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11
CONTRIBUTING.md
View file

@ -19,9 +19,8 @@ Contribution Workflow
The maintainer(s) will try to answer under a couple of weeks, if not, do not hesitate to send an e-mail.
If you're not familiar with Git and merge requests, start by cloning one of the main repository:
If you're not familiar with Git and merge requests, start by cloning the main repository:
- `git clone https://github.com/nojhan/paradiseo.git`
- `git clone https://scm.gforge.inria.fr/anonscm/git/paradiseo/paradiseo.git`
Git workflow
@ -38,7 +37,7 @@ git checkout -b <my_feature> # Always work on a dedicated branch.
git commit <whatever>
mkdir build
cd build
cmake -DCMAKE_BUILD_TYPE=Debug -BUILD_TESTING=ON -DENABLE_CMAKE_TESTING=ON .. && make && ctest # Always test.
cmake -DCMAKE_BUILD_TYPE=Debug -DBUILD_TESTING=ON -DENABLE_CMAKE_TESTING=ON .. && make && ctest # Always test.
cd ..
git pull origin master # Always check that your modification still merges.
```
@ -46,7 +45,7 @@ git pull origin master # Always check that your modification still merges.
If everything went without error, you can either send the patch or submit a merge request.
To do so, you can either:
- submit a "pull request" on Github: [nojhan/paradiseo](https://github.com/nojhan/paradiseo),
- or send a patch on the [ParadisEO mailing list](https://lists.gforge.inria.fr/cgi-bin/mailman/listinfo/paradiseo-users).
- or [open an issue](https://github.com/nojhan/paradiseo/issues) to discuss your proposed changes.
See below for the details.
@ -79,6 +78,6 @@ git pull origin master
git diff master <my_feature> > my_feature.patch
```
Then send the `my_feature.patch` (along with your explanations about why the maintainer should merge your modifications)
to the [mailing list](https://lists.gforge.inria.fr/cgi-bin/mailman/listinfo/paradiseo-users).
Then [open an issue](https://github.com/nojhan/paradiseo/issues) with `my_feature.patch` attached
(along with your explanations about why the maintainer should merge your modifications).

4
ForRelease
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@ -22,7 +22,7 @@ When reaching stable versions:
insanely fast.
Learn more about EO on the official website:
http://eodev.sourceforge.net/
https://nojhan.github.io/paradiseo/
You will find the release x.y.z at the following address:
https://sourceforge.net/projects/eodev/files/eo/
@ -39,7 +39,7 @@ When reaching stable versions:
- Post the message to:
- EO news https://sourceforge.net/news/?group_id=9775
- EO mailing list: eodev-main@lists.sourceforge.net
- ParadisEO mailing list: paradiseo-users@lists.gforge.inria.fr
- ParadisEO: https://github.com/nojhan/paradiseo/issues
- EC-digest maling list: ec-digest-l@listserv.gmu.edu
- JET mailing list: jet@inria.fr

26
INSTALL.md
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@ -9,9 +9,9 @@ Just put it somewhere on your development computer, compile it from here and ind
Build
-----
Paradiseo is mainly developed for Linux, on which it is straightforward to install a C++ build chain. For example, on Ubuntu 18.04:
Paradiseo is mainly developed for Linux, on which it is straightforward to install a C++ build chain. For example, on Ubuntu:
```bash
sudo apt install g++-8 cmake make libeigen3-dev libopenmpi-dev doxygen graphviz libgnuplot-iostream-dev
sudo apt install g++ cmake make libeigen3-dev libopenmpi-dev doxygen graphviz libgnuplot-iostream-dev
```
Paradiseo use the CMake build system, so building it should be as simple as:
@ -67,7 +67,7 @@ Feel free to test with another compiler and to send us your report.
As of today, we cannot guarantee that it will be easy to
install ParadisEO under Windows if you're a beginner.
There is still some (possibly outdated) help about oldest version on the [Website](http://paradiseo.gforge.inria.fr/).
There is still some (possibly outdated) help about oldest version on the [Website](https://nojhan.github.io/paradiseo/).
If you know how to install a working compiler and the dependencies,
you may follow the same steps than the Linux process below.
@ -89,9 +89,9 @@ Some features are only available if some dependencies are installed:
- Doxygen is needed to build the API documentation, and you should also install graphviz if you want the class relationship diagrams.
- GNUplot is needed to have the… GNUplot graphs at checkpoints.
To install all those dependencies at once under Ubuntu (18.04), just type:
To install all those dependencies at once under Ubuntu, just type:
```bash
sudo apt install g++-8 cmake make libeigen3-dev libopenmpi-dev doxygen graphviz libgnuplot-iostream-dev.
sudo apt install g++ cmake make libeigen3-dev libopenmpi-dev doxygen graphviz libgnuplot-iostream-dev
```
@ -144,20 +144,10 @@ this can be helpful if you don't need other modules with more complex dependenci
Shared Memory Processing (SMP) module
-------------------------------------
The SMP module requires gcc 4.7 or higher. This is due to the fact that it uses the new C++ standard.
At the moment, the SMP module does not work on Windows or Mac OS X since MinGW does not provide support for std::thread and Apple does not supply a recent version of gcc (but you can try to compile gcc 4.7 by yourself).
ParadisEO requires C++17, so any modern compiler (GCC, Clang) should work.
To enable the compilation of the SMP module, just set the `SMP` option.
Depending on your distribution, you might have to give to CMake the path of gcc and g++ 4.7.
This is the case for Ubuntu 12.04 LTS for instance.
If you are in that case and assuming you have a standard path for gcc et g++ 4.7:
```bash
cmake .. -DSMP=true -DCMAKE_C_COMPILER=/usr/bin/gcc-4.7 -DCMAKE_CXX_COMPILER=/usr/bin/g++-4.7
```
Estimating Distribution Objects (EDO) module
--------------------------------------------
@ -178,12 +168,12 @@ Targets for the build system (usually `make`) are:
- `doc` for all documentations,
- `doc-eo` for building EO documentation,
- `doc-mo` for MO,
- `doc-edo` for MO,
- `doc-edo` for EDO,
- `doc-moeo` for MOEO,
- `doc-smp` for SMP.
Each documentation are generated separatly in the module build folder.
For instance, after the generation of the MO documentation, you will find it in `build/paradise-mo/doc`.
For instance, after the generation of the MO documentation, you will find it in `build/mo/doc`.
Examples
--------

10
README.md
View file

@ -16,8 +16,8 @@ It focus on the efficiency of the implementation of solvers, by providing:
# Very Quick Start
1. Use a recent Linux, like an Ubuntu.
2. `sudo apt install g++-8 cmake make libeigen3-dev libopenmpi-dev doxygen graphviz libgnuplot-iostream-dev`
1. Use a recent Linux, like Ubuntu.
2. `sudo apt install g++ cmake make libeigen3-dev libopenmpi-dev doxygen graphviz libgnuplot-iostream-dev`
3. From the Paradiseo directory: `mkdir build ; cd build ; cmake -D CMAKE_BUILD_TYPE=Release -DEDO=ON .. && make -j`
4. Copy-paste this CMA-ES code in `cmaes.cpp`:
```cpp
@ -173,7 +173,7 @@ Stable versions should however work on Windows and any Unix-like operating syste
# Code
The latest stable version is on the official Git repository of INRIA: `git clone git://scm.gforge.inria.fr/paradiseo/paradiseo.git`
The latest version is on the official Git repository: `git clone https://github.com/nojhan/paradiseo.git`
## Dependencies
@ -187,7 +187,7 @@ Some features are only available if some dependencies are installed:
- Doxygen is needed to build the API documentation, and you should also install graphviz if you want the class relationship diagrams.
- GNUplot is needed to have the… GNUplot graphs at checkpoints.
To install all those dependencies at once under Ubuntu (18.04), just type: `sudo apt install g++-8 cmake make libeigen3-dev libopenmpi-dev doxygen graphviz libgnuplot-iostream-dev`.
To install all those dependencies at once under Ubuntu, just type: `sudo apt install g++ cmake make libeigen3-dev libopenmpi-dev doxygen graphviz libgnuplot-iostream-dev`.
## Compilation
@ -237,7 +237,7 @@ benchmark libraries are in `paradiseo/problems`.
For academic articles, books, more tutorials, presentations slides,
real life example of solvers and contact information,
please see the web site (available in `paradiseo/website/index.html`).
please see the web site (available in `docs/index.html`).
# Citing Paradiseo

2
cmake/Package.cmake
View file

@ -53,7 +53,7 @@ set(CPACK_PACKAGE_DESCRIPTION "ParadisEO is a white-box object-oriented framewor
set(CPACK_RESOURCE_FILE_LICENSE "${CMAKE_CURRENT_SOURCE_DIR}/LICENSE")
set(CPACK_PACKAGE_DESCRIPTION_SUMMARY "A Software Framework for Metaheuristics")
set(CPACK_PACKAGE_VENDOR "Inria/Thales")
set(CPACK_PACKAGE_CONTACT "paradiseo-help@lists.gforge.inria.fr")
set(CPACK_PACKAGE_CONTACT "https://github.com/nojhan/paradiseo/issues")
set(CPACK_PACKAGE_VERSION ${VERSION_MAJOR}.${VERSION_MINOR}.${VERSION_PATCH})
set(CPACK_STRIP_FILES ${PACKAGE_NAME})
set(CPACK_SOURCE_STRIP_FILES "bin/${PROJECT_NAME}")

147
docs/index.html
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@ -136,7 +136,7 @@
<p>As <em class="logo">Paradis<span class="logo_eo">eo</span></em> is a development framework, you do not really need to install it on all your systems. Just put it somewhere on your development computer, compile it from here and indicate where to find it to your favorite build system.</p>
<p><em class="logo">Paradis<span class="logo_eo">eo</span></em> is mainly developed for Linux, on which it is straightforward to install a C++ build chain.
For example, on Ubuntu 18.04: <code class="command">sudo apt install g++-8 cmake make libeigen3-dev libopenmpi-dev doxygen graphviz libgnuplot-iostream-dev</code></p>
For example, on Ubuntu: <code class="command">sudo apt install g++ cmake make libeigen3-dev libopenmpi-dev doxygen graphviz libgnuplot-iostream-dev</code></p>
<p><em class="logo">Paradis<span class="logo_eo">eo</span></em> use the CMake build system, so building it should be as simple as:
<code class="command">mkdir build ; cd build ; cmake -DEDO=ON .. && make -j</code></p>
@ -234,12 +234,13 @@
<div id="Gethelp">
<h2><a name="Gethelp"></a>Get help</h2>
<p>If you need <em>immediate support or have any question</em>, the best way to get
answers is to send an email to <a href='mailto:paradiseo-help@lists.gforge.inria.fr'>paradiseo-help@lists.gforge.inria.fr</a>. You can also <a href='http://lists.gforge.inria.fr/pipermail/paradiseo-help/'>consult the help archives</a>, subscribe to our <a href='http://lists.gforge.inria.fr/cgi-bin/mailman/listinfo/paradiseo-users'>(low traffic) mailing-list</a> or <a href='http://lists.gforge.inria.fr/pipermail/paradiseo-users/'>consult its archives</a>.
<p>If you need <em>immediate support or have any question</em>, you can:
<ul>
<li><a href="https://github.com/nojhan/paradiseo/issues">Open an issue</a> on GitHub.</li>
<li>Join the official <a href="https://app.element.io/#/room/#paradiseo:matrix.org">Matrix chatroom</a> (<em>#paradiseo:matrix.org</em>), using the online webchat or your favorite <a href="https://element.io">Element.io</a> client.</li>
</ul>
</p>
<p>Alternatively, you can join us on the official chatroom. You can try the <a href="https://app.element.io/#/room/#paradiseo:matrix.org">online webchat app</a>, or if you already use <a href="https://element.io">Element.io</a>, you can directly connect to the <em>#paradiseo:matrix.org</em> multi-user chatroom with your favorite client.</p>
</div>
</div>
@ -531,7 +532,7 @@
<p>Recent versions of <em class="logo">Paradis<span class="logo_eo">eo</span></em> uses the <a href="http://www.cmake.org">CMake</a> portable build system, that permits to easily generate a build script for your environment.</p>
<p> If you have tested <em class="logo">Paradis<span class="logo_eo">eo</span></em> on a system not listed here, please <a href="mailto:eodev-main@lists.sourceforge.net?subject=test-report">let
<p> If you have tested <em class="logo">Paradis<span class="logo_eo">eo</span></em> on a system not listed here, please <a href="https://github.com/nojhan/paradiseo/issues">let
us know</a>. </p>
</div>
@ -861,7 +862,7 @@
<li>
<p>The core EO module is described in the following scientific article:
<blockquote>M. Keijzer, J.J. Merelo, G. Romero, G., M. Schoenauer,
<a href= "http://www.lri.fr/~marc/EO/EO-EA01.ps.gz">Evolving
<a href= "https://doi.org/10.1007/3-540-46033-0_13">Evolving
objects: A general purpose evolutionary computation
library</a>, <i>Artificial Evolution</i>, <b>2310</b>, 829--888 (2002).</blockquote>
</p>
@ -875,7 +876,7 @@
<li>
<p>The multi-objective module (MOEO) is described in:
<blockquote>A. Liefooghe, M. Basseur, L. Jourdan, E.-G. Talbi, <a href="http://www2.lifl.fr/~jourdan/publi/jourdan_EMO07_A.pdf"><em class="logo">Paradis<span class="logo_eo">eo</span></em>-MOEO: A Framework for Evolutionary Multi-objective Optimization</a>, EMO 2007, LNCS Vol. 4403, pp. 386-400, Matsushima, Japan.</blockquote>
<blockquote>A. Liefooghe, M. Basseur, L. Jourdan, E.-G. Talbi, <a href="https://doi.org/10.1007/978-3-540-70928-2_31"><em class="logo">Paradis<span class="logo_eo">eo</span></em>-MOEO: A Framework for Evolutionary Multi-objective Optimization</a>, EMO 2007, LNCS Vol. 4403, pp. 386-400, Matsushima, Japan.</blockquote>
</p>
</li>
@ -887,7 +888,7 @@
<li>
<p>A book about metaheuristics use <em class="logo">Paradis<span class="logo_eo">eo</span></em> as its framework of choice and explains in details several of its concepts, along with algorithmics content:
<blockquote>El-Ghazali Talbi, <a href="http://eu.wiley.com/WileyCDA/WileyTitle/productCd-0470278587.html">Metaheuristics: from design to implementation</a>, Wiley, 2009.
<blockquote>El-Ghazali Talbi, <a href="https://www.wiley.com/en-us/Metaheuristics:+From+Design+to+Implementation-p-9780470278581">Metaheuristics: from design to implementation</a>, Wiley, 2009.
(624pp),
ISBN: 978-0-470-27858-1</blockquote>
</p>
@ -1026,24 +1027,24 @@ undiscovered knowledge.
<h3>Paradiseo-EO</h3>
<ul>
<li> A functional and "philosophical" overview of the EO module was presented at <a href="http://www.cmap.polytechnique.fr/%7Eea01/">EA'01 conference</a>.
You can download <a href="https://www.lri.fr/~marc/EO/eo/doc/EO_EA2001.pdf">the paper</a>
or <a href="https://www.lri.fr/~marc/EO/eo/doc/LeCreusot.pdf">the
slides</a>.</li>
<li><strong><a href='http://paradiseo.gforge.inria.fr/addon/paradiseo-eo/concepts/paradiseo-eo-design.pdf'>Metaheuristics for Combinatorial Optimization</a></strong> [pdf] by E-G. Talbi and S.Cahon: provides general concept on metaheuristics for combinatorial optimization.
</li><li><strong><a href='http://paradiseo.gforge.inria.fr/addon/paradiseo-eo/concepts/paradiseo-eo-implem.pdf'>Reusable Design of Metaheuristics</a></strong> [pdf] by S.Cahon, E-G. Talbi and N. Melab: explains how to use Paradiseo-EO with a simple example.
<li> A functional and "philosophical" overview of the EO module was presented at EA'01 conference.
You can download <a href="https://github.com/nojhan/paradiseo/blob/master/eo/doc/EO_EA2001.pdf">the paper</a>
or <a href="https://github.com/nojhan/paradiseo/blob/master/eo/doc/LeCreusot.pdf">the
slides</a> (also available locally in <code>eo/doc/</code>).</li>
<li><strong>Metaheuristics for Combinatorial Optimization</strong> [pdf] by E-G. Talbi and S.Cahon: provides general concept on metaheuristics for combinatorial optimization. [No longer available online]
</li><li><strong>Reusable Design of Metaheuristics</strong> [pdf] by S.Cahon, E-G. Talbi and N. Melab: explains how to use Paradiseo-EO with a simple example. [No longer available online]
</li></ul>
<h3>Paradiseo-MO</h3>
<ul><li><strong><a href='http://paradiseo.gforge.inria.fr/addon/paradiseo-mo/concepts/paradiseo-newmo-design.pdf'>Reusable Design of Local Searches and Tools for Landscape Analysis</a></strong> [pdf] by S.Verel, A.Liefooghe and J.Humeau: explains the new design of Paradiseo-MO.
<ul><li><strong>Reusable Design of Local Searches and Tools for Landscape Analysis</strong> [pdf] by S.Verel, A.Liefooghe and J.Humeau: explains the new design of Paradiseo-MO. [No longer available online]
</li><li><strong><a href='https://hal.inria.fr/hal-00665421v2'><em class="logo">Paradis<span class="logo_eo">eo</span></em>-MO: From fitness landscape analysis to efficient local search algorithms</a></strong> [pdf] by J.Humeau, A.Liefooghe, E-G. Talbi, and S.Verel (presented at ROADEF 2012).
</li></ul>
<h3>Paradiseo-MOEO</h3>
<ul><li><strong><a href='http://paradiseo.gforge.inria.fr/addon/paradiseo-moeo/concepts/paradiseo-moeo-design.pdf'>Metaheuristics for Multi-objective Optimization</a></strong> [pdf] by E.-G. Talbi and the <em class="logo">Paradis<span class="logo_eo">eo</span></em> group: presents multi-objective optimization concepts, a taxonomy of resolution methods and gives performance evaluation examples.
</li><li><strong><a href='http://paradiseo.gforge.inria.fr/addon/paradiseo-moeo/concepts/paradiseo-moeo-implem.pdf'>Reusable Design of Metaheuristics for Multi-objective Optimization</a></strong> [pdf] by E.-G. Talbi and the <em class="logo">Paradis<span class="logo_eo">eo</span></em> group: explains how to implement metaheuristics for multi-objective optimization using Paradiseo-MOEO through a simple example.
<ul><li><strong>Metaheuristics for Multi-objective Optimization</strong> [pdf] by E.-G. Talbi and the <em class="logo">Paradis<span class="logo_eo">eo</span></em> group: presents multi-objective optimization concepts, a taxonomy of resolution methods and gives performance evaluation examples. [No longer available online]
</li><li><strong>Reusable Design of Metaheuristics for Multi-objective Optimization</strong> [pdf] by E.-G. Talbi and the <em class="logo">Paradis<span class="logo_eo">eo</span></em> group: explains how to implement metaheuristics for multi-objective optimization using Paradiseo-MOEO through a simple example. [No longer available online]
</li></ul>
<!-- <h3>Paradiseo-PEO</h3> -->
@ -1068,30 +1069,32 @@ undiscovered knowledge.
<h3>Tutorials on EO (evolutionary algorithms module)</h3>
<ul><li><a href='http://eodev.sourceforge.net/eo/tutorial/html/eoTutorial.html'>EO Lesson1-5</a> Implement a GA
</li><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoEOLesson6part1'>EO Lesson6 first part</a> Implement a real PSO algorithm
</li><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoEOLesson6part2'>EO Lesson6 second part</a> Implement a binary PSO algorithm
<ul><li><a href='https://github.com/nojhan/paradiseo/blob/master/eo/tutorial/html/eoTutorial.html'>EO Lessons 1–5</a> Implement a GA (also available locally in <code>eo/tutorial/html/</code>)
</li><li><a href='https://github.com/nojhan/paradiseo/tree/master/eo/tutorial/Lesson6'>EO Lesson 6</a> Implement real and binary PSO algorithms (see <code>RealPSO.cpp</code> and <code>BinaryPSO.cpp</code>)
</li></ul>
<h3>Tutorials on MO (local search module)</h3>
</p><ul><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoMOLesson1'>MO Lesson1</a> Hill Climber
</li><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoMOLesson2'>MO Lesson2</a> Neighborhoods (classical and indexed)
</li><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoMOLesson3'>MO Lesson3</a> Simulated Annealing and Checkpointing
</li><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoMOLesson4'>MO Lesson4</a> Tabu Search
</li><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoMOLesson5'>MO Lesson5</a> Iterated Local Search
</li><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoMOLesson6'>MO Lesson6</a> Fitness Landscapes Analysis
</li><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoMOLesson7'>MO Lesson7</a> Hybrid Lesson
</p><ul><li><a href='https://github.com/nojhan/paradiseo/tree/master/mo/tutorial/Lesson1'>MO Lesson 1</a> Hill Climber
</li><li><a href='https://github.com/nojhan/paradiseo/tree/master/mo/tutorial/Lesson2'>MO Lesson 2</a> Neighborhoods (classical and indexed)
</li><li><a href='https://github.com/nojhan/paradiseo/tree/master/mo/tutorial/Lesson3'>MO Lesson 3</a> Simulated Annealing and Checkpointing
</li><li><a href='https://github.com/nojhan/paradiseo/tree/master/mo/tutorial/Lesson4'>MO Lesson 4</a> Tabu Search
</li><li><a href='https://github.com/nojhan/paradiseo/tree/master/mo/tutorial/Lesson5'>MO Lesson 5</a> Iterated Local Search
</li><li><a href='https://github.com/nojhan/paradiseo/tree/master/mo/tutorial/Lesson6'>MO Lesson 6</a> Fitness Landscapes Analysis
</li><li><a href='https://github.com/nojhan/paradiseo/tree/master/mo/tutorial/Lesson7'>MO Lesson 7</a> Hybrid Lesson
</li></ul>
<h3>Tutorials on MOEO (multi-objective module)</h3>
</p><ul><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoMOEOLesson1'>MOEO Lesson1</a> Implement NSGA, NSGA-II and IBEA for the SCH1 problem
</li><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoMOEOLesson2'>MOEO Lesson2</a> Evolutionary Algorithms for the flow-shop scheduling problem
</li><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoMOEOLesson3'>MOEO Lesson3</a> Evolutionary Algorithms with a user-friendly parameter file
</li><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoMOEOLesson4'>MOEO Lesson4</a> Dominance-based Local Search for the flow-shop scheduling problem
</li></ul><p>Tutorials SMP: <span style='color: red;'> new</span>
</p><ul><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoSMPLesson1'>SMP Lesson1</a> Algorithm wrapping with Master / Workers model
</p><ul><li><a href='https://github.com/nojhan/paradiseo/tree/master/moeo/tutorial/Lesson1'>MOEO Lesson 1</a> Implement NSGA, NSGA-II and IBEA for the SCH1 problem
</li><li><a href='https://github.com/nojhan/paradiseo/tree/master/moeo/tutorial/Lesson2'>MOEO Lesson 2</a> Evolutionary Algorithms for the flow-shop scheduling problem
</li><li><a href='https://github.com/nojhan/paradiseo/tree/master/moeo/tutorial/Lesson3'>MOEO Lesson 3</a> Evolutionary Algorithms with a user-friendly parameter file
</li><li><a href='https://github.com/nojhan/paradiseo/tree/master/moeo/tutorial/Lesson4'>MOEO Lesson 4</a> Dominance-based Local Search for the flow-shop scheduling problem
</li></ul><p>Tutorials SMP:
</p><ul><li><a href='https://github.com/nojhan/paradiseo/tree/master/smp/tutorial/Lesson1'>SMP Lesson 1</a> Algorithm wrapping with Master / Workers model
</li><li><a href='https://github.com/nojhan/paradiseo/tree/master/smp/tutorial/Lesson2'>SMP Lesson 2</a> Homogeneous island model
</li><li><a href='https://github.com/nojhan/paradiseo/tree/master/smp/tutorial/Lesson3'>SMP Lesson 3</a> Heterogeneous island model
</li><li><a href='https://github.com/nojhan/paradiseo/tree/master/smp/tutorial/Lesson4'>SMP Lesson 4</a> Island topology
</li></ul>
<h3>Tutorials on parallelization</h3>
@ -1104,12 +1107,8 @@ undiscovered knowledge.
<a href="https://endomorphis.me/island-model-with-paradiseo-components-and-basics-en.html">2. components and basics</a>,
<a href="https://endomorphis.me/island-model-with-paradiseo-advanced-island-model-manipulations-en.html">3. advanced island model manipulations</a>.
</li>
<li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoPEOIntro'>PEO Intro</a> Technical introduction</li>
<!-- </li><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoPEOLesson1'>PEO Lesson1</a> Multistart over a MO, Packing and Unpacking (use old-mo) -->
<li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoPEOLesson2'>PEO Lesson2</a> Multistart over an evolutionary algorithm</li>
<li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoPEOLesson3'>PEO Lesson3</a> Parallel evaluation </li>
<!-- </li><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoPEOLesson4'>PEO Lesson4</a> Parallel transformation (use old-mo) -->
<li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoPEOLesson5'>PEO Lesson5</a> Island model</li>
<!-- PEO tutorials are no longer available — the PEO module has been removed from ParadisEO.
See the SMP module tutorials above for current parallelization features. -->
<!-- </li><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoPEOLesson6'>PEO Lesson6</a> Hybridization (use old-mo) -->
<!-- </li></ul><p><span style='display: none;'>GPU tutorials: </span> -->
<!-- <span style='display: none;'>*<a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoGPULesson1'>GPU Lesson1</a> CUDA installation and configuration</span> -->
@ -1124,9 +1123,9 @@ undiscovered knowledge.
<h3>Utilities</h3>
</p><ul><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoUtilsParamFiles'>Utils Lesson1</a> Using configuration files
</li><li><a href='http://paradiseo.gforge.inria.fr/index.php?n=Doc.TutoUtilsStats'>Utils Lesson2</a> Using statistics
</li></ul>
<!-- Utils tutorials were hosted on the GForge wiki only and are no longer available online.
See eo/src/utils/ for parameter file and statistics source code. -->
</div>
<div id="API">
@ -1134,16 +1133,7 @@ undiscovered knowledge.
<p>The heart of <em class="logo">Paradis<span class="logo_eo">eo</span></em> is a set of classes implementing operators. Each module has a separate API documentation. If you want to browse the features and find which class to use, this is the right entry point</p>
<p>For your convenience, you can browse an online API doc for <em class="logo">Paradis<span class="logo_eo">eo</span></em> version 2.0:
<ul>
<li><a href='http://paradiseo.gforge.inria.fr/addon/eo/doc/index.html'>doc-eo</a> (includes doc on EO, PSO and EDO)</li>
<li><a href='http://paradiseo.gforge.inria.fr/addon/mo/doc/index.html'>doc-mo</a> </li>
<li><a href='http://paradiseo.gforge.inria.fr/addon/moeo/doc/index.html'>doc-moeo</a> </li>
<li><a href='http://paradiseo.gforge.inria.fr/addon/smp/doc/index.html'>doc-smp</a> </li>
</ul>
</p>
<p>Note that if you want to find the API documentation for the version you have at hand, just build the <code class="command">make doc</code> target and open <code>paradiseo/&lt;build&gt;/&lt;module&gt;/doc/html/index.html</code> in your web browser.</p>
<p>The previously hosted online API docs (v2.0) are no longer available. To generate the API documentation for your version, build the <code class="command">make doc</code> target and open <code>paradiseo/&lt;build&gt;/&lt;module&gt;/doc/html/index.html</code> in your web browser. Per-module targets are also available: <code>make doc-eo</code>, <code>make doc-mo</code>, <code>make doc-moeo</code>, <code>make doc-smp</code>, <code>make doc-edo</code>.</p>
</div>
<div id="Examples">
@ -1151,9 +1141,8 @@ undiscovered knowledge.
<p>If you want to see examples of real solvers:
<ul>
<li>The <a href="http://paradiseo.gforge.inria.fr/index.php?n=Problems.Problems">examples page</a> on INRIA <em class="logo">Paradis<span class="logo_eo">eo</span></em> pages (with explanations).</li>
<li>The <a href="https://gforge.inria.fr/frs/?group_id=145">contributed code</a> on the project page.</li>
<li>The <a href="https://github.com/nojhan/descarwin">Descarwin</a> project hold the "DaE" planning solver,
<li>The <a href="https://github.com/nojhan/paradiseo/tree/master/problems">problems directory</a> in the repository contains benchmark problem implementations (DTLZ, NK landscapes, QAP, etc.).</li>
<li>The <a href="https://github.com/nojhan/descarwin">Descarwin</a> project holds the "DaE" planning solver,
which is implemented with <em class="logo">Paradis<span class="logo_eo">eo</span></em> and won the International Planning Competition.</li>
</ul>
</p>
@ -1172,7 +1161,7 @@ undiscovered knowledge.
<p>The current stable release is version: <a href="https://github.com/nojhan/paradiseo/releases">Paradiseo 3.1.3</a>. Some other releases (older or newer) can be found on <a href="https://github.com/nojhan/paradiseo/tags">GitHub/paradiseo/releases</a>.</p>
<p> You can obtain the latest stable and beta version directly via the Git repository:
<code class="command">git clone https://github.com/jdreo/paradiseo.git</code>.
<code class="command">git clone https://github.com/nojhan/paradiseo.git</code>.
The release are on the "master" branch.
</p>
@ -1205,7 +1194,7 @@ undiscovered knowledge.
</ul>
</p>
<p class="excerpt">To install all those dependencies at once under Ubuntu (18.04), just type: <em>sudo apt install g++-8 cmake make libeigen3-dev libopenmpi-dev doxygen graphviz libgnuplot-iostream-dev</em>. </p>
<p class="excerpt">To install all those dependencies at once under Ubuntu, just type: <em>sudo apt install g++ cmake make libeigen3-dev libopenmpi-dev doxygen graphviz libgnuplot-iostream-dev</em>. </p>
</div>
<div id="Compilation">
@ -1253,7 +1242,7 @@ undiscovered knowledge.
<p><em class="logo">Paradis<span class="logo_eo">eo</span></em> development is open and contributions are welcomed.</p>
<p>The official bug tracker is available on the <a href="https://github.com/nojhan/paradiseo/issues">project page</a>.</p>
<p>If you have any question about contributing: subscribe to our <a href='http://lists.gforge.inria.fr/cgi-bin/mailman/listinfo/paradiseo-users'>(low traffic) mailing-list</a>.</p>
<p>If you have any question about contributing, <a href='https://github.com/nojhan/paradiseo/issues'>open an issue</a> or join the <a href='https://app.element.io/#/room/#paradiseo:matrix.org'>Matrix chatroom</a>.</p>
</div>
</div>
@ -1289,35 +1278,26 @@ undiscovered knowledge.
<div id="Authors">
<h2><a name="Authors"></a>Authors</h2>
<p>The EO module was started in 1999 by the <a href="http://geneura.ugr.es/">Geneura
Team</a> at the University of Granada, headed by <a
href="http://geneura.ugr.es/%7Ejmerelo/">Juan Julián Merelo</a>. The <a
href="http://geneura.ugr.es/~jmerelo/EO.orig.html"
>original Web site</a> is also the only place where you
will find old releases of <em class="logo">Paradis<span class="logo_eo">eo</span></em> (up to 0.8.7), but beware that it is not
compatible at all with the current version. </p>
<p>The EO module was started in 1999 by the Geneura
Team at the University of Granada, headed by
Juan Julián Merelo. </p>
<p>You can read this <a href="http://geneura.ugr.es/~jmerelo/GAPPT/index.html">
PowerPoint presentation</a>, that shows the EO philosophy back then.
It includes a Visual Basic (!) macro for evolving objects in Visual Basic
for Applications.</p>
<p>The developement team has then been reinforced by <a
href="http://www.cs.vu.nl/~mkeijzer">Maarten Keijzer</a>, the C++
<p>The developement team has then been reinforced by
Maarten Keijzer (the C++
wizard who designed the current neat architecture),
and <a href="http://www.lri.fr/%7Emarc">Marc Schoenauer</a>
and Marc Schoenauer
(who became a prominent researcher in the evolutionary algorithm community).
Later came <a href="http://www.liacs.nl/%7Ejeggermo/">Jeroen Eggermont</a>,
Later came Jeroen Eggermont,
who, among other things, did a lot of work on GP,
INRIA Dolphin Team, Olivier König, who did a
lot of useful additions and cleaning of the code
and <a href="http://www.jochen-kuepper.de">Jochen Küpper</a>, working on
and <a href="https://www.jochen-kuepper.de">Jochen Küpper</a>, working on
infrastructure maintenance. </p>
<p><a href="https://www.lifl.fr/~talbi/">El-Ghazali Talbi</a>'s
<p>El-Ghazali Talbi's
INRIA team did a lot of contributions starting from around 2003,
on their own module collection called <em class="logo">Paradis<span class="logo_eo">eo</span></em>.
Thomas Legrand, Sébastien Cahon and <a href="https://www.lifl.fr/~melab">Nouredine Melab</a>
Thomas Legrand, Sébastien Cahon and Nouredine Melab
worked on parallelization modules.
<a href="https://sites.google.com/site/arnaudliefooghe/">Arnaud Liefooghe</a>
worked a lot on the multi-objective module and
@ -1326,7 +1306,7 @@ undiscovered knowledge.
In the same team, C. C. and J. Boisson made significant contributions.
Karima Boufaras specifically worked on (now deprecated) GPU tools.</p>
<p>The (then) EO project was then taken over by <a href="http://johann.dreo.fr">Johann Dreo</a>,
<p>The (then) EO project was then taken over by <a href="https://johann.dreo.fr">Johann Dreo</a>,
who worked with the help of Caner Candan on adding the EDO module.
Johann and <a href="https://github.com/bnjbvr">Benjamin Bouvier</a> have also designed a
MPI parallelization module. <a href="https://aquemy.info/">Alexandre Quemy</a>
@ -1346,14 +1326,13 @@ undiscovered knowledge.
<p>Some softwares listed here are using <em class="logo">Paradis<span class="logo_eo">eo</span></em>, but they are not maintained by the <em class="logo">Paradis<span class="logo_eo">eo</span></em> team.
They may not be free softwares.</p>
<p><ul>
<li> <a href="http://geneura.ugr.es/~jmerelo/DegaX/">DegaX</a>
is an ActiveX control which embeds <em class="logo">Paradis<span class="logo_eo">eo</span></em> 0.8.4.
<li> DegaX was an ActiveX control which embedded <em class="logo">Paradis<span class="logo_eo">eo</span></em> 0.8.4.
</li>
<li><a href="https://lsiit.u-strasbg.fr/easea/index.php/EASEA_platform">EASEA</a> was a GUI that permits to build evolutionary algorithm with <em class="logo">Paradis<span class="logo_eo">eo</span></em> or the <a href="http://lancet.mit.edu/ga/">GAlib</a>.
It is now a platform that allows program evolutionary algorithms on massively parallel many-core architectures.</li>
<li>EASEA was a GUI that permits to build evolutionary algorithm with <em class="logo">Paradis<span class="logo_eo">eo</span></em> or GAlib.
It became a platform that allows programming evolutionary algorithms on massively parallel many-core architectures.</li>
<li><a href="https://gforge.inria.fr/projects/guide">GUIDE</a> is a GUI that allows the generation of evolutionary algorithms. It can use <em class="logo">Paradis<span class="logo_eo">eo</span></em> or <a href="http://cs.gmu.edu/~eclab/projects/ecj/">ECJ</a>.</li>
<li>GUIDE was a GUI that allows the generation of evolutionary algorithms. It could use <em class="logo">Paradis<span class="logo_eo">eo</span></em> or <a href="https://cs.gmu.edu/~eclab/projects/ecj/">ECJ</a>.</li>
</ul>
</p>
</div>

10
edo/README
View file

@ -9,7 +9,7 @@ On Windows write your path with double antislash (ex: C:\\Users\\...)
# Step 2 - Build process
------------------------
ParadisEO is assumed to be compiled. To download ParadisEO, please visit http://paradiseo.gforge.inria.fr/.
ParadisEO is assumed to be compiled. To download ParadisEO, please visit https://nojhan.github.io/paradiseo/.
Go to the DO/build/ directory and lunch cmake:
(Unix) > cmake ..
(Windows) > cmake .. -G"Visual Studio 9 2008"
@ -22,23 +22,23 @@ Note for windows users: if you don't use VisualStudio 9, enter the name of your
In the edo/build/ directory:
(Unix) > make
(Windows) Open the VisualStudio solution and compile it, compile also the target install.
You can refer to this tutorial if you don't know how to compile a solution: http://paradiseo.gforge.inria.fr/index.php?n=Paradiseo.VisualCTutorial
You can refer to this tutorial if you don't know how to compile a solution: https://nojhan.github.io/paradiseo/index.php?n=Paradiseo.VisualCTutorial
# Step 4 - Execution
---------------------
A toy example is given to test the components. You can run these tests as following.
To define problem-related components for your own problem, please refer to the tutorials available on the website : http://paradiseo.gforge.inria.fr/.
To define problem-related components for your own problem, please refer to the tutorials available on the website : https://nojhan.github.io/paradiseo/.
In the edo/build/ directory:
(Unix) > ctest
Windows users, please refer to this tutorial: http://paradiseo.gforge.inria.fr/index.php?n=Paradiseo.VisualCTutorial
Windows users, please refer to this tutorial: https://nojhan.github.io/paradiseo/index.php?n=Paradiseo.VisualCTutorial
In the directory "application", there are several directory such as eda which instantiate EDA solver.
(Unix) After compilation you can run the binary "build/eda" and see results. Parameters can be modified from command line.
(Windows) Add argument "eda.param" and execute the corresponding algorithms.
Windows users, please refer to this tutorial: http://paradiseo.gforge.inria.fr/index.php?n=Paradiseo.VisualCTutorial
Windows users, please refer to this tutorial: https://nojhan.github.io/paradiseo/index.php?n=Paradiseo.VisualCTutorial
# Documentation

4
eo/README
View file

@ -1,13 +1,13 @@
EO README FILE
=======================================================================
check latest news at http://eodev.sourceforge.net/
check latest news at https://nojhan.github.io/paradiseo/
=======================================================================
Welcome to EO, the Evolving Objects library.
The latest news about EO can be found on the sourceforge repository at
http://eodev.sourceforge.net/
https://nojhan.github.io/paradiseo/
In case of any problem, please e-mail us at
eodev-main@lists.sourceforge.net

6
eo/doc/index.h
View file

@ -56,7 +56,7 @@ Thus, you can easily build your own algorithm by trying several combination of o
For a more detailled introduction to the design of %EO you can look at the
slides from a talk at EA 2001 or at the corresponding
article in Lecture Notes In Computer Science, 2310, Selected Papers from the 5th European Conference on Artificial Evolution:
- http://portal.acm.org/citation.cfm?id=727742
- http://eodev.sourceforge.net/eo/doc/LeCreusot.pdf
- http://eodev.sourceforge.net/eo/doc/EO_EA2001.pdf
- https://doi.org/10.1007/3-540-46033-0_13
- LeCreusot.pdf (available in eo/doc/)
- EO_EA2001.pdf (available in eo/doc/)
*/

139
eo/doc/mainpage.html
View file

@ -35,23 +35,18 @@ background: #00309c;
in it, it is very easy to subclass existing abstract or concrete
classes. </p>
<p> EO was started by the <a href="http://geneura.ugr.es/">Geneura
Team</a> at the University of Granada, headed by <a
href="http://geneura.ugr.es/%7Ejmerelo/">Juan Julián Merelo</a>. The <a
href="http://geneura.ugr.es/~jmerelo/EO.orig.html"
target="_blank">original Web site</a> is also the only place where you
will find old releases of EO (up to 0.8.7), but beware that it is not
compatible at all with the current version. </p>
<p> EO was started by the Geneura
Team at the University of Granada, headed by
Juan Juli&aacute;n Merelo. </p>
<p> The developement team has then been reinforced by <a
href="http://www.cs.vu.nl/~mkeijzer">Maarten Keijzer</a>, the C++
wizzard, and <a href="http://www.lri.fr/%7Emarc">Marc Schoenauer</a>.
Later came <a href="http://www.liacs.nl/%7Ejeggermo/">Jeroen
Eggermont</a>, who, among other things, did a lot of work on GP,
INRIA Dolphin Team, <a
href="mailto:okoenig@users.sourceforge.net">Olivier König</a>, who did a
<p> The developement team has then been reinforced by
Maarten Keijzer (the C++
wizard), and Marc Schoenauer.
Later came Jeroen
Eggermont, who, among other things, did a lot of work on GP,
INRIA Dolphin Team, Olivier K&ouml;nig, who did a
lot of useful additions and cleaning of the code and <a
href="http://www.jochen-kuepper.de">Jochen Küpper</a>, working on
href="https://www.jochen-kuepper.de">Jochen K&uuml;pper</a>, working on
infrastructure maintenance. </p>
</td>
@ -81,7 +76,7 @@ background: #00309c;
</ul>
<p> If you have tested EO on a system not listed here, please <a
href="mailto:eodev-main@lists.sourceforge.net?subject=test-report">let
href="https://github.com/nojhan/paradiseo/issues">let
us know</a>. </p>
<p> If you are working on a system with an older C++ compiler there
@ -98,26 +93,11 @@ background: #00309c;
<p>The tutorial demonstrates that writing an evolutionary algorithm
evolving your own structures is now <em>easy</em>, using ready-to-use
template files. Although the tutorial has not been upgraded for some
time now and refers to version 0.9.2 of EO, it nevertheless remains the
best way to dive into EO. You can start by trying it on-line at <a
href="http://www.lri.fr/%7Emarc/EO/eo/tutorial/html/eoTutorial.html">LRI</a>
or <a
href="http://eodev.sourceforge.net/eo/tutorial/html/eoTutorial.html">SourceForge</a>,
before <a href="http://www.lri.fr/%7Emarc/EO/">downloading it</a>. The
tutorial is also included in the <a
href="http://sourceforge.net/project/showfiles.php?group_id=9775">released
sources</a>. </p>
template files. The tutorial is included in the source tree at
<a href="https://github.com/nojhan/paradiseo/tree/master/eo/tutorial">eo/tutorial/</a>. </p>
<p>The latest <a
href="http://eodev.sourceforge.net/eo/tutorial/html/eoTutorial.html">tutorial
release</a>
</p>
<p>The complete code is also well documented and you can look at the
generated <a
href="http://eodev.sourceforge.net/eo/doc/html/index.html">interface
documentation</a>. </p>
<p>The complete code is also well documented and you can generate the
API documentation locally with <code>make doc-eo</code>. </p>
<p>The easiest way to create a complete new EO-project, even for new
genomes, is to use the script provided in tutorial/Templates/; see
@ -132,17 +112,9 @@ background: #00309c;
</td>
<td bgcolor="#ffcc99">
<p> A functional and "philosophical" overview of EO was presented at <a
href="http://www.cmap.polytechnique.fr/%7Eea01/">EA'01 conference</a>.
You can download <a
href="http://eodev.sourceforge.net/eo/doc/EO_EA2001.pdf">the paper</a>
or <a href="http://eodev.sourceforge.net/eo/doc/LeCreusot.pdf">the
slides</a>. </p>
<p> A <a href="http://geneura.ugr.es/~jmerelo/GAPPT/index.html"
target="_blank">PowerPoint presentation</a> shows the EO philosophy, and
it includes a Visual Basic macro for evolving objects in Visual Basic
for Applications. </p>
<p> A functional and "philosophical" overview of EO was presented at EA'01 conference.
You can find the paper (<code>EO_EA2001.pdf</code>)
and the slides (<code>LeCreusot.pdf</code>) in the <code>eo/doc/</code> directory. </p>
<p>You can also look a the <a href="publications.html">list of
publications</a> that used EO to solve real problems. </p>
@ -155,18 +127,14 @@ background: #00309c;
</td>
<td bgcolor="#ffcc99">
<p> The current release is <a
href="http://sourceforge.net/project/showfiles.php?group_id=9775">EO 1.0</a>.
It supports any Standard-compliant C++ compiler. </p>
<p> EO is now part of <a
href="https://github.com/nojhan/paradiseo">ParadisEO</a>.
You can obtain the latest version via Git:
<code>git clone https://github.com/nojhan/paradiseo.git</code> </p>
<p> You can obtain the latest version directly via <a
href="http://sourceforge.net/cvs/?group_id=9775">cvs</a> or download a
daily snapshot from <a
href="http://www.lri.fr/%7Emarc/EO/snapshot">LRI</a>. </p>
<p> All releases can be obtained from the SourceForge <a
href="http://sourceforge.net/project/showfiles.php?group_id=9775">download
area</a>. </p>
<p> Releases can be obtained from the <a
href="https://github.com/nojhan/paradiseo/releases">GitHub releases
page</a>. </p>
</td>
</tr>
@ -176,11 +144,9 @@ background: #00309c;
</td>
<td bgcolor="#ffcc99">
We would like EO to be an open development effort; that is why we have
created mailing lists to discuss future developments, solve technical
problems, announce releases, publish patches, and discuss evolutionary
computation in general. Browse the archives or join the <a
href="http://sourceforge.net/mail/?group_id=9775">EO mailing lists</a>.
For questions, bug reports, or contributions, please use the
<a href="https://github.com/nojhan/paradiseo/issues">GitHub issue tracker</a>
or the <a href="https://app.element.io/#/room/#paradiseo:matrix.org">Matrix chatroom</a>.
</td>
</tr>
@ -190,23 +156,11 @@ background: #00309c;
</td>
<td bgcolor="#ffcc99">
<p>The following resources are available, thanks to sourceforge</p>
<p>EO is now developed as part of ParadisEO on GitHub:</p>
<ul>
<li> <a href="http://sourceforge.net/project/?group_id=9775">EO
SourceForge Project Page</a></li>
<li><a href="http://eodev.sourceforge.net/eo/doc/html/index.html">EO
automatic documentation page at SF</a><br>
</li>
<li><a href="http://eodev.sourceforge.net/eo/tutorial/html/eoTutorial.html">EO
tutorial page at SF</a><br>
</li>
<li> <a href="https://sourceforge.net/project/showfiles.php?group_id=9775">Releases</a></li>
<li> <a href="http://sourceforge.net/mail/?group_id=9775">Mailing Lists</a></li>
<li> <a href="http://sourceforge.net/forum/?group_id=9775">Message Forums</a></li>
<li> <a href="http://sourceforge.net/bugs/?group_id=9775">Bug Submission and Tracking</a></li>
<li> <a href="http://sourceforge.net/support/?group_id=9775">Technical Support</a></li>
<li> <a href="http://sourceforge.net/patch/?group_id=9775">Patch Submission</a></li>
<li> <a href="http://sourceforge.net/cvs/?group_id=9775">CVS repository</a></li>
<li> <a href="https://github.com/nojhan/paradiseo">ParadisEO GitHub repository</a></li>
<li> <a href="https://github.com/nojhan/paradiseo/issues">Issue tracker</a></li>
<li> <a href="https://github.com/nojhan/paradiseo/releases">Releases</a></li>
</ul>
</td>
</tr>
@ -226,16 +180,11 @@ background: #00309c;
</td>
<td bgcolor="#ffcc99">
<p> <a href="http://paradiseo.gforge.inria.fr"
target="_blank">ParadisEO</a> provides EO extensions for
<p> <a href="https://nojhan.github.io/paradiseo/">ParadisEO</a> provides EO extensions for
the flexible design of <b>single solution-based metaheuristics</b>,
metaheuristics for <b>multi objective optimization</b> as well as <b>hybrid, parallel and distributed
metaheuristics</b>.</p>
<p> <a href="http://geneura.ugr.es/~jmerelo/DegaX/"
target="_blank">DegaX</a> is an ActiveX control which embeds EO 0.8.4.
</p>
</td>
</tr>
<tr>
@ -245,30 +194,20 @@ background: #00309c;
<td bgcolor="#ffcc99">
<ul>
<li><a href="http://www.aip.de/~ast/EvolCompFAQ" target="_blank">The
Hitch-Hiker's Guide to Evolutionary Computation</a>, FAQ for
<a href="news:comp.ai.genetic">comp.ai.genetic</a>.</li>
<li><a href="http://en.wikipedia.org/wiki/Evolutionary_algorithm" target="_blank">Wikipedia</a>
<li><a href="https://en.wikipedia.org/wiki/Evolutionary_algorithm" target="_blank">Wikipedia</a>
on Evolutionary algorithms.</li>
<li>Charles Darwin: <a href="http://en.wikipedia.org/wiki/The_Origin_of_Species" target="_blank">The
<li>Charles Darwin: <a href="https://en.wikipedia.org/wiki/The_Origin_of_Species" target="_blank">The
Origin of Species</a>.</li>
<li>Nikolaus Hansen: <a
href="http://www.bionik.tu-berlin.de/user/niko/cec2005.html" target="_blank">Comparison
of Evolutionary Algorithms on a Benchmark Function Set</a>.</li>
<li><a href="https://cma-es.github.io/" target="_blank">CMA-ES</a>:
Covariance Matrix Adaptation Evolution Strategy.</li>
</ul>
</td>
</tr>
</tbody>
</table>
<center> <p> Hosted by:<br/><a href="http://sourceforge.net/"><img alt="SF logo"
src="http://eodev.sourceforge.net/eo/doc/sflogo-hammer1.jpg"></a> </p> </center>
<p> <a href="http://validator.w3.org/check?uri=referer"> <img
src="http://www.w3.org/Icons/valid-html401" alt="Valid HTML 4.01 Transitional"
height="31" width="88"></a> <br/> Please send comments on this webpage to the <a
href="mailto:eodev-main@lists.sourceforge.net?subject=webpage">EO mailing
list</a>. </p>
<p>Please report issues on the <a
href="https://github.com/nojhan/paradiseo/issues">GitHub issue tracker</a>. </p>
</body>
</html>

2
eo/doc/publications.html
View file

@ -50,7 +50,7 @@
<center>
<p>
Hosted by:<br/><a href="http://sourceforge.net/"><img alt="SF logo"
src="http://eodev.sourceforge.net/eo/doc/sflogo-hammer1.jpg"></a>
src="sflogo-hammer1.jpg"></a>
</p>
</center>
<p>

2
eo/src/eoDualFitness.h
View file

@ -16,7 +16,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Johann Dréo <johann.dreo@thalesgroup.com>

2
eo/src/eoEvalCmd.h
View file

@ -15,7 +15,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Johann Dréo <johann.dreo@thalesgroup.com>

2
eo/src/eoEvalCounterThrowException.h
View file

@ -15,7 +15,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Johann Dréo <johann.dreo@thalesgroup.com>

2
eo/src/eoEvalNamedPipe.h
View file

@ -15,7 +15,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Johann Dréo <johann.dreo@thalesgroup.com>

2
eo/src/eoEvalNanThrowException.h
View file

@ -15,7 +15,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Johann Dréo <johann.dreo@thalesgroup.com>

2
eo/src/eoEvalTimeThrowException.h
View file

@ -15,7 +15,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Johann Dréo <johann.dreo@thalesgroup.com>

2
eo/src/eoEvalUserTimeThrowException.h
View file

@ -15,7 +15,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Johann Dréo <johann.dreo@thalesgroup.com>

2
eo/src/eoExceptions.h
View file

@ -15,7 +15,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Johann Dréo <johann.dreo@thalesgroup.com>

4
eo/src/eoInvertedContinue.h
View file

@ -23,8 +23,8 @@ same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _eoInvertedContinue_h

4
eo/src/eoPartiallyMappedXover.h
View file

@ -23,8 +23,8 @@
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef eoPartiallyMappedXover__h
#define eoPartiallyMappedXover__h

2
eo/src/es/eoEsChromInit.h
View file

@ -14,7 +14,7 @@ You should have received a copy of the GNU Lesser General Public License along
with this library; if not, write to the Free Software Foundation, Inc., 59
Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
todos@geneura.ugr.es, http://geneura.ugr.es
Marc.Schoenauer@polytechnique.fr
mak@dhi.dk

2
eo/src/es/eoEsSimple.h
View file

@ -13,7 +13,7 @@ You should have received a copy of the GNU Lesser General Public License along
with this library; if not, write to the Free Software Foundation, Inc., 59
Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
todos@geneura.ugr.es, http://geneura.ugr.es
Marc.Schoenauer@polytechnique.fr
mak@dhi.dk

2
eo/src/es/eoEsStdev.h
View file

@ -13,7 +13,7 @@ You should have received a copy of the GNU Lesser General Public License along
with this library; if not, write to the Free Software Foundation, Inc., 59
Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
todos@geneura.ugr.es, http://geneura.ugr.es
Marc.Schoenauer@polytechnique.fr
mak@dhi.dk

2
eo/src/es/make_genotype_es.cpp
View file

@ -13,7 +13,7 @@ You should have received a copy of the GNU Lesser General Public License along
with this library; if not, write to the Free Software Foundation, Inc., 59
Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
todos@geneura.ugr.es, http://geneura.ugr.es
Marc.Schoenauer@polytechnique.fr
mkeijzer@dhi.dk

2
eo/src/es/make_genotype_real.h
View file

@ -14,7 +14,7 @@ You should have received a copy of the GNU Lesser General Public License along
with this library; if not, write to the Free Software Foundation, Inc., 59
Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
todos@geneura.ugr.es, http://geneura.ugr.es
Marc.Schoenauer@polytechnique.fr
mkeijzer@dhi.dk

2
eo/src/es/make_op_es.h
View file

@ -13,7 +13,7 @@ You should have received a copy of the GNU Lesser General Public License along
with this library; if not, write to the Free Software Foundation, Inc., 59
Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
todos@geneura.ugr.es, http://geneura.ugr.es
Marc.Schoenauer@polytechnique.fr
mkeijzer@dhi.dk

2
eo/src/mpi/eoMpi.cpp
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/mpi/eoMpi.h
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/mpi/eoMpiAssignmentAlgorithm.cpp
View file

@ -15,7 +15,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/mpi/eoMpiAssignmentAlgorithm.h
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/mpi/eoMpiNode.cpp
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/mpi/eoMpiNode.h
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/mpi/eoParallelApply.h
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/mpi/eoTerminateJob.h
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/mpi/implMpi.cpp
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/mpi/implMpi.h
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/serial/Entity.h
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/serial/Parser.cpp
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/serial/Parser.h
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/serial/SerialArray.cpp
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/serial/SerialArray.h
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/serial/SerialObject.cpp
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/serial/SerialObject.h
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/serial/SerialString.cpp
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/serial/SerialString.h
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/serial/Serializable.h
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/serial/Traits.h
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/serial/Utils.h
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/serial/eoSerial.h
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/src/utils/eoFeasibleRatioStat.h
View file

@ -16,7 +16,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Johann Dréo <johann.dreo@thalesgroup.com>

2
eo/src/utils/eoHowMany.h
View file

@ -21,7 +21,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
*/
//-----------------------------------------------------------------------------

2
eo/src/utils/eoLogMessage.h
View file

@ -13,7 +13,7 @@
with this library; if not, write to the Free Software Foundation, Inc., 59
Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Johann Dréo <johann.dreo@thalesgroup.com>

2
eo/src/utils/eoLogMonitor.h
View file

@ -15,7 +15,7 @@
with this library; if not, write to the Free Software Foundation, Inc., 59
Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Johann Dréo <johann.dreo@thalesgroup.com>

2
eo/src/utils/eoLogger.cpp
View file

@ -18,7 +18,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Johann Dréo <johann.dreo@thalesgroup.com>

2
eo/src/utils/eoLogger.h
View file

@ -17,7 +17,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Johann Dréo <johann.dreo@thalesgroup.com>

2
eo/src/utils/eoOStreamMonitor.h
View file

@ -15,7 +15,7 @@
with this library; if not, write to the Free Software Foundation, Inc., 59
Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
todos@geneura.ugr.es

2
eo/src/utils/eoParallel.cpp
View file

@ -18,7 +18,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Caner Candan <caner.candan@thalesgroup.com>

2
eo/src/utils/eoParallel.h
View file

@ -17,7 +17,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Caner Candan <caner.candan@thalesgroup.com>

2
eo/src/utils/eoParser.cpp
View file

@ -18,7 +18,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
todos@geneura.ugr.es, http://geneura.ugr.es
Marc.Schoenauer@polytechnique.fr

2
eo/src/utils/eoParser.h
View file

@ -13,7 +13,7 @@ You should have received a copy of the GNU Lesser General Public License along
with this library; if not, write to the Free Software Foundation, Inc., 59
Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
todos@geneura.ugr.es, http://geneura.ugr.es
Marc.Schoenauer@polytechnique.fr

2
eo/src/utils/eoSignal.cpp
View file

@ -15,7 +15,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Autors: todos@geneura.ugr.es, http://geneura.ugr.es
Marc.Schoenauer@polytechnique.fr

2
eo/src/utils/eoSignal.h
View file

@ -15,7 +15,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors: todos@geneura.ugr.es, http://geneura.ugr.es
Marc.Schoenauer@polytechnique.fr

2
eo/src/utils/eoStat.h
View file

@ -19,7 +19,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
todos@geneura.ugr.es, http://geneura.ugr.es

2
eo/src/utils/eoStdoutMonitor.h
View file

@ -18,7 +18,7 @@
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
todos@geneura.ugr.es

2
eo/src/utils/eoTimer.h
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/test/mpi/t-mpi-eval.cpp
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/test/mpi/t-mpi-multipleRoles.cpp
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/test/mpi/t-mpi-parallelApply.cpp
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/test/mpi/t-mpi-wrapper.cpp
View file

@ -14,7 +14,7 @@
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Benjamin Bouvier <benjamin.bouvier@gmail.com>

2
eo/test/t-openmp.cpp
View file

@ -17,7 +17,7 @@
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
Contact: http://eodev.sourceforge.net
Contact: https://nojhan.github.io/paradiseo
Authors:
Caner Candan <caner.candan@thalesgroup.com>

2
eo/test/t-openmp.py
View file

@ -17,7 +17,7 @@
# License along with this library; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
#
# Contact: http://eodev.sourceforge.net
# Contact: https://nojhan.github.io/paradiseo
#
# Authors:
# Caner Candan <caner.candan@thalesgroup.com>

19
eo/tutorial/html/eoTutorial.html
View file

@ -31,8 +31,7 @@ but go to the <font color="#FF6666"><b>test</b></font> directory, type
<font color="#FF6600"><b>make t-eoCMAES</b></font> and use the resulting <font
color="#FF6666"><b>t-eoCMAES</b></font>. But as of today,
the latest algorithms (and comparative results)
are better found on <a href="http://www.bionik.tu-berlin.de/user/niko/">Nikolaus Hansen Web page</a>
and on his <a href="http://www.bionik.tu-berlin.de/user/niko/cec2005.html">"Comparison of Evolutionary Algorithms on a Benchmark Function Set" page</a>).<br>
are better found on the <a href="https://cma-es.github.io/">CMA-ES project page</a>.<br>
<br>
<br>
@ -92,8 +91,8 @@ html-ized code are not yet updated - time is missing
<center><font color="#FF0000">May 2002</font></center>
<li>
<center>
<font color="#000000">Thanks to <a href="mailto:paradiseo-help@lists.gforge.inria.fr">S&eacute;bastien
Cahon</a> (LIFL, Lille)</font></center>
<font color="#000000">Thanks to S&eacute;bastien
Cahon (LIFL, Lille)</font></center>
</ul>
<hr WIDTH="100%">
@ -142,14 +141,12 @@ and to quickly reach some specific part of the code.</li>
diagram of the class, and you'll learn a lot by simply looking at it.
<li>
For those who wish to get deeper in STL (Standard Template Library), you
might visit the well documented <a href="http://www.sgi.com/Technology/STL/">SGI
STL Web site</a>. But don't forget you'll find the very basic minimum in
might visit <a href="https://en.cppreference.com/w/cpp/container.html">cppreference.com</a>. But don't forget you'll find the very basic minimum in
EO <a href="eoProgramming.html#STL">programming hints</a>.</li>
<li>
And, last but not least, we assume you know approximately that an Evolutionary
Algorithm looks like this, but otherwise you can try this <a href="eoIntroEA.html">very
brief introduction</a> (not written yet, Jan. 2001, sorry).</li>
And, last but not least, we assume you know approximately what an Evolutionary
Algorithm looks like.</li>
</ul>
<p><br>
@ -233,8 +230,8 @@ rather than when you have something urgent to code :-)</li>
<hr WIDTH="100%"><a NAME="install"></a><b><font color="#000099"><font size=+1>Before
you start</font></font></b>
<p>You should of course have downloaded and installed the whole <a href="http://www.sourceforge.net/projects/eodev">EO
library</a> (how did you get this file if not???).
<p>You should of course have downloaded and installed the whole <a href="https://github.com/nojhan/paradiseo">ParadisEO
framework</a> (how did you get this file if not???).
If you are using a recent version of EO (0.9.3+), all tutorial Lessons
should have been compiled when installing the library, and you can now
proceed with <a href="eoLesson1.html">Lesson1</a>. <br>

13
mo/doc/index.h
View file

@ -6,12 +6,13 @@ ParadisEO-MO is a white-box object-oriented generic framework dedicated to the f
@section tutorials Tutorials
Tutorials for ParadisEO-MO are available in the "Tutorials section" of the <a href="http://paradiseo.gforge.inria.fr">ParadisEO website</a>.
Tutorials for ParadisEO-MO are available in the mo/tutorial/ directory. See also the
<a href="https://nojhan.github.io/paradiseo/">ParadisEO website</a>.
@section Design
For an introduction to the design of ParadisEO-MO,
you can look at the <a href="http://paradiseo.gforge.inria.fr">ParadisEO website</a>.
you can look at the <a href="https://nojhan.github.io/paradiseo/">ParadisEO website</a>.
@section LICENSE
@ -39,14 +40,14 @@ you can look at the <a href="http://paradiseo.gforge.inria.fr">ParadisEO website
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
/** @page webpages Related webpages
- ParadisEO <a href="http://paradiseo.gforge.inria.fr">homepage</a>
- INRIA GForge <a href="http://gforge.inria.fr/projects/paradiseo/">project page</a>
- ParadisEO <a href="https://nojhan.github.io/paradiseo/">homepage</a>
- GitHub <a href="https://github.com/nojhan/paradiseo">project page</a>
- <a href="../../README">README</a>
*/

2
mo/doc/mo.doxyfile.cmake
View file

@ -1295,7 +1295,7 @@ SKIP_FUNCTION_MACROS = YES
# If a tag file is not located in the directory in which doxygen
# is run, you must also specify the path to the tagfile here.
TAGFILES = @EO_BIN_DIR@/doc/eo.doxytag=http://eodev.sourceforge.net/eo/doc/html
TAGFILES = @EO_BIN_DIR@/doc/eo.doxytag=https://nojhan.github.io/paradiseo/eo/doc/html
# When a file name is specified after GENERATE_TAGFILE, doxygen will create
# a tag file that is based on the input files it reads.

4
mo/src/acceptCrit/moAcceptanceCriterion.h
View file

@ -23,8 +23,8 @@ same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moAcceptanceCriterion_h

4
mo/src/acceptCrit/moAlwaysAcceptCrit.h
View file

@ -23,8 +23,8 @@ same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moAlwaysAcceptCrit_h

4
mo/src/acceptCrit/moBetterAcceptCrit.h
View file

@ -23,8 +23,8 @@ same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moBetterAcceptCrit_h

4
mo/src/algo/eoDummyMonOp.h
View file

@ -28,8 +28,8 @@
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moDummyMonOp_h

4
mo/src/algo/moDummyLS.h
View file

@ -23,8 +23,8 @@ same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moDummyLS_h

4
mo/src/algo/moFirstImprHC.h
View file

@ -23,8 +23,8 @@ same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moFirstImprHC_h

4
mo/src/algo/moILS.h
View file

@ -23,8 +23,8 @@ same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moILS_h

4
mo/src/algo/moLocalSearch.h
View file

@ -28,8 +28,8 @@
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moLocalSearch_h

4
mo/src/algo/moMetropolisHasting.h
View file

@ -23,8 +23,8 @@ same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moMetropolisHasting_h

4
mo/src/algo/moNeutralHC.h
View file

@ -23,8 +23,8 @@ same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moNeutralHC_h

4
mo/src/algo/moRandomBestHC.h
View file

@ -23,8 +23,8 @@ same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moRandomBestHC_h

4
mo/src/algo/moRandomNeutralWalk.h
View file

@ -23,8 +23,8 @@ same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moRandomNeutralWalk_h

4
mo/src/algo/moRandomSearch.h
View file

@ -23,8 +23,8 @@ same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moRandomSearch_h

4
mo/src/algo/moRandomWalk.h
View file

@ -23,8 +23,8 @@ same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moRandomWalk_h

4
mo/src/algo/moSA.h
View file

@ -23,8 +23,8 @@ same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moSA_h

4
mo/src/algo/moSimpleHC.h
View file

@ -23,8 +23,8 @@ same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moSimpleHC_h

4
mo/src/algo/moTS.h
View file

@ -23,8 +23,8 @@
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moTS_h

4
mo/src/algo/moVNS.h
View file

@ -23,8 +23,8 @@
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moVNS_h

4
mo/src/comparator/moComparator.h
View file

@ -28,8 +28,8 @@
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moComparator_h

4
mo/src/comparator/moEqualNeighborComparator.h
View file

@ -28,8 +28,8 @@
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moEqualNeighborComparator_h

4
mo/src/comparator/moEqualSolComparator.h
View file

@ -28,8 +28,8 @@
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moEqualSolComparator_h

4
mo/src/comparator/moEqualSolNeighborComparator.h
View file

@ -28,8 +28,8 @@
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moEqualSolNeighborComparator_h

4
mo/src/comparator/moNeighborComparator.h
View file

@ -28,8 +28,8 @@
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moNeighborComparator_h

4
mo/src/comparator/moSolComparator.h
View file

@ -23,8 +23,8 @@ same conditions as regards security.
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moSolComparator_h

4
mo/src/comparator/moSolNeighborComparator.h
View file

@ -28,8 +28,8 @@
The fact that you are presently reading this means that you have had
knowledge of the CeCILL license and that you accept its terms.
ParadisEO WebSite : http://paradiseo.gforge.inria.fr
Contact: paradiseo-help@lists.gforge.inria.fr
ParadisEO WebSite : https://nojhan.github.io/paradiseo/
Contact: https://github.com/nojhan/paradiseo/issues
*/
#ifndef _moSolNeighborComparator_h

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