTABLE) endif(DOXYGEN_EXECUTABLE)
configure_file("${CMAKE_CURRENT_SOURCE_DIR}/${MOEO_DOC_CONFIG_FILE}.cmake" # configure_file("${CMAKE_CURRENT_SOURCE_DIR}/${MOEO_DOC_CONFIG_FILE}.cmake"
configure_file("${CMAKE_SOURCE_DIR}/doxyfile.cmake"
"${MOEO_DOC_DIR}/${MOEO_DOC_CONFIG_FILE}") "${MOEO_DOC_DIR}/${MOEO_DOC_CONFIG_FILE}")
install( install(
DIRECTORY ${CMAKE_CURRENT_BINARY_DIR} DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}

4
moeo/doc/moeo.doxyfile.cmake
View file

@ -31,7 +31,7 @@ PROJECT_NAME = @MOEO_MODULE_NAME@
# This could be handy for archiving the generated documentation or # This could be handy for archiving the generated documentation or
# if some version control system is used. # if some version control system is used.
PROJECT_NUMBER = @PACKAGE_VERSION@ PROJECT_NUMBER = @PROJECT_VERSION@
# The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute) # The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute)
# base path where the generated documentation will be put. # base path where the generated documentation will be put.
@ -987,7 +987,7 @@ FORMULA_FONTSIZE = 10
# If the GENERATE_LATEX tag is set to YES (the default) Doxygen will # If the GENERATE_LATEX tag is set to YES (the default) Doxygen will
# generate Latex output. # generate Latex output.
GENERATE_LATEX = YES GENERATE_LATEX = NO
# The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put. # The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put.
# If a relative path is entered the value of OUTPUT_DIRECTORY will be # If a relative path is entered the value of OUTPUT_DIRECTORY will be

2
problems/DTLZ/doc/moeo.doxyfile.cmake
View file

@ -137,7 +137,7 @@ TREEVIEW_WIDTH = 250
#--------------------------------------------------------------------------- #---------------------------------------------------------------------------
# configuration options related to the LaTeX output # configuration options related to the LaTeX output
#--------------------------------------------------------------------------- #---------------------------------------------------------------------------
GENERATE_LATEX = YES GENERATE_LATEX = NO
LATEX_OUTPUT = latex LATEX_OUTPUT = latex
LATEX_CMD_NAME = latex LATEX_CMD_NAME = latex
MAKEINDEX_CMD_NAME = makeindex MAKEINDEX_CMD_NAME = makeindex

3
smp/doc/CMakeLists.txt
View file

@ -19,7 +19,8 @@ if(DOXYGEN_FOUND)
WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}) WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR})
endif(UNIX AND NOT ${CMAKE_VERBOSE_MAKEFILE}) endif(UNIX AND NOT ${CMAKE_VERBOSE_MAKEFILE})
endif(DOXYGEN_EXECUTABLE) endif(DOXYGEN_EXECUTABLE)
configure_file("${CMAKE_CURRENT_SOURCE_DIR}/${SMP_DOC_CONFIG_FILE}.cmake" # configure_file("${CMAKE_CURRENT_SOURCE_DIR}/${SMP_DOC_CONFIG_FILE}.cmake"
configure_file("${CMAKE_SOURCE_DIR}/doxyfile.cmake"
"${SMP_DOC_DIR}/${SMP_DOC_CONFIG_FILE}") "${SMP_DOC_DIR}/${SMP_DOC_CONFIG_FILE}")
install( install(
DIRECTORY ${CMAKE_CURRENT_BINARY_DIR} DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}

4
smp/doc/smp.doxyfile.cmake
View file

@ -31,7 +31,7 @@ PROJECT_NAME = @SMP_MODULE_NAME@
# This could be handy for archiving the generated documentation or # This could be handy for archiving the generated documentation or
# if some version control system is used. # if some version control system is used.
PROJECT_NUMBER = @PACKAGE_VERSION@ PROJECT_NUMBER = @PROJECT_VERSION@
# The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute) # The OUTPUT_DIRECTORY tag is used to specify the (relative or absolute)
# base path where the generated documentation will be put. # base path where the generated documentation will be put.
@ -988,7 +988,7 @@ FORMULA_FONTSIZE = 10
# If the GENERATE_LATEX tag is set to YES (the default) Doxygen will # If the GENERATE_LATEX tag is set to YES (the default) Doxygen will
# generate Latex output. # generate Latex output.
GENERATE_LATEX = YES GENERATE_LATEX = NO
# The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put. # The LATEX_OUTPUT tag is used to specify where the LaTeX docs will be put.
# If a relative path is entered the value of OUTPUT_DIRECTORY will be # If a relative path is entered the value of OUTPUT_DIRECTORY will be