diff --git a/trunk/problems/eval/ubqpEval.h b/trunk/problems/eval/ubqpEval.h new file mode 100644 index 000000000..a6623cce0 --- /dev/null +++ b/trunk/problems/eval/ubqpEval.h @@ -0,0 +1,170 @@ +/* + +Copyright (C) DOLPHIN Project-Team, INRIA Lille - Nord Europe, 2006-2010 + +Sebastien Verel + +This software is governed by the CeCILL license under French law and +abiding by the rules of distribution of free software. You can ue, +modify and/ or redistribute the software under the terms of the CeCILL +license as circulated by CEA, CNRS and INRIA at the following URL +"http://www.cecill.info". + +In this respect, the user's attention is drawn to the risks associated +with loading, using, modifying and/or developing or reproducing the +software by the user in light of its specific status of free software, +that may mean that it is complicated to manipulate, and that also +therefore means that it is reserved for developers and experienced +professionals having in-depth computer knowledge. Users are therefore +encouraged to load and test the software's suitability as regards their +requirements in conditions enabling the security of their systems and/or +data to be ensured and, more generally, to use and operate it in the +same conditions as regards security. +The fact that you are presently reading this means that you have had +knowledge of the CeCILL license and that you accept its terms. + +ParadisEO WebSite : http://paradiseo.gforge.inria.fr +Contact: paradiseo-help@lists.gforge.inria.fr +*/ + +#ifndef _ubqpEval_h +#define _ubqpEval_h + +#include +#include + +/** + * Full evaluation Function for unconstrainted binary quadratic programming problem + */ +template< class EOT > +class UbqpEval : public eoEvalFunc +{ +public: + + /** + * Constructor + * instance is given in the ORLIB format: + * The format of these data files is: + * number of test problem in the serie + * for each test problem in turn: + * number of variables (n), number of non-zero elements in the q(i,j) matrix + * for each non-zero element in turn: + * i, j, q(i,j) {=q(j,i) as the matrix is symmetric} + * + * @param _fileName file name of the instance in ORLIB format + * @param _numInstance the number of the given instance to solve + */ + UbqpEval(std::string & _fileName, unsigned int _numInstance = 0) { + std::fstream file(_fileName.c_str(), std::ios::in); + + if (!file) { + std::string str = "UbqpEval: Could not open file [" + _fileName + "]." ; + throw std::runtime_error(str); + } + + unsigned int nbInstances; + file >> nbInstances; + + unsigned int i, j; + int v; + + for(unsigned k = 0; k < _numInstance; k++) { + file >> nbVar >> nbNonZero; + for(unsigned kk = 0; kk < nbNonZero; kk++) + file >> i >> j >> v; + } + + // the chosen instance + file >> nbVar >> nbNonZero; + + // creation of the matrix + Q = new int*[nbVar]; + + for(unsigned int i = 0; i < nbVar; i++) { + Q[i] = new int[nbVar]; + for(unsigned int j = 0; j < nbVar; j++) + Q[i][j] = 0; + } + + // read the matrix + for(unsigned int k = 0; k < nbNonZero; k++) { + file >> i >> j >> v; + Q[i][j] = v; + } + + file.close(); + + // put the matrix in lower triangular form + for(unsigned i = 1; i < nbVar; i++) + for(unsigned int j = 0; j < i; j++) { + Q[i][j] = Q[i][j] + Q[j][i]; + Q[j][i] = 0; + } + } + + /** + * Destructor + */ + ~UbqpEval() { + if (Q != NULL) { + for(unsigned i = 0; i < nbVar; i++) + delete[] Q[i]; + + // delete the matrix + delete[] Q; + } + } + + /** + * fitness evaluation of the solution + * + * @param _solution the solution to evaluation + */ + virtual void operator()(EOT & _solution) { + int fit = 0; + unsigned int j; + + for(unsigned i = 0; i < nbVar; i++) + if (_solution[i] == 1) + for(j = 0; j < i; j++) + if (_solution[j] == 1) + fit += Q[i][j]; + + _solution.fitness(fit); + } + + /* + * to get the matrix Q + * + * @return matrix Q + */ + int** getQ() { + return Q; + } + + /* + * to get the number of variable (bit string length) + * + * @return bit string length + */ + int getNbVar() { + return nbVar; + } + +private: + /** + * variables (used in incremental evaluation) + */ + + // number of variable + unsigned int nbVar; + + // number of non zero in the matrix + unsigned int nbNonZero; + + // matrix of flux: + // the matrix is put in lower triangular form: for i