GPU -> GPU-good
git-svn-id: svn://scm.gforge.inria.fr/svnroot/paradiseo@2177 331e1502-861f-0410-8da2-ba01fb791d7f
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107
ParadisEO-GPU-good/src/cudaType/moCudaBitVector.h
Normal file
107
ParadisEO-GPU-good/src/cudaType/moCudaBitVector.h
Normal file
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@ -0,0 +1,107 @@
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/*
|
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<moCudaBitVector.h>
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Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Karima Boufaras, Thé Van LUONG
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef _moCudaBitVector_H_
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#define _moCudaBitVector_H_
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#include <cudaType/moCudaVector.h>
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/**
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* Implementation of Bit vector representation on CUDA.
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*/
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template<class Fitness>
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class moCudaBitVector: public moCudaVector<bool, Fitness> {
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public:
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using moCudaVector<bool, Fitness>::vect;
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using moCudaVector<bool, Fitness>::N;
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/**
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* Default constructor.
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*/
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moCudaBitVector() :
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moCudaVector<bool, Fitness> () {
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}
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/**
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*Constructor.
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*@param _size The neighborhood size.
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*/
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moCudaBitVector(unsigned _size) {
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N = _size;
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vect = new bool[_size];
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create();
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}
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/**
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*Constructor.
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*@param _size The neighborhood size.
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*@param _b Value to assign to vector.
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*/
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moCudaBitVector(unsigned _size, bool _b) {
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N = _size;
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vect = new bool[_size];
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for (unsigned i = 0; i < _size; i++)
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vect[i] = _b;
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}
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/**
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*Initializer of random bit vector.
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*/
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void create() {
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for (unsigned i = 0; i < N; i++) {
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vect[i] = (bool) round((float) rng.rand() / RAND_MAX);
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}
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}
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||||
};
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#endif
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113
ParadisEO-GPU-good/src/cudaType/moCudaIntVector.h
Normal file
113
ParadisEO-GPU-good/src/cudaType/moCudaIntVector.h
Normal file
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@ -0,0 +1,113 @@
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/*
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||||
<moCudaIntVector.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Karima Boufaras, Thé Van LUONG
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef _moCudaIntVector_H_
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#define _moCudaIntVector_H_
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#include <cudaType/moCudaVector.h>
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/**
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* Implementation of integer vector representation on CUDA.
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*/
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template<class Fitness>
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class moCudaIntVector: public moCudaVector<int, Fitness> {
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public:
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using moCudaVector<int, Fitness>::vect;
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using moCudaVector<int, Fitness>::N;
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/**
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* Default constructor.
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*/
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moCudaIntVector() :
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moCudaVector<int, Fitness> () {
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}
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/**
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*Constructor.
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*@param _size The neighborhood size.
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||||
*/
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moCudaIntVector(unsigned _size) {
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N = _size;
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vect = new int[_size];
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||||
create();
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||||
}
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/**
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||||
*Assignment operator
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*@param _vector The vector passed to the function determine the new content.
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*@return a new vector.
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||||
*/
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||||
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moCudaIntVector& operator=(const moCudaIntVector & _vector) {
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N = _vector.N;
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vect = new int[N];
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for (unsigned i = 0; i < N; i++)
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vect[i] = _vector.vect[i];
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fitness(_vector.fitness());
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return (*this);
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}
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/**
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*Initializer of random integer vector.
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||||
*/
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||||
void create() {
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unsigned random;
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int temp;
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for (unsigned i = 0; i < N; i++)
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vect[i] = i;
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// we want a random permutation so we shuffle
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for (unsigned i = 0; i < N; i++) {
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random = rng.rand() % (N - i) + i;
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temp = vect[i];
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vect[i] = vect[random];
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vect[random] = temp;
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}
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}
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};
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#endif
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159
ParadisEO-GPU-good/src/cudaType/moCudaVector.h
Normal file
159
ParadisEO-GPU-good/src/cudaType/moCudaVector.h
Normal file
|
|
@ -0,0 +1,159 @@
|
|||
/*
|
||||
<moCudaVector.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Thé Van LUONG, Karima Boufaras
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef _moCudaVector_H_
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#define _moCudaVector_H_
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#include <eo>
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/**
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* Implementation of vector representation on CUDA.
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||||
*/
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||||
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template<class ElemT, class Fitness>
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class moCudaVector: public EO<Fitness> {
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public:
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typedef ElemT ElemType;
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ElemType * vect;
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unsigned N;
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/**
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* Default constructor.
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||||
*/
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moCudaVector() :
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N(0) {
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}
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||||
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/**
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*Constructor.
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*@param _size The neighborhood size.
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||||
*/
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moCudaVector(unsigned _size) {
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N = _size;
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vect = new ElemType[_size];
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create();
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}
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/**
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* Destructor.
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||||
*/
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||||
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~moCudaVector() {
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if (N > 1)
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delete[] vect;
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}
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/**
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*How to fill the vector.
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*/
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||||
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virtual void create() {
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}
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/**
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*Assignment operator
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*@param _vector The vector passed to the function determine the new content.
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||||
*@return a new vector.
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||||
*/
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||||
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virtual moCudaVector& operator=(const moCudaVector & _vector) {
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N = _vector.N;
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vect = new ElemType[N];
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for (unsigned i = 0; i < N; i++)
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vect[i] = _vector.vect[i];
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fitness(_vector.fitness());
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return (*this);
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}
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||||
/**
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*An accessor read only on the i'th element of the vector (function inline can be called from host or device).
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*@param
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*_i The i'th element of vector.
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*@return
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*The i'th element of the vector for read only
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*/
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||||
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inline __host__ __device__ const ElemType & operator[](unsigned _i) const {
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||||
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return vect[_i];
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|
||||
}
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||||
|
||||
/**
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||||
*An accessor read-write on the i'th element of the vector(function inline can be called from host or device).
|
||||
*@param _i The i'th element of the vector.
|
||||
*@return The i'th element of the vector for read-write
|
||||
*/
|
||||
|
||||
inline __host__ __device__ ElemType & operator[](unsigned _i) {
|
||||
|
||||
return vect[_i];
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
*Function inline to get the size of vector, called from host and device.
|
||||
*@return The vector size's
|
||||
*/
|
||||
|
||||
inline __host__ __device__ unsigned size() {
|
||||
|
||||
return N;
|
||||
|
||||
}
|
||||
|
||||
virtual void printOn(std::ostream& os) const {
|
||||
EO<Fitness>::printOn(os);
|
||||
os << ' ';
|
||||
os << N << ' ';
|
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unsigned int i;
|
||||
for (i = 0; i < N; i++)
|
||||
os << vect[i] << ' ';
|
||||
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif
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136
ParadisEO-GPU-good/src/eval/moCudaEval.h
Normal file
136
ParadisEO-GPU-good/src/eval/moCudaEval.h
Normal file
|
|
@ -0,0 +1,136 @@
|
|||
/*
|
||||
<moCudaEval.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Karima Boufaras, Thé Van LUONG
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef moCudaEval_H
|
||||
#define moCudaEval_H
|
||||
#include <eval/moEval.h>
|
||||
|
||||
/**
|
||||
* Abstract class for evaluation on GPU
|
||||
*/
|
||||
template<class Neighbor>
|
||||
class moCudaEval: public moEval<Neighbor> {
|
||||
|
||||
public:
|
||||
|
||||
/**
|
||||
* Define type of a solution corresponding to Neighbor
|
||||
*/
|
||||
typedef typename Neighbor::EOT EOT;
|
||||
|
||||
typedef typename EOT::Fitness Fitness;
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
* @param _neighborhoodSize the size of the neighborhood
|
||||
*/
|
||||
|
||||
moCudaEval(unsigned int _neighborhoodSize) {
|
||||
|
||||
neighborhoodSize = _neighborhoodSize;
|
||||
host_FitnessArray = new Fitness[neighborhoodSize];
|
||||
cudaMalloc((void**) &device_FitnessArray, neighborhoodSize
|
||||
* sizeof(Fitness));
|
||||
kernel_Dim = neighborhoodSize / BLOCK_SIZE + ((neighborhoodSize
|
||||
% BLOCK_SIZE == 0) ? 0 : 1);
|
||||
}
|
||||
|
||||
/**
|
||||
* Destructor
|
||||
*/
|
||||
|
||||
~moCudaEval() {
|
||||
|
||||
delete[] host_FitnessArray;
|
||||
cudaFree(device_FitnessArray);
|
||||
cudaFree(&device_solution);
|
||||
}
|
||||
|
||||
/**
|
||||
* Set fitness of a solution neighbors
|
||||
*@param _sol the solution which generate the neighborhood
|
||||
*@param _neighbor the current neighbor
|
||||
*/
|
||||
|
||||
void operator()(EOT & _sol, Neighbor & _neighbor) {
|
||||
|
||||
_neighbor.fitness(host_FitnessArray[_neighbor.index()]);
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
* Compute fitness for all Kswap solution neighbors in device
|
||||
* @param _sol the solution which generate the neighborhood
|
||||
* @param _mapping the neighborhood mapping
|
||||
* @param _Kswap the number of swap
|
||||
*/
|
||||
virtual void neighborhoodKswapEval(EOT & _sol, unsigned * _mapping,
|
||||
unsigned _Kswap) {
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
* Compute fitness for all Kflip solution neighbors in device
|
||||
* @param _sol the solution which generate the neighborhood
|
||||
* @param _mapping the neighborhood mapping
|
||||
* @param _Kflip the number of bit to flip
|
||||
*/
|
||||
virtual void neighborhoodKflipEval(EOT & _sol, unsigned * _mapping,
|
||||
unsigned _Kflip) {
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
* Compute fitness for all solution neighbors in device
|
||||
* @param _sol the solution which generate the neighborhood
|
||||
*/
|
||||
|
||||
virtual void neighborhoodEval(EOT & _sol)=0;
|
||||
|
||||
protected:
|
||||
|
||||
//the host array to save all neighbors fitness
|
||||
Fitness * host_FitnessArray;
|
||||
//the device array to save neighbors fitness computed in device
|
||||
Fitness * device_FitnessArray;
|
||||
//the device solution
|
||||
EOT device_solution;
|
||||
//the size of neighborhood
|
||||
unsigned int neighborhoodSize;
|
||||
//Cuda kernel dimension
|
||||
int kernel_Dim;
|
||||
|
||||
};
|
||||
|
||||
#endif
|
||||
84
ParadisEO-GPU-good/src/eval/moCudaEvalFunc.h
Normal file
84
ParadisEO-GPU-good/src/eval/moCudaEvalFunc.h
Normal file
|
|
@ -0,0 +1,84 @@
|
|||
/*
|
||||
<moCudaEvalFunc.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Thé Van LUONG, Karima Boufaras
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef __moCudaEvalFunc_H
|
||||
#define __moCudaEvalFunc_H
|
||||
|
||||
/**
|
||||
* Abstract class for CUDA evaluation of neighbor
|
||||
*/
|
||||
|
||||
template<class Neighbor>
|
||||
class moCudaEvalFunc {
|
||||
|
||||
public:
|
||||
|
||||
/**
|
||||
* Define type of a solution corresponding to Neighbor
|
||||
*/
|
||||
|
||||
typedef typename Neighbor::EOT EOT;
|
||||
typedef typename EOT::ElemType T;
|
||||
typedef typename EOT::Fitness Fitness;
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
*/
|
||||
|
||||
moCudaEvalFunc() {
|
||||
}
|
||||
|
||||
/**
|
||||
* Destructor
|
||||
*/
|
||||
|
||||
~moCudaEvalFunc() {
|
||||
}
|
||||
|
||||
/**
|
||||
*Virtual functor to compute fitness of a solution neighbor
|
||||
*@param _solution the solution which generate the neighborhood
|
||||
*@param _fitness the current solution fitness
|
||||
*@param _index the index neighbor
|
||||
*/
|
||||
|
||||
virtual inline __host__ __device__ Fitness operator() (EOT & _solution,Fitness _fitness, unsigned int * _index){
|
||||
|
||||
return _fitness;
|
||||
|
||||
};
|
||||
|
||||
|
||||
};
|
||||
#endif
|
||||
212
ParadisEO-GPU-good/src/eval/moCudaKswapEval.h
Normal file
212
ParadisEO-GPU-good/src/eval/moCudaKswapEval.h
Normal file
|
|
@ -0,0 +1,212 @@
|
|||
/*
|
||||
<moCudaKswapEval.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Karima Boufaras, Thé Van LUONG
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef moCudaKswapEval_H
|
||||
#define moCudaKswapEval_H
|
||||
#include <eval/moCudaEval.h>
|
||||
#include <eval/moCudakernelEval.h>
|
||||
|
||||
/**
|
||||
* class for the K-swap neighborhood evaluation
|
||||
*/
|
||||
|
||||
template<class Neighbor, class IncrementEval>
|
||||
class moCudaKswapEval: public moCudaEval<Neighbor> {
|
||||
|
||||
public:
|
||||
|
||||
/**
|
||||
* Define type of a solution corresponding to Neighbor
|
||||
*/
|
||||
typedef typename Neighbor::EOT EOT;
|
||||
/**
|
||||
* Define type of a vector corresponding to Solution
|
||||
*/
|
||||
typedef typename EOT::ElemType T;
|
||||
/**
|
||||
* Define type of a fitness corresponding to Solution
|
||||
*/
|
||||
typedef typename EOT::Fitness Fitness;
|
||||
|
||||
using moCudaEval<Neighbor>::neighborhoodSize;
|
||||
using moCudaEval<Neighbor>::host_FitnessArray;
|
||||
using moCudaEval<Neighbor>::device_FitnessArray;
|
||||
using moCudaEval<Neighbor>::device_solution;
|
||||
using moCudaEval<Neighbor>::kernel_Dim;
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
* @param _neighborhoodSize the size of the neighborhood
|
||||
* @param _incrEval the incremental evaluation
|
||||
*/
|
||||
|
||||
moCudaKswapEval(unsigned int _neighborhoodSize, IncrementEval & _incrEval) :
|
||||
moCudaEval<Neighbor> (_neighborhoodSize), incrEval(_incrEval) {
|
||||
mutex = false;
|
||||
mutex_kswap = false;
|
||||
}
|
||||
|
||||
/**
|
||||
* Destructor
|
||||
*/
|
||||
~moCudaKswapEval() {
|
||||
if (mutex_kswap) {
|
||||
cudaFree(&device_setSolution);
|
||||
cudaFree(&device_tmp);
|
||||
delete[] vect;
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Compute fitness for all solution neighbors in device without specific mapping
|
||||
* @param _sol the solution which generate the neighborhood
|
||||
*/
|
||||
|
||||
virtual void neighborhoodEval(EOT & _sol) {
|
||||
}
|
||||
|
||||
/**
|
||||
* Compute fitness for all solution neighbors in device with K-swap mapping
|
||||
* @param _sol the solution which generate the neighborhood
|
||||
* @param _mapping the array of mapping indexes for K-swap neighborhood
|
||||
* @param _Kswap the number of swap
|
||||
*/
|
||||
|
||||
void neighborhoodKswapEval(EOT & _sol, unsigned * _mapping, unsigned _Kswap) {
|
||||
|
||||
// the solution size
|
||||
unsigned _size = _sol.size();
|
||||
|
||||
// Get Current solution fitness
|
||||
Fitness fitness = _sol.fitness();
|
||||
|
||||
//Case of Permutation
|
||||
if (_Kswap == 1) {
|
||||
if (!mutex) {
|
||||
//Allocate the space for solution in the device global memory
|
||||
cudaMalloc((void**) &device_solution.vect, _size * sizeof(T));
|
||||
mutex = true;
|
||||
}
|
||||
|
||||
//Copy the solution vector from the host to device
|
||||
cudaMemcpy(device_solution.vect, _sol.vect, _size * sizeof(T),
|
||||
cudaMemcpyHostToDevice);
|
||||
|
||||
//Launch the Kernel to compute all permutation neighbors fitness
|
||||
kernelPermutation<EOT,Fitness,Neighbor,IncrementEval><<<kernel_Dim,BLOCK_SIZE >>>(incrEval,device_solution,device_FitnessArray,fitness,neighborhoodSize,_mapping,_size);
|
||||
//Copy the result from device to host
|
||||
cudaMemcpy(host_FitnessArray, device_FitnessArray, neighborhoodSize
|
||||
* sizeof(Fitness), cudaMemcpyDeviceToHost);
|
||||
}
|
||||
//Case Kswap
|
||||
else if (_Kswap > 1) {
|
||||
if (!mutex_kswap) {
|
||||
vect = new T[neighborhoodSize * _size];
|
||||
//Allocate the space for set of solution in the device global memory
|
||||
cudaMalloc((void**) &device_setSolution.vect, neighborhoodSize
|
||||
* _size * sizeof(T));
|
||||
//Allocate the space to save temporary EOT element to swap
|
||||
cudaMalloc((void**) &device_tmp.vect, neighborhoodSize
|
||||
* sizeof(T));
|
||||
mutex_kswap = true;
|
||||
}
|
||||
|
||||
for (int i = 0; i < neighborhoodSize; i++) {
|
||||
for (int j = 0; j < _size; j++) {
|
||||
vect[j + i * _size] = _sol.vect[j];
|
||||
}
|
||||
}
|
||||
|
||||
//Copy the set of solution from the host to device
|
||||
cudaMemcpy(device_setSolution.vect, vect, neighborhoodSize * _size
|
||||
* sizeof(T), cudaMemcpyHostToDevice);
|
||||
|
||||
//Launch the Kernel to compute all Kswap neighbors fitness
|
||||
kernelKswap<EOT,Fitness,Neighbor,IncrementEval><<<kernel_Dim,BLOCK_SIZE >>>(incrEval,device_setSolution,device_tmp,device_FitnessArray,fitness,neighborhoodSize,_mapping,_Kswap,_size);
|
||||
|
||||
//Copy the result from device to host
|
||||
cudaMemcpy(host_FitnessArray, device_FitnessArray, neighborhoodSize
|
||||
* sizeof(Fitness), cudaMemcpyDeviceToHost);
|
||||
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Compute fitness for all solution neighbors(K-flip of binary solution) in device
|
||||
* @param _sol the solution which generate the neighborhood
|
||||
* @param _mapping the array of mapping indexes for k-flip neighborhood
|
||||
* @param _Kflip the number of flip to do
|
||||
*/
|
||||
|
||||
void neighborhoodKflipEval(EOT & _sol, unsigned * _mapping,
|
||||
unsigned _Kflip) {
|
||||
|
||||
// the solution size
|
||||
unsigned _size = _sol.size();
|
||||
|
||||
// Get Current solution fitness
|
||||
Fitness fitness = _sol.fitness();
|
||||
if (!mutex) {
|
||||
//Allocate the space for solution in the device global memory
|
||||
cudaMalloc((void**) &device_solution.vect, _size * sizeof(T));
|
||||
mutex = true;
|
||||
}
|
||||
|
||||
//Copy the solution vector from the host to device
|
||||
cudaMemcpy(device_solution.vect, _sol.vect, _size * sizeof(T),
|
||||
cudaMemcpyHostToDevice);
|
||||
|
||||
//Launch the Kernel to compute all flip neighbors fitness
|
||||
kernelKflip<EOT,Fitness,Neighbor,IncrementEval><<<kernel_Dim,BLOCK_SIZE >>>(incrEval,device_solution,device_FitnessArray,fitness,neighborhoodSize,_mapping,_Kflip);
|
||||
|
||||
//Copy the result from device to host
|
||||
cudaMemcpy(host_FitnessArray, device_FitnessArray, neighborhoodSize
|
||||
* sizeof(Fitness), cudaMemcpyDeviceToHost);
|
||||
}
|
||||
|
||||
protected:
|
||||
|
||||
IncrementEval & incrEval;
|
||||
//NeighborhoodSize copy of solution
|
||||
EOT device_setSolution;
|
||||
//NeighborhoodSize element of EOT
|
||||
EOT device_tmp;
|
||||
//Vector of neighborhoodSize copy of solution
|
||||
T * vect;
|
||||
bool mutex_kswap;
|
||||
bool mutex;
|
||||
|
||||
};
|
||||
|
||||
#endif
|
||||
113
ParadisEO-GPU-good/src/eval/moCudaVectorEval.h
Normal file
113
ParadisEO-GPU-good/src/eval/moCudaVectorEval.h
Normal file
|
|
@ -0,0 +1,113 @@
|
|||
/*
|
||||
<moCudaVectorEval.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Karima Boufaras, Thé Van LUONG
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef moCudaVectorEval_H
|
||||
#define moCudavectorEval_H
|
||||
#include <eval/moCudaEval.h>
|
||||
#include <eval/moCudakernelEval.h>
|
||||
|
||||
/**
|
||||
* class for the parallel evaluation of neighborhood without mapping
|
||||
*/
|
||||
|
||||
template<class Neighbor, class IncrementEval>
|
||||
class moCudaVectorEval: public moCudaEval<Neighbor> {
|
||||
|
||||
public:
|
||||
|
||||
/**
|
||||
* Define type of a solution corresponding to Neighbor
|
||||
*/
|
||||
typedef typename Neighbor::EOT EOT;
|
||||
/**
|
||||
* Define type of a vector corresponding to Solution
|
||||
*/
|
||||
typedef typename EOT::ElemType T;
|
||||
/**
|
||||
* Define type of a fitness corresponding to Solution
|
||||
*/
|
||||
typedef typename EOT::Fitness Fitness;
|
||||
|
||||
using moCudaEval<Neighbor>::neighborhoodSize;
|
||||
using moCudaEval<Neighbor>::host_FitnessArray;
|
||||
using moCudaEval<Neighbor>::device_FitnessArray;
|
||||
using moCudaEval<Neighbor>::device_solution;
|
||||
using moCudaEval<Neighbor>::kernel_Dim;
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
* @param _neighborhoodSize the size of the neighborhood
|
||||
* @param _incrEval the incremental evaluation
|
||||
*/
|
||||
|
||||
moCudaVectorEval(unsigned int _neighborhoodSize, IncrementEval & _incrEval) :
|
||||
moCudaEval<Neighbor> (_neighborhoodSize), incrEval(_incrEval) {
|
||||
}
|
||||
/**
|
||||
* Compute fitness for all solution neighbors in device
|
||||
* @param _sol the solution which generate the neighborhood
|
||||
*/
|
||||
|
||||
virtual void neighborhoodEval(EOT & _sol) {
|
||||
|
||||
// the solution vector size
|
||||
unsigned _size = _sol.size();
|
||||
|
||||
// Get Current solution fitness
|
||||
Fitness fitness = _sol.fitness();
|
||||
|
||||
//Allocate the space for solution in the global memory of device
|
||||
cudaMalloc((void**) &device_solution.vect, _size * sizeof(T));
|
||||
|
||||
//Copy the solution vector from the host to device
|
||||
cudaMemcpy(device_solution.vect, _sol.vect, _size * sizeof(T),
|
||||
cudaMemcpyHostToDevice);
|
||||
|
||||
//Launch the Kernel to compute all neighbors fitness
|
||||
kernelEval<EOT,Fitness,Neighbor,IncrementEval><<<kernel_Dim,BLOCK_SIZE >>>(incrEval,device_solution,device_FitnessArray,fitness,neighborhoodSize);
|
||||
|
||||
//Copy the result from device to host
|
||||
cudaMemcpy(host_FitnessArray, device_FitnessArray, neighborhoodSize
|
||||
* sizeof(Fitness), cudaMemcpyDeviceToHost);
|
||||
|
||||
}
|
||||
|
||||
protected:
|
||||
|
||||
IncrementEval & incrEval;
|
||||
|
||||
};
|
||||
|
||||
#endif
|
||||
|
||||
206
ParadisEO-GPU-good/src/eval/moCudakernelEval.h
Normal file
206
ParadisEO-GPU-good/src/eval/moCudakernelEval.h
Normal file
|
|
@ -0,0 +1,206 @@
|
|||
/*
|
||||
<moCudakernelEval.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Karima Boufaras, Thé Van LUONG
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
#ifndef __moCudakernelEval_H
|
||||
#define __moCudakernelEval_H
|
||||
|
||||
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
|
||||
/**
|
||||
* The kernel function called from the host and executed in device to compute all neighbors fitness at one time
|
||||
* with linear mapping
|
||||
* @param _eval how to evaluate each neighbor
|
||||
* @param _solution the representation of solution( vector of int,float....)
|
||||
* @param _allFitness the array of Fitness to save all neighbors fitness
|
||||
* @param _fitness the current solution fitness
|
||||
* @param _neighborhoodsize the size of the neighborhood
|
||||
*/
|
||||
|
||||
template<class EOT, class Fitness, class Neighbor, class IncrementEval>
|
||||
|
||||
__global__ void kernelEval(IncrementEval _eval, EOT _solution, Fitness* _allFitness,
|
||||
Fitness _fitness, unsigned _neighborhoodsize) {
|
||||
|
||||
// The thread identifier within a grid block's
|
||||
int id = blockIdx.x * blockDim.x + threadIdx.x;
|
||||
// array to save index to be changed
|
||||
unsigned int index[1];
|
||||
// In this representation each id identify one and only one neighbor in neighborhood
|
||||
if (id < _neighborhoodsize) {
|
||||
//Change the id'th element of solution
|
||||
index[0]=id;
|
||||
//Compute fitness for id'th neighbor
|
||||
_allFitness[id] = _eval(_solution, _fitness,index);
|
||||
}
|
||||
}
|
||||
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
|
||||
/**
|
||||
* The kernel function called from the host and executed in device to compute all flip neighbors fitness at one time
|
||||
* @param _eval how to evaluate each neighbor
|
||||
* @param _solution representation of solution to flip
|
||||
* @param _allFitness Array of Fitness type to save all neighbors fitness
|
||||
* @param _fitness the current solution fitness
|
||||
* @param _neighborhoodsize the size of the neighborhood
|
||||
* @param _mapping the neighborhood mapping
|
||||
* @param _Kflip the number of bit to flip
|
||||
*/
|
||||
|
||||
template<class EOT, class Fitness, class Neighbor, class IncrementEval>
|
||||
|
||||
__global__ void kernelKflip(IncrementEval _eval, EOT _solution, Fitness* _allFitness,
|
||||
Fitness _fitness, unsigned _neighborhoodsize, unsigned * _mapping,unsigned _Kflip) {
|
||||
|
||||
// The thread identifier within a grid block's
|
||||
int id = blockIdx.x * blockDim.x + threadIdx.x;
|
||||
//save temporary fitness
|
||||
unsigned tmp_fitness;
|
||||
//counter of number of flip to do
|
||||
unsigned i;
|
||||
// array to save index to be changed
|
||||
unsigned index[1];
|
||||
// In this representation each id identify one and only one neighbor in neighborhood
|
||||
if (id < _neighborhoodsize) {
|
||||
//Init fitness with fitness of solution
|
||||
tmp_fitness=_fitness;
|
||||
//Evaluate neighbor after Kflip
|
||||
for(i=0;i<=_Kflip;i++){
|
||||
//The designed index to flip
|
||||
index[0]=_mapping[id + i * _neighborhoodsize];
|
||||
//Evaluate the neighbor
|
||||
tmp_fitness= _eval(_solution, tmp_fitness, index);
|
||||
|
||||
}
|
||||
//The final fitness of the Id'th neighbor
|
||||
_allFitness[id]=tmp_fitness;
|
||||
|
||||
}
|
||||
}
|
||||
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
|
||||
/**
|
||||
* The kernel function called from the host and executed in device to compute all swap neighbors fitness at one time
|
||||
* @param _eval how to evaluate each neighbor
|
||||
* @param _solution representation ofsolution to swap
|
||||
* @param _sol_tmp to save temporary a solution element to swap
|
||||
* @param _allFitness Array of Fitness type to save all neighbors fitness
|
||||
* @param _fitness the current solution fitness
|
||||
* @param _neighborhoodsize the size of the neighborhood
|
||||
* @param _mapping the neighborhood mapping
|
||||
* @param _Kswap the number of swap to do
|
||||
* @param _size the solution size
|
||||
*/
|
||||
|
||||
template<class EOT,class Fitness, class Neighbor, class IncrementEval>
|
||||
|
||||
__global__ void kernelKswap(IncrementEval _eval,EOT _solution ,EOT _sol_tmp, Fitness* _allFitness,
|
||||
Fitness _fitness, unsigned _neighborhoodsize, unsigned * _mapping,unsigned _Kswap,unsigned _size) {
|
||||
|
||||
// The thread identifier within a grid block's
|
||||
int id = blockIdx.x * blockDim.x + threadIdx.x;
|
||||
//save temporary fitness
|
||||
int tmp_fitness;
|
||||
//counter of number of swap to do
|
||||
unsigned i;
|
||||
// array to save index to be changed, solution size & thread id
|
||||
unsigned index[4];
|
||||
// In this representation each id identify one and only one neighbor in neighborhood
|
||||
if (id < _neighborhoodsize) {
|
||||
//the first index to swap
|
||||
index[0]=_mapping[id];
|
||||
//the second index to swap
|
||||
index[1]=_mapping[id +_neighborhoodsize];
|
||||
//the solution size
|
||||
index[2]=_size;
|
||||
//the thread id
|
||||
index[3]=id;
|
||||
//Init the temporary fitness with the initial solution fitness
|
||||
tmp_fitness=_fitness;
|
||||
|
||||
//Evaluate neighbor after K-swap
|
||||
for(i=2;i<=_Kswap+1;i++){
|
||||
//Evaluate neighbor with index case
|
||||
tmp_fitness=_eval(_solution, tmp_fitness, index);
|
||||
//Permut the solution
|
||||
_sol_tmp[id]=_solution[index[0]+id*index[2]];
|
||||
_solution[index[0]+id*index[2]]=_solution[index[1]+id*index[2]];
|
||||
_solution[index[1]+id*index[2]]=_sol_tmp[id];
|
||||
//Init the next swap to do
|
||||
index[0]=index[1];
|
||||
index[1]=_mapping[id +i*_neighborhoodsize];
|
||||
|
||||
}
|
||||
//save the final fitness of the id'th neighbor
|
||||
_allFitness[id]=tmp_fitness;
|
||||
}
|
||||
}
|
||||
|
||||
///////////////////////////////////////////////////////////////////////////////////////////////////////////////
|
||||
|
||||
/**
|
||||
* The kernel function called from the host and executed in device to compute all permutation neighbors fitness at one time
|
||||
* @param _eval how to evaluate each neighbor
|
||||
* @param _solution representation of solution
|
||||
* @param _allFitness Array of Fitness type to save all neighbors fitness
|
||||
* @param _fitness the current solution fitness
|
||||
* @param _neighborhoodsize the size of the neighborhood
|
||||
* @param _mapping the neighborhood mapping
|
||||
* @param _size the solution size
|
||||
*/
|
||||
|
||||
template<class EOT, class Fitness, class Neighbor, class IncrementEval>
|
||||
__global__ void kernelPermutation(IncrementEval _eval, EOT _solution, Fitness* _allFitness,
|
||||
Fitness _fitness, unsigned _neighborhoodsize, unsigned * _mapping,unsigned _size) {
|
||||
|
||||
// The thread identifier within a grid block's
|
||||
int id = blockIdx.x * blockDim.x + threadIdx.x;
|
||||
// array to save index to be changed, solution size
|
||||
unsigned index[4];
|
||||
// In this representation each id identify one and only one neighbor in neighborhood
|
||||
if (id < _neighborhoodsize) {
|
||||
//The first index of permutation
|
||||
index[0]=_mapping[id];
|
||||
//The second index of permutation
|
||||
index[1]=_mapping[id +_neighborhoodsize];
|
||||
//The solution size
|
||||
index[2]=_size;
|
||||
//Puch 0 in the 3 index
|
||||
index[3]=0;
|
||||
_allFitness[id]=_eval(_solution,_fitness,index);
|
||||
}
|
||||
}
|
||||
|
||||
#endif
|
||||
81
ParadisEO-GPU-good/src/memory/moCudaAllocator.h
Normal file
81
ParadisEO-GPU-good/src/memory/moCudaAllocator.h
Normal file
|
|
@ -0,0 +1,81 @@
|
|||
/*
|
||||
<moCudaAllocator.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Boufaras Karima, Thé Van Luong
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef _moCudaAllocator_H_
|
||||
#define _moCudaAllocator_H_
|
||||
|
||||
// CUDA includes
|
||||
#include <cutil.h>
|
||||
|
||||
/**
|
||||
* class for allocation data on GPU global memory
|
||||
*/
|
||||
|
||||
class moCudaAllocator {
|
||||
|
||||
public:
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
*/
|
||||
|
||||
moCudaAllocator() {
|
||||
}
|
||||
|
||||
/**
|
||||
*Allocate data on GPU global memory
|
||||
*@param _data the data to allocate on GPU global memory
|
||||
*@param _dataSize the size of data to allocate on GPU memory
|
||||
*/
|
||||
template<typename T>
|
||||
void operator()(T* & _data, unsigned _dataSize) {
|
||||
|
||||
//Allocate data in GPU memory
|
||||
CUDA_SAFE_CALL(cudaMalloc((void**) &_data, _dataSize * sizeof(T)));
|
||||
|
||||
// Check if data allocation is failed
|
||||
CUT_CHECK_ERROR("Allocation of data on GPU global memory failed");
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
* Destructor
|
||||
*/
|
||||
|
||||
~moCudaAllocator() {
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif
|
||||
117
ParadisEO-GPU-good/src/memory/moCudaCopy.h
Normal file
117
ParadisEO-GPU-good/src/memory/moCudaCopy.h
Normal file
|
|
@ -0,0 +1,117 @@
|
|||
/*
|
||||
<moCudaCopy.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Boufaras Karima, Thé Van Luong
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef _moCudaCopy_H_
|
||||
#define _moCudaCopy_H_
|
||||
|
||||
// CUDA includes
|
||||
#include <cutil.h>
|
||||
|
||||
/**
|
||||
* class to copy data from CPU memory to GPU global memory and vice versa
|
||||
*/
|
||||
|
||||
class moCudaCopy {
|
||||
|
||||
public:
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
*/
|
||||
|
||||
moCudaCopy() {
|
||||
}
|
||||
|
||||
/**
|
||||
*Copy data from CPU memory to GPU global memory (default copy)
|
||||
*@param _data the data representation where the data will be copied
|
||||
*@param _dataTocpy the data to copy from CPU memory to GPU memory
|
||||
*@param _dataSize the size of data to copy
|
||||
*/
|
||||
template<typename T>
|
||||
void operator()(T* & _data, T * & _dataTocpy, unsigned _dataSize) {
|
||||
|
||||
//copy data from CPU memory to GPU memory
|
||||
CUDA_SAFE_CALL(cudaMemcpy(_data, _dataTocpy, _dataSize * sizeof(T),
|
||||
cudaMemcpyHostToDevice));
|
||||
|
||||
// Check if the copy of data is failed
|
||||
CUT_CHECK_ERROR("Copy of data from CPU to GPU global memory failed");
|
||||
}
|
||||
|
||||
/**
|
||||
*Copy device data from GPU global memory to global variable declared in device
|
||||
*@param _dev_data the device global variable
|
||||
*@param _dataTocpy the data to copy GPU global memory to GPU global variable
|
||||
*/
|
||||
template<typename T>
|
||||
void operator()(T* & _dev_data, T * & _dataTocpy) {
|
||||
|
||||
//Copy n bytes from the memory area pointed to by _dataTocpy to the memory area pointed to by offset bytes from the start of symbol _dev_data
|
||||
|
||||
cudaMemcpyToSymbol(_dev_data, &_dataTocpy, sizeof(_dataTocpy));
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
*Copy data from CPU memory to GPU global memory and vice versa
|
||||
*@param _data the data representation where the data will be copied
|
||||
*@param _dataTocpy the data to copy from CPU memory to GPU memory and vice versa
|
||||
*@param _dataSize the size of data to copy
|
||||
*@param _HostToDevice the direction of copy(true if copy will be done from CPU memory to GPU memory)
|
||||
*/
|
||||
template<typename T>
|
||||
void operator()(T* & _data, T * & _dataTocpy, unsigned _dataSize,
|
||||
bool _HostToDevice) {
|
||||
|
||||
if (_HostToDevice) {
|
||||
|
||||
//copy data from CPU memory to GPU global memory
|
||||
CUDA_SAFE_CALL(cudaMemcpy(_data, _dataTocpy, _dataSize * sizeof(T),
|
||||
cudaMemcpyHostToDevice));
|
||||
}
|
||||
|
||||
else {
|
||||
//copy data from GPU global memory to GPU memory
|
||||
CUDA_SAFE_CALL(cudaMemcpy(_data, _dataTocpy, _dataSize * sizeof(T),
|
||||
cudaMemcpyDeviceToHost));
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
~moCudaCopy() {
|
||||
}
|
||||
|
||||
};
|
||||
#endif
|
||||
77
ParadisEO-GPU-good/src/memory/moCudaDesallocator.h
Normal file
77
ParadisEO-GPU-good/src/memory/moCudaDesallocator.h
Normal file
|
|
@ -0,0 +1,77 @@
|
|||
/*
|
||||
<moCudaDesallocator.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Boufaras Karima, Thé Van Luong
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef _moCudaDesallocator_H_
|
||||
#define _moCudaDesallocator_H_
|
||||
|
||||
// CUDA includes
|
||||
#include <cutil.h>
|
||||
|
||||
/**
|
||||
* class for Desallocation of data from GPU global memory
|
||||
*/
|
||||
|
||||
class moCudaDesallocator {
|
||||
|
||||
public:
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
*/
|
||||
|
||||
moCudaDesallocator() {
|
||||
}
|
||||
|
||||
/**
|
||||
*Desallocate data on GPU global memory
|
||||
*@param _data the data to desallocate from GPU global memory
|
||||
*/
|
||||
template<typename T>
|
||||
void operator()(T* & _data) {
|
||||
|
||||
//Desallocate data from GPU global memory
|
||||
cudaFree(_data);
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
* Destructor
|
||||
*/
|
||||
|
||||
~moCudaDesallocator() {
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif
|
||||
91
ParadisEO-GPU-good/src/memory/moCudaObject.h
Normal file
91
ParadisEO-GPU-good/src/memory/moCudaObject.h
Normal file
|
|
@ -0,0 +1,91 @@
|
|||
/*
|
||||
<moCudaObject.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Boufaras Karima, Thé Van Luong
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef _moCudaObject_H_
|
||||
#define _moCudaObject_H_
|
||||
|
||||
// CUDA includes
|
||||
#include <cutil.h>
|
||||
#include <memory/moCudaAllocator.h>
|
||||
#include <memory/moCudaDesallocator.h>
|
||||
#include <memory/moCudaCopy.h>
|
||||
|
||||
/**
|
||||
* class of managment of data on GPU global memory (allocation,desallocation & copy)
|
||||
*/
|
||||
|
||||
class moCudaObject {
|
||||
|
||||
public:
|
||||
|
||||
/**
|
||||
*Copy data from CPU memory to GPU global memory (default copy)
|
||||
*@param _data the data to allocate on GPU
|
||||
*@param _dataTocpy the data to copy from CPU memory to _data on GPU memory
|
||||
*@param _dataSize the size of data to copy
|
||||
*/
|
||||
template<typename T>
|
||||
void memCopy(T* & _data, T * & _dataTocpy, unsigned _dataSize) {
|
||||
malloc(_data, _dataSize);
|
||||
copy(_data, _dataTocpy, _dataSize);
|
||||
}
|
||||
|
||||
/**
|
||||
*Copy device data from GPU global memory to global variable declared in device
|
||||
*@param _dev_data the device global variable
|
||||
*@param _dataTocpy the data to copy GPU global memory to GPU global variable
|
||||
*/
|
||||
template<typename T>
|
||||
void memCopyGlobalVariable(T* & _dev_data, T * & _dataTocpy) {
|
||||
copy(_dev_data, _dataTocpy);
|
||||
}
|
||||
|
||||
/**
|
||||
*Desallocate data on GPU global memory
|
||||
*@param _data the data to desallocate from GPU global memory
|
||||
*/
|
||||
template<typename T>
|
||||
void memFree(T* & _data) {
|
||||
free(_data);
|
||||
}
|
||||
|
||||
public:
|
||||
|
||||
moCudaAllocator malloc;
|
||||
moCudaCopy copy;
|
||||
moCudaDesallocator free;
|
||||
|
||||
};
|
||||
|
||||
#endif
|
||||
85
ParadisEO-GPU-good/src/memory/moCudaSpecificData.h
Normal file
85
ParadisEO-GPU-good/src/memory/moCudaSpecificData.h
Normal file
|
|
@ -0,0 +1,85 @@
|
|||
/*
|
||||
<moCudaSpecificData.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Boufaras Karima, Thé Van Luong
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef _moCudaSpecificData_H_
|
||||
#define _moCudaSpecificData_H_
|
||||
|
||||
#include <memory/moCudaObject.h>
|
||||
|
||||
/**
|
||||
* class of managment of specific data problem
|
||||
*/
|
||||
|
||||
class moCudaSpecificData {
|
||||
|
||||
public:
|
||||
|
||||
/*
|
||||
* Default constructor
|
||||
*/
|
||||
|
||||
moCudaSpecificData() {
|
||||
sizeData = 0;
|
||||
}
|
||||
|
||||
/*
|
||||
* Load data from file given in argument
|
||||
* @param _file the name of data file
|
||||
*/
|
||||
|
||||
virtual void load(char* _file)=0;
|
||||
|
||||
/*
|
||||
* Return the size
|
||||
* @return the size of data to load
|
||||
*/
|
||||
|
||||
virtual unsigned int getSize() {
|
||||
return sizeData;
|
||||
}
|
||||
|
||||
/*
|
||||
* Set the size of data to load
|
||||
*/
|
||||
|
||||
virtual void setSize(unsigned int _size) {
|
||||
sizeData = _size;
|
||||
}
|
||||
|
||||
public:
|
||||
unsigned int sizeData;
|
||||
moCudaObject cudaObject;
|
||||
|
||||
};
|
||||
#endif
|
||||
121
ParadisEO-GPU-good/src/neighborhood/moCudaBitNeighbor.h
Normal file
121
ParadisEO-GPU-good/src/neighborhood/moCudaBitNeighbor.h
Normal file
|
|
@ -0,0 +1,121 @@
|
|||
/*
|
||||
<moCudaBitNeighbor.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Jerémie Humeau, Boufaras Karima, Thé Van LUONG
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef _moCudaBitNeighbor_h
|
||||
#define _moCudaBitNeighbor_h
|
||||
|
||||
#include <neighborhood/moBackableNeighbor.h>
|
||||
#include <neighborhood/moIndexNeighbor.h>
|
||||
|
||||
/**
|
||||
* Neighbor related to a solution vector of EOT (type)
|
||||
*/
|
||||
|
||||
template<class EOT, class Fitness = typename EOT::Fitness>
|
||||
class moCudaBitNeighbor: public moBackableNeighbor<EOT, Fitness> ,
|
||||
public moIndexNeighbor<EOT, Fitness> {
|
||||
|
||||
public:
|
||||
|
||||
using moBackableNeighbor<EOT, Fitness>::fitness;
|
||||
using moIndexNeighbor<EOT, Fitness>::key;
|
||||
|
||||
/**
|
||||
* move the solution
|
||||
* @param
|
||||
* _solution the solution to move
|
||||
*/
|
||||
|
||||
virtual void move(EOT & _solution) {
|
||||
|
||||
_solution[key] = !_solution[key];
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
* move back the solution (useful for the evaluation by modif)
|
||||
* @param
|
||||
* _solution the solution to move back
|
||||
*/
|
||||
|
||||
virtual void moveBack(EOT & _solution) {
|
||||
|
||||
_solution[key] = !_solution[key];
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
* Return the class name.
|
||||
* @return the class name as a std::string
|
||||
*/
|
||||
virtual std::string className() const {
|
||||
return "moCudaBitNeighbor";
|
||||
}
|
||||
|
||||
/**
|
||||
* Read object.\
|
||||
* Calls base class, just in case that one had something to do.
|
||||
* The read and print methods should be compatible and have the same format.
|
||||
* In principle, format is "plain": they just print a number
|
||||
* @param _is a std::istream.
|
||||
* @throw runtime_std::exception If a valid object can't be read.
|
||||
*/
|
||||
|
||||
virtual void readFrom(std::istream& _is) {
|
||||
std::string fitness_str;
|
||||
int pos = _is.tellg();
|
||||
_is >> fitness_str;
|
||||
if (fitness_str == "INVALID") {
|
||||
throw std::runtime_error("invalid fitness");
|
||||
} else {
|
||||
Fitness repFit;
|
||||
_is.seekg(pos);
|
||||
_is >> repFit;
|
||||
_is >> key;
|
||||
fitness(repFit);
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Write object. Called printOn since it prints the object _on_ a stream.
|
||||
* @param _os A std::ostream.
|
||||
*/
|
||||
|
||||
virtual void printOn(std::ostream& _os) const {
|
||||
_os << fitness() << ' ' << key << std::endl;
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif
|
||||
119
ParadisEO-GPU-good/src/neighborhood/moCudaKflipNeighborhood.h
Normal file
119
ParadisEO-GPU-good/src/neighborhood/moCudaKflipNeighborhood.h
Normal file
|
|
@ -0,0 +1,119 @@
|
|||
/*
|
||||
<moKswapNeighborhood.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Boufaras Karima, Thé Van Luong
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can ue,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef _moCudaKswapNeighborhood_h
|
||||
#define _moCudaKswapNeighborhood_h
|
||||
|
||||
#include <neighborhood/moKswapNeighborhood.h>
|
||||
#include <eval/moCudaEval.h>
|
||||
|
||||
/**
|
||||
* K-flip Neighborhood
|
||||
*/
|
||||
template<class N>
|
||||
class moCudaKflipNeighborhood: public moKswapNeighborhood<N> {
|
||||
|
||||
public:
|
||||
|
||||
/**
|
||||
* Define a Neighbor and type of a solution corresponding
|
||||
*/
|
||||
|
||||
typedef N Neighbor;
|
||||
typedef typename Neighbor::EOT EOT;
|
||||
|
||||
using moKswapNeighborhood<Neighbor>::neighborhoodSize;
|
||||
using moKswapNeighborhood<Neighbor>::currentIndex;
|
||||
using moKswapNeighborhood<Neighbor>::indices;
|
||||
using moKswapNeighborhood<Neighbor>::mapping;
|
||||
using moKswapNeighborhood<Neighbor>::Kswap;
|
||||
using moKswapNeighborhood<Neighbor>::size;
|
||||
using moKswapNeighborhood<Neighbor>::mutex;
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
* @param _size the size of solution
|
||||
* @param _size the solution size
|
||||
* @param _Kflip the number of bit to flip
|
||||
* @param _eval show how to evaluate neighborhood of a solution at one time
|
||||
*/
|
||||
|
||||
moCudaKflipNeighborhood(unsigned int _size, unsigned int _Kflip,
|
||||
moCudaEval<Neighbor>& _eval) :
|
||||
moKswapNeighborhood<Neighbor> (_size, _Kflip), eval(_eval) {
|
||||
sendMapping = true;
|
||||
cudaMalloc((void**) &device_Mapping, sizeof(unsigned int)
|
||||
* neighborhoodSize * (_Kflip + 1));
|
||||
}
|
||||
;
|
||||
|
||||
/**
|
||||
*Destructor
|
||||
*/
|
||||
|
||||
~moCudaKflipNeighborhood() {
|
||||
|
||||
cudaFree(device_Mapping);
|
||||
}
|
||||
|
||||
/**
|
||||
* Initialization of the neighborhood
|
||||
* @param _solution the solution to explore
|
||||
* @param _current the first neighbor
|
||||
*/
|
||||
|
||||
virtual void init(EOT& _solution, Neighbor& _current) {
|
||||
|
||||
moKswapNeighborhood<Neighbor>::init(_solution, _current);
|
||||
if (sendMapping) {
|
||||
cudaMemcpy(device_Mapping, mapping, (Kswap + 1) * neighborhoodSize
|
||||
* sizeof(unsigned int), cudaMemcpyHostToDevice);
|
||||
sendMapping = false;
|
||||
}
|
||||
//Compute all neighbors fitness at one time
|
||||
eval.neighborhoodKflipEval(_solution, device_Mapping, Kswap);
|
||||
}
|
||||
|
||||
/**
|
||||
* Return the class Name
|
||||
* @return the class name as a std::string
|
||||
*/
|
||||
virtual std::string className() const {
|
||||
return "moCudaKSwapNeighborhood";
|
||||
}
|
||||
|
||||
protected:
|
||||
|
||||
moCudaEval<Neighbor>& eval;
|
||||
bool sendMapping;
|
||||
unsigned int * device_Mapping;
|
||||
|
||||
};
|
||||
|
||||
#endif
|
||||
119
ParadisEO-GPU-good/src/neighborhood/moCudaKswapNeighborhood.h
Normal file
119
ParadisEO-GPU-good/src/neighborhood/moCudaKswapNeighborhood.h
Normal file
|
|
@ -0,0 +1,119 @@
|
|||
/*
|
||||
<moKswapNeighborhood.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Boufaras Karima, Thé Van Luong
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can ue,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef _moCudaKswapNeighborhood_h
|
||||
#define _moCudaKswapNeighborhood_h
|
||||
|
||||
#include <neighborhood/moKswapNeighborhood.h>
|
||||
#include <eval/moCudaEval.h>
|
||||
|
||||
/**
|
||||
* K-Swap Neighborhood
|
||||
*/
|
||||
template<class N>
|
||||
class moCudaKswapNeighborhood: public moKswapNeighborhood<N> {
|
||||
|
||||
public:
|
||||
|
||||
/**
|
||||
* Define a Neighbor and type of a solution corresponding
|
||||
*/
|
||||
|
||||
typedef N Neighbor;
|
||||
typedef typename Neighbor::EOT EOT;
|
||||
|
||||
using moKswapNeighborhood<Neighbor>::neighborhoodSize;
|
||||
using moKswapNeighborhood<Neighbor>::currentIndex;
|
||||
using moKswapNeighborhood<Neighbor>::indices;
|
||||
using moKswapNeighborhood<Neighbor>::mapping;
|
||||
using moKswapNeighborhood<Neighbor>::Kswap;
|
||||
using moKswapNeighborhood<Neighbor>::size;
|
||||
using moKswapNeighborhood<Neighbor>::mutex;
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
* @param _size the size of solution
|
||||
* @param _Kswap the number of swap
|
||||
* @param _eval show how to evaluate neighborhood of a solution at one time
|
||||
*/
|
||||
|
||||
moCudaKswapNeighborhood(unsigned int _size, unsigned int _Kswap,
|
||||
moCudaEval<Neighbor>& _eval) :
|
||||
moKswapNeighborhood<Neighbor> (_size, _Kswap), eval(_eval) {
|
||||
sendMapping = true;
|
||||
cudaMalloc((void**) &device_Mapping, sizeof(unsigned int)
|
||||
* neighborhoodSize * (Kswap + 1));
|
||||
}
|
||||
;
|
||||
|
||||
/**
|
||||
*Destructor
|
||||
*/
|
||||
|
||||
~moCudaKswapNeighborhood() {
|
||||
|
||||
cudaFree(device_Mapping);
|
||||
}
|
||||
|
||||
/**
|
||||
* Initialization of the neighborhood
|
||||
* @param _solution the solution to explore
|
||||
* @param _current the first neighbor
|
||||
*/
|
||||
|
||||
virtual void init(EOT& _solution, Neighbor& _current) {
|
||||
|
||||
moKswapNeighborhood<Neighbor>::init(_solution, _current);
|
||||
//Send Mapping for only the first time
|
||||
if (sendMapping) {
|
||||
cudaMemcpy(device_Mapping, mapping, (Kswap + 1) * neighborhoodSize
|
||||
* sizeof(unsigned int), cudaMemcpyHostToDevice);
|
||||
sendMapping = false;
|
||||
}
|
||||
//Compute all neighbors fitness at one time
|
||||
eval.neighborhoodKswapEval(_solution, device_Mapping, Kswap);
|
||||
}
|
||||
|
||||
/**
|
||||
* Return the class Name
|
||||
* @return the class name as a std::string
|
||||
*/
|
||||
virtual std::string className() const {
|
||||
return "moCudaKSwapNeighborhood";
|
||||
}
|
||||
|
||||
protected:
|
||||
|
||||
moCudaEval<Neighbor>& eval;
|
||||
bool sendMapping;
|
||||
unsigned int * device_Mapping;
|
||||
|
||||
};
|
||||
|
||||
#endif
|
||||
|
|
@ -0,0 +1,96 @@
|
|||
/*
|
||||
<moCudaOrderNeighborhood.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Jerémie Humeau, Thé Van LUONG, Karima Boufaras
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef _moCudaOrderNeighborhood_h
|
||||
#define _moCudaOrderNeighborhood_h
|
||||
|
||||
#include <neighborhood/moOrderNeighborhood.h>
|
||||
#include <eval/moCudaEval.h>
|
||||
|
||||
/**
|
||||
* An ordered neighborhood with parallel evaluation
|
||||
*/
|
||||
|
||||
template<class N>
|
||||
class moCudaOrderNeighborhood: public moOrderNeighborhood<N> {
|
||||
|
||||
public:
|
||||
|
||||
/**
|
||||
* Define type of a solution corresponding to Neighbor
|
||||
*/
|
||||
|
||||
typedef N Neighbor;
|
||||
typedef typename Neighbor::EOT EOT;
|
||||
|
||||
using moOrderNeighborhood<Neighbor>::neighborhoodSize;
|
||||
using moOrderNeighborhood<Neighbor>::currentIndex;
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
* @param _neighborhoodSize the size of the neighborhood
|
||||
* @param _eval show how to evaluate neighborhood of a solution at one time
|
||||
*/
|
||||
|
||||
moCudaOrderNeighborhood(unsigned int _neighborhoodSize,
|
||||
moCudaEval<Neighbor>& _eval) :
|
||||
moOrderNeighborhood<Neighbor> (_neighborhoodSize), eval(_eval) {
|
||||
}
|
||||
|
||||
/**
|
||||
* Initialization of the neighborhood
|
||||
*@param _solution the solution to explore
|
||||
*@param _neighbor the first neighbor
|
||||
*/
|
||||
|
||||
virtual void init(EOT & _solution, Neighbor & _neighbor) {
|
||||
|
||||
moOrderNeighborhood<Neighbor>::init(_solution, _neighbor);
|
||||
//Compute all neighbors fitness at one time
|
||||
eval.neighborhoodEval(_solution);
|
||||
}
|
||||
|
||||
/**
|
||||
* Return the class name.
|
||||
* @return the class name as a std::string
|
||||
*/
|
||||
virtual std::string className() const {
|
||||
return "moCudaOrderNeighborhood";
|
||||
}
|
||||
|
||||
protected:
|
||||
moCudaEval<Neighbor>& eval;
|
||||
};
|
||||
|
||||
#endif
|
||||
|
|
@ -0,0 +1,88 @@
|
|||
/*
|
||||
<moCudaRndWithReplNeighborhood.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Jerémie Humeau, Karima Boufaras, Thé Van LUONG
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef _moCudaRndWithReplNeighborhood_h
|
||||
#define _moCudaRndWithReplNeighborhood_h
|
||||
|
||||
#include <neighborhood/moRndWithReplNeighborhood.h>
|
||||
#include <eval/moCudaEval.h>
|
||||
|
||||
/**
|
||||
* A Random With replacement Neighborhood with parallel evaluation
|
||||
*/
|
||||
template<class Neighbor>
|
||||
class moCudaRndWithReplNeighborhood: public moRndWithReplNeighborhood<Neighbor> {
|
||||
public:
|
||||
|
||||
/**
|
||||
* Define type of a solution corresponding to Neighbor
|
||||
*/
|
||||
typedef typename Neighbor::EOT EOT;
|
||||
|
||||
using moRndWithReplNeighborhood<Neighbor>::neighborhoodSize;
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
* @param _neighborhoodSize the size of the neighborhood
|
||||
* @param _eval show how to evaluate neighborhood of a solution at one time
|
||||
*/
|
||||
moCudaRndWithReplNeighborhood(unsigned int _neighborhoodSize, moCudaEval<
|
||||
Neighbor>& _eval) :
|
||||
moRndWithReplNeighborhood<Neighbor> (_neighborhoodSize), eval(_eval) {
|
||||
}
|
||||
|
||||
/**
|
||||
* Initialization of the neighborhood
|
||||
* @param _solution the solution to explore
|
||||
* @param _neighbor the first neighbor
|
||||
*/
|
||||
virtual void init(EOT & _solution, Neighbor & _neighbor) {
|
||||
moRndWithReplNeighborhood<Neighbor>::init(_solution, _neighbor);
|
||||
//Compute all neighbors fitness at one time
|
||||
eval.neighborhoodEval(_solution);
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
* Return the class Name
|
||||
* @return the class name as a std::string
|
||||
*/
|
||||
virtual std::string className() const {
|
||||
return "moCudaRndWithReplNeighborhood";
|
||||
}
|
||||
protected:
|
||||
moCudaEval<Neighbor>& eval;
|
||||
};
|
||||
|
||||
#endif
|
||||
|
|
@ -0,0 +1,90 @@
|
|||
/*
|
||||
<moCudaRndWithoutReplNeighborhood.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Jerémie Humeau, Boufaras Karima, Thé Van LUONG
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef _moCudaRndWithoutReplNeighborhood_h
|
||||
#define _moCudaRndWithoutReplNeighborhood_h
|
||||
|
||||
#include <neighborhood/moRndWithoutReplNeighborhood.h>
|
||||
#include <eval/moCudaEval.h>
|
||||
|
||||
/**
|
||||
* A Random without replacement Neighborhood with parallel evaluation
|
||||
*/
|
||||
template<class Neighbor>
|
||||
class moCudaRndWithoutReplNeighborhood: public moRndWithoutReplNeighborhood<Neighbor> {
|
||||
public:
|
||||
|
||||
/**
|
||||
* Define type of a solution corresponding to Neighbor
|
||||
*/
|
||||
typedef typename Neighbor::EOT EOT;
|
||||
|
||||
using moRndWithoutReplNeighborhood<Neighbor>::neighborhoodSize;
|
||||
using moRndWithoutReplNeighborhood<Neighbor>::maxIndex;
|
||||
using moRndWithoutReplNeighborhood<Neighbor>::indexVector;
|
||||
/**
|
||||
* Constructor
|
||||
* @param _neighborhoodSize the size of the neighborhood
|
||||
* @param _eval show how to evaluate neighborhood of a solution at one time
|
||||
*/
|
||||
moCudaRndWithoutReplNeighborhood(unsigned int _neighborhoodSize,moCudaEval<
|
||||
Neighbor>& _eval) :
|
||||
moRndWithoutReplNeighborhood<Neighbor> (_neighborhoodSize),eval(_eval) {
|
||||
for (unsigned int i = 0; i < neighborhoodSize; i++)
|
||||
indexVector.push_back(i);
|
||||
}
|
||||
|
||||
/**
|
||||
* Initialization of the neighborhood
|
||||
* @param _solution the solution to explore
|
||||
* @param _neighbor the first neighbor
|
||||
*/
|
||||
virtual void init(EOT & _solution, Neighbor & _neighbor) {
|
||||
moRndWithoutReplNeighborhood<Neighbor>::init(_solution, _neighbor);
|
||||
//Compute all neighbors fitness at one time
|
||||
eval.neighborhoodEval(_solution);
|
||||
}
|
||||
|
||||
/**
|
||||
* Return the class Name
|
||||
* @return the class name as a std::string
|
||||
*/
|
||||
virtual std::string className() const {
|
||||
return "moCudaRndWithoutReplNeighborhood";
|
||||
}
|
||||
|
||||
protected:
|
||||
moCudaEval<Neighbor>& eval;
|
||||
};
|
||||
|
||||
#endif
|
||||
116
ParadisEO-GPU-good/src/performance/moCudaTimer.h
Normal file
116
ParadisEO-GPU-good/src/performance/moCudaTimer.h
Normal file
|
|
@ -0,0 +1,116 @@
|
|||
/*
|
||||
<moCudaTimer.h>
|
||||
Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010
|
||||
|
||||
Karima Boufaras, Thé Van LUONG
|
||||
|
||||
This software is governed by the CeCILL license under French law and
|
||||
abiding by the rules of distribution of free software. You can use,
|
||||
modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
||||
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*/
|
||||
|
||||
#ifndef _moCudaTimer_H_
|
||||
#define _moCudaTimer_H_
|
||||
|
||||
// CUDA Utility Tools
|
||||
#include <cutil.h>
|
||||
|
||||
/**
|
||||
* To compute execution time
|
||||
*/
|
||||
|
||||
class moCudaTimer {
|
||||
|
||||
public:
|
||||
|
||||
unsigned int timer;
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
*/
|
||||
|
||||
moCudaTimer() {
|
||||
|
||||
timer = 0;
|
||||
//Create timer
|
||||
cutCreateTimer(&timer);
|
||||
}
|
||||
|
||||
/**
|
||||
* Destructor
|
||||
*/
|
||||
|
||||
~moCudaTimer() {
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
* to start compute execution time
|
||||
*/
|
||||
|
||||
void start() {
|
||||
|
||||
// Start timer
|
||||
cutStartTimer(timer);
|
||||
}
|
||||
|
||||
/**
|
||||
* to stop compute execution time
|
||||
*/
|
||||
|
||||
void stop() {
|
||||
|
||||
// Stop timer
|
||||
cutStopTimer(timer);
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
* to get timer value in ms
|
||||
* @return execution time in ms
|
||||
*/
|
||||
|
||||
double getTime() {
|
||||
|
||||
// get time
|
||||
return cutGetTimerValue(timer);
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
* to delete timer
|
||||
*/
|
||||
|
||||
void deleteTimer() {
|
||||
|
||||
//Delete timer
|
||||
cutDeleteTimer(timer);
|
||||
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif
|
||||
Some files were not shown because too many files have changed in this diff Show more
Loading…
Reference in a new issue