added new tutorial dir
git-svn-id: svn://scm.gforge.inria.fr/svnroot/paradiseo@467 331e1502-861f-0410-8da2-ba01fb791d7f
This commit is contained in:
legrand
parent
7aaffed845
commit
71169cf7f0
61 changed files with 3459 additions and 0 deletions
16
trunk/paradiseo-peo/tutorial/Lesson2/CMakeLists.txt
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16
trunk/paradiseo-peo/tutorial/Lesson2/CMakeLists.txt
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@ -0,0 +1,16 @@
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######################################################################################
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### 0) Need lesson1 directory
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######################################################################################
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SET(TUTORIAL_LESSON2_DIR ${CMAKE_CURRENT_SOURCE_DIR})
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######################################################################################
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######################################################################################
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### 1) Where must cmake go now ?
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######################################################################################
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SUBDIRS(src)
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######################################################################################
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12
trunk/paradiseo-peo/tutorial/Lesson2/lesson.param
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12
trunk/paradiseo-peo/tutorial/Lesson2/lesson.param
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## miscallenous parameters
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--debug=false
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## deployment schema
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--schema=../schema.xml
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## parameters
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--inst=../../examples/tsp/benchs/eil101.tsp
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18
trunk/paradiseo-peo/tutorial/Lesson2/schema.xml
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18
trunk/paradiseo-peo/tutorial/Lesson2/schema.xml
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<?xml version="1.0"?>
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<schema>
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<group scheduler="0">
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<node name="0" num_workers="0">
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</node>
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<node name="1" num_workers="0">
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<runner>1</runner>
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</node>
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<node name="2" num_workers="1">
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</node>
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<node name="3" num_workers="1">
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</node>
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</group>
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</schema>
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75
trunk/paradiseo-peo/tutorial/Lesson2/src/CMakeLists.txt
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75
trunk/paradiseo-peo/tutorial/Lesson2/src/CMakeLists.txt
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@ -0,0 +1,75 @@
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######################################################################################
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### 0) Set the compiler
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######################################################################################
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SET (CMAKE_CXX_COMPILER mpicxx)
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######################################################################################
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######################################################################################
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### 1) Include the sources
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######################################################################################
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INCLUDE_DIRECTORIES(${EO_SRC_DIR})
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INCLUDE_DIRECTORIES(${MO_SRC_DIR})
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INCLUDE_DIRECTORIES(${PEO_SRC_DIR})
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INCLUDE_DIRECTORIES(${TSP_EXAMPLE_DIR}/src)
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######################################################################################
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######################################################################################
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### 2) Specify where CMake can find the libraries (mandatory: before 3) )
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######################################################################################
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LINK_DIRECTORIES( ${EO_SRC_DIR}
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${EO_SRC_DIR}/utils
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${PEO_DIR}/build
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${TSP_EXAMPLE_DIR}/build)
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######################################################################################
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######################################################################################
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### 3) Define your target(s): just an executable here
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######################################################################################
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# no matter what is the OS, hopefully
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ADD_EXECUTABLE(tspExample main.cpp)
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ADD_DEPENDENCIES(tspExample tsp)
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ADD_DEPENDENCIES(tspExample peo)
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ADD_DEPENDENCIES(tspExample rmc_mpi)
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SET(EXECUTABLE_OUTPUT_PATH ${TUTORIAL_LESSON2_DIR}/build)
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######################################################################################
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######################################################################################
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### 4) Optionnal: define your target(s)'s version: no effect for windows
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######################################################################################
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SET(LESSON2_VERSION "1.0.beta")
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SET_TARGET_PROPERTIES(tspExample PROPERTIES VERSION "${LESSON2_VERSION}")
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######################################################################################
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######################################################################################
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### 5) Link the librairies
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######################################################################################
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TARGET_LINK_LIBRARIES(tspExample ${XML2_LIBS}) # define in CMakeLists.txt at PEO root dir
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TARGET_LINK_LIBRARIES(tspExample tsp)
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TARGET_LINK_LIBRARIES(tspExample peo)
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TARGET_LINK_LIBRARIES(tspExample rmc_mpi)
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TARGET_LINK_LIBRARIES(tspExample eo)
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TARGET_LINK_LIBRARIES(tspExample eoutils)
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######################################################################################
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162
trunk/paradiseo-peo/tutorial/Lesson2/src/main.cpp
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162
trunk/paradiseo-peo/tutorial/Lesson2/src/main.cpp
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// "main_ga.cpp"
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// (c) OPAC Team, LIFL, January 2006
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/*
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Contact: paradiseo-help@lists.gforge.inria.fr
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*/
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#include "param.h"
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#include "route_init.h"
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#include "route_eval.h"
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#include "order_xover.h"
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#include "edge_xover.h"
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#include "partial_mapped_xover.h"
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#include "city_swap.h"
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#include "part_route_eval.h"
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#include "merge_route_eval.h"
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#include "two_opt_init.h"
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#include "two_opt_next.h"
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#include "two_opt_incr_eval.h"
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#include <paradiseo>
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#define POP_SIZE 10
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#define NUM_GEN 100
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#define CROSS_RATE 1.0
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#define MUT_RATE 0.01
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#define NUM_PART_EVALS 2
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#define MIG_FREQ 10
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#define MIG_SIZE 10
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#define HYBRID_SIZE 3
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int main (int __argc, char * * __argv) {
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peo :: init (__argc, __argv);
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loadParameters (__argc, __argv); /* Processing some parameters relative to the tackled
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problem (TSP) */
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RouteInit route_init; /* Its builds random routes */
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RouteEval full_eval; /* Full route evaluator */
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MergeRouteEval merge_eval;
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std :: vector <eoEvalFunc <Route> *> part_eval;
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for (unsigned i = 1 ; i <= NUM_PART_EVALS ; i ++)
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part_eval.push_back (new PartRouteEval ((float) (i - 1) / NUM_PART_EVALS, (float) i / NUM_PART_EVALS));
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OrderXover order_cross; /* Recombination */
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PartialMappedXover pm_cross;
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EdgeXover edge_cross;
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CitySwap city_swap_mut; /* Mutation */
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RingTopology topo;
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/** The first EA **/
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eoPop <Route> ox_pop (POP_SIZE, route_init); /* Population */
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eoGenContinue <Route> ox_cont (NUM_GEN); /* A fixed number of iterations */
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eoCheckPoint <Route> ox_checkpoint (ox_cont); /* Checkpoint */
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peoParaPopEval <Route> ox_pop_eval (part_eval, merge_eval);
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eoStochTournamentSelect <Route> ox_select_one;
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eoSelectNumber <Route> ox_select (ox_select_one, POP_SIZE);
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eoSGATransform <Route> ox_transform (order_cross, CROSS_RATE, city_swap_mut, MUT_RATE);
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peoSeqTransform <Route> ox_para_transform (ox_transform);
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eoEPReplacement <Route> ox_replace (2);
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/* The migration policy */
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eoPeriodicContinue <Route> ox_mig_cont (MIG_FREQ); /* Migration occurs periodically */
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eoRandomSelect <Route> ox_mig_select_one; /* Emigrants are randomly selected */
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eoSelectNumber <Route> ox_mig_select (ox_mig_select_one, MIG_SIZE);
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eoPlusReplacement <Route> ox_mig_replace; /* Immigrants replace the worse individuals */
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peoAsyncIslandMig <Route> ox_mig (ox_mig_cont, ox_mig_select, ox_mig_replace, topo, ox_pop, ox_pop);
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//peoSyncIslandMig <Route> ox_mig (MIG_FREQ, ox_mig_select, ox_mig_replace, topo, ox_pop, ox_pop);
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ox_checkpoint.add (ox_mig);
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peoEA <Route> ox_ea (ox_checkpoint, ox_pop_eval, ox_select, ox_para_transform, ox_replace);
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ox_mig.setOwner (ox_ea);
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ox_ea (ox_pop); /* Application to the given population */
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/** The second EA **/
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eoPop <Route> pmx_pop (POP_SIZE, route_init); /* Population */
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eoGenContinue <Route> pmx_cont (NUM_GEN); /* A fixed number of iterations */
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eoCheckPoint <Route> pmx_checkpoint (pmx_cont); /* Checkpoint */
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peoSeqPopEval <Route> pmx_pop_eval (full_eval);
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eoRankingSelect <Route> pmx_select_one;
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eoSelectNumber <Route> pmx_select (pmx_select_one, POP_SIZE);
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eoSGATransform <Route> pmx_transform (pm_cross, CROSS_RATE, city_swap_mut, MUT_RATE);
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peoSeqTransform <Route> pmx_para_transform (pmx_transform);
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eoPlusReplacement <Route> pmx_replace;
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/* The migration policy */
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eoPeriodicContinue <Route> pmx_mig_cont (MIG_FREQ); /* Migration occurs periodically */
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eoRandomSelect <Route> pmx_mig_select_one; /* Emigrants are randomly selected */
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eoSelectNumber <Route> pmx_mig_select (pmx_mig_select_one, MIG_SIZE);
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eoPlusReplacement <Route> pmx_mig_replace; /* Immigrants replace the worse individuals */
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peoAsyncIslandMig <Route> pmx_mig (pmx_mig_cont, pmx_mig_select, pmx_mig_replace, topo, pmx_pop, pmx_pop);
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//peoSyncIslandMig <Route> pmx_mig (MIG_FREQ, pmx_mig_select, pmx_mig_replace, topo, pmx_pop, pmx_pop);
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pmx_checkpoint.add (pmx_mig);
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/* Hybridization with a Local Search */
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TwoOptInit pmx_two_opt_init;
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TwoOptNext pmx_two_opt_next;
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TwoOptIncrEval pmx_two_opt_incr_eval;
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moBestImprSelect <TwoOpt> pmx_two_opt_move_select;
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moHC <TwoOpt> hc (pmx_two_opt_init, pmx_two_opt_next, pmx_two_opt_incr_eval, pmx_two_opt_move_select, full_eval);
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eoPeriodicContinue <Route> pmx_ls_cont (MIG_FREQ); /* Hybridization occurs periodically */
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eoRandomSelect <Route> pmx_ls_select_one; /* ? */
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eoSelectNumber <Route> pmx_ls_select (pmx_ls_select_one, HYBRID_SIZE);
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eoPlusReplacement <Route> pmx_ls_replace;
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peoSyncMultiStart <Route> pmx_ls (pmx_ls_cont, pmx_ls_select, pmx_ls_replace, hc, pmx_pop);
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pmx_checkpoint.add (pmx_ls);
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peoEA <Route> pmx_ea (pmx_checkpoint, pmx_pop_eval, pmx_select, pmx_para_transform, pmx_replace);
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pmx_mig.setOwner (pmx_ea);
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pmx_ls.setOwner (pmx_ea);
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pmx_ea (pmx_pop); /* Application to the given population */
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/** The third EA **/
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eoPop <Route> edge_pop (POP_SIZE, route_init); /* Population */
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eoGenContinue <Route> edge_cont (NUM_GEN); /* A fixed number of iterations */
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eoCheckPoint <Route> edge_checkpoint (edge_cont); /* Checkpoint */
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peoSeqPopEval <Route> edge_pop_eval (full_eval);
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eoRankingSelect <Route> edge_select_one;
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eoSelectNumber <Route> edge_select (edge_select_one, POP_SIZE);
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peoParaSGATransform <Route> edge_para_transform (edge_cross, CROSS_RATE, city_swap_mut, MUT_RATE);
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eoPlusReplacement <Route> edge_replace;
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/* The migration policy */
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eoPeriodicContinue <Route> edge_mig_cont (MIG_FREQ); /* Migration occurs periodically */
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eoRandomSelect <Route> edge_mig_select_one; /* Emigrants are randomly selected */
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eoSelectNumber <Route> edge_mig_select (edge_mig_select_one, MIG_SIZE);
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eoPlusReplacement <Route> edge_mig_replace; /* Immigrants replace the worse individuals */
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peoAsyncIslandMig <Route> edge_mig (edge_mig_cont, edge_mig_select, edge_mig_replace, topo, edge_pop, edge_pop);
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//peoSyncIslandMig <Route> edge_mig (MIG_FREQ, edge_mig_select, edge_mig_replace, topo, edge_pop, edge_pop);
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edge_checkpoint.add (edge_mig);
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peoEA <Route> edge_ea (edge_checkpoint, edge_pop_eval, edge_select, edge_para_transform, edge_replace);
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edge_mig.setOwner (edge_ea);
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edge_ea (edge_pop); /* Application to the given population */
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peo :: run ();
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peo :: finalize (); /* Termination */
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return 0;
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}
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@ -0,0 +1,241 @@
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# Doxyfile 1.4.7
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#---------------------------------------------------------------------------
|
||||
# Project related configuration options
|
||||
#---------------------------------------------------------------------------
|
||||
PROJECT_NAME = "ParadisEO-PEO Lesson2"
|
||||
PROJECT_NUMBER = 0.1
|
||||
OUTPUT_DIRECTORY = ../../docs/html/lesson2
|
||||
CREATE_SUBDIRS = NO
|
||||
OUTPUT_LANGUAGE = English
|
||||
USE_WINDOWS_ENCODING = NO
|
||||
BRIEF_MEMBER_DESC = YES
|
||||
REPEAT_BRIEF = YES
|
||||
ABBREVIATE_BRIEF = "The $name class" \
|
||||
"The $name widget" \
|
||||
"The $name file" \
|
||||
is \
|
||||
provides \
|
||||
specifies \
|
||||
contains \
|
||||
represents \
|
||||
a \
|
||||
an \
|
||||
the
|
||||
ALWAYS_DETAILED_SEC = NO
|
||||
INLINE_INHERITED_MEMB = NO
|
||||
FULL_PATH_NAMES = NO
|
||||
STRIP_FROM_PATH =
|
||||
STRIP_FROM_INC_PATH =
|
||||
SHORT_NAMES = NO
|
||||
JAVADOC_AUTOBRIEF = YES
|
||||
MULTILINE_CPP_IS_BRIEF = NO
|
||||
DETAILS_AT_TOP = NO
|
||||
INHERIT_DOCS = YES
|
||||
SEPARATE_MEMBER_PAGES = NO
|
||||
TAB_SIZE = 8
|
||||
ALIASES =
|
||||
OPTIMIZE_OUTPUT_FOR_C = NO
|
||||
OPTIMIZE_OUTPUT_JAVA = NO
|
||||
BUILTIN_STL_SUPPORT = NO
|
||||
DISTRIBUTE_GROUP_DOC = NO
|
||||
SUBGROUPING = YES
|
||||
#---------------------------------------------------------------------------
|
||||
# Build related configuration options
|
||||
#---------------------------------------------------------------------------
|
||||
EXTRACT_ALL = NO
|
||||
EXTRACT_PRIVATE = YES
|
||||
EXTRACT_STATIC = YES
|
||||
EXTRACT_LOCAL_CLASSES = YES
|
||||
EXTRACT_LOCAL_METHODS = NO
|
||||
HIDE_UNDOC_MEMBERS = YES
|
||||
HIDE_UNDOC_CLASSES = YES
|
||||
HIDE_FRIEND_COMPOUNDS = NO
|
||||
HIDE_IN_BODY_DOCS = NO
|
||||
INTERNAL_DOCS = NO
|
||||
CASE_SENSE_NAMES = YES
|
||||
HIDE_SCOPE_NAMES = NO
|
||||
SHOW_INCLUDE_FILES = YES
|
||||
INLINE_INFO = YES
|
||||
SORT_MEMBER_DOCS = NO
|
||||
SORT_BRIEF_DOCS = NO
|
||||
SORT_BY_SCOPE_NAME = NO
|
||||
GENERATE_TODOLIST = YES
|
||||
GENERATE_TESTLIST = YES
|
||||
GENERATE_BUGLIST = YES
|
||||
GENERATE_DEPRECATEDLIST= YES
|
||||
ENABLED_SECTIONS =
|
||||
MAX_INITIALIZER_LINES = 30
|
||||
SHOW_USED_FILES = YES
|
||||
SHOW_DIRECTORIES = NO
|
||||
FILE_VERSION_FILTER =
|
||||
#---------------------------------------------------------------------------
|
||||
# configuration options related to warning and progress messages
|
||||
#---------------------------------------------------------------------------
|
||||
QUIET = YES
|
||||
WARNINGS = YES
|
||||
WARN_IF_UNDOCUMENTED = YES
|
||||
WARN_IF_DOC_ERROR = YES
|
||||
WARN_NO_PARAMDOC = NO
|
||||
WARN_FORMAT = "$file:$line: $text"
|
||||
WARN_LOGFILE =
|
||||
#---------------------------------------------------------------------------
|
||||
# configuration options related to the input files
|
||||
#---------------------------------------------------------------------------
|
||||
INPUT = .
|
||||
FILE_PATTERNS = *.cpp \
|
||||
*.h \
|
||||
NEWS \
|
||||
README
|
||||
RECURSIVE = YES
|
||||
EXCLUDE =
|
||||
EXCLUDE_SYMLINKS = NO
|
||||
EXCLUDE_PATTERNS =
|
||||
EXAMPLE_PATH =
|
||||
EXAMPLE_PATTERNS = *
|
||||
EXAMPLE_RECURSIVE = NO
|
||||
IMAGE_PATH = ../../docs/images
|
||||
INPUT_FILTER =
|
||||
FILTER_PATTERNS =
|
||||
FILTER_SOURCE_FILES = NO
|
||||
#---------------------------------------------------------------------------
|
||||
# configuration options related to source browsing
|
||||
#---------------------------------------------------------------------------
|
||||
SOURCE_BROWSER = YES
|
||||
INLINE_SOURCES = NO
|
||||
STRIP_CODE_COMMENTS = YES
|
||||
REFERENCED_BY_RELATION = YES
|
||||
REFERENCES_RELATION = YES
|
||||
REFERENCES_LINK_SOURCE = YES
|
||||
USE_HTAGS = NO
|
||||
VERBATIM_HEADERS = YES
|
||||
#---------------------------------------------------------------------------
|
||||
# configuration options related to the alphabetical class index
|
||||
#---------------------------------------------------------------------------
|
||||
ALPHABETICAL_INDEX = YES
|
||||
COLS_IN_ALPHA_INDEX = 3
|
||||
IGNORE_PREFIX = peo
|
||||
#---------------------------------------------------------------------------
|
||||
# configuration options related to the HTML output
|
||||
#---------------------------------------------------------------------------
|
||||
GENERATE_HTML = YES
|
||||
HTML_OUTPUT = html
|
||||
HTML_FILE_EXTENSION = .html
|
||||
HTML_HEADER =
|
||||
HTML_FOOTER =
|
||||
HTML_STYLESHEET =
|
||||
HTML_ALIGN_MEMBERS = YES
|
||||
GENERATE_HTMLHELP = NO
|
||||
CHM_FILE =
|
||||
HHC_LOCATION =
|
||||
GENERATE_CHI = NO
|
||||
BINARY_TOC = NO
|
||||
TOC_EXPAND = NO
|
||||
DISABLE_INDEX = NO
|
||||
ENUM_VALUES_PER_LINE = 4
|
||||
GENERATE_TREEVIEW = YES
|
||||
TREEVIEW_WIDTH = 250
|
||||
#---------------------------------------------------------------------------
|
||||
# configuration options related to the LaTeX output
|
||||
#---------------------------------------------------------------------------
|
||||
GENERATE_LATEX = YES
|
||||
LATEX_OUTPUT = latex
|
||||
LATEX_CMD_NAME = latex
|
||||
MAKEINDEX_CMD_NAME = makeindex
|
||||
COMPACT_LATEX = NO
|
||||
PAPER_TYPE = a4wide
|
||||
EXTRA_PACKAGES =
|
||||
LATEX_HEADER =
|
||||
PDF_HYPERLINKS = YES
|
||||
USE_PDFLATEX = YES
|
||||
LATEX_BATCHMODE = NO
|
||||
LATEX_HIDE_INDICES = NO
|
||||
#---------------------------------------------------------------------------
|
||||
# configuration options related to the RTF output
|
||||
#---------------------------------------------------------------------------
|
||||
GENERATE_RTF = NO
|
||||
RTF_OUTPUT = rtf
|
||||
COMPACT_RTF = NO
|
||||
RTF_HYPERLINKS = NO
|
||||
RTF_STYLESHEET_FILE =
|
||||
RTF_EXTENSIONS_FILE =
|
||||
#---------------------------------------------------------------------------
|
||||
# configuration options related to the man page output
|
||||
#---------------------------------------------------------------------------
|
||||
GENERATE_MAN = YES
|
||||
MAN_OUTPUT = man
|
||||
MAN_EXTENSION = .3
|
||||
MAN_LINKS = NO
|
||||
#---------------------------------------------------------------------------
|
||||
# configuration options related to the XML output
|
||||
#---------------------------------------------------------------------------
|
||||
GENERATE_XML = NO
|
||||
XML_OUTPUT = xml
|
||||
XML_SCHEMA =
|
||||
XML_DTD =
|
||||
XML_PROGRAMLISTING = YES
|
||||
#---------------------------------------------------------------------------
|
||||
# configuration options for the AutoGen Definitions output
|
||||
#---------------------------------------------------------------------------
|
||||
GENERATE_AUTOGEN_DEF = NO
|
||||
#---------------------------------------------------------------------------
|
||||
# configuration options related to the Perl module output
|
||||
#---------------------------------------------------------------------------
|
||||
GENERATE_PERLMOD = NO
|
||||
PERLMOD_LATEX = NO
|
||||
PERLMOD_PRETTY = YES
|
||||
PERLMOD_MAKEVAR_PREFIX =
|
||||
#---------------------------------------------------------------------------
|
||||
# Configuration options related to the preprocessor
|
||||
#---------------------------------------------------------------------------
|
||||
ENABLE_PREPROCESSING = YES
|
||||
MACRO_EXPANSION = NO
|
||||
EXPAND_ONLY_PREDEF = NO
|
||||
SEARCH_INCLUDES = YES
|
||||
INCLUDE_PATH =
|
||||
INCLUDE_FILE_PATTERNS =
|
||||
PREDEFINED =
|
||||
EXPAND_AS_DEFINED =
|
||||
SKIP_FUNCTION_MACROS = YES
|
||||
#---------------------------------------------------------------------------
|
||||
# Configuration::additions related to external references
|
||||
#---------------------------------------------------------------------------
|
||||
TAGFILES = ../../../paradiseo-mo/docs/eo.doxytag=../../../../../paradiseo-mo/docs/html \
|
||||
../../../paradiseo-mo/docs/mo.doxytag=../../../../../paradiseo-mo/docs/html \
|
||||
../../docs/paradiseo-peo.doxytag=../../ \
|
||||
../shared/paradiseo-peo-lsn-shared.doxytag=../../lsnshared/html
|
||||
GENERATE_TAGFILE = ../../docs/paradiseo-peo-lsn.doxytag
|
||||
ALLEXTERNALS = NO
|
||||
EXTERNAL_GROUPS = YES
|
||||
PERL_PATH = /usr/bin/perl
|
||||
#---------------------------------------------------------------------------
|
||||
# Configuration options related to the dot tool
|
||||
#---------------------------------------------------------------------------
|
||||
CLASS_DIAGRAMS = YES
|
||||
HIDE_UNDOC_RELATIONS = YES
|
||||
HAVE_DOT = NO
|
||||
CLASS_GRAPH = YES
|
||||
COLLABORATION_GRAPH = YES
|
||||
GROUP_GRAPHS = YES
|
||||
UML_LOOK = NO
|
||||
TEMPLATE_RELATIONS = NO
|
||||
INCLUDE_GRAPH = YES
|
||||
INCLUDED_BY_GRAPH = YES
|
||||
CALL_GRAPH = NO
|
||||
CALLER_GRAPH = NO
|
||||
GRAPHICAL_HIERARCHY = YES
|
||||
DIRECTORY_GRAPH = YES
|
||||
DOT_IMAGE_FORMAT = png
|
||||
DOT_PATH =
|
||||
DOTFILE_DIRS =
|
||||
MAX_DOT_GRAPH_WIDTH = 1024
|
||||
MAX_DOT_GRAPH_HEIGHT = 1024
|
||||
MAX_DOT_GRAPH_DEPTH = 0
|
||||
DOT_TRANSPARENT = NO
|
||||
DOT_MULTI_TARGETS = NO
|
||||
GENERATE_LEGEND = YES
|
||||
DOT_CLEANUP = YES
|
||||
#---------------------------------------------------------------------------
|
||||
# Configuration::additions related to the search engine
|
||||
#---------------------------------------------------------------------------
|
||||
SEARCHENGINE = YES
|
||||
Loading…
Add table
Add a link
Reference in a new issue