First instances of the make_xxx_pareto, where xxx is algo, continue and checkpoint
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eo/src/do/make_checkpoint_pareto.h
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eo/src/do/make_checkpoint_pareto.h
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// -*- mode: c++; c-indent-level: 4; c++-member-init-indent: 8; comment-column: 35; -*-
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//-----------------------------------------------------------------------------
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// make_checkpoint_pareto.h
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// (c) Maarten Keijzer, Marc Schoenauer and GeNeura Team, 2000
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/*
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This library is free software; you can redistribute it and/or
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modify it under the terms of the GNU Lesser General Public
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License as published by the Free Software Foundation; either
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version 2 of the License, or (at your option) any later version.
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This library is distributed in the hope that it will be useful,
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but WITHOUT ANY WARRANTY; without even the implied warranty of
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MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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Lesser General Public License for more details.
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You should have received a copy of the GNU Lesser General Public
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License along with this library; if not, write to the Free Software
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Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
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Contact: todos@geneura.ugr.es, http://geneura.ugr.es
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Marc.Schoenauer@inria.fr
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mkeijzer@dhi.dk
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*/
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//-----------------------------------------------------------------------------
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#ifndef _make_checkpoint_pareto_h
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#define _make_checkpoint_pareto_h
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#include <stdlib.h>
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#include "eoParetoFitness.h"
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#include "utils/selectors.h"
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#include "EO.h"
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#include "eoEvalFuncCounter.h"
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#include "utils/checkpointing"
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// at the moment, in utils/make_help.cpp
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// this should become some eoUtils.cpp with corresponding eoUtils.h
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bool testDirRes(std::string _dirName, bool _erase);
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/////////////////// The checkpoint and other I/O //////////////
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/** Of course, Fitness needs to be an eoParetoFitness!!!
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*/
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template <class EOT>
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eoCheckPoint<EOT>& do_make_checkpoint_pareto(eoParser& _parser, eoState& _state, eoEvalFuncCounter<EOT>& _eval, eoContinue<EOT>& _continue)
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{
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// first, create a checkpoint from the eoContinue - and store in _state
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eoCheckPoint<EOT> & checkpoint =
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_state.storeFunctor(new eoCheckPoint<EOT>(_continue));
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/////// get number of obectives from Fitness - not very elegant
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typedef typename EOT::Fitness Fit;
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Fit fit;
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unsigned nObj = fit.size();
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///////////////////
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// Counters
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//////////////////
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// is nb Eval to be used as counter?
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bool useEval = _parser.createParam(true, "useEval", "Use nb of eval. as counter (vs nb of gen.)", '\0', "Output").value();
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// Create anyway a generation-counter parameter WARNING: not stored anywhere!!!
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eoValueParam<unsigned> *generationCounter = new eoValueParam<unsigned>(0, "Gen.");
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// Create an incrementor (sub-class of eoUpdater).
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eoIncrementor<unsigned> & increment =
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_state.storeFunctor(new eoIncrementor<unsigned>(generationCounter->value()) );
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// Add it to the checkpoint,
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checkpoint.add(increment);
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// dir for DISK output
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string & dirName = _parser.createParam(string("Res"), "resDir", "Directory to store DISK outputs", '\0', "Output - Disk").value();
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// shoudl we empty it if exists
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eoValueParam<bool>& eraseParam = _parser.createParam(true, "eraseDir", "erase files in dirName if any", '\0', "Output - Disk");
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bool dirOK = false; // not tested yet
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/////////////////////////////////////////
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// now some statistics on the population:
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/////////////////////////////////////////
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/**
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* existing stats for Pareto as of today, Jan. 31. 2002
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*
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* eoSortedPopStat : whole population - type string (!!)
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*/
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eoValueParam<eoParamParamType>& fPlotParam = _parser.createParam(eoParamParamType("1(0,1)"), "frontPlot", "Fronts (pairs of comma-separated objectives in 1 single parentheses pair)", '\0', "Output - Graphical");
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eoParamParamType & fPlot = fPlotParam.value(); // pair<string,vector<string> >
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unsigned frequency = atoi(fPlot.first.c_str());
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if (frequency) // something to plot
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{
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unsigned nbPlot = fPlot.second.size();
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if ( nbPlot % 2 ) // odd!
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throw runtime_error("Odd number of objectives in make_checkpoint_pareto");
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// only create the necessary stats
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std::vector<bool> bStat(nObj, false); // track of who's already there
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std::vector<eoMOFitnessStat<EOT>* > theStats(nObj);
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for (unsigned i=0; i<nbPlot/2; i+=2)
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{
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unsigned obj1 = atoi(fPlot.second[i].c_str());
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unsigned obj2 = atoi(fPlot.second[i+1].c_str());
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eoMOFitnessStat<EOT>* fStat;
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if (!bStat[obj1]) // not already there: create it
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{
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char s[1024];
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ostrstream os(s, 1022);
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os << "Obj. " << obj1 << ends;
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fStat = new eoMOFitnessStat<EOT>(obj1, s);
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_state.storeFunctor(fStat);
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bStat[obj1]=true;
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theStats[obj1]=fStat;
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checkpoint.add(*fStat);
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}
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if (!bStat[obj2]) // not already there: create it
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{
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char s2[1024];
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ostrstream os2(s2, 1022);
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os2 << "Obj. " << obj2 << ends;
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fStat = new eoMOFitnessStat<EOT>(obj2, s2);
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_state.storeFunctor(fStat);
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bStat[obj2]=true;
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theStats[obj2]=fStat;
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checkpoint.add(*fStat);
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}
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#if !defined(NO_GNUPLOT)
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char s3[1024];
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ostrstream os3(s3, 1022);
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os3 << "Front." << obj1 << "." << obj2 << "." << ends;
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eoGnuplot1DSnapshot & snapshot = _state.storeFunctor(new
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eoGnuplot1DSnapshot(dirName, frequency, s3 ) );
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snapshot.pointSize =3;
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checkpoint.add(snapshot);
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snapshot.add(*theStats[obj1]);
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snapshot.add(*theStats[obj2]);
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#endif
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}
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}
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// Dump of the whole population
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//-----------------------------
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bool printPop = _parser.createParam(false, "printPop", "Print sorted pop. every gen.", '\0', "Output").value();
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eoSortedPopStat<EOT> * popStat;
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if ( printPop ) // we do want pop dump
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{
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cout << "On cree printpop\n";
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popStat = & _state.storeFunctor(new eoSortedPopStat<EOT>);
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// add it to the checkpoint
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checkpoint.add(*popStat);
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}
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///////////////
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// The monitors
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///////////////
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// do we want an eoStdoutMonitor?
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bool needStdoutMonitor = printPop ; // only this one at the moment
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// The Stdout monitor will print parameters to the screen ...
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if ( needStdoutMonitor )
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{
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eoStdoutMonitor & monitor = _state.storeFunctor(new eoStdoutMonitor(false));
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// when called by the checkpoint (i.e. at every generation)
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checkpoint.add(monitor);
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// the monitor will output a series of parameters: add them
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monitor.add(*generationCounter);
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if (useEval) // we want nb of evaluations
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monitor.add(_eval);
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if ( printPop)
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monitor.add(*popStat);
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}
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//////////////////////////////////
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// State savers
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//////////////////////////////
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// feed the state to state savers
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// save state every N generation
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eoValueParam<unsigned>& saveFrequencyParam = _parser.createParam(unsigned(0), "saveFrequency", "Save every F generation (0 = only final state, absent = never)", '\0', "Persistence" );
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if (_parser.isItThere(saveFrequencyParam))
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{
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// first make sure dirName is OK
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if (! dirOK )
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dirOK = testDirRes(dirName, eraseParam.value()); // TRUE
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unsigned freq = (saveFrequencyParam.value()>0 ? saveFrequencyParam.value() : UINT_MAX );
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#ifdef _MSVC
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string stmp = dirName + "\generations";
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#else
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string stmp = dirName + "/generations";
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#endif
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eoCountedStateSaver *stateSaver1 = new eoCountedStateSaver(freq, _state, stmp);
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_state.storeFunctor(stateSaver1);
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checkpoint.add(*stateSaver1);
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}
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// save state every T seconds
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eoValueParam<unsigned>& saveTimeIntervalParam = _parser.createParam(unsigned(0), "saveTimeInterval", "Save every T seconds (0 or absent = never)", '\0',"Persistence" );
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if (_parser.isItThere(saveTimeIntervalParam) && saveTimeIntervalParam.value()>0)
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{
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// first make sure dirName is OK
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if (! dirOK )
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dirOK = testDirRes(dirName, eraseParam.value()); // TRUE
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#ifdef _MSVC
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string stmp = dirName + "\time";
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#else
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string stmp = dirName + "/time";
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#endif
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eoTimedStateSaver *stateSaver2 = new eoTimedStateSaver(saveTimeIntervalParam.value(), _state, stmp);
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_state.storeFunctor(stateSaver2);
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checkpoint.add(*stateSaver2);
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}
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// and that's it for the (control and) output
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return checkpoint;
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}
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#endif
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