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git-svn-id: svn://scm.gforge.inria.fr/svnroot/paradiseo@772 331e1502-861f-0410-8da2-ba01fb791d7f
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canape 2007-11-08 12:51:46 +00:00
commit 4880c449c8
42 changed files with 947 additions and 2589 deletions
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98
trunk/paradiseo-peo/tutorial/Lesson5/CMakeLists.txt
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@ -1,98 +0,0 @@
######################################################################################
### 0) Set the compiler and define targets to easily run the lessons
######################################################################################
SET (CMAKE_CXX_COMPILER mpicxx)
ADD_CUSTOM_TARGET(install DEPENDS ${ParadisEO-PEO_SOURCE_DIR}/tutorial/Lesson5/lesson.param ${ParadisEO-PEO_SOURCE_DIR}/tutorial/Lesson5/schema.xml)
ADD_CUSTOM_COMMAND(
TARGET install
POST_BUILD
COMMAND ${CMAKE_COMMAND}
ARGS -E copy_if_different
${ParadisEO-PEO_SOURCE_DIR}/tutorial/Lesson5/lesson.param
${ParadisEO-PEO_BINARY_DIR}/tutorial/Lesson5)
ADD_CUSTOM_COMMAND(
TARGET install
POST_BUILD
COMMAND ${CMAKE_COMMAND}
ARGS -E copy_if_different
${ParadisEO-PEO_SOURCE_DIR}/tutorial/Lesson5/schema.xml
${ParadisEO-PEO_BINARY_DIR}/tutorial/Lesson5)
######################################################################################
######################################################################################
### 1) Include the sources
######################################################################################
INCLUDE_DIRECTORIES(${EO_SRC_DIR}/src ${MO_SRC_DIR}/src ${ParadisEO-PEO_SOURCE_DIR}/src)
######################################################################################
######################################################################################
### 2) Specify where CMake can find the libraries
######################################################################################
IF(NOT WIN32 OR CYGWIN)
LINK_DIRECTORIES(${EO_BIN_DIR}/lib ${ParadisEO-PEO_BINARY_DIR}/lib)
ENDIF(NOT WIN32 OR CYGWIN)
# especially for Visual Studio
IF(WIN32 AND NOT CYGWIN)
LINK_DIRECTORIES(${EO_BIN_DIR}\\lib\\${CMAKE_BUILD_TYPE} ${ParadisEO-PEO_BINARY_DIR}\\lib\\${CMAKE_BUILD_TYPE})
ENDIF(WIN32 AND NOT CYGWIN)
######################################################################################
######################################################################################
### 3) Define your target(s): just an executable here
######################################################################################
ADD_EXECUTABLE(psoExample main.cpp)
ADD_DEPENDENCIES(psoExample peo rmc_mpi)
######################################################################################
######################################################################################
### 4) Optionnal: define properties
######################################################################################
SET(LESSON4_VERSION ${GLOBAL_VERSION})
SET_TARGET_PROPERTIES(psoExample PROPERTIES VERSION "${LESSON4_VERSION}")
######################################################################################
######################################################################################
### 5) Link the librairies
######################################################################################
TARGET_LINK_LIBRARIES(psoExample ${XML2_LIBS} peo rmc_mpi eo eoutils)
######################################################################################
######################################################################################
### 6) Windows advanced config - especially for Microsoft Visual Studio 8
######################################################################################
IF(CMAKE_CXX_COMPILER MATCHES cl)
IF(NOT WITH_SHARED_LIBS)
IF(CMAKE_GENERATOR STREQUAL "Visual Studio 8 2005")
SET(CMAKE_CXX_FLAGS "/nologo /W3 /Gy")
SET(CMAKE_CXX_FLAGS_DEBUG "/MTd /Z7 /Od")
SET(CMAKE_CXX_FLAGS_RELEASE "/MT /O2")
SET(CMAKE_CXX_FLAGS_MINSIZEREL "/MT /O2")
SET(CMAKE_CXX_FLAGS_RELWITHDEBINFO "/MTd /Z7 /Od")
SET(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} /SUBSYSTEM:CONSOLE")
ENDIF(CMAKE_GENERATOR STREQUAL "Visual Studio 8 2005")
ENDIF(NOT WITH_SHARED_LIBS)
ENDIF(CMAKE_CXX_COMPILER MATCHES cl)
######################################################################################

166
trunk/paradiseo-peo/tutorial/Lesson5/main.cpp
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@ -1,166 +0,0 @@
/*
* <main.cpp>
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
* (C) OPAC Team, LIFL, 2002-2007
*
* Clive Canape
*
* This software is governed by the CeCILL license under French law and
* abiding by the rules of distribution of free software. You can use,
* modify and/ or redistribute the software under the terms of the CeCILL
* license as circulated by CEA, CNRS and INRIA at the following URL
* "http://www.cecill.info".
*
* As a counterpart to the access to the source code and rights to copy,
* modify and redistribute granted by the license, users are provided only
* with a limited warranty and the software's author, the holder of the
* economic rights, and the successive licensors have only limited liability.
*
* In this respect, the user's attention is drawn to the risks associated
* with loading, using, modifying and/or developing or reproducing the
* software by the user in light of its specific status of free software,
* that may mean that it is complicated to manipulate, and that also
* therefore means that it is reserved for developers and experienced
* professionals having in-depth computer knowledge. Users are therefore
* encouraged to load and test the software's suitability as regards their
* requirements in conditions enabling the security of their systems and/or
* data to be ensured and, more generally, to use and operate it in the
* same conditions as regards security.
* The fact that you are presently reading this means that you have had
* knowledge of the CeCILL license and that you accept its terms.
*
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
* Contact: paradiseo-help@lists.gforge.inria.fr
* clive.canape@inria.fr
*/
#include <peo>
// You can choose : a replacement or an affectation on the velocity
#define REPLAC
typedef eoRealParticle < double >Indi;
//Evaluation function
double f (const Indi & _indi)
{
//Levy function f* = -21.502356 x*=(1,1,1,-9.752356 ) for vector size = 4
const double PI = 4.0 * atan(1.0);
double sum=0.;
for (unsigned i = 0; i < _indi.size()-1; i++)
sum+=pow((_indi[i]-1),2)*(1+pow(sin(3*PI*_indi[i+1]),2));
sum+=pow(sin(3*PI*_indi[0]),2);
sum+=(_indi[_indi.size()-1]-1)*(1+pow(sin(2*PI*_indi[_indi.size()-1]),2));
return (-sum);
}
int main (int __argc, char *__argv[])
{
//Initialization
peo :: init( __argc, __argv );
//Parameters
const unsigned int MIG_FREQ = 10; // 1 or 2 for peoPSOVelocity ...
const unsigned int VEC_SIZE = 4;
const unsigned int POP_SIZE = 10;
const unsigned int NEIGHBORHOOD_SIZE= 5;
const unsigned int MAX_GEN = 100;
const double INIT_POSITION_MIN = -10.0;
const double INIT_POSITION_MAX = 1.0;
const double INIT_VELOCITY_MIN = -1;
const double INIT_VELOCITY_MAX = 1;
const double C1 = 1;
const double C2 = 0.5;
// c3 is used to calculate of an affectation on the velocity
const double C3 = 2;
rng.reseed (time(0));
peoEvalFuncPSO<Indi, double, const Indi& > plainEval(f);
eoUniformGenerator < double >uGen (INIT_POSITION_MIN, INIT_POSITION_MAX);
eoInitFixedLength < Indi > random (VEC_SIZE, uGen);
eoUniformGenerator < double >sGen (INIT_VELOCITY_MIN, INIT_VELOCITY_MAX);
eoVelocityInitFixedLength < Indi > veloRandom (VEC_SIZE, sGen);
eoFirstIsBestInit < Indi > localInit;
eoRealVectorBounds bndsFlight(VEC_SIZE,INIT_POSITION_MIN,INIT_POSITION_MAX);
eoStandardFlight < Indi > flight(bndsFlight);
eoEvalFuncCounter < Indi > evalSeq (plainEval);
peoParaPopEval< Indi > eval(plainEval);
eoPop < Indi > pop;
pop.append (POP_SIZE, random);
apply(evalSeq, pop);
apply < Indi > (veloRandom, pop);
apply < Indi > (localInit, pop);
eoLinearTopology<Indi> topology(NEIGHBORHOOD_SIZE);
topology.setup(pop);
eoRealVectorBounds bnds(VEC_SIZE,INIT_VELOCITY_MIN,INIT_VELOCITY_MAX);
eoStandardVelocity < Indi > velocity (topology,C1,C2,bnds);
eoGenContinue < Indi > genContPara (MAX_GEN);
eoCheckPoint<Indi> checkpoint(genContPara);
RingTopology topologyMig;
/*******************************************************************/
eoPeriodicContinue< Indi > mig_cont( MIG_FREQ );
peoPSOSelect<Indi> mig_selec(topology);
eoSelectNumber< Indi > mig_select(mig_selec);
#ifndef REPLAC
peoPSOVelocity<Indi> mig_replace(C3,velocity);
#else
peoPSOReplacement<Indi> mig_replace;
#endif
/*****************************************************************/
peoEvalFuncPSO<Indi, double, const Indi& > plainEval2(f);
eoUniformGenerator < double >uGen2 (INIT_POSITION_MIN, INIT_POSITION_MAX);
eoInitFixedLength < Indi > random2 (VEC_SIZE, uGen);
eoUniformGenerator < double >sGen2 (INIT_VELOCITY_MIN, INIT_VELOCITY_MAX);
eoVelocityInitFixedLength < Indi > veloRandom2 (VEC_SIZE, sGen2);
eoFirstIsBestInit < Indi > localInit2;
eoRealVectorBounds bndsFlight2(VEC_SIZE,INIT_POSITION_MIN,INIT_POSITION_MAX);
eoStandardFlight < Indi > flight2(bndsFlight2);
eoEvalFuncCounter < Indi > evalSeq2 (plainEval2);
peoParaPopEval< Indi > eval2(plainEval2);
eoPop < Indi > pop2;
pop2.append (POP_SIZE, random2);
apply(evalSeq2, pop2);
apply < Indi > (veloRandom2, pop2);
apply < Indi > (localInit2, pop2);
eoLinearTopology<Indi> topology2(NEIGHBORHOOD_SIZE);
topology2.setup(pop2);
eoRealVectorBounds bnds2(VEC_SIZE,INIT_VELOCITY_MIN,INIT_VELOCITY_MAX);
eoStandardVelocity < Indi > velocity2 (topology2,C1,C2,bnds2);
eoGenContinue < Indi > genContPara2 (MAX_GEN);
eoCheckPoint<Indi> checkpoint2(genContPara2);
/*******************************************************************/
eoPeriodicContinue< Indi > mig_cont2( MIG_FREQ );
peoPSOSelect<Indi> mig_selec2(topology2);
eoSelectNumber< Indi > mig_select2(mig_selec2);
#ifndef REPLAC
peoPSOVelocity<Indi> mig_replace2(C3,velocity2);
#else
peoPSOReplacement<Indi> mig_replace2;
#endif
/*******************************************************************/
peoAsyncIslandMig< Indi > mig( mig_cont, mig_select, mig_replace, topologyMig, pop, pop2);
checkpoint.add( mig );
peoAsyncIslandMig< Indi > mig2( mig_cont2, mig_select2, mig_replace2, topologyMig, pop2, pop);
checkpoint.add( mig2 );
peoPSO < Indi > psa(checkpoint, eval, velocity, flight);
mig.setOwner( psa );
psa(pop);
peoPSO < Indi > psa2(checkpoint2, eval2, velocity2, flight2);
mig2.setOwner( psa2 );
psa2(pop2);
peo :: run();
peo :: finalize();
if(getNodeRank()==1)
{
std::cout << "Population 1 :\n" << pop << std::endl;
std::cout << "Population 2 :\n" << pop2 << std::endl;
}
}

43
trunk/paradiseo-peo/tutorial/Lesson5/mainEA.cpp Normal file
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@ -0,0 +1,43 @@
/*
* <main.cpp>
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
* (C) OPAC Team, INRIA, 2007
*
* Clive Canape
*
* This software is governed by the CeCILL license under French law and
* abiding by the rules of distribution of free software. You can use,
* modify and/ or redistribute the software under the terms of the CeCILL
* license as circulated by CEA, CNRS and INRIA at the following URL
* "http://www.cecill.info".
*
* As a counterpart to the access to the source code and rights to copy,
* modify and redistribute granted by the license, users are provided only
* with a limited warranty and the software's author, the holder of the
* economic rights, and the successive licensors have only limited liability.
*
* In this respect, the user's attention is drawn to the risks associated
* with loading, using, modifying and/or developing or reproducing the
* software by the user in light of its specific status of free software,
* that may mean that it is complicated to manipulate, and that also
* therefore means that it is reserved for developers and experienced
* professionals having in-depth computer knowledge. Users are therefore
* encouraged to load and test the software's suitability as regards their
* requirements in conditions enabling the security of their systems and/or
* data to be ensured and, more generally, to use and operate it in the
* same conditions as regards security.
* The fact that you are presently reading this means that you have had
* knowledge of the CeCILL license and that you accept its terms.
*
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
* Contact: paradiseo-help@lists.gforge.inria.fr
*
*/
#include <peo>
#include <es.h>
int main (int __argc, char *__argv[])
{
std::cout<<"\nHybridization\n";
}

42
trunk/paradiseo-peo/tutorial/Lesson5/mainPSO.cpp Normal file
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@ -0,0 +1,42 @@
/*
* <main.cpp>
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
* (C) OPAC Team, INRIA, 2007
*
* Clive Canape
*
* This software is governed by the CeCILL license under French law and
* abiding by the rules of distribution of free software. You can use,
* modify and/ or redistribute the software under the terms of the CeCILL
* license as circulated by CEA, CNRS and INRIA at the following URL
* "http://www.cecill.info".
*
* As a counterpart to the access to the source code and rights to copy,
* modify and redistribute granted by the license, users are provided only
* with a limited warranty and the software's author, the holder of the
* economic rights, and the successive licensors have only limited liability.
*
* In this respect, the user's attention is drawn to the risks associated
* with loading, using, modifying and/or developing or reproducing the
* software by the user in light of its specific status of free software,
* that may mean that it is complicated to manipulate, and that also
* therefore means that it is reserved for developers and experienced
* professionals having in-depth computer knowledge. Users are therefore
* encouraged to load and test the software's suitability as regards their
* requirements in conditions enabling the security of their systems and/or
* data to be ensured and, more generally, to use and operate it in the
* same conditions as regards security.
* The fact that you are presently reading this means that you have had
* knowledge of the CeCILL license and that you accept its terms.
*
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
* Contact: paradiseo-help@lists.gforge.inria.fr
*
*/
#include <peo>
int main (int __argc, char *__argv[])
{
std::cout<<"\nHybridization\n";
}

1
trunk/paradiseo-peo/tutorial/Lesson5/paradiseo-peo.lsn.doxyfile → trunk/paradiseo-peo/tutorial/Lesson5/paradiseo-peo-lsn.doxyfile
View file

@ -239,3 +239,4 @@ DOT_CLEANUP = YES
# Configuration::additions related to the search engine
#---------------------------------------------------------------------------
SEARCHENGINE = YES

4
trunk/paradiseo-peo/tutorial/Lesson5/lesson.param → trunk/paradiseo-peo/tutorial/Lesson5/param
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@ -4,4 +4,6 @@
## deployment schema
--schema=schema.xml
--schema=schema.xml

19
trunk/paradiseo-peo/tutorial/Lesson5/schema.xml
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@ -1,19 +0,0 @@
<?xml version="1.0"?>
<schema>
<group scheduler="0">
<node name="0" num_workers="0">
</node>
<node name="1" num_workers="0">
<runner>1</runner>
<runner>2</runner>
</node>
<node name="2" num_workers="1">
</node>
<node name="3" num_workers="1">
</node>
</group>
</schema>