Add scripts for parsing and archive link
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30 changed files with 1570 additions and 18 deletions
43
eo/contrib/irace/expe/beta/planO/r_iO.sh
Executable file
43
eo/contrib/irace/expe/beta/planO/r_iO.sh
Executable file
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#!/bin/bash
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#run once each problem
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. /etc/profile.d/modules.sh
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export MODULEPATH=${MODULEPATH}${MODULEPATH:+:}/opt/dev/Modules/Anaconda:/opt/dev/Modules/Compilers:/opt/dev/Modules/Frameworks:/opt/dev/Modules/Libraries:/opt/dev/Modules/Tools:/opt/dev/Modules/IDEs:/opt/dev/Modules/MPI
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module load LLVM/clang-llvm-10.0
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module load R
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dir=$1
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run=$2
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budget_irace=$3
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buckets=$4
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myhome=$5
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cp -r ${myhome}/R .
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cp -r ${myhome}/irace_files_pO .
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outdir="${run}_$(date --iso-8601=seconds)_results_irace"
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echo "start a job $(date -Iseconds)"
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for pb in $(seq 0 18) ; do
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echo "Problem ${pb}... "
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res="results_problem_${pb}"
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mkdir -p ${dir}/${outdir}/${res}
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# Fore some reason, irace absolutely need those files...
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cp ${myhome}/code/paradiseo/eo/contrib/irace/release/fastga ${dir}/${outdir}/${res}
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cat ./irace_files_pO/example.scen | sed "s%\".%\"${dir}/${outdir}/${res}%g" | sed "s/maxExperiments = 0/maxExperiments=${budget_irace}/" > ${dir}/${outdir}/${res}/example.scen
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cp ./irace_files_pO/default.instances ${dir}/${outdir}/${res}
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cp ./irace_files_pO/fastga.param ${dir}/${outdir}/${res}
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cat ./irace_files_pO/target-runner | sed "s/--problem=0/--problem=${pb}/" > ${dir}/${outdir}/${res}/target-runner
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chmod u+x ${dir}/${outdir}/${res}/target-runner
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echo "---start $(date)"
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time -p ./R/x86_64-pc-linux-gnu-library/3.6/irace/bin/irace --scenario ${dir}/${outdir}/${res}/example.scen > ${dir}/${outdir}/${res}/irace.log
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echo "---end $(date)"
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echo "done run : ${run} pb : ${pb}"
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date -Iseconds
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done
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echo "end a job $(date -Iseconds)---------------------"
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