+ script to plot on ggobi

application/eda_sa/CMakeLists.txt

@@ -25,4 +25,4 @@ FILE(GLOB SOURCES *.cpp)
 SET(EXECUTABLE_OUTPUT_PATH ${DO_BINARY_DIR})
 
 ADD_EXECUTABLE(${PROJECT_NAME} ${SOURCES})
-TARGET_LINK_LIBRARIES(${PROJECT_NAME} do ${EO_LIBRARIES} ${MO_LIBRARIES} ${Boost_LIBRARIES})
+TARGET_LINK_LIBRARIES(${PROJECT_NAME} do doutils ${EO_LIBRARIES} ${MO_LIBRARIES} ${Boost_LIBRARIES})

application/eda_sa/plot_on_ggobi.py

@@ -0,0 +1,68 @@
+#!/usr/bin/env python
+
+from pprint import *
+import sys, os
+
+if __name__ == '__main__':
+
+    # parameter phase
+
+    if len(sys.argv) < 2:
+        print 'Usage: %s [FILE]' % sys.argv[0]
+        sys.exit()
+
+    filename = sys.argv[1]
+
+    lines = open(filename).readlines()
+
+    # formatting phase
+
+    try:
+        results = [ x.split() for x in lines[1:-1] ]
+    except IOError, e:
+        print 'Error: %s' % e
+        sys.exit()
+
+    # dimension estimating phase
+
+    popsize = int(lines[0].split()[0])
+    dimsize = int(results[0][1])
+
+    # printing phase
+
+    print 'popsize: %d' % popsize
+    print 'dimsize: %d' % dimsize
+
+    print
+    pprint( results )
+
+    # cvs converting phase
+
+    i = 1
+    for x in results:
+        x.insert(0, '"%d"' % i)
+        i += 1
+
+    header = ['""', '"fitness"', '"dimsize"']
+
+    for i in range(0, dimsize):
+        header.append( '"dim%d"' % i )
+
+    results.insert(0, header)
+
+    # cvs printing phase
+
+    file_results = '\n'.join( [ ','.join( x ) for x in results ] )
+
+    print
+    print file_results
+
+    try:
+        open('%s.csv' % filename, 'w').write(file_results + '\n')
+    except IOError, e:
+        print 'Error: %s' % e
+        sys.exit()
+
+    # ggobi plotting phase
+
+    os.system('ggobi %s.csv' % filename)

do.pc

@@ -8,5 +8,5 @@ includedir=${prefix}/include/do
 Name: Distribution Object
 Description: Distribution Object
 Version: 1.0
-Libs: -L${libdir} -ldo
+Libs: -L${libdir} -ldo -ldoutils
 Cflags: -I${includedir}

src/utils/doFileSnapshot.cpp

@@ -62,7 +62,7 @@ doFileSnapshot::doFileSnapshot(std::string dirname,
 	}
     else if (!res && rmFiles)
 	{
-	    s = std::string("/bin/rm ") + _dirname+ "/" + _filename + "*";
+	    s = std::string("/bin/rm -f ") + _dirname+ "/" + _filename + "*";
 	}
     else
 	{