Merge from rc2.0
git-svn-id: svn://scm.gforge.inria.fr/svnroot/paradiseo@2713 331e1502-861f-0410-8da2-ba01fb791d7f
This commit is contained in:
quemy
parent
71864c2a6e
commit
409a1b21b8
1731 changed files with 104909 additions and 64375 deletions
17
trunk/moeo/CMakeLists.txt
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17
trunk/moeo/CMakeLists.txt
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######################################################################################
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### 0) Include subdirectories
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######################################################################################
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add_subdirectory(doc)
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add_subdirectory(src)
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if(ENABLE_CMAKE_TESTING)
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add_subdirectory(test)
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endif(ENABLE_CMAKE_TESTING)
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if(ENABLE_CMAKE_EXAMPLE)
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if(${CMAKE_VERBOSE_MAKEFILE})
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message("MOEO Examples :")
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endif(${CMAKE_VERBOSE_MAKEFILE})
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add_subdirectory(tutorial)
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endif(ENABLE_CMAKE_EXAMPLE)
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39
trunk/moeo/doc/CMakeLists.txt
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39
trunk/moeo/doc/CMakeLists.txt
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@ -0,0 +1,39 @@
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######################################################################################
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### 0) Documentation
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######################################################################################
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if(DOXYGEN_FOUND)
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# Directory where the generation will be launched
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set(MOEO_DOC_DIR ${CMAKE_CURRENT_BINARY_DIR} CACHE PATH "Documentation directory")
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# Name of the doxygene configuration file
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set(MOEO_DOC_CONFIG_FILE "moeo.doxyfile" CACHE PATH "Documentation configuration file")
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if(DOXYGEN_EXECUTABLE)
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# Creating the custom target
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if(UNIX AND NOT ${CMAKE_VERBOSE_MAKEFILE})
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add_custom_target(doc-moeo
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COMMAND ${DOXYGEN_EXECUTABLE} ${MOEO_DOC_CONFIG_FILE} 2> /dev/null > /dev/null
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WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
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)
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else(UNIX AND NOT ${CMAKE_VERBOSE_MAKEFILE})
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add_custom_target(doc-moeo
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COMMAND ${DOXYGEN_EXECUTABLE} ${MOEO_DOC_CONFIG_FILE}
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WORKING_DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
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)
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endif(UNIX AND NOT ${CMAKE_VERBOSE_MAKEFILE})
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endif(DOXYGEN_EXECUTABLE)
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configure_file("${CMAKE_CURRENT_SOURCE_DIR}/${MOEO_DOC_CONFIG_FILE}.cmake"
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"${MOEO_DOC_DIR}/${MOEO_DOC_CONFIG_FILE}")
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install(
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DIRECTORY ${CMAKE_CURRENT_BINARY_DIR}
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DESTINATION share${INSTALL_SUB_DIR}/moeo COMPONENT doc
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PATTERN "CMakeFiles" EXCLUDE
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PATTERN "cmake_install.cmake" EXCLUDE
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PATTERN "CTestTestfile.cmake" EXCLUDE
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PATTERN "Makefile" EXCLUDE
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PATTERN "moeo.cfg" EXCLUDE
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PATTERN "moeo.doxytag" EXCLUDE
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)
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else(DOXYGEN_FOUND)
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message(STATUS "Unable to generate the documentation, Doxygen package not found")
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endif(DOXYGEN_FOUND)
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71
trunk/moeo/doc/index.h
Normal file
71
trunk/moeo/doc/index.h
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/** @mainpage Welcome to ParadisEO-MOEO
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@section Introduction
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ParadisEO-MOEO is a white-box object-oriented generic framework dedicated to the flexible design of evolutionary multi-objective algorithms.
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This paradigm-free software embeds some features and techniques for Pareto-based resolution and
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aims to provide a set of classes allowing to ease and speed up the development of computationally efficient programs.
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It is based on a clear conceptual distinction between the solution methods and the multi-objective problems they are intended to solve.
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This separation confers a maximum design and code reuse.
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ParadisEO-MOEO provides a broad range of archive-related features (such as elitism or performance metrics)
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and the most common Pareto-based fitness assignment strategies (MOGA, NSGA, SPEA, IBEA and more). Dominance-based Local Search are also available.
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Furthermore, parallel and distributed models as well as hybridization mechanisms can be applied to an algorithm designed within ParadisEO-MOEO
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using the whole version of ParadisEO.
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@section tutorials Tutorials
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Tutorials for ParadisEO-MOEO are available in the "Tutorials section" of the <a href="http://paradiseo.gforge.inria.fr">ParadisEO website</a>.
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@section Installation
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The installation procedure of the package is detailed in the README file in the top-directory of the source-tree.
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@section Design
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For an introduction to the design of ParadisEO-MOEO,
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you can look at the <a href="http://paradiseo.gforge.inria.fr">ParadisEO website</a>.
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@section LICENSE
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This software is governed by the CeCILL license under French law and
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abiding by the rules of distribution of free software. You can use,
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modify and/ or redistribute the software under the terms of the CeCILL
|
||||
license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
"http://www.cecill.info".
|
||||
|
||||
As a counterpart to the access to the source code and rights to copy,
|
||||
modify and redistribute granted by the license, users are provided only
|
||||
with a limited warranty and the software's author, the holder of the
|
||||
economic rights, and the successive licensors have only limited liability.
|
||||
|
||||
In this respect, the user's attention is drawn to the risks associated
|
||||
with loading, using, modifying and/or developing or reproducing the
|
||||
software by the user in light of its specific status of free software,
|
||||
that may mean that it is complicated to manipulate, and that also
|
||||
therefore means that it is reserved for developers and experienced
|
||||
professionals having in-depth computer knowledge. Users are therefore
|
||||
encouraged to load and test the software's suitability as regards their
|
||||
requirements in conditions enabling the security of their systems and/or
|
||||
data to be ensured and, more generally, to use and operate it in the
|
||||
same conditions as regards security.
|
||||
The fact that you are presently reading this means that you have had
|
||||
knowledge of the CeCILL license and that you accept its terms.
|
||||
|
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ParadisEO WebSite : http://paradiseo.gforge.inria.fr
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Contact: paradiseo-help@lists.gforge.inria.fr
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*/
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/** @page webpages Related webpages
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- ParadisEO <a href="http://paradiseo.gforge.inria.fr">homepage</a>
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- INRIA GForge <a href="http://gforge.inria.fr/projects/paradiseo/">project page</a>
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- <a href="../../README">README</a>
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*/
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1523
trunk/moeo/doc/moeo.doxyfile.cmake
Normal file
1523
trunk/moeo/doc/moeo.doxyfile.cmake
Normal file
File diff suppressed because it is too large
Load diff
44
trunk/moeo/src/CMakeLists.txt
Normal file
44
trunk/moeo/src/CMakeLists.txt
Normal file
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@ -0,0 +1,44 @@
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######################################################################################
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### 0) Include directories
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######################################################################################
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include_directories(${EO_SRC_DIR})
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include_directories(${MO_SRC_DIR}/src)
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include_directories(${CMAKE_CURRENT_SOURCE_DIR})
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######################################################################################
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### 1) Set paths
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######################################################################################
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set(MOEO_LIB_OUTPUT_PATH ${MOEO_BIN_DIR}/lib)
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set(LIBRARY_OUTPUT_PATH ${MOEO_LIB_OUTPUT_PATH})
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######################################################################################
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### 2) Build lib
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######################################################################################
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set (MOEO_CORE core/moeoObjectiveVectorTraits.cpp)
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add_library(moeo STATIC ${MOEO_CORE})
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set(MOEO_VERSION ${GLOBAL_VERSION})
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set_target_properties(moeo PROPERTIES VERSION "${MOEO_VERSION}")
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install(TARGETS moeo ARCHIVE DESTINATION ${LIB} COMPONENT libraries)
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######################################################################################
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### 3) Look for headers
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######################################################################################
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file(GLOB HDRS moeo)
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install(FILES ${HDRS} DESTINATION include${INSTALL_SUB_DIR}/moeo COMPONENT headers)
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######################################################################################
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### 4) Install directories
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######################################################################################
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install(DIRECTORY acceptCrit algo archive comparator core distance diversity do explorer fitness hybridization metric replacement scalarStuffs selection utils
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DESTINATION include${INSTALL_SUB_DIR}/moeo
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COMPONENT headers
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FILES_MATCHING PATTERN "*.h"
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)
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208
trunk/moeo/src/algo/moeoASEEA.h
Normal file
208
trunk/moeo/src/algo/moeoASEEA.h
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@ -0,0 +1,208 @@
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|||
/*
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||||
* <moeoASEEA.h>
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||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
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||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
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||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
* François Legillon
|
||||
* Thibaut demaret
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
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||||
*/
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//-----------------------------------------------------------------------------
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#ifndef MOEOASEEA_H_
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#define MOEOASEEA_H_
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#include <eoBreed.h>
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#include <eoCloneOps.h>
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#include <eoContinue.h>
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#include <eoEvalFunc.h>
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#include <eoGenContinue.h>
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#include <eoGeneralBreeder.h>
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#include <eoGenOp.h>
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#include <eoPopEvalFunc.h>
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#include <eoSGAGenOp.h>
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#include <algo/moeoEA.h>
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#include <archive/moeoArchive.h>
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#include <selection/moeoRandomSelect.h>
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#include <selection/moeoSelectFromPopAndArch.h>
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#include <selection/moeoDetArchiveSelect.h>
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/**
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* ASEEA (Adaptive Simple Elitist Evolutionary Algorithm).
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*/
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template < class MOEOT >
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class moeoASEEA : public moeoEA < MOEOT >
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{
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public:
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|
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/**
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* Ctor with a crossover, a mutation and their corresponding rates.
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* @param _maxGen number of generations before stopping
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* @param _eval evaluation function
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* @param _crossover crossover
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||||
* @param _pCross crossover probability
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* @param _mutation mutation
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* @param _pMut mutation probability
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* @param _archive archive
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||||
* @param _max the max size for the pop
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*/
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moeoASEEA (unsigned int _maxGen, eoEvalFunc < MOEOT > & _eval, eoQuadOp < MOEOT > & _crossover, double _pCross, eoMonOp < MOEOT > & _mutation, double _pMut, moeoArchive < MOEOT > & _archive, unsigned int _max) :
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defaultGenContinuator(_maxGen), continuator(defaultGenContinuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval), selectMany(_archive, _max), transform(_crossover, _pCross, _mutation, _pMut), selectTransform(selectMany, transform), breed (selectTransform), archive(_archive)
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||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval evaluation function
|
||||
* @param _crossover crossover
|
||||
* @param _pCross crossover probability
|
||||
* @param _mutation mutation
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||||
* @param _pMut mutation probability
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||||
* @param _archive archive
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||||
* @param _max the max size for the pop
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||||
*/
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||||
moeoASEEA (eoContinue < MOEOT > & _continuator, eoEvalFunc < MOEOT > & _eval, eoQuadOp < MOEOT > & _crossover, double _pCross, eoMonOp < MOEOT > & _mutation, double _pMut, moeoArchive < MOEOT > & _archive, unsigned int _max) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval), selectMany(_archive, _max), transform(_crossover, _pCross, _mutation, _pMut), selectTransform(selectMany, transform), breed(selectTransform), archive(_archive)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue, a eoPopEval.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _popEval population evaluation function
|
||||
* @param _crossover crossover
|
||||
* @param _pCross crossover probability
|
||||
* @param _mutation mutation
|
||||
* @param _pMut mutation probability
|
||||
* @param _archive archive
|
||||
* @param _max the max size for the pop
|
||||
*/
|
||||
moeoASEEA (eoContinue < MOEOT > & _continuator, eoPopEvalFunc < MOEOT > & _popEval, eoQuadOp < MOEOT > & _crossover, double _pCross, eoMonOp < MOEOT > & _mutation, double _pMut, moeoArchive < MOEOT > & _archive, unsigned int _max) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(defaultEval), defaultPopEval(eval), popEval(_popEval), selectMany(_archive, _max), transform(_crossover, _pCross, _mutation, _pMut), selectTransform(selectMany, transform), breed(selectTransform), archive(_archive)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue and a eoTransform.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval evaluation function
|
||||
* @param _transform variation operator
|
||||
* @param _archive archive
|
||||
* @param _max the max size for the pop
|
||||
*/
|
||||
moeoASEEA (eoContinue < MOEOT > & _continuator, eoEvalFunc < MOEOT > & _eval, eoTransform < MOEOT > & _transform, moeoArchive < MOEOT > & _archive, unsigned int _max) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval), selectMany(_archive, _max), transform(defaultQuadOp, 0.0, defaultMonOp, 0.0), selectTransform(selectMany, _transform), breed(selectTransform), archive(_archive)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue, a eoPopEval and a eoTransform.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _popEval population evaluation function
|
||||
* @param _transform variation operator
|
||||
* @param _archive archive
|
||||
* @param _max the max size for the pop
|
||||
*/
|
||||
moeoASEEA (eoContinue < MOEOT > & _continuator, eoPopEvalFunc < MOEOT > & _popEval, eoTransform < MOEOT > & _transform, moeoArchive < MOEOT > & _archive, unsigned int _max) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(defaultEval), defaultPopEval(eval), popEval(_popEval), selectMany(_archive, _max), transform(defaultQuadOp, 0.0, defaultMonOp, 0.0), selectTransform(selectMany, _transform), breed(selectTransform), archive(_archive)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Apply a few generation of evolution to the population _pop until the stopping criteria is verified.
|
||||
* @param _pop the population
|
||||
*/
|
||||
virtual void operator () (eoPop < MOEOT > &_pop)
|
||||
{
|
||||
eoPop < MOEOT > empty_pop, offspring;
|
||||
popEval (empty_pop, _pop); // a first eval of _pop
|
||||
archive(_pop); // archive update
|
||||
while (continuator (_pop))
|
||||
{
|
||||
// generate offspring
|
||||
breed (_pop, offspring);
|
||||
popEval (_pop, offspring); // eval of offspring
|
||||
// archive (_pop); // archive update
|
||||
archive (offspring); // archive update
|
||||
_pop.resize(0);
|
||||
offspring.resize(0);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
protected:
|
||||
|
||||
/** default eval */
|
||||
class DummyEval : public eoEvalFunc < MOEOT >{
|
||||
public:
|
||||
void operator()(MOEOT &) {}
|
||||
}defaultEval;
|
||||
|
||||
/** default transform */
|
||||
class DummyTransform : public eoTransform < MOEOT >{
|
||||
public :
|
||||
void operator()(eoPop<MOEOT>&) {}
|
||||
}defaultTransform;
|
||||
|
||||
/** a continuator based on the number of generations (used as default) */
|
||||
eoGenContinue < MOEOT > defaultGenContinuator;
|
||||
/** stopping criteria */
|
||||
eoContinue < MOEOT > & continuator;
|
||||
/** evaluation function */
|
||||
eoEvalFunc < MOEOT > & eval;
|
||||
/** default popEval */
|
||||
eoPopLoopEval < MOEOT > defaultPopEval;
|
||||
/** evaluation function used to evaluate the whole population */
|
||||
eoPopEvalFunc < MOEOT > & popEval;
|
||||
/** default select many */
|
||||
moeoDetArchiveSelect < MOEOT > selectMany; // A REMPLACER !!!!!!!!!!! => add/moeoDetArchiveSelect.h
|
||||
/** eoTransform */
|
||||
eoSGATransform < MOEOT > transform;
|
||||
/** select transform */
|
||||
eoSelectTransform < MOEOT > selectTransform;
|
||||
/** a default crossover */
|
||||
eoQuadCloneOp < MOEOT > defaultQuadOp;
|
||||
/** a default mutation */
|
||||
eoMonCloneOp < MOEOT > defaultMonOp;
|
||||
/** an object for genetic operators (used as default) */
|
||||
//eoSGAGenOp < MOEOT > defaultSGAGenOp;
|
||||
/** an object for genetic operators (used as default) */
|
||||
//eoSGAGenOp < MOEOT >& genOp;
|
||||
/** breeder */
|
||||
eoBreed < MOEOT > & breed;
|
||||
/**archive */
|
||||
moeoArchive < MOEOT > & archive;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOASEEA_H_*/
|
||||
47
trunk/moeo/src/algo/moeoAlgo.h
Normal file
47
trunk/moeo/src/algo/moeoAlgo.h
Normal file
|
|
@ -0,0 +1,47 @@
|
|||
/*
|
||||
* <moeoAlgo.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOALGO_H_
|
||||
#define MOEOALGO_H_
|
||||
|
||||
/**
|
||||
* Abstract class for multi-objective algorithms.
|
||||
*/
|
||||
class moeoAlgo
|
||||
{};
|
||||
|
||||
#endif /*MOEOALGO_H_*/
|
||||
50
trunk/moeo/src/algo/moeoEA.h
Normal file
50
trunk/moeo/src/algo/moeoEA.h
Normal file
|
|
@ -0,0 +1,50 @@
|
|||
/*
|
||||
* <moeoEA.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOEA_H_
|
||||
#define MOEOEA_H_
|
||||
|
||||
#include <algo/moeoPopAlgo.h>
|
||||
|
||||
/**
|
||||
* Abstract class for multi-objective evolutionary algorithms.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoEA : public moeoPopAlgo < MOEOT >
|
||||
{};
|
||||
|
||||
#endif /*MOEOEA_H_*/
|
||||
217
trunk/moeo/src/algo/moeoEasyEA.h
Executable file
217
trunk/moeo/src/algo/moeoEasyEA.h
Executable file
|
|
@ -0,0 +1,217 @@
|
|||
/*
|
||||
* <moeoEasyEA.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef _MOEOEASYEA_H
|
||||
#define _MOEOEASYEA_H
|
||||
|
||||
#include <apply.h>
|
||||
#include <eoBreed.h>
|
||||
#include <eoContinue.h>
|
||||
#include <eoMergeReduce.h>
|
||||
#include <eoPopEvalFunc.h>
|
||||
#include <eoSelect.h>
|
||||
#include <eoTransform.h>
|
||||
#include <algo/moeoEA.h>
|
||||
#include <diversity/moeoDiversityAssignment.h>
|
||||
#include <diversity/moeoDummyDiversityAssignment.h>
|
||||
#include <fitness/moeoFitnessAssignment.h>
|
||||
#include <replacement/moeoReplacement.h>
|
||||
|
||||
/**
|
||||
* An easy class to design multi-objective evolutionary algorithms.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoEasyEA: public moeoEA < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Ctor taking a breed.
|
||||
* @param _continuator the stopping criteria
|
||||
* @param _eval the evaluation functions
|
||||
* @param _breed the breeder
|
||||
* @param _replace the replacement strategy
|
||||
* @param _fitnessEval the fitness evaluation scheme
|
||||
* @param _diversityEval the diversity evaluation scheme
|
||||
* @param _evalFitAndDivBeforeSelection put this parameter to 'true' if you want to re-evalue the fitness and the diversity of the population before the selection process
|
||||
*/
|
||||
moeoEasyEA(eoContinue < MOEOT > & _continuator, eoEvalFunc < MOEOT > & _eval, eoBreed < MOEOT > & _breed, moeoReplacement < MOEOT > & _replace, moeoFitnessAssignment < MOEOT > & _fitnessEval, moeoDiversityAssignment < MOEOT > & _diversityEval, bool _evalFitAndDivBeforeSelection = false) :
|
||||
continuator(_continuator), eval (_eval), loopEval(_eval), popEval(loopEval), selectTransform(dummySelect, dummyTransform), breed(_breed), replace(_replace), fitnessEval(_fitnessEval), diversityEval(_diversityEval), evalFitAndDivBeforeSelection(_evalFitAndDivBeforeSelection)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor taking a breed and a popEval.
|
||||
* @param _continuator the stopping criteria
|
||||
* @param _popEval the evaluation functions for the whole population
|
||||
* @param _breed the breeder
|
||||
* @param _replace the replacement strategy
|
||||
* @param _fitnessEval the fitness evaluation scheme
|
||||
* @param _diversityEval the diversity evaluation scheme
|
||||
* @param _evalFitAndDivBeforeSelection put this parameter to 'true' if you want to re-evalue the fitness and the diversity of the population before the selection process
|
||||
*/
|
||||
moeoEasyEA(eoContinue < MOEOT > & _continuator, eoPopEvalFunc < MOEOT > & _popEval, eoBreed < MOEOT > & _breed, moeoReplacement < MOEOT > & _replace, moeoFitnessAssignment < MOEOT > & _fitnessEval, moeoDiversityAssignment < MOEOT > & _diversityEval, bool _evalFitAndDivBeforeSelection = false) :
|
||||
continuator(_continuator), eval(dummyEval), loopEval(dummyEval), popEval(_popEval), selectTransform(dummySelect, dummyTransform), breed(_breed), replace(_replace), fitnessEval(_fitnessEval), diversityEval(_diversityEval), evalFitAndDivBeforeSelection(_evalFitAndDivBeforeSelection)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor taking a select and a transform.
|
||||
* @param _continuator the stopping criteria
|
||||
* @param _eval the evaluation functions
|
||||
* @param _select the selection scheme
|
||||
* @param _transform the tranformation scheme
|
||||
* @param _replace the replacement strategy
|
||||
* @param _fitnessEval the fitness evaluation scheme
|
||||
* @param _diversityEval the diversity evaluation scheme
|
||||
* @param _evalFitAndDivBeforeSelection put this parameter to 'true' if you want to re-evalue the fitness and the diversity of the population before the selection process
|
||||
*/
|
||||
moeoEasyEA(eoContinue < MOEOT > & _continuator, eoEvalFunc < MOEOT > & _eval, eoSelect < MOEOT > & _select, eoTransform < MOEOT > & _transform, moeoReplacement < MOEOT > & _replace, moeoFitnessAssignment < MOEOT > & _fitnessEval, moeoDiversityAssignment < MOEOT > & _diversityEval, bool _evalFitAndDivBeforeSelection = false) :
|
||||
continuator(_continuator), eval(_eval), loopEval(_eval), popEval(loopEval), selectTransform(_select, _transform), breed(selectTransform), replace(_replace), fitnessEval(_fitnessEval), diversityEval(_diversityEval), evalFitAndDivBeforeSelection(_evalFitAndDivBeforeSelection)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor taking a select, a transform.and a popEval
|
||||
* @param _continuator the stopping criteria
|
||||
* @param _popEval the evaluation functions
|
||||
* @param _select the selection scheme
|
||||
* @param _transform the tranformation scheme
|
||||
* @param _replace the replacement strategy
|
||||
* @param _fitnessEval the fitness evaluation scheme
|
||||
* @param _diversityEval the diversity evaluation scheme
|
||||
* @param _evalFitAndDivBeforeSelection put this parameter to 'true' if you want to re-evalue the fitness and the diversity of the population before the selection process
|
||||
*/
|
||||
moeoEasyEA(eoContinue < MOEOT > & _continuator, eoPopEvalFunc < MOEOT > & _popEval, eoSelect < MOEOT > & _select, eoTransform < MOEOT > & _transform, moeoReplacement < MOEOT > & _replace, moeoFitnessAssignment < MOEOT > & _fitnessEval, moeoDiversityAssignment < MOEOT > & _diversityEval, bool _evalFitAndDivBeforeSelection = false) :
|
||||
continuator(_continuator), eval(dummyEval), loopEval(dummyEval), popEval(_popEval), selectTransform(_select, _transform), breed(selectTransform), replace(_replace), fitnessEval(_fitnessEval), diversityEval(_diversityEval), evalFitAndDivBeforeSelection(_evalFitAndDivBeforeSelection)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Applies a few generation of evolution to the population _pop.
|
||||
* @param _pop the population
|
||||
*/
|
||||
virtual void operator()(eoPop < MOEOT > & _pop)
|
||||
{
|
||||
eoPop < MOEOT > offspring, empty_pop;
|
||||
popEval(empty_pop, _pop); // A first eval of pop.
|
||||
bool firstTime = true;
|
||||
do
|
||||
{
|
||||
try
|
||||
{
|
||||
unsigned int pSize = _pop.size();
|
||||
offspring.clear(); // new offspring
|
||||
// fitness and diversity assignment (if you want to or if it is the first generation)
|
||||
if (evalFitAndDivBeforeSelection || firstTime)
|
||||
{
|
||||
firstTime = false;
|
||||
//std::cout << "fitness eval" << std::endl;
|
||||
fitnessEval(_pop);
|
||||
//std::cout << "diversity eval" << std::endl;
|
||||
diversityEval(_pop);
|
||||
}
|
||||
breed(_pop, offspring);
|
||||
popEval(_pop, offspring); // eval of parents + offspring if necessary
|
||||
replace(_pop, offspring); // after replace, the new pop. is in _pop
|
||||
if (pSize > _pop.size())
|
||||
{
|
||||
throw std::runtime_error("Population shrinking!");
|
||||
}
|
||||
else if (pSize < _pop.size())
|
||||
{
|
||||
throw std::runtime_error("Population growing!");
|
||||
}
|
||||
}
|
||||
catch (std::exception& e)
|
||||
{
|
||||
std::string s = e.what();
|
||||
s.append( " in moeoEasyEA");
|
||||
throw std::runtime_error( s );
|
||||
}
|
||||
}
|
||||
while (continuator(_pop));
|
||||
}
|
||||
|
||||
|
||||
protected:
|
||||
|
||||
/** the stopping criteria */
|
||||
eoContinue < MOEOT > & continuator;
|
||||
/** a dummy eval */
|
||||
class eoDummyEval : public eoEvalFunc < MOEOT >
|
||||
{
|
||||
public:
|
||||
void operator()(MOEOT &) {}
|
||||
}
|
||||
dummyEval;
|
||||
/** the evaluation functions */
|
||||
eoEvalFunc < MOEOT > & eval;
|
||||
/** to evaluate the whole population */
|
||||
eoPopLoopEval < MOEOT > loopEval;
|
||||
/** to evaluate the whole population */
|
||||
eoPopEvalFunc < MOEOT > & popEval;
|
||||
/** dummy select */
|
||||
class DummySelect : public eoSelect < MOEOT >
|
||||
{
|
||||
public :
|
||||
void operator()(const eoPop<MOEOT>&, eoPop<MOEOT>&) {}
|
||||
}
|
||||
dummySelect;
|
||||
/** breed: a select followed by a transform */
|
||||
eoSelectTransform < MOEOT > selectTransform;
|
||||
/** dummy transform */
|
||||
class DummyTransform : public eoTransform < MOEOT >
|
||||
{
|
||||
public :
|
||||
void operator()(eoPop<MOEOT>&) {}
|
||||
}
|
||||
dummyTransform;
|
||||
/** the breeder */
|
||||
eoBreed < MOEOT > & breed;
|
||||
/** the replacment strategy */
|
||||
moeoReplacement < MOEOT > & replace;
|
||||
/** the fitness assignment strategy */
|
||||
moeoFitnessAssignment < MOEOT > & fitnessEval;
|
||||
/** the diversity assignment strategy */
|
||||
moeoDiversityAssignment < MOEOT > & diversityEval;
|
||||
/** if this parameter is set to 'true', the fitness and the diversity of the whole population will be re-evaluated before the selection process */
|
||||
bool evalFitAndDivBeforeSelection;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOEASYEA_H_*/
|
||||
225
trunk/moeo/src/algo/moeoIBEA.h
Normal file
225
trunk/moeo/src/algo/moeoIBEA.h
Normal file
|
|
@ -0,0 +1,225 @@
|
|||
/*
|
||||
* <moeoIBEA.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOIBEA_H_
|
||||
#define MOEOIBEA_H_
|
||||
|
||||
#include <eoBreed.h>
|
||||
#include <eoCloneOps.h>
|
||||
#include <eoContinue.h>
|
||||
#include <eoEvalFunc.h>
|
||||
#include <eoGenContinue.h>
|
||||
#include <eoGeneralBreeder.h>
|
||||
#include <eoGenOp.h>
|
||||
#include <eoPopEvalFunc.h>
|
||||
#include <eoSGAGenOp.h>
|
||||
#include <algo/moeoEA.h>
|
||||
#include <diversity/moeoDummyDiversityAssignment.h>
|
||||
#include <fitness/moeoExpBinaryIndicatorBasedFitnessAssignment.h>
|
||||
#include <metric/moeoNormalizedSolutionVsSolutionBinaryMetric.h>
|
||||
#include <replacement/moeoEnvironmentalReplacement.h>
|
||||
#include <selection/moeoDetTournamentSelect.h>
|
||||
|
||||
/**
|
||||
* IBEA (Indicator-Based Evolutionary Algorithm).
|
||||
* E. Zitzler, S. Künzli, "Indicator-Based Selection in Multiobjective Search", Proc. 8th International Conference on Parallel Problem Solving from Nature (PPSN VIII), pp. 832-842, Birmingham, UK (2004).
|
||||
* This class builds the IBEA algorithm only by using the fine-grained components of the ParadisEO-MOEO framework.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoIBEA : public moeoEA < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/** The type of objective vector */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a crossover, a mutation and their corresponding rates.
|
||||
* @param _maxGen maximum number of generations before stopping
|
||||
* @param _eval evaluation function
|
||||
* @param _crossover crossover
|
||||
* @param _pCross crossover probability
|
||||
* @param _mutation mutation
|
||||
* @param _pMut mutation probability
|
||||
* @param _metric metric
|
||||
* @param _kappa scaling factor kappa
|
||||
*/
|
||||
moeoIBEA (unsigned int _maxGen, eoEvalFunc < MOEOT > & _eval, eoQuadOp < MOEOT > & _crossover, double _pCross, eoMonOp < MOEOT > & _mutation, double _pMut, moeoNormalizedSolutionVsSolutionBinaryMetric < ObjectiveVector, double > & _metric, const double _kappa=0.05) :
|
||||
defaultGenContinuator(_maxGen), continuator(defaultGenContinuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval), select (2), selectMany(select,0.0), selectTransform(defaultSelect, defaultTransform), defaultSGAGenOp(_crossover, _pCross, _mutation, _pMut), genBreed (select, defaultSGAGenOp), breed (genBreed), fitnessAssignment(_metric, _kappa), replace (fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue and a eoGenOp.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval evaluation function
|
||||
* @param _op variation operators
|
||||
* @param _metric metric
|
||||
* @param _kappa scaling factor kappa
|
||||
*/
|
||||
moeoIBEA (eoContinue < MOEOT > & _continuator, eoEvalFunc < MOEOT > & _eval, eoGenOp < MOEOT > & _op, moeoNormalizedSolutionVsSolutionBinaryMetric < ObjectiveVector, double > & _metric, const double _kappa=0.05) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval), select(2),
|
||||
selectMany(select,0.0), selectTransform(defaultSelect, defaultTransform), defaultSGAGenOp(defaultQuadOp, 1.0, defaultMonOp, 1.0), genBreed(select, _op), breed(genBreed), fitnessAssignment(_metric, _kappa), replace (fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue, a eoPopEval and a eoGenOp.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _popEval population evaluation function
|
||||
* @param _op variation operators
|
||||
* @param _metric metric
|
||||
* @param _kappa scaling factor kappa
|
||||
*/
|
||||
moeoIBEA (eoContinue < MOEOT > & _continuator, eoPopEvalFunc < MOEOT > & _popEval, eoGenOp < MOEOT > & _op, moeoNormalizedSolutionVsSolutionBinaryMetric < ObjectiveVector, double > & _metric, const double _kappa=0.05) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(defaultEval), defaultPopEval(eval), popEval(_popEval), select(2),
|
||||
selectMany(select,0.0), selectTransform(defaultSelect, defaultTransform), defaultSGAGenOp(defaultQuadOp, 1.0, defaultMonOp, 1.0), genBreed(select, _op), breed(genBreed), fitnessAssignment(_metric, _kappa), replace (fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue and a eoTransform.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval evaluation function
|
||||
* @param _transform variation operator
|
||||
* @param _metric metric
|
||||
* @param _kappa scaling factor kappa
|
||||
*/
|
||||
moeoIBEA (eoContinue < MOEOT > & _continuator, eoEvalFunc < MOEOT > & _eval, eoTransform < MOEOT > & _transform, moeoNormalizedSolutionVsSolutionBinaryMetric < ObjectiveVector, double > & _metric, const double _kappa=0.05) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval),
|
||||
select(2), selectMany(select, 1.0), selectTransform(selectMany, _transform), defaultSGAGenOp(defaultQuadOp, 0.0, defaultMonOp, 0.0), genBreed(select, defaultSGAGenOp), breed(selectTransform), fitnessAssignment(_metric, _kappa), replace(fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue, a eoPopEval and a eoTransform.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _popEval population evaluation function
|
||||
* @param _transform variation operator
|
||||
* @param _metric metric
|
||||
* @param _kappa scaling factor kappa
|
||||
*/
|
||||
moeoIBEA (eoContinue < MOEOT > & _continuator, eoPopEvalFunc < MOEOT > & _popEval, eoTransform < MOEOT > & _transform, moeoNormalizedSolutionVsSolutionBinaryMetric < ObjectiveVector, double > & _metric, const double _kappa=0.05) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(defaultEval), defaultPopEval(eval), popEval(_popEval),
|
||||
select(2), selectMany(select, 1.0), selectTransform(selectMany, _transform), defaultSGAGenOp(defaultQuadOp, 0.0, defaultMonOp, 0.0), genBreed(select, defaultSGAGenOp), breed(selectTransform), fitnessAssignment(_metric, _kappa), replace(fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Apply the algorithm to the population _pop until the stopping criteria is satified.
|
||||
* @param _pop the population
|
||||
*/
|
||||
virtual void operator () (eoPop < MOEOT > &_pop)
|
||||
{
|
||||
eoPop < MOEOT > offspring, empty_pop;
|
||||
popEval (empty_pop, _pop); // a first eval of _pop
|
||||
// evaluate fitness and diversity
|
||||
fitnessAssignment(_pop);
|
||||
diversityAssignment(_pop);
|
||||
do
|
||||
{
|
||||
// generate offspring, worths are recalculated if necessary
|
||||
breed (_pop, offspring);
|
||||
// eval of offspring
|
||||
popEval (_pop, offspring);
|
||||
// after replace, the new pop is in _pop. Worths are recalculated if necessary
|
||||
replace (_pop, offspring);
|
||||
}
|
||||
while (continuator (_pop));
|
||||
}
|
||||
|
||||
|
||||
protected:
|
||||
|
||||
/** a continuator based on the number of generations (used as default) */
|
||||
eoGenContinue < MOEOT > defaultGenContinuator;
|
||||
/** stopping criteria */
|
||||
eoContinue < MOEOT > & continuator;
|
||||
/** default eval */
|
||||
class DummyEval : public eoEvalFunc < MOEOT >
|
||||
{
|
||||
public:
|
||||
void operator()(MOEOT &) {}
|
||||
}
|
||||
defaultEval;
|
||||
/** evaluation function */
|
||||
eoEvalFunc < MOEOT > & eval;
|
||||
/** default popEval */
|
||||
eoPopLoopEval < MOEOT > defaultPopEval;
|
||||
/** evaluation function used to evaluate the whole population */
|
||||
eoPopEvalFunc < MOEOT > & popEval;
|
||||
/** default select */
|
||||
class DummySelect : public eoSelect < MOEOT >
|
||||
{
|
||||
public :
|
||||
void operator()(const eoPop<MOEOT>&, eoPop<MOEOT>&) {}
|
||||
}
|
||||
defaultSelect;
|
||||
/** binary tournament selection */
|
||||
moeoDetTournamentSelect < MOEOT > select;
|
||||
/** default select many */
|
||||
eoSelectMany < MOEOT > selectMany;
|
||||
/** select transform */
|
||||
eoSelectTransform < MOEOT > selectTransform;
|
||||
/** a default crossover */
|
||||
eoQuadCloneOp < MOEOT > defaultQuadOp;
|
||||
/** a default mutation */
|
||||
eoMonCloneOp < MOEOT > defaultMonOp;
|
||||
/** an object for genetic operators (used as default) */
|
||||
eoSGAGenOp < MOEOT > defaultSGAGenOp;
|
||||
/** default transform */
|
||||
class DummyTransform : public eoTransform < MOEOT >
|
||||
{
|
||||
public :
|
||||
void operator()(eoPop<MOEOT>&) {}
|
||||
}
|
||||
defaultTransform;
|
||||
/** general breeder */
|
||||
eoGeneralBreeder < MOEOT > genBreed;
|
||||
/** breeder */
|
||||
eoBreed < MOEOT > & breed;
|
||||
/** fitness assignment used in IBEA */
|
||||
moeoExpBinaryIndicatorBasedFitnessAssignment < MOEOT > fitnessAssignment;
|
||||
/** dummy diversity assignment */
|
||||
moeoDummyDiversityAssignment < MOEOT > diversityAssignment;
|
||||
/** environmental replacement */
|
||||
moeoEnvironmentalReplacement < MOEOT > replace;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOIBEA_H_*/
|
||||
213
trunk/moeo/src/algo/moeoMOGA.h
Normal file
213
trunk/moeo/src/algo/moeoMOGA.h
Normal file
|
|
@ -0,0 +1,213 @@
|
|||
/*
|
||||
* <moeoNSGA.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOMOGA_H_
|
||||
#define MOEOMOGA_H_
|
||||
|
||||
#include <eoBreed.h>
|
||||
#include <eoContinue.h>
|
||||
#include <eoEvalFunc.h>
|
||||
#include <eoGenContinue.h>
|
||||
#include <eoGeneralBreeder.h>
|
||||
#include <eoGenOp.h>
|
||||
#include <eoPopEvalFunc.h>
|
||||
#include <eoSGAGenOp.h>
|
||||
#include <algo/moeoEA.h>
|
||||
#include <diversity/moeoFrontByFrontSharingDiversityAssignment.h>
|
||||
#include <fitness/moeoDominanceRankFitnessAssignment.h>
|
||||
#include <replacement/moeoElitistReplacement.h>
|
||||
#include <selection/moeoDetTournamentSelect.h>
|
||||
|
||||
/**
|
||||
* MOGA.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoMOGA: public moeoEA < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Ctor with a crossover, a mutation and their corresponding rates.
|
||||
* @param _maxGen maximum number of generations before stopping
|
||||
* @param _eval evaluation function
|
||||
* @param _crossover crossover
|
||||
* @param _pCross crossover probability
|
||||
* @param _mutation mutation
|
||||
* @param _pMut mutation probability
|
||||
* @param _nicheSize niche size
|
||||
*/
|
||||
moeoMOGA (unsigned int _maxGen, eoEvalFunc < MOEOT > & _eval, eoQuadOp < MOEOT > & _crossover, double _pCross, eoMonOp < MOEOT > & _mutation, double _pMut, double _nicheSize = 0.5) :
|
||||
defaultGenContinuator(_maxGen), continuator(defaultGenContinuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval), select (2), selectMany(select,0.0), selectTransform(defaultSelect, defaultTransform), defaultSGAGenOp(_crossover, _pCross, _mutation, _pMut), genBreed (select, defaultSGAGenOp), breed (genBreed), diversityAssignment(_nicheSize), replace (fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue and a eoGenOp.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval evaluation function
|
||||
* @param _op variation operators
|
||||
* @param _nicheSize niche size
|
||||
*/
|
||||
moeoMOGA (eoContinue < MOEOT > & _continuator, eoEvalFunc < MOEOT > & _eval, eoGenOp < MOEOT > & _op, double _nicheSize = 0.5) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval), select(2),
|
||||
selectMany(select,0.0), selectTransform(defaultSelect, defaultTransform), defaultSGAGenOp(defaultQuadOp, 1.0, defaultMonOp, 1.0), genBreed(select, _op), breed(genBreed), diversityAssignment(_nicheSize), replace (fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue, a eoPopEval and a eoGenOp.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _popEval population evaluation function
|
||||
* @param _op variation operators
|
||||
* @param _nicheSize niche size
|
||||
*/
|
||||
moeoMOGA (eoContinue < MOEOT > & _continuator, eoPopEvalFunc < MOEOT > & _popEval, eoGenOp < MOEOT > & _op, double _nicheSize = 0.5) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(defaultEval), defaultPopEval(eval), popEval(_popEval), select(2),
|
||||
selectMany(select,0.0), selectTransform(defaultSelect, defaultTransform), defaultSGAGenOp(defaultQuadOp, 1.0, defaultMonOp, 1.0), genBreed(select, _op), breed(genBreed), diversityAssignment(_nicheSize), replace (fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue and a eoTransform.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval evaluation function
|
||||
* @param _transform variation operator
|
||||
* @param _nicheSize niche size
|
||||
*/
|
||||
moeoMOGA (eoContinue < MOEOT > & _continuator, eoEvalFunc < MOEOT > & _eval, eoTransform < MOEOT > & _transform, double _nicheSize = 0.5) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval),
|
||||
select(2), selectMany(select, 1.0), selectTransform(selectMany, _transform), defaultSGAGenOp(defaultQuadOp, 0.0, defaultMonOp, 0.0), genBreed(select, defaultSGAGenOp), breed(selectTransform), diversityAssignment(_nicheSize), replace(fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue, a eoPopEval and a eoTransform.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _popEval population evaluation function
|
||||
* @param _transform variation operator
|
||||
* @param _nicheSize niche size
|
||||
*/
|
||||
moeoMOGA (eoContinue < MOEOT > & _continuator, eoPopEvalFunc < MOEOT > & _popEval, eoTransform < MOEOT > & _transform, double _nicheSize = 0.5) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(defaultEval), defaultPopEval(eval), popEval(_popEval),
|
||||
select(2), selectMany(select, 1.0), selectTransform(selectMany, _transform), defaultSGAGenOp(defaultQuadOp, 0.0, defaultMonOp, 0.0), genBreed(select, defaultSGAGenOp), breed(selectTransform), diversityAssignment(_nicheSize), replace(fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Apply the algorithm to the population _pop until the stopping criteria is satified.
|
||||
* @param _pop the population
|
||||
*/
|
||||
virtual void operator () (eoPop < MOEOT > &_pop)
|
||||
{
|
||||
eoPop < MOEOT > offspring, empty_pop;
|
||||
popEval (empty_pop, _pop); // a first eval of _pop
|
||||
// evaluate fitness and diversity
|
||||
fitnessAssignment(_pop);
|
||||
diversityAssignment(_pop);
|
||||
do
|
||||
{
|
||||
// generate offspring, worths are recalculated if necessary
|
||||
breed (_pop, offspring);
|
||||
// eval of offspring
|
||||
popEval (_pop, offspring);
|
||||
// after replace, the new pop is in _pop. Worths are recalculated if necessary
|
||||
replace (_pop, offspring);
|
||||
}
|
||||
while (continuator (_pop));
|
||||
}
|
||||
|
||||
|
||||
protected:
|
||||
|
||||
/** a continuator based on the number of generations (used as default) */
|
||||
eoGenContinue < MOEOT > defaultGenContinuator;
|
||||
/** stopping criteria */
|
||||
eoContinue < MOEOT > & continuator;
|
||||
/** default eval */
|
||||
class DummyEval : public eoEvalFunc < MOEOT >
|
||||
{
|
||||
public:
|
||||
void operator()(MOEOT &) {}
|
||||
}
|
||||
defaultEval;
|
||||
/** evaluation function */
|
||||
eoEvalFunc < MOEOT > & eval;
|
||||
/** default popEval */
|
||||
eoPopLoopEval < MOEOT > defaultPopEval;
|
||||
/** evaluation function used to evaluate the whole population */
|
||||
eoPopEvalFunc < MOEOT > & popEval;
|
||||
/** default select */
|
||||
class DummySelect : public eoSelect < MOEOT >
|
||||
{
|
||||
public :
|
||||
void operator()(const eoPop<MOEOT>&, eoPop<MOEOT>&) {}
|
||||
}
|
||||
defaultSelect;
|
||||
/** binary tournament selection */
|
||||
moeoDetTournamentSelect < MOEOT > select;
|
||||
/** default select many */
|
||||
eoSelectMany < MOEOT > selectMany;
|
||||
/** select transform */
|
||||
eoSelectTransform < MOEOT > selectTransform;
|
||||
/** a default crossover */
|
||||
eoQuadCloneOp < MOEOT > defaultQuadOp;
|
||||
/** a default mutation */
|
||||
eoMonCloneOp < MOEOT > defaultMonOp;
|
||||
/** an object for genetic operators (used as default) */
|
||||
eoSGAGenOp < MOEOT > defaultSGAGenOp;
|
||||
/** default transform */
|
||||
class DummyTransform : public eoTransform < MOEOT >
|
||||
{
|
||||
public :
|
||||
void operator()(eoPop<MOEOT>&) {}
|
||||
}
|
||||
defaultTransform;
|
||||
/** general breeder */
|
||||
eoGeneralBreeder < MOEOT > genBreed;
|
||||
/** breeder */
|
||||
eoBreed < MOEOT > & breed;
|
||||
/** fitness assignment used in NSGA-II */
|
||||
moeoDominanceRankFitnessAssignment < MOEOT > fitnessAssignment;
|
||||
/** diversity assignment used in NSGA-II */
|
||||
moeoFrontByFrontSharingDiversityAssignment < MOEOT > diversityAssignment;
|
||||
/** elitist replacement */
|
||||
moeoElitistReplacement < MOEOT > replace;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOMOGA_H_*/
|
||||
215
trunk/moeo/src/algo/moeoNSGA.h
Normal file
215
trunk/moeo/src/algo/moeoNSGA.h
Normal file
|
|
@ -0,0 +1,215 @@
|
|||
/*
|
||||
* <moeoNSGA.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEONSGA_H_
|
||||
#define MOEONSGA_H_
|
||||
|
||||
#include <eoBreed.h>
|
||||
#include <eoContinue.h>
|
||||
#include <eoEvalFunc.h>
|
||||
#include <eoGenContinue.h>
|
||||
#include <eoGeneralBreeder.h>
|
||||
#include <eoGenOp.h>
|
||||
#include <eoPopEvalFunc.h>
|
||||
#include <eoSGAGenOp.h>
|
||||
#include <algo/moeoEA.h>
|
||||
#include <diversity/moeoFrontByFrontSharingDiversityAssignment.h>
|
||||
#include <fitness/moeoDominanceDepthFitnessAssignment.h>
|
||||
#include <replacement/moeoElitistReplacement.h>
|
||||
#include <selection/moeoDetTournamentSelect.h>
|
||||
|
||||
/**
|
||||
* NSGA (Non-dominated Sorting Genetic Algorithm).
|
||||
* N. Srinivas, K. Deb, "Multiobjective Optimization Using Nondominated Sorting in Genetic Algorithms".
|
||||
* Evolutionary Computation, Vol. 2(3), No 2, pp. 221-248 (1994).
|
||||
* This class builds the NSGA algorithm only by using the fine-grained components of the ParadisEO-MOEO framework.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoNSGA: public moeoEA < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Ctor with a crossover, a mutation and their corresponding rates.
|
||||
* @param _maxGen maximum number of generations before stopping
|
||||
* @param _eval evaluation function
|
||||
* @param _crossover crossover
|
||||
* @param _pCross crossover probability
|
||||
* @param _mutation mutation
|
||||
* @param _pMut mutation probability
|
||||
* @param _nicheSize niche size
|
||||
*/
|
||||
moeoNSGA (unsigned int _maxGen, eoEvalFunc < MOEOT > & _eval, eoQuadOp < MOEOT > & _crossover, double _pCross, eoMonOp < MOEOT > & _mutation, double _pMut, double _nicheSize = 0.5) :
|
||||
defaultGenContinuator(_maxGen), continuator(defaultGenContinuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval), select (2), selectMany(select,0.0), selectTransform(defaultSelect, defaultTransform), defaultSGAGenOp(_crossover, _pCross, _mutation, _pMut), genBreed (select, defaultSGAGenOp), breed (genBreed), diversityAssignment(_nicheSize), replace (fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue and a eoGenOp.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval evaluation function
|
||||
* @param _op variation operators
|
||||
* @param _nicheSize niche size
|
||||
*/
|
||||
moeoNSGA (eoContinue < MOEOT > & _continuator, eoEvalFunc < MOEOT > & _eval, eoGenOp < MOEOT > & _op, double _nicheSize = 0.5) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval), select(2),
|
||||
selectMany(select,0.0), selectTransform(defaultSelect, defaultTransform), defaultSGAGenOp(defaultQuadOp, 1.0, defaultMonOp, 1.0), genBreed(select, _op), breed(genBreed), diversityAssignment(_nicheSize), replace (fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue, a eoPopEval and a eoGenOp.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _popEval population evaluation function
|
||||
* @param _op variation operators
|
||||
* @param _nicheSize niche size
|
||||
*/
|
||||
moeoNSGA (eoContinue < MOEOT > & _continuator, eoPopEvalFunc < MOEOT > & _popEval, eoGenOp < MOEOT > & _op, double _nicheSize = 0.5) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(defaultEval), defaultPopEval(eval), popEval(_popEval), select(2),
|
||||
selectMany(select,0.0), selectTransform(defaultSelect, defaultTransform), defaultSGAGenOp(defaultQuadOp, 1.0, defaultMonOp, 1.0), genBreed(select, _op), breed(genBreed), diversityAssignment(_nicheSize), replace (fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue and a eoTransform.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval evaluation function
|
||||
* @param _transform variation operator
|
||||
* @param _nicheSize niche size
|
||||
*/
|
||||
moeoNSGA (eoContinue < MOEOT > & _continuator, eoEvalFunc < MOEOT > & _eval, eoTransform < MOEOT > & _transform, double _nicheSize = 0.5) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval),
|
||||
select(2), selectMany(select, 1.0), selectTransform(selectMany, _transform), defaultSGAGenOp(defaultQuadOp, 0.0, defaultMonOp, 0.0), genBreed(select, defaultSGAGenOp), breed(selectTransform), diversityAssignment(_nicheSize), replace(fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue, a eoPopEval and a eoTransform.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _popEval population evaluation function
|
||||
* @param _transform variation operator
|
||||
* @param _nicheSize niche size
|
||||
*/
|
||||
moeoNSGA (eoContinue < MOEOT > & _continuator, eoPopEvalFunc < MOEOT > & _popEval, eoTransform < MOEOT > & _transform, double _nicheSize = 0.5) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(defaultEval), defaultPopEval(eval), popEval(_popEval),
|
||||
select(2), selectMany(select, 1.0), selectTransform(selectMany, _transform), defaultSGAGenOp(defaultQuadOp, 0.0, defaultMonOp, 0.0), genBreed(select, defaultSGAGenOp), breed(selectTransform), diversityAssignment(_nicheSize), replace(fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Apply the algorithm to the population _pop until the stopping criteria is satified.
|
||||
* @param _pop the population
|
||||
*/
|
||||
virtual void operator () (eoPop < MOEOT > &_pop)
|
||||
{
|
||||
eoPop < MOEOT > offspring, empty_pop;
|
||||
popEval (empty_pop, _pop); // a first eval of _pop
|
||||
// evaluate fitness and diversity
|
||||
fitnessAssignment(_pop);
|
||||
diversityAssignment(_pop);
|
||||
do
|
||||
{
|
||||
// generate offspring, worths are recalculated if necessary
|
||||
breed (_pop, offspring);
|
||||
// eval of offspring
|
||||
popEval (_pop, offspring);
|
||||
// after replace, the new pop is in _pop. Worths are recalculated if necessary
|
||||
replace (_pop, offspring);
|
||||
}
|
||||
while (continuator (_pop));
|
||||
}
|
||||
|
||||
|
||||
protected:
|
||||
|
||||
/** a continuator based on the number of generations (used as default) */
|
||||
eoGenContinue < MOEOT > defaultGenContinuator;
|
||||
/** stopping criteria */
|
||||
eoContinue < MOEOT > & continuator;
|
||||
/** default eval */
|
||||
class DummyEval : public eoEvalFunc < MOEOT >
|
||||
{
|
||||
public:
|
||||
void operator()(MOEOT &) {}
|
||||
}
|
||||
defaultEval;
|
||||
/** evaluation function */
|
||||
eoEvalFunc < MOEOT > & eval;
|
||||
/** default popEval */
|
||||
eoPopLoopEval < MOEOT > defaultPopEval;
|
||||
/** evaluation function used to evaluate the whole population */
|
||||
eoPopEvalFunc < MOEOT > & popEval;
|
||||
/** default select */
|
||||
class DummySelect : public eoSelect < MOEOT >
|
||||
{
|
||||
public :
|
||||
void operator()(const eoPop<MOEOT>&, eoPop<MOEOT>&) {}
|
||||
}
|
||||
defaultSelect;
|
||||
/** binary tournament selection */
|
||||
moeoDetTournamentSelect < MOEOT > select;
|
||||
/** default select many */
|
||||
eoSelectMany < MOEOT > selectMany;
|
||||
/** select transform */
|
||||
eoSelectTransform < MOEOT > selectTransform;
|
||||
/** a default crossover */
|
||||
eoQuadCloneOp < MOEOT > defaultQuadOp;
|
||||
/** a default mutation */
|
||||
eoMonCloneOp < MOEOT > defaultMonOp;
|
||||
/** an object for genetic operators (used as default) */
|
||||
eoSGAGenOp < MOEOT > defaultSGAGenOp;
|
||||
/** default transform */
|
||||
class DummyTransform : public eoTransform < MOEOT >
|
||||
{
|
||||
public :
|
||||
void operator()(eoPop<MOEOT>&) {}
|
||||
}
|
||||
defaultTransform;
|
||||
/** general breeder */
|
||||
eoGeneralBreeder < MOEOT > genBreed;
|
||||
/** breeder */
|
||||
eoBreed < MOEOT > & breed;
|
||||
/** fitness assignment used in NSGA-II */
|
||||
moeoDominanceDepthFitnessAssignment < MOEOT > fitnessAssignment;
|
||||
/** diversity assignment used in NSGA-II */
|
||||
moeoFrontByFrontSharingDiversityAssignment < MOEOT > diversityAssignment;
|
||||
/** elitist replacement */
|
||||
moeoElitistReplacement < MOEOT > replace;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEONSGA_H_*/
|
||||
210
trunk/moeo/src/algo/moeoNSGAII.h
Normal file
210
trunk/moeo/src/algo/moeoNSGAII.h
Normal file
|
|
@ -0,0 +1,210 @@
|
|||
/*
|
||||
* <moeoNSGAII.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEONSGAII_H_
|
||||
#define MOEONSGAII_H_
|
||||
|
||||
#include <eoBreed.h>
|
||||
#include <eoCloneOps.h>
|
||||
#include <eoContinue.h>
|
||||
#include <eoEvalFunc.h>
|
||||
#include <eoGenContinue.h>
|
||||
#include <eoGeneralBreeder.h>
|
||||
#include <eoGenOp.h>
|
||||
#include <eoPopEvalFunc.h>
|
||||
#include <eoSGAGenOp.h>
|
||||
#include <algo/moeoEA.h>
|
||||
#include <diversity/moeoFrontByFrontCrowdingDiversityAssignment.h>
|
||||
#include <fitness/moeoDominanceDepthFitnessAssignment.h>
|
||||
#include <replacement/moeoElitistReplacement.h>
|
||||
#include <selection/moeoDetTournamentSelect.h>
|
||||
|
||||
/**
|
||||
* NSGA-II (Non-dominated Sorting Genetic Algorithm II).
|
||||
* Deb, K., S. Agrawal, A. Pratap, and T. Meyarivan. A fast elitist non-dominated sorting genetic algorithm for multi-objective optimization: NSGA-II. IEEE Transactions on Evolutionary Computation, Vol. 6, No 2, pp 182-197 (2002).
|
||||
* This class builds the NSGA-II algorithm only by using the fine-grained components of the ParadisEO-MOEO framework.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoNSGAII: public moeoEA < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Ctor with a crossover, a mutation and their corresponding rates.
|
||||
* @param _maxGen maximum number of generations before stopping
|
||||
* @param _eval evaluation function
|
||||
* @param _crossover crossover
|
||||
* @param _pCross crossover probability
|
||||
* @param _mutation mutation
|
||||
* @param _pMut mutation probability
|
||||
*/
|
||||
moeoNSGAII (unsigned int _maxGen, eoEvalFunc < MOEOT > & _eval, eoQuadOp < MOEOT > & _crossover, double _pCross, eoMonOp < MOEOT > & _mutation, double _pMut) :
|
||||
defaultGenContinuator(_maxGen), continuator(defaultGenContinuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval), select (2), selectMany(select,0.0), selectTransform(defaultSelect, defaultTransform), defaultSGAGenOp(_crossover, _pCross, _mutation, _pMut), genBreed (select, defaultSGAGenOp), breed (genBreed), replace (fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue and a eoGenOp.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval evaluation function
|
||||
* @param _op variation operators
|
||||
*/
|
||||
moeoNSGAII (eoContinue < MOEOT > & _continuator, eoEvalFunc < MOEOT > & _eval, eoGenOp < MOEOT > & _op) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval), select(2),
|
||||
selectMany(select,0.0), selectTransform(defaultSelect, defaultTransform), defaultSGAGenOp(defaultQuadOp, 1.0, defaultMonOp, 1.0), genBreed(select, _op), breed(genBreed), replace (fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue, a eoPopEval and a eoGenOp.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _popEval population evaluation function
|
||||
* @param _op variation operators
|
||||
*/
|
||||
moeoNSGAII (eoContinue < MOEOT > & _continuator, eoPopEvalFunc < MOEOT > & _popEval, eoGenOp < MOEOT > & _op) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(defaultEval), defaultPopEval(eval), popEval(_popEval), select(2),
|
||||
selectMany(select,0.0), selectTransform(defaultSelect, defaultTransform), defaultSGAGenOp(defaultQuadOp, 1.0, defaultMonOp, 1.0), genBreed(select, _op), breed(genBreed), replace (fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue and a eoTransform.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval evaluation function
|
||||
* @param _transform variation operator
|
||||
*/
|
||||
moeoNSGAII (eoContinue < MOEOT > & _continuator, eoEvalFunc < MOEOT > & _eval, eoTransform < MOEOT > & _transform) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval),
|
||||
select(2), selectMany(select, 1.0), selectTransform(selectMany, _transform), defaultSGAGenOp(defaultQuadOp, 0.0, defaultMonOp, 0.0), genBreed(select, defaultSGAGenOp), breed(selectTransform), replace(fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue, a eoPopEval and a eoTransform.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _popEval population evaluation function
|
||||
* @param _transform variation operator
|
||||
*/
|
||||
moeoNSGAII (eoContinue < MOEOT > & _continuator, eoPopEvalFunc < MOEOT > & _popEval, eoTransform < MOEOT > & _transform) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(defaultEval), defaultPopEval(eval), popEval(_popEval),
|
||||
select(2), selectMany(select, 1.0), selectTransform(selectMany, _transform), defaultSGAGenOp(defaultQuadOp, 0.0, defaultMonOp, 0.0), genBreed(select, defaultSGAGenOp), breed(selectTransform), replace(fitnessAssignment, diversityAssignment)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Apply a the algorithm to the population _pop until the stopping criteria is satified.
|
||||
* @param _pop the population
|
||||
*/
|
||||
virtual void operator () (eoPop < MOEOT > &_pop)
|
||||
{
|
||||
eoPop < MOEOT > offspring, empty_pop;
|
||||
popEval (empty_pop, _pop); // a first eval of _pop
|
||||
// evaluate fitness and diversity
|
||||
fitnessAssignment(_pop);
|
||||
diversityAssignment(_pop);
|
||||
do
|
||||
{
|
||||
// generate offspring, worths are recalculated if necessary
|
||||
breed (_pop, offspring);
|
||||
// eval of offspring
|
||||
popEval (_pop, offspring);
|
||||
// after replace, the new pop is in _pop. Worths are recalculated if necessary
|
||||
replace (_pop, offspring);
|
||||
}
|
||||
while (continuator (_pop));
|
||||
}
|
||||
|
||||
|
||||
protected:
|
||||
|
||||
/** a continuator based on the number of generations (used as default) */
|
||||
eoGenContinue < MOEOT > defaultGenContinuator;
|
||||
/** stopping criteria */
|
||||
eoContinue < MOEOT > & continuator;
|
||||
/** default eval */
|
||||
class DummyEval : public eoEvalFunc < MOEOT >
|
||||
{
|
||||
public:
|
||||
void operator()(MOEOT &) {}
|
||||
}
|
||||
defaultEval;
|
||||
/** evaluation function */
|
||||
eoEvalFunc < MOEOT > & eval;
|
||||
/** default popEval */
|
||||
eoPopLoopEval < MOEOT > defaultPopEval;
|
||||
/** evaluation function used to evaluate the whole population */
|
||||
eoPopEvalFunc < MOEOT > & popEval;
|
||||
/** default select */
|
||||
class DummySelect : public eoSelect < MOEOT >
|
||||
{
|
||||
public :
|
||||
void operator()(const eoPop<MOEOT>&, eoPop<MOEOT>&) {}
|
||||
}
|
||||
defaultSelect;
|
||||
/** binary tournament selection */
|
||||
moeoDetTournamentSelect < MOEOT > select;
|
||||
/** default select many */
|
||||
eoSelectMany < MOEOT > selectMany;
|
||||
/** select transform */
|
||||
eoSelectTransform < MOEOT > selectTransform;
|
||||
/** a default crossover */
|
||||
eoQuadCloneOp < MOEOT > defaultQuadOp;
|
||||
/** a default mutation */
|
||||
eoMonCloneOp < MOEOT > defaultMonOp;
|
||||
/** an object for genetic operators (used as default) */
|
||||
eoSGAGenOp < MOEOT > defaultSGAGenOp;
|
||||
/** default transform */
|
||||
class DummyTransform : public eoTransform < MOEOT >
|
||||
{
|
||||
public :
|
||||
void operator()(eoPop<MOEOT>&) {}
|
||||
}
|
||||
defaultTransform;
|
||||
/** general breeder */
|
||||
eoGeneralBreeder < MOEOT > genBreed;
|
||||
/** breeder */
|
||||
eoBreed < MOEOT > & breed;
|
||||
/** fitness assignment used in NSGA */
|
||||
moeoDominanceDepthFitnessAssignment < MOEOT > fitnessAssignment;
|
||||
/** diversity assignment used in NSGA-II */
|
||||
moeoFrontByFrontCrowdingDiversityAssignment < MOEOT > diversityAssignment;
|
||||
/** elitist replacement */
|
||||
moeoElitistReplacement < MOEOT > replace;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEONSGAII_H_*/
|
||||
87
trunk/moeo/src/algo/moeoPLS1.h
Normal file
87
trunk/moeo/src/algo/moeoPLS1.h
Normal file
|
|
@ -0,0 +1,87 @@
|
|||
/*
|
||||
* <moeoPLS1.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef _MOEOPLS1_H
|
||||
#define _MOEOPLS1_H
|
||||
|
||||
#include <algo/moeoUnifiedDominanceBasedLS.h>
|
||||
#include <selection/moeoNumberUnvisitedSelect.h>
|
||||
#include <explorer/moeoExhaustiveNeighborhoodExplorer.h>
|
||||
|
||||
/**
|
||||
* PLS1 algorithm
|
||||
*
|
||||
* Paquete L, Chiarandini M, St ̈ tzle T (2004) Pareto local optimum sets in the biobjective
|
||||
* traveling salesman problem: An experimental study. In: Metaheuristics for Multiobjective
|
||||
* Optimisation, Lecture Notes in Economics and Mathematical Systems, vol 535, Springer-
|
||||
* Verlag, Berlin, Germany, chap 7, pp 177–199
|
||||
*/
|
||||
template < class Neighbor >
|
||||
class moeoPLS1 : public moeoUnifiedDominanceBasedLS < Neighbor >
|
||||
{
|
||||
public:
|
||||
|
||||
/** Alias for the type */
|
||||
typedef typename Neighbor::EOT MOEOT;
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
/**
|
||||
* Ctor
|
||||
* @param _continuator a stop creterion
|
||||
* @param _eval a evaluation function
|
||||
* @param _archive a archive to store no-dominated individuals
|
||||
* @param _neighborhood a neighborhood
|
||||
* @param _incrEval neighbor evaluation function
|
||||
*/
|
||||
moeoPLS1(
|
||||
eoContinue < MOEOT > & _continuator,
|
||||
eoEvalFunc < MOEOT > & _eval,
|
||||
moeoArchive < MOEOT > & _archive,
|
||||
moNeighborhood<Neighbor>& _neighborhood,
|
||||
moEval < Neighbor > & _incrEval):
|
||||
moeoUnifiedDominanceBasedLS<Neighbor>(
|
||||
_continuator,
|
||||
_eval,
|
||||
_archive,
|
||||
*(new moeoExhaustiveNeighborhoodExplorer<Neighbor>(_neighborhood, _incrEval)),
|
||||
*(new moeoNumberUnvisitedSelect<MOEOT>(1))
|
||||
){}
|
||||
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOPLS1_H_*/
|
||||
95
trunk/moeo/src/algo/moeoPLS2.h
Normal file
95
trunk/moeo/src/algo/moeoPLS2.h
Normal file
|
|
@ -0,0 +1,95 @@
|
|||
/*
|
||||
* <moeoPLS2.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef _MOEOPLS2_H
|
||||
#define _MOEOPLS2_H
|
||||
|
||||
#include <algo/moeoUnifiedDominanceBasedLS.h>
|
||||
#include <selection/moeoExhaustiveUnvisitedSelect.h>
|
||||
#include <explorer/moeoExhaustiveNeighborhoodExplorer.h>
|
||||
|
||||
/**
|
||||
* PLS2 algorithm
|
||||
*
|
||||
* Talbi EG, Rahoual M, Mabed MH, Dhaenens C (2001) A hybrid evolutionary approach for
|
||||
* multicriteria optimization problems : Application to the fow shop. In: First International
|
||||
* Conference on Evolutionary Multi-criterion Optimization (EMO 2001), Springer-Verlag,
|
||||
* Zurich, Switzerland, Lecture Notes in Computer Science, vol 1993, pp 416–428
|
||||
*
|
||||
* Basseur M, Seynhaeve F, Talbi E (2003) Adaptive mechanisms for multiobjective evolution-
|
||||
* ary algorithms. In: Congress on Engineering in System Application (CESA 2003), Lille,
|
||||
* France, pp 72–86
|
||||
*
|
||||
* Angel E, Bampis E, Gourv ́ s L (2004) A dynasearch neighbohood for the bicriteria travel-
|
||||
* ing salesman problem. In: Metaheuristics for Multiobjective Optimisation, Lecture Notes
|
||||
* in Economics and Mathematical Systems, vol 535, Springer-Verlag, Berlin, Germany,
|
||||
* chap 6, pp 153–176
|
||||
*/
|
||||
template < class Neighbor >
|
||||
class moeoPLS2 : public moeoUnifiedDominanceBasedLS < Neighbor >
|
||||
{
|
||||
public:
|
||||
|
||||
/** Alias for the type */
|
||||
typedef typename Neighbor::EOT MOEOT;
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
/**
|
||||
* Ctor
|
||||
* @param _continuator a stop creterion
|
||||
* @param _eval a evaluation function
|
||||
* @param _archive a archive to store no-dominated individuals
|
||||
* @param _neighborhood a neighborhood
|
||||
* @param _incrEval neighbor evaluation function
|
||||
*/
|
||||
moeoPLS2(
|
||||
eoContinue < MOEOT > & _continuator,
|
||||
eoEvalFunc < MOEOT > & _eval,
|
||||
moeoArchive < MOEOT > & _archive,
|
||||
moNeighborhood<Neighbor>& _neighborhood,
|
||||
moEval < Neighbor > & _incrEval):
|
||||
moeoUnifiedDominanceBasedLS<Neighbor>(
|
||||
_continuator,
|
||||
_eval,
|
||||
_archive,
|
||||
*(new moeoExhaustiveNeighborhoodExplorer<Neighbor>(_neighborhood, _incrEval)),
|
||||
*(new moeoExhaustiveUnvisitedSelect<MOEOT>())
|
||||
){}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOPLS2_H_*/
|
||||
52
trunk/moeo/src/algo/moeoPopAlgo.h
Normal file
52
trunk/moeo/src/algo/moeoPopAlgo.h
Normal file
|
|
@ -0,0 +1,52 @@
|
|||
/*
|
||||
* <moeoPopAlgo.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOPOPALGO_H_
|
||||
#define MOEOPOPALGO_H_
|
||||
|
||||
#include <eoAlgo.h>
|
||||
#include <algo/moeoAlgo.h>
|
||||
|
||||
/**
|
||||
* Abstract class for population based multi-objective evolutionary algorithms.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoPopAlgo : public moeoAlgo, public eoAlgo < MOEOT >
|
||||
{};
|
||||
|
||||
#endif /*MOEOPOPALGO_H_*/
|
||||
50
trunk/moeo/src/algo/moeoPopLS.h
Executable file
50
trunk/moeo/src/algo/moeoPopLS.h
Executable file
|
|
@ -0,0 +1,50 @@
|
|||
/*
|
||||
* <moeoPopLS.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOPOPLS_H_
|
||||
#define MOEOPOPLS_H_
|
||||
|
||||
#include <algo/moeoPopAlgo.h>
|
||||
|
||||
/**
|
||||
* Abstract class for Population based multi-objective local search.
|
||||
*/
|
||||
template < class Neighborhhod >
|
||||
class moeoPopLS : public moeoPopAlgo < typename Neighborhhod::EOT > {};
|
||||
|
||||
#endif /*MOEOPOPLS_H_*/
|
||||
211
trunk/moeo/src/algo/moeoSEEA.h
Normal file
211
trunk/moeo/src/algo/moeoSEEA.h
Normal file
|
|
@ -0,0 +1,211 @@
|
|||
/*
|
||||
* <moeoSEEA.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Lille-Nord Europe, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
|
||||
#ifndef MOEOSEEA_H_
|
||||
#define MOEOSEEA_H_
|
||||
|
||||
#include <eoBreed.h>
|
||||
#include <eoCloneOps.h>
|
||||
#include <eoContinue.h>
|
||||
#include <eoEvalFunc.h>
|
||||
#include <eoGenContinue.h>
|
||||
#include <eoGeneralBreeder.h>
|
||||
#include <eoGenOp.h>
|
||||
#include <eoPopEvalFunc.h>
|
||||
#include <eoSGAGenOp.h>
|
||||
#include <algo/moeoEA.h>
|
||||
#include <archive/moeoArchive.h>
|
||||
#include <replacement/moeoGenerationalReplacement.h>
|
||||
#include <selection/moeoRandomSelect.h>
|
||||
#include <selection/moeoSelectFromPopAndArch.h>
|
||||
|
||||
/**
|
||||
* SEEA (Simple Elitist Evolutionary Algorithm).
|
||||
* Liefooghe A. Jourdan L., Talbi E.-G.. Metaheuristics and Their Hybridization to Solve the Bi-objective Ring Star Problem: a Comparative Study. Technical Report RR-6515, INRIA, 2008
|
||||
* This class builds SEEA by using the fine-grained components of the ParadisEO-MOEO framework.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoSEEA : public moeoEA < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Ctor with a crossover, a mutation and their corresponding rates.
|
||||
* @param _maxGen number of generations before stopping
|
||||
* @param _eval evaluation function
|
||||
* @param _crossover crossover
|
||||
* @param _pCross crossover probability
|
||||
* @param _mutation mutation
|
||||
* @param _pMut mutation probability
|
||||
* @param _archive archive
|
||||
*/
|
||||
moeoSEEA (unsigned int _maxGen, eoEvalFunc < MOEOT > & _eval, eoQuadOp < MOEOT > & _crossover, double _pCross, eoMonOp < MOEOT > & _mutation, double _pMut, moeoArchive < MOEOT > & _archive) :
|
||||
defaultGenContinuator(_maxGen), continuator(defaultGenContinuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval), select(randomSelect, _archive, 0.0), selectMany(select,0.0), selectTransform(defaultSelect, defaultTransform), defaultSGAGenOp(_crossover, _pCross, _mutation, _pMut), genBreed (select, defaultSGAGenOp), breed (genBreed), archive(_archive)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue and a eoGenOp.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval evaluation function
|
||||
* @param _op variation operators
|
||||
* @param _archive archive
|
||||
*/
|
||||
moeoSEEA (eoContinue < MOEOT > & _continuator, eoEvalFunc < MOEOT > & _eval, eoGenOp < MOEOT > & _op, moeoArchive < MOEOT > & _archive) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval), select(randomSelect, _archive, 0.0), selectMany(select,0.0), selectTransform(defaultSelect, defaultTransform), defaultSGAGenOp(defaultQuadOp, 1.0, defaultMonOp, 1.0), genBreed(select, _op), breed(genBreed), archive(_archive)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue, a eoPopEval and a eoGenOp.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _popEval population evaluation function
|
||||
* @param _op variation operators
|
||||
* @param _archive archive
|
||||
*/
|
||||
moeoSEEA (eoContinue < MOEOT > & _continuator, eoPopEvalFunc < MOEOT > & _popEval, eoGenOp < MOEOT > & _op, moeoArchive < MOEOT > & _archive) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(defaultEval), defaultPopEval(eval), popEval(_popEval), select(randomSelect, _archive, 0.0), selectMany(select,0.0), selectTransform(defaultSelect, defaultTransform), defaultSGAGenOp(defaultQuadOp, 1.0, defaultMonOp, 1.0), genBreed(select, _op), breed(genBreed), archive(_archive)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue and a eoTransform.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval evaluation function
|
||||
* @param _transform variation operator
|
||||
* @param _archive archive
|
||||
*/
|
||||
moeoSEEA (eoContinue < MOEOT > & _continuator, eoEvalFunc < MOEOT > & _eval, eoTransform < MOEOT > & _transform, moeoArchive < MOEOT > & _archive) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(_eval), defaultPopEval(_eval), popEval(defaultPopEval), select(randomSelect, _archive, 0.0), selectMany(select, 1.0), selectTransform(selectMany, _transform), defaultSGAGenOp(defaultQuadOp, 0.0, defaultMonOp, 0.0), genBreed(select, defaultSGAGenOp), breed(selectTransform), archive(_archive)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a eoContinue, a eoPopEval and a eoTransform.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _popEval population evaluation function
|
||||
* @param _transform variation operator
|
||||
* @param _archive archive
|
||||
*/
|
||||
moeoSEEA (eoContinue < MOEOT > & _continuator, eoPopEvalFunc < MOEOT > & _popEval, eoTransform < MOEOT > & _transform, moeoArchive < MOEOT > & _archive) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(defaultEval), defaultPopEval(eval), popEval(_popEval), select(randomSelect, _archive, 0.0), selectMany(select, 1.0), selectTransform(selectMany, _transform), defaultSGAGenOp(defaultQuadOp, 0.0, defaultMonOp, 0.0), genBreed(select, defaultSGAGenOp), breed(selectTransform), archive(_archive)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Apply a few generation of evolution to the population _pop until the stopping criteria is verified.
|
||||
* @param _pop the population
|
||||
*/
|
||||
virtual void operator () (eoPop < MOEOT > &_pop)
|
||||
{
|
||||
eoPop < MOEOT > empty_pop, offspring;
|
||||
popEval (empty_pop, _pop); // a first eval of _pop
|
||||
archive(_pop); // archive update
|
||||
while (continuator (_pop))
|
||||
{
|
||||
// generate offspring, worths are recalculated if necessary
|
||||
genBreed (_pop, offspring);
|
||||
|
||||
popEval (_pop, offspring); // eval of offspring
|
||||
// after replace, the new pop is in _pop
|
||||
// replace (_pop, offspring);
|
||||
// archive (_pop); // archive update
|
||||
archive(offspring);
|
||||
// _pop.resize(0);
|
||||
// offspring.resize(0);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
protected:
|
||||
|
||||
/** a continuator based on the number of generations (used as default) */
|
||||
eoGenContinue < MOEOT > defaultGenContinuator;
|
||||
/** stopping criteria */
|
||||
eoContinue < MOEOT > & continuator;
|
||||
/** default eval */
|
||||
class DummyEval : public eoEvalFunc < MOEOT >
|
||||
{
|
||||
public:
|
||||
void operator()(MOEOT &) {}
|
||||
}
|
||||
defaultEval;
|
||||
/** evaluation function */
|
||||
eoEvalFunc < MOEOT > & eval;
|
||||
/** default popEval */
|
||||
eoPopLoopEval < MOEOT > defaultPopEval;
|
||||
/** evaluation function used to evaluate the whole population */
|
||||
eoPopEvalFunc < MOEOT > & popEval;
|
||||
/** default select */
|
||||
class DummySelect : public eoSelect < MOEOT >
|
||||
{
|
||||
public :
|
||||
void operator()(const eoPop<MOEOT>&, eoPop<MOEOT>&) {}
|
||||
}
|
||||
defaultSelect;
|
||||
/** random select */
|
||||
moeoRandomSelect < MOEOT > randomSelect;
|
||||
/** elitist selection */
|
||||
moeoSelectFromPopAndArch < MOEOT > select;
|
||||
/** default select many */
|
||||
eoSelectMany < MOEOT > selectMany;
|
||||
/** select transform */
|
||||
eoSelectTransform < MOEOT > selectTransform;
|
||||
/** a default crossover */
|
||||
eoQuadCloneOp < MOEOT > defaultQuadOp;
|
||||
/** a default mutation */
|
||||
eoMonCloneOp < MOEOT > defaultMonOp;
|
||||
/** an object for genetic operators (used as default) */
|
||||
eoSGAGenOp < MOEOT > defaultSGAGenOp;
|
||||
/** default transform */
|
||||
class DummyTransform : public eoTransform < MOEOT >
|
||||
{
|
||||
public :
|
||||
void operator()(eoPop<MOEOT>&) {}
|
||||
}
|
||||
defaultTransform;
|
||||
/** general breeder */
|
||||
eoGeneralBreeder < MOEOT > genBreed;
|
||||
/** breeder */
|
||||
eoBreed < MOEOT > & breed;
|
||||
/** generational replacement */
|
||||
moeoGenerationalReplacement < MOEOT > replace;
|
||||
/**archive*/
|
||||
moeoArchive < MOEOT >& archive;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOSEEA_H_*/
|
||||
278
trunk/moeo/src/algo/moeoSPEA2.h
Normal file
278
trunk/moeo/src/algo/moeoSPEA2.h
Normal file
|
|
@ -0,0 +1,278 @@
|
|||
/*
|
||||
* <moeoSPEA2.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Lille-Nord Europe, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jeremie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
// moeoSPEA2.h
|
||||
//-----------------------------------------------------------------------------
|
||||
#ifndef MOEOSPEA2_H_
|
||||
#define MOEOSPEA2_H_
|
||||
|
||||
#include <eoBreed.h>
|
||||
#include <eoCloneOps.h>
|
||||
#include <eoContinue.h>
|
||||
#include <eoEvalFunc.h>
|
||||
#include <eoGenContinue.h>
|
||||
#include <eoGeneralBreeder.h>
|
||||
#include <eoGenOp.h>
|
||||
#include <eoPopEvalFunc.h>
|
||||
#include <eoSGAGenOp.h>
|
||||
#include <algo/moeoEA.h>
|
||||
#include <diversity/moeoNearestNeighborDiversityAssignment.h>
|
||||
#include <fitness/moeoDominanceCountFitnessAssignment.h>
|
||||
#include <fitness/moeoDominanceCountRankingFitnessAssignment.h>
|
||||
#include <replacement/moeoGenerationalReplacement.h>
|
||||
#include <selection/moeoDetTournamentSelect.h>
|
||||
#include <archive/moeoFixedSizeArchive.h>
|
||||
#include <distance/moeoEuclideanDistance.h>
|
||||
#include <selection/moeoSelectFromPopAndArch.h>
|
||||
|
||||
/**
|
||||
* SPEA2 algorithm.
|
||||
* E. Zitzler, M. Laumanns, and L. Thiele. SPEA2: Improving the Strength Pareto Evolutionary Algorithm. Technical Report 103,
|
||||
* Computer Engineering and Networks Laboratory (TIK), ETH Zurich, Zurich, Switzerland, 2001.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoSPEA2: public moeoEA < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Ctor with a crossover, a mutation and their corresponding rates.
|
||||
* @param _maxGen number of generations before stopping
|
||||
* @param _eval evaluation function
|
||||
* @param _crossover crossover
|
||||
* @param _pCross crossover probability
|
||||
* @param _mutation mutation
|
||||
* @param _pMut mutation probability
|
||||
* @param _archive archive
|
||||
* @param _k the k-ieme distance used to fixe diversity
|
||||
* @param _nocopy boolean allow to consider copies and doublons as bad elements whose were dominated by all other MOEOT in fitness assignment.
|
||||
*/
|
||||
moeoSPEA2 (unsigned int _maxGen, eoEvalFunc < MOEOT > & _eval, eoQuadOp < MOEOT > & _crossover, double _pCross, eoMonOp < MOEOT > & _mutation, double _pMut, moeoArchive < MOEOT >& _archive, unsigned int _k=1, bool _nocopy=false) :
|
||||
defaultGenContinuator(_maxGen), continuator(defaultGenContinuator), eval(_eval), loopEval(_eval), popEval(loopEval), archive(_archive),defaultSelect(2),select(defaultSelect, defaultSelect, _archive, 0.0),
|
||||
defaultSGAGenOp(_crossover, _pCross, _mutation, _pMut), fitnessAssignment(_archive, _nocopy),
|
||||
genBreed(defaultSelect, defaultSGAGenOp),selectMany(defaultSelect,0.0), selectTransform(selectMany, dummyTransform), breed(genBreed), diversityAssignment(dist,_archive, _k)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a crossover, a mutation and their corresponding rates.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval evaluation function
|
||||
* @param _crossover crossover
|
||||
* @param _pCross crossover probability
|
||||
* @param _mutation mutation
|
||||
* @param _pMut mutation probability
|
||||
* @param _archive archive
|
||||
* @param _k the k-ieme distance used to fixe diversity
|
||||
* @param _nocopy boolean allow to consider copies and doublons as bad elements whose were dominated by all other MOEOT in fitness assignment.
|
||||
*/
|
||||
moeoSPEA2 (eoContinue < MOEOT >& _continuator, eoEvalFunc < MOEOT > & _eval, eoQuadOp < MOEOT > & _crossover, double _pCross, eoMonOp < MOEOT > & _mutation, double _pMut, moeoArchive < MOEOT >& _archive, unsigned int _k=1, bool _nocopy=false) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(_eval), loopEval(_eval), popEval(loopEval), archive(_archive),defaultSelect(2),select(defaultSelect, defaultSelect, _archive, 0.0),
|
||||
defaultSGAGenOp(_crossover, _pCross, _mutation, _pMut), fitnessAssignment(_archive, _nocopy),
|
||||
genBreed(defaultSelect, defaultSGAGenOp),selectMany(defaultSelect,0.0), selectTransform(selectMany, dummyTransform), breed(genBreed), diversityAssignment(dist,_archive, _k)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a crossover, a mutation and their corresponding rates.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval pop evaluation function
|
||||
* @param _crossover crossover
|
||||
* @param _pCross crossover probability
|
||||
* @param _mutation mutation
|
||||
* @param _pMut mutation probability
|
||||
* @param _archive archive
|
||||
* @param _k the k-ieme distance used to fixe diversity
|
||||
* @param _nocopy boolean allow to consider copies and doublons as bad elements whose were dominated by all other MOEOT in fitness assignment.
|
||||
*/
|
||||
moeoSPEA2 (eoContinue < MOEOT >& _continuator, eoPopEvalFunc < MOEOT > & _eval, eoQuadOp < MOEOT > & _crossover, double _pCross, eoMonOp < MOEOT > & _mutation, double _pMut, moeoArchive < MOEOT >& _archive, unsigned int _k=1, bool _nocopy=false) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(dummyEval), loopEval(dummyEval), popEval(_eval), archive(_archive),defaultSelect(2),select(defaultSelect, defaultSelect, _archive, 0.0),
|
||||
defaultSGAGenOp(_crossover, _pCross, _mutation, _pMut), fitnessAssignment(_archive, _nocopy),
|
||||
genBreed(defaultSelect, defaultSGAGenOp),selectMany(defaultSelect,0.0), selectTransform(selectMany, dummyTransform), breed(genBreed), diversityAssignment(dist,_archive, _k)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a crossover, a mutation and their corresponding rates.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval evaluation function
|
||||
* @param _op general operator
|
||||
* @param _archive archive
|
||||
* @param _k the k-ieme distance used to fixe diversity
|
||||
* @param _nocopy boolean allow to consider copies and doublons as bad elements whose were dominated by all other MOEOT in fitness assignment.
|
||||
*/
|
||||
moeoSPEA2 (eoContinue < MOEOT >& _continuator, eoEvalFunc < MOEOT > & _eval, eoGenOp < MOEOT > & _op, moeoArchive < MOEOT >& _archive, unsigned int _k=1, bool _nocopy=false) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(_eval), loopEval(_eval), popEval(loopEval), archive(_archive),defaultSelect(2),select(defaultSelect, defaultSelect, _archive, 0.0),
|
||||
defaultSGAGenOp(defaultQuadOp, 0.0, defaultMonOp, 0.0), fitnessAssignment(_archive, _nocopy),
|
||||
genBreed(select, _op),selectMany(defaultSelect,0.0), selectTransform(selectMany, dummyTransform), breed(genBreed), diversityAssignment(dist,_archive, _k)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a crossover, a mutation and their corresponding rates.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval evaluation function
|
||||
* @param _op transformer
|
||||
* @param _archive archive
|
||||
* @param _k the k-ieme distance used to fixe diversity
|
||||
* @param _nocopy boolean allow to consider copies and doublons as bad elements whose were dominated by all other MOEOT in fitness assignment.
|
||||
*/
|
||||
moeoSPEA2 (eoContinue < MOEOT >& _continuator, eoEvalFunc < MOEOT > & _eval, eoTransform < MOEOT > & _op, moeoArchive < MOEOT >& _archive, unsigned int _k=1, bool _nocopy=false) :
|
||||
defaultGenContinuator(0), continuator(_continuator), eval(_eval), loopEval(_eval), popEval(loopEval), archive(_archive),defaultSelect(2),select(defaultSelect, defaultSelect, _archive, 0.0),
|
||||
defaultSGAGenOp(defaultQuadOp, 0.0, defaultMonOp, 0.0), fitnessAssignment(_archive, _nocopy),
|
||||
genBreed(defaultSelect, defaultSGAGenOp),selectMany(select,1.0), selectTransform(selectMany, _op), breed(selectTransform), diversityAssignment(dist,_archive, _k)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a crossover, a mutation and their corresponding rates.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval pop evaluation function
|
||||
* @param _op general operator
|
||||
* @param _archive archive
|
||||
* @param _k the k-ieme distance used to fixe diversity
|
||||
* @param _nocopy boolean allow to consider copies and doublons as bad elements whose were dominated by all other MOEOT in fitness assignment.
|
||||
*/
|
||||
moeoSPEA2 (eoContinue < MOEOT >& _continuator, eoPopEvalFunc < MOEOT > & _eval, eoGenOp < MOEOT > & _op, moeoArchive < MOEOT >& _archive, unsigned int _k=1, bool _nocopy=false) :
|
||||
defaultGenContinuator(0), continuator(_continuator),eval(dummyEval), loopEval(dummyEval), popEval(_eval), archive(_archive),defaultSelect(2),select(defaultSelect, defaultSelect, _archive, 0.0),
|
||||
defaultSGAGenOp(defaultQuadOp, 0.0, defaultMonOp, 0.0), fitnessAssignment(_archive, _nocopy),
|
||||
genBreed(select, _op),selectMany(defaultSelect,0.0), selectTransform(selectMany, dummyTransform), breed(genBreed), diversityAssignment(dist,_archive, _k)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with a crossover, a mutation and their corresponding rates.
|
||||
* @param _continuator stopping criteria
|
||||
* @param _eval pop evaluation function
|
||||
* @param _op transformer
|
||||
* @param _archive archive
|
||||
* @param _k the k-ieme distance used to fixe diversity
|
||||
* @param _nocopy boolean allow to consider copies and doublons as bad elements whose were dominated by all other MOEOT in fitness assignment.
|
||||
*/
|
||||
moeoSPEA2 (eoContinue < MOEOT >& _continuator, eoPopEvalFunc < MOEOT > & _eval, eoTransform < MOEOT > & _op, moeoArchive < MOEOT >& _archive, unsigned int _k=100, bool _nocopy=false) :
|
||||
defaultGenContinuator(0), continuator(_continuator),eval(dummyEval), loopEval(dummyEval), popEval(_eval), archive(_archive),defaultSelect(2),select(defaultSelect, defaultSelect, _archive, 0.0),
|
||||
defaultSGAGenOp(defaultQuadOp, 0.0, defaultMonOp, 0.0), fitnessAssignment(_archive, _nocopy),
|
||||
genBreed(defaultSelect, defaultSGAGenOp),selectMany(select,1.0), selectTransform(selectMany, _op), breed(selectTransform), diversityAssignment(dist,_archive, _k)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Apply a few generation of evolution to the population _pop until the stopping criteria is verified.
|
||||
* @param _pop the population
|
||||
*/
|
||||
virtual void operator () (eoPop < MOEOT > &_pop)
|
||||
{
|
||||
eoPop < MOEOT >empty_pop, offspring;
|
||||
popEval (empty_pop, _pop);// a first eval of _pop
|
||||
fitnessAssignment(_pop); //a first fitness assignment of _pop
|
||||
diversityAssignment(_pop);//a first diversity assignment of _pop
|
||||
archive(_pop);//a first filling of archive
|
||||
while (continuator (_pop))
|
||||
{
|
||||
// generate offspring, worths are recalculated if necessary
|
||||
breed (_pop, offspring);
|
||||
popEval (_pop, offspring); // eval of offspring
|
||||
// after replace, the new pop is in _pop. Worths are recalculated if necessary
|
||||
replace (_pop, offspring);
|
||||
fitnessAssignment(_pop); //fitness assignment of _pop
|
||||
diversityAssignment(_pop); //diversity assignment of _pop
|
||||
archive(_pop); //control of archive
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
protected:
|
||||
|
||||
/** dummy evaluation */
|
||||
class eoDummyEval : public eoEvalFunc< MOEOT >
|
||||
{
|
||||
public:
|
||||
void operator()(MOEOT &) {}
|
||||
}
|
||||
dummyEval;
|
||||
|
||||
/** dummy transform */
|
||||
class eoDummyTransform : public eoTransform<MOEOT>
|
||||
{
|
||||
public :
|
||||
void operator()(eoPop<MOEOT>&) {}
|
||||
}
|
||||
dummyTransform;
|
||||
|
||||
/** a continuator based on the number of generations (used as default) */
|
||||
eoGenContinue < MOEOT > defaultGenContinuator;
|
||||
/** stopping criteria */
|
||||
eoContinue < MOEOT > & continuator;
|
||||
/** evaluation function */
|
||||
eoEvalFunc < MOEOT > & eval;
|
||||
/** loop eval */
|
||||
eoPopLoopEval < MOEOT > loopEval;
|
||||
/** evaluation function used to evaluate the whole population */
|
||||
eoPopEvalFunc < MOEOT > & popEval;
|
||||
/**archive*/
|
||||
moeoArchive < MOEOT >& archive;
|
||||
/**SelectOne*/
|
||||
moeoDetTournamentSelect < MOEOT > defaultSelect;
|
||||
/** binary tournament selection */
|
||||
moeoSelectFromPopAndArch < MOEOT > select;
|
||||
/** a default mutation */
|
||||
eoMonCloneOp < MOEOT > defaultMonOp;
|
||||
/** a default crossover */
|
||||
eoQuadCloneOp < MOEOT > defaultQuadOp;
|
||||
/** an object for genetic operators (used as default) */
|
||||
eoSGAGenOp < MOEOT > defaultSGAGenOp;
|
||||
/** fitness assignment used in NSGA-II */
|
||||
moeoDominanceCountRankingFitnessAssignment < MOEOT > fitnessAssignment;
|
||||
/** general breeder */
|
||||
eoGeneralBreeder < MOEOT > genBreed;
|
||||
/** selectMany */
|
||||
eoSelectMany <MOEOT> selectMany;
|
||||
/** select Transform*/
|
||||
eoSelectTransform <MOEOT> selectTransform;
|
||||
/** breeder */
|
||||
eoBreed < MOEOT > & breed;
|
||||
/** diversity assignment used in NSGA-II */
|
||||
moeoNearestNeighborDiversityAssignment < MOEOT > diversityAssignment;
|
||||
/** elitist replacement */
|
||||
moeoGenerationalReplacement < MOEOT > replace;
|
||||
/**distance*/
|
||||
moeoEuclideanDistance < MOEOT > dist;
|
||||
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOSPEA2_H_*/
|
||||
149
trunk/moeo/src/algo/moeoUnifiedDominanceBasedLS.h
Executable file
149
trunk/moeo/src/algo/moeoUnifiedDominanceBasedLS.h
Executable file
|
|
@ -0,0 +1,149 @@
|
|||
/*
|
||||
* <moeoUnifiedDominanceBasedLS.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef _MOEOUNIFIEDDOMINANCEBASEDLS_H
|
||||
#define _MOEOUNIFIEDDOMINANCEBASEDLS_H
|
||||
|
||||
#include <eoPop.h>
|
||||
#include <eoContinue.h>
|
||||
#include <eoEvalFunc.h>
|
||||
#include <eoPopEvalFunc.h>
|
||||
#include <archive/moeoArchive.h>
|
||||
#include <algo/moeoPopLS.h>
|
||||
#include <explorer/moeoPopNeighborhoodExplorer.h>
|
||||
#include <selection/moeoUnvisitedSelect.h>
|
||||
|
||||
/**
|
||||
* A class to design dominance based local searches
|
||||
*/
|
||||
template < class Neighbor >
|
||||
class moeoUnifiedDominanceBasedLS : public moeoPopLS < Neighbor >
|
||||
{
|
||||
public:
|
||||
|
||||
/** Alias for the type */
|
||||
typedef typename Neighbor::EOT MOEOT;
|
||||
|
||||
/**
|
||||
* Ctor
|
||||
* @param _continuator a stop creterion
|
||||
* @param _eval a evaluation function
|
||||
* @param _archive a archive to store no-dominated individuals
|
||||
* @param _explorer a neighborhood explorer
|
||||
* @param _select a selector of unvisited individuals of a population
|
||||
*/
|
||||
moeoUnifiedDominanceBasedLS(
|
||||
eoContinue < MOEOT > & _continuator,
|
||||
eoEvalFunc < MOEOT > & _eval,
|
||||
moeoArchive < MOEOT > & _archive,
|
||||
moeoPopNeighborhoodExplorer < Neighbor > & _explorer,
|
||||
moeoUnvisitedSelect < MOEOT > & _select) :
|
||||
continuator(_continuator), loopEval(_eval), popEval(loopEval), archive(_archive), explorer(_explorer), select(_select) {}
|
||||
|
||||
/**
|
||||
* Applies a few generation of evolution to the population _pop.
|
||||
* @param _pop the population
|
||||
*/
|
||||
virtual void operator()(eoPop < MOEOT > & _pop)
|
||||
{
|
||||
std::vector < unsigned int> selectionVector;
|
||||
eoPop < MOEOT > tmp_pop;
|
||||
popEval(tmp_pop, _pop);
|
||||
archive(_pop);
|
||||
do{
|
||||
tmp_pop.resize(0);
|
||||
//selection
|
||||
selectionVector = select(archive);
|
||||
//exploration
|
||||
explorer(archive, selectionVector, tmp_pop);
|
||||
//archivage
|
||||
archive(tmp_pop);
|
||||
}
|
||||
while (continuator(archive) && naturalContinuator(archive));
|
||||
}
|
||||
|
||||
protected:
|
||||
|
||||
/** continuator */
|
||||
eoContinue < MOEOT > & continuator;
|
||||
/** loopEval */
|
||||
eoPopLoopEval < MOEOT > loopEval;
|
||||
/** popEval */
|
||||
eoPopEvalFunc < MOEOT > & popEval;
|
||||
/** archive */
|
||||
moeoArchive < MOEOT > & archive;
|
||||
/** explorer */
|
||||
moeoPopNeighborhoodExplorer < Neighbor > & explorer;
|
||||
/** selector */
|
||||
moeoUnvisitedSelect < MOEOT > & select;
|
||||
|
||||
/**
|
||||
* Natural Continuator (Stop when all individuals of the population are visited)
|
||||
*/
|
||||
class moeoContinue : public eoUF < eoPop < MOEOT > &, bool >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Ctor
|
||||
*/
|
||||
moeoContinue(){}
|
||||
|
||||
/**
|
||||
* functor which evaluate if the algorithm continue or not
|
||||
* @param _pop the population
|
||||
* @return true if the algorithm continue, else return false
|
||||
*/
|
||||
virtual bool operator()(eoPop < MOEOT > & _pop)
|
||||
{
|
||||
bool res = false;
|
||||
unsigned int i=0;
|
||||
while (!res && i < _pop.size()){
|
||||
res = (_pop[i].flag() != 1);
|
||||
i++;
|
||||
}
|
||||
//if (res==false)
|
||||
//std::cout << "[Natural stop]" << std::endl;
|
||||
return res;
|
||||
}
|
||||
} naturalContinuator;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOUNIFIEDDOMINANCEBASEDLS_H_*/
|
||||
|
||||
445
trunk/moeo/src/archive/moeo2DMinHypervolumeArchive.h
Normal file
445
trunk/moeo/src/archive/moeo2DMinHypervolumeArchive.h
Normal file
|
|
@ -0,0 +1,445 @@
|
|||
// j'ai installé le svn :)
|
||||
// re-test
|
||||
|
||||
/*
|
||||
* <moeo2DMinHypervolumeArchive.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEO2DMINHYPERVOLUMEARCHIVE_H_
|
||||
#define MOEO2DMINHYPERVOLUMEARCHIVE_H_
|
||||
|
||||
#include <set>
|
||||
#include <climits>
|
||||
|
||||
|
||||
template < class MOEOT >
|
||||
struct comp
|
||||
{
|
||||
// returns a "before" b
|
||||
// all objectives = min
|
||||
bool operator() (const MOEOT & a, const MOEOT & b)
|
||||
{
|
||||
return ((a.objectiveVector()[1] < b.objectiveVector()[1]) || ((a.objectiveVector()[1] == b.objectiveVector()[1]) && (a.objectiveVector()[0] < b.objectiveVector()[0])));
|
||||
}
|
||||
};
|
||||
|
||||
|
||||
/** 2D (minimization) bounded archive by hypervolume , base on a set */
|
||||
template < class MOEOT >
|
||||
class moeo2DMinHypervolumeArchive : public std::set<MOEOT , comp < MOEOT > >
|
||||
{
|
||||
public:
|
||||
|
||||
typedef typename MOEOT::Fitness Fitness;
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
typedef typename std::set < MOEOT, comp<MOEOT> >::iterator Iterator;
|
||||
|
||||
using std::set < MOEOT, comp<MOEOT> > :: begin;
|
||||
using std::set < MOEOT, comp<MOEOT> > :: end;
|
||||
using std::set < MOEOT, comp<MOEOT> > :: insert;
|
||||
using std::set < MOEOT, comp<MOEOT> > :: erase;
|
||||
using std::set < MOEOT, comp<MOEOT> > :: size;
|
||||
using std::set < MOEOT, comp<MOEOT> > :: upper_bound;
|
||||
|
||||
|
||||
/**
|
||||
* Ctr.
|
||||
* @param _maxSize size of the archive (must be >= 2)
|
||||
* @param _maxValue fitness assigned to the first and the last solution in the archive (default LONG_MAX)
|
||||
*/
|
||||
moeo2DMinHypervolumeArchive(unsigned int _maxSize=100, double _maxValue=LONG_MAX) : std::set < MOEOT, comp<MOEOT> > (), maxSize(_maxSize), maxValue(_maxValue)
|
||||
{
|
||||
maxSize = std::max((unsigned int) 2, maxSize);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Update the archive with a solution
|
||||
* @param _moeo a solution
|
||||
* @return true if _moeo has been added to the archive
|
||||
*/
|
||||
bool operator()(const MOEOT & _moeo)
|
||||
{
|
||||
//store result
|
||||
bool result;
|
||||
Iterator it;
|
||||
|
||||
//If archive is empty -> add the sol and affect its fitness value
|
||||
if (size()==0)
|
||||
{
|
||||
result = true;
|
||||
insert(_moeo);
|
||||
it=begin();
|
||||
fitness(it, maxValue);
|
||||
}
|
||||
else // test if sol can be added to the archive
|
||||
{
|
||||
result = insert(_moeo.objectiveVector());
|
||||
if (result)
|
||||
{
|
||||
if(size() < maxSize)
|
||||
{
|
||||
// if yes, insert it and recompute fitness value of MOEOT and its neighbors
|
||||
insert(hint, _moeo);
|
||||
if(size() > 2)
|
||||
{
|
||||
//general case
|
||||
hint--;
|
||||
computeFitness(hint);
|
||||
}
|
||||
else
|
||||
{
|
||||
//archive size <= 2, fitness=maxValue for each sol
|
||||
it=begin();
|
||||
while(it!=end())
|
||||
{
|
||||
fitness(it, maxValue);
|
||||
it++;
|
||||
}
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
result = filter(_moeo);
|
||||
}
|
||||
}
|
||||
}
|
||||
return result;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* update the archive with a population
|
||||
* @param _pop a pop
|
||||
* @return true if at least one solution of _pop has been added to the archive
|
||||
*/
|
||||
bool operator()(const eoPop < MOEOT > & _pop)
|
||||
{
|
||||
bool result = false;
|
||||
bool tmp = false;
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
std::cout << "insert " << _pop[i].objectiveVector()[0] << ", " << _pop[i].objectiveVector()[1] << std::endl;
|
||||
tmp = (*this)(_pop[i]);
|
||||
result = tmp || result;
|
||||
}
|
||||
return result;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Test if insertion wrt Pareto-dominance is possible, and fix 'hint' if possible
|
||||
* @param _objVec the objective vector of the sol to insert
|
||||
* @return true if objVec can be added to the archive wrt Pareto-dominance
|
||||
*/
|
||||
bool insert(const ObjectiveVector & _objVec)
|
||||
{
|
||||
bool result = false;
|
||||
Iterator it;
|
||||
double min;
|
||||
// set the objVec to the empty solution
|
||||
empty.objectiveVector(_objVec);
|
||||
// compute the position where it would possibly be added
|
||||
it = upper_bound(empty);
|
||||
// compute the weigth from the previous solution
|
||||
min = begin()->objectiveVector()[0];
|
||||
if (it != begin())
|
||||
{
|
||||
it--;
|
||||
min = (*it).objectiveVector()[0];
|
||||
it++;
|
||||
}
|
||||
// if it has a better weitgh, or if it's an extreme sol, let's add it
|
||||
if (it == begin() || _objVec[0]<min)
|
||||
{
|
||||
// remove dominated solutions
|
||||
remove(it,_objVec);
|
||||
// set hint to the current iterator (probably modified by "remove")
|
||||
hint=it;
|
||||
// set result to true
|
||||
result = true;
|
||||
}
|
||||
return result;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* print objective vector and fitness value of the archive
|
||||
*/
|
||||
void print()
|
||||
{
|
||||
Iterator it = begin();
|
||||
while(it!=end())
|
||||
{
|
||||
std::cout << (*it).objectiveVector()[0] << " " << (*it).objectiveVector()[1] << ", fit: " << (*it).fitness() << std::endl;
|
||||
it++;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
protected:
|
||||
|
||||
/** size max of the archive */
|
||||
unsigned int maxSize;
|
||||
/** fitness assigned to the first and the last solution in the archive */
|
||||
double maxValue;
|
||||
/** hint for the insertion */
|
||||
Iterator hint;
|
||||
|
||||
/** an empty MOEOT used for checking insertion */
|
||||
MOEOT empty;
|
||||
|
||||
|
||||
/**
|
||||
* set fitness
|
||||
*/
|
||||
void fitness(Iterator & _it, double _fitnessValue)
|
||||
{
|
||||
MOEOT* tmp;
|
||||
tmp = (MOEOT*)&(*_it);
|
||||
tmp->fitness(_fitnessValue);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* remove solutions from the archive that are dominated by _objVec
|
||||
* @param _it an iterator beginning on the first potentialy sol to remove
|
||||
* @param _objVec the objective vector of the new solution
|
||||
*/
|
||||
void remove(Iterator & _it, const ObjectiveVector & _objVec)
|
||||
{
|
||||
Iterator itd;
|
||||
while ((_it!=end()) && ((*_it).objectiveVector()[0] >= _objVec[0]))
|
||||
{
|
||||
itd = _it;
|
||||
_it++;
|
||||
erase(itd);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* compute fitness value of a solution and its two neighbors
|
||||
* @param _it refer to the solution
|
||||
*/
|
||||
void computeFitness(Iterator & _it)
|
||||
{
|
||||
Iterator tmp;
|
||||
if(_it!=begin())
|
||||
{
|
||||
tmp=_it;
|
||||
tmp--;
|
||||
compute(tmp);
|
||||
}
|
||||
_it++;
|
||||
if(_it!=end())
|
||||
{
|
||||
_it--;
|
||||
tmp=_it;
|
||||
tmp++;
|
||||
compute(tmp);
|
||||
}
|
||||
else
|
||||
{
|
||||
_it--;
|
||||
}
|
||||
compute(_it);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* compute fitness value of a solution
|
||||
* @param _it refer to the solution
|
||||
*/
|
||||
void compute(Iterator & _it)
|
||||
{
|
||||
double x0, x1, y0, y1, fit;
|
||||
if (_it==begin())
|
||||
{
|
||||
fitness(_it, maxValue);
|
||||
}
|
||||
else if ((++_it)==end())
|
||||
{
|
||||
_it--;
|
||||
fitness(_it, maxValue);
|
||||
}
|
||||
else
|
||||
{
|
||||
_it--;
|
||||
x0 = (*_it).objectiveVector()[0];
|
||||
y0 = (*_it).objectiveVector()[1];
|
||||
_it--;
|
||||
x1 = (*_it).objectiveVector()[0];
|
||||
_it++;
|
||||
_it++;
|
||||
y1 = (*_it).objectiveVector()[1];
|
||||
_it--;
|
||||
fit = (x1 - x0) * (y1 - y0);
|
||||
fitness(_it, fit);
|
||||
//tmp = (MOEOT*)&(*_it);
|
||||
//tmp->fitness(fit);
|
||||
}
|
||||
}
|
||||
|
||||
double computeTmp(const ObjectiveVector & _objVec, int _where)
|
||||
{
|
||||
double res, tmp;
|
||||
if(hint==begin() || hint==end())
|
||||
res=maxValue;
|
||||
else{
|
||||
if(_where==0){
|
||||
//on calcule la fit de celui à potentiellement inserer
|
||||
res= (*hint).objectiveVector()[1] - _objVec[1];
|
||||
hint--;
|
||||
res*= ((*hint).objectiveVector()[0] - _objVec[0]);
|
||||
hint++;
|
||||
}
|
||||
else if(_where <0){
|
||||
// on calcule la fit de son predecesseur
|
||||
res= _objVec[1] - (*hint).objectiveVector()[1];
|
||||
tmp=(*hint).objectiveVector()[0];
|
||||
hint--;
|
||||
res*= ((*hint).objectiveVector()[0] - tmp);
|
||||
hint++;
|
||||
}
|
||||
else{
|
||||
// on calcule la fit de son successeur
|
||||
res= _objVec[0] - (*hint).objectiveVector()[0];
|
||||
tmp=(*hint).objectiveVector()[1];
|
||||
hint++;
|
||||
res*= ((*hint).objectiveVector()[1] - tmp);
|
||||
hint--;
|
||||
}
|
||||
}
|
||||
return res;
|
||||
}
|
||||
|
||||
|
||||
void filterbis()
|
||||
{
|
||||
Iterator it, itd;
|
||||
//used to find sol with minimum fitness value
|
||||
double minFit = maxValue;
|
||||
|
||||
// remove MOEOT with the lowest fitness value while archive size > maxSize
|
||||
while (size() > maxSize)
|
||||
{
|
||||
//find sol with minimum fitness
|
||||
for(it=begin(); it!=end(); it++)
|
||||
{
|
||||
if(it->fitness() < minFit)
|
||||
{
|
||||
minFit = it->fitness();
|
||||
itd = it;
|
||||
}
|
||||
}
|
||||
//remove it and recompute fitness of its neighbors
|
||||
it = itd;
|
||||
it--;
|
||||
erase(itd);
|
||||
compute(it);
|
||||
it++;
|
||||
compute(it);
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* iteratively removes the less-contributing solution from the acrhive
|
||||
*/
|
||||
bool filter(const MOEOT & _moeo)
|
||||
{
|
||||
bool res;
|
||||
double x, y, pred, succ, tmp=0;
|
||||
|
||||
if(hint==begin() || hint==end())
|
||||
{
|
||||
insert(hint, _moeo);
|
||||
hint--;
|
||||
computeFitness(hint);
|
||||
filterbis();
|
||||
res=true;
|
||||
}
|
||||
else
|
||||
{
|
||||
//compute fitness tmp
|
||||
tmp=computeTmp(_moeo.objectiveVector(), 0);
|
||||
hint--;
|
||||
pred=computeTmp(_moeo.objectiveVector(), -1);
|
||||
hint++;
|
||||
succ=computeTmp(_moeo.objectiveVector(), 1);
|
||||
if(tmp>succ || tmp>pred)
|
||||
{
|
||||
insert(hint, _moeo);
|
||||
hint--;
|
||||
//ici faudrait utiliser les valeurs qu'on vient de calculer pour les affecter direct (faire attention à ou on se trouve)
|
||||
computeFitness(hint);
|
||||
filterbis();
|
||||
res=true;
|
||||
}
|
||||
else
|
||||
{
|
||||
Iterator it;
|
||||
double minFit = maxValue;
|
||||
for(it=begin(); it!=end(); it++)
|
||||
{
|
||||
if(it->fitness() < minFit)
|
||||
{
|
||||
minFit = it->fitness();
|
||||
}
|
||||
}
|
||||
if (tmp<=minFit)
|
||||
{
|
||||
res = false;
|
||||
}
|
||||
else
|
||||
{
|
||||
// REDONDANT arranger le code
|
||||
insert(hint, _moeo);
|
||||
hint--;
|
||||
//ici faudrait utiliser les valeurs qu'on vient de calculer pour les affecter direct (faire attention à ou on se trouve)
|
||||
computeFitness(hint);
|
||||
filterbis();
|
||||
res=true;
|
||||
}
|
||||
}
|
||||
}
|
||||
return res;
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /* MOEO2DMINHYPERVOLUMEARCHIVE_H_ */
|
||||
235
trunk/moeo/src/archive/moeoArchive.h
Normal file
235
trunk/moeo/src/archive/moeoArchive.h
Normal file
|
|
@ -0,0 +1,235 @@
|
|||
/*
|
||||
* <moeoArchive.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOARCHIVE_H_
|
||||
#define MOEOARCHIVE_H_
|
||||
|
||||
#include <eoPop.h>
|
||||
#include <comparator/moeoObjectiveVectorComparator.h>
|
||||
#include <comparator/moeoParetoObjectiveVectorComparator.h>
|
||||
|
||||
|
||||
/**
|
||||
* Abstract class for representing an archive ;
|
||||
* an archive is a secondary population that stores non-dominated solutions.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoArchive : public eoPop < MOEOT >, public eoUF < const MOEOT &, bool>, public eoUF < const eoPop < MOEOT > &, bool>
|
||||
{
|
||||
public:
|
||||
|
||||
using eoPop < MOEOT > :: size;
|
||||
using eoPop < MOEOT > :: operator[];
|
||||
using eoPop < MOEOT > :: back;
|
||||
using eoPop < MOEOT > :: pop_back;
|
||||
|
||||
|
||||
/**
|
||||
* The type of an objective vector for a solution
|
||||
*/
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Default ctor.
|
||||
* The moeoObjectiveVectorComparator used to compare solutions is based on Pareto dominance
|
||||
* @param _replace boolean which determine if a solution with the same objectiveVector than another one, can replace it or not
|
||||
*/
|
||||
moeoArchive(bool _replace=true) : eoPop < MOEOT >(), comparator(paretoComparator), replace(_replace)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor
|
||||
* @param _comparator the moeoObjectiveVectorComparator used to compare solutions
|
||||
* @param _replace boolean which determine if a solution with the same objectiveVector than another one, can replace it or not
|
||||
*/
|
||||
moeoArchive(moeoObjectiveVectorComparator < ObjectiveVector > & _comparator, bool _replace=true) : eoPop < MOEOT >(), comparator(_comparator), replace(_replace)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the current archive dominates _objectiveVector according to the moeoObjectiveVectorComparator given in the constructor
|
||||
* @param _objectiveVector the objective vector to compare with the current archive
|
||||
*/
|
||||
bool dominates (const ObjectiveVector & _objectiveVector) const
|
||||
{
|
||||
for (unsigned int i = 0; i<size(); i++)
|
||||
{
|
||||
// if _objectiveVector is dominated by the ith individual of the archive...
|
||||
if ( comparator(_objectiveVector, operator[](i).objectiveVector()) )
|
||||
{
|
||||
return true;
|
||||
}
|
||||
}
|
||||
return false;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the current archive already contains a solution with the same objective values than _objectiveVector
|
||||
* @param _objectiveVector the objective vector to compare with the current archive
|
||||
*/
|
||||
bool contains (const ObjectiveVector & _objectiveVector) const
|
||||
{
|
||||
for (unsigned int i = 0; i<size(); i++)
|
||||
{
|
||||
if (operator[](i).objectiveVector() == _objectiveVector)
|
||||
{
|
||||
return true;
|
||||
}
|
||||
}
|
||||
return false;
|
||||
}
|
||||
|
||||
|
||||
|
||||
|
||||
/**
|
||||
* Updates the archive with a given individual _moeo
|
||||
* @param _moeo the given individual
|
||||
* @return if the _moeo is added to the archive
|
||||
*/
|
||||
virtual bool operator()(const MOEOT & _moeo) = 0;
|
||||
|
||||
|
||||
/**
|
||||
* Updates the archive with a given population _pop
|
||||
* @param _pop the given population
|
||||
* @return if at least one _pop[i] is added to the archive
|
||||
*/
|
||||
virtual bool operator()(const eoPop < MOEOT > & _pop) = 0;
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the current archive contains the same objective vectors than the given archive _arch
|
||||
* @param _arch the given archive
|
||||
*/
|
||||
bool equals (const moeoArchive < MOEOT > & _arch)
|
||||
{
|
||||
for (unsigned int i=0; i<size(); i++)
|
||||
{
|
||||
if (! _arch.contains(operator[](i).objectiveVector()))
|
||||
{
|
||||
return false;
|
||||
}
|
||||
}
|
||||
for (unsigned int i=0; i<_arch.size() ; i++)
|
||||
{
|
||||
if (! contains(_arch[i].objectiveVector()))
|
||||
{
|
||||
return false;
|
||||
}
|
||||
}
|
||||
return true;
|
||||
}
|
||||
|
||||
protected:
|
||||
/**
|
||||
* Updates the archive with a given individual _moeo
|
||||
* @param _moeo the given individual
|
||||
*/
|
||||
bool update(const MOEOT & _moeo)
|
||||
{
|
||||
// first step: removing the dominated solutions from the archive
|
||||
for (unsigned int j=0; j<size();)
|
||||
{
|
||||
// if the jth solution contained in the archive is dominated by _moeo
|
||||
if ( comparator(operator[](j).objectiveVector(), _moeo.objectiveVector()) )
|
||||
{
|
||||
operator[](j) = back();
|
||||
pop_back();
|
||||
}
|
||||
else if (replace && (_moeo.objectiveVector() == operator[](j).objectiveVector()))
|
||||
{
|
||||
operator[](j) = back();
|
||||
pop_back();
|
||||
}
|
||||
else
|
||||
{
|
||||
j++;
|
||||
}
|
||||
}
|
||||
// second step: is _moeo dominated?
|
||||
bool dom = false;
|
||||
for (unsigned int j=0; j<size(); j++)
|
||||
{
|
||||
// if _moeo is dominated by the jth solution contained in the archive
|
||||
if ( comparator(_moeo.objectiveVector(), operator[](j).objectiveVector()) )
|
||||
{
|
||||
dom = true;
|
||||
break;
|
||||
}
|
||||
else if (!replace && (_moeo.objectiveVector() == operator[](j).objectiveVector()) )
|
||||
{
|
||||
dom = true;
|
||||
break;
|
||||
}
|
||||
}
|
||||
if (!dom)
|
||||
{
|
||||
this->push_back(_moeo);
|
||||
}
|
||||
return !dom;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Updates the archive with a given population _pop
|
||||
* @param _pop the given population
|
||||
*/
|
||||
bool update(const eoPop < MOEOT > & _pop)
|
||||
{
|
||||
bool res = false;
|
||||
bool tmp = false;
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
tmp = (*this).update(_pop[i]);
|
||||
res = tmp || res;
|
||||
}
|
||||
return res;
|
||||
}
|
||||
|
||||
/** The moeoObjectiveVectorComparator used to compare solutions */
|
||||
moeoObjectiveVectorComparator < ObjectiveVector > & comparator;
|
||||
/** A moeoObjectiveVectorComparator based on Pareto dominance (used as default) */
|
||||
moeoParetoObjectiveVectorComparator < ObjectiveVector > paretoComparator;
|
||||
/** boolean */
|
||||
bool replace;
|
||||
};
|
||||
|
||||
#endif /*MOEOARCHIVE_H_ */
|
||||
81
trunk/moeo/src/archive/moeoBoundedArchive.h
Normal file
81
trunk/moeo/src/archive/moeoBoundedArchive.h
Normal file
|
|
@ -0,0 +1,81 @@
|
|||
/*
|
||||
* <moeoBoundedArchive.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Lille-Nord Europe, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jeremie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
// moeoBoundedArchive.h
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOBOUNDEDARCHIVE_H_
|
||||
#define MOEOBOUNDEDARCHIVE_H_
|
||||
|
||||
#include <archive/moeoArchive.h>
|
||||
|
||||
/**
|
||||
* This class represents a bounded archive which different parameters to specify.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoBoundedArchive : public moeoArchive < MOEOT >
|
||||
{
|
||||
public:
|
||||
/**
|
||||
* The type of an objective vector for a solution
|
||||
*/
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own moeoObjectiveVectorComparator and archive size.
|
||||
* @param _comparator the functor used to compare objective vectors
|
||||
* @param _maxSize the size of archive (must be smaller or egal to the population size)
|
||||
* @param _replace boolean which determine if a solution with the same objectiveVector than another one, can replace it or not
|
||||
*/
|
||||
moeoBoundedArchive(moeoObjectiveVectorComparator < ObjectiveVector > & _comparator, unsigned int _maxSize=100, bool _replace=true) : moeoArchive < MOEOT >(_comparator, _replace), maxSize(_maxSize){}
|
||||
|
||||
/**
|
||||
* Ctor with moeoParetoObjectiveVectorComparator where you can choose your own archive size.
|
||||
* @param _maxSize the size of archive (must be smaller or egal to the population size)
|
||||
* @param _replace boolean which determine if a solution with the same objectiveVector than another one, can replace it or not
|
||||
*/
|
||||
moeoBoundedArchive(unsigned int _maxSize=100, bool _replace=true) : moeoArchive < MOEOT >(_replace), maxSize(_maxSize){}
|
||||
|
||||
protected:
|
||||
|
||||
/** archive max size */
|
||||
unsigned int maxSize;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOBOUNDEDARCHIVE_H_*/
|
||||
421
trunk/moeo/src/archive/moeoEpsilonHyperboxArchive.h
Normal file
421
trunk/moeo/src/archive/moeoEpsilonHyperboxArchive.h
Normal file
|
|
@ -0,0 +1,421 @@
|
|||
/*
|
||||
* <moeoEpsilonHyperboxArchive.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Lille-Nord Europe, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jeremie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
// moeoEpsilonHyperboxArchive.h
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOEPSILONBOXARCHIVE_H_
|
||||
#define MOEOEPSILONBOXARCHIVE_H_
|
||||
|
||||
#include <eoPop.h>
|
||||
#include <comparator/moeoComparator.h>
|
||||
#include <comparator/moeoObjectiveVectorComparator.h>
|
||||
#include <distance/moeoEuclideanDistance.h>
|
||||
#include <utils/moeoObjectiveVectorNormalizer.h>
|
||||
#include <utils/eoRealBounds.h>
|
||||
|
||||
/**
|
||||
* This class represents an epsilon hyperbox archive.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoEpsilonHyperboxArchive : public moeoArchive < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
using moeoArchive < MOEOT > :: size;
|
||||
using moeoArchive < MOEOT > :: resize;
|
||||
using moeoArchive < MOEOT > :: operator[];
|
||||
using moeoArchive < MOEOT > :: back;
|
||||
using moeoArchive < MOEOT > :: pop_back;
|
||||
using moeoArchive < MOEOT > :: push_back;
|
||||
using moeoArchive < MOEOT > :: begin;
|
||||
using moeoArchive < MOEOT > :: end;
|
||||
using moeoArchive < MOEOT > :: replace;
|
||||
|
||||
|
||||
/**
|
||||
* The type of an objective vector for a solution
|
||||
*/
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own moeoObjectiveVectorComparator
|
||||
* @param _comparator the functor used to compare objective vectors
|
||||
* @param _epsilon the vector contains epsilon values for each objective
|
||||
* @param _replace boolean which determine if a solution with the same objectiveVector than another one, can replace it or not
|
||||
*/
|
||||
moeoEpsilonHyperboxArchive(moeoObjectiveVectorComparator < ObjectiveVector > & _comparator, std::vector<double> _epsilon, bool _replace=true) : moeoArchive < MOEOT >(_comparator, _replace), epsilon(_epsilon), bounds(0.0, 1.0), normalizer(bounds, 1.0)
|
||||
{}
|
||||
|
||||
/**
|
||||
* Default Ctor
|
||||
* @param _epsilon the vector contains epsilon values for each objective
|
||||
* @param _replace boolean which determine if a solution with the same objectiveVector than another one, can replace it or not
|
||||
*/
|
||||
moeoEpsilonHyperboxArchive(std::vector<double> _epsilon, bool _replace=true) : moeoArchive < MOEOT >(paretoComparator, _replace), epsilon(_epsilon), bounds(0.0, 1.0), normalizer(bounds, 1.0)
|
||||
{}
|
||||
|
||||
/**
|
||||
* Updates the archive with a given individual _moeo
|
||||
* @param _moeo the given individual
|
||||
* @return true if _moeo is non-dominated (and not if it is added to the archive)
|
||||
*/
|
||||
bool operator()(const MOEOT & _moeo)
|
||||
{
|
||||
bool res=false;
|
||||
unsigned int i=0;
|
||||
bool nonstop = true;
|
||||
bool same = true;
|
||||
int change = 0;
|
||||
MOEOT removed;
|
||||
|
||||
//if the archive is empty, we accept automaticaly _moeo
|
||||
if(size()==0){
|
||||
push_back(_moeo);
|
||||
ideal = _moeo.objectiveVector();
|
||||
nadir = _moeo.objectiveVector();
|
||||
res = true;
|
||||
}
|
||||
else{
|
||||
//change bounds if necessary
|
||||
change = changeBounds(_moeo);
|
||||
|
||||
//if change < 0, we have detected that _moeo is bad
|
||||
//else there are 4 cases:
|
||||
if(change >= 0){
|
||||
//calculate the hyperbox corner of _moeo
|
||||
ObjectiveVector corner, tmp;
|
||||
corner=hyperbox(_moeo);
|
||||
|
||||
//test if _moeo hyperbox corner dominates a hyperbox corner of an element of the archive
|
||||
while(nonstop && (i<size())){
|
||||
same = true;
|
||||
//calculate the hyperbox corner of the ieme element of the archive
|
||||
tmp=hyperbox(operator[](i));
|
||||
|
||||
//CASE 1: _moeo epsilon-domine the ieme element of the archive
|
||||
if(this->comparator(tmp, corner)){
|
||||
std::cout << "ENTER CASE 1" << std::endl;
|
||||
//test if bounds changed
|
||||
//removed=operator[](i);
|
||||
//delete the ieme element of the archive
|
||||
if(i==size()-1)
|
||||
pop_back();
|
||||
else{
|
||||
operator[](i)=back();
|
||||
pop_back();
|
||||
i--;
|
||||
}
|
||||
//changeBoundsByDeleting(removed);
|
||||
res = true;
|
||||
}//END CASE 1
|
||||
//CASE 2: the ieme element of the archive epsilon-domine _moeo
|
||||
else if(this->comparator(corner, tmp)){
|
||||
std::cout << "ENTER CASE 2" << std::endl;
|
||||
if(change == 1)
|
||||
changeBoundsByDeleting(_moeo);
|
||||
//we can stop
|
||||
nonstop = false;
|
||||
}//END CASE 2
|
||||
// _moeo is no-epsilon-dominated by archive[i] and arhcive[i] is no-epsilon-dominated by _moeo
|
||||
else{
|
||||
//test if the hyperbox corner are the same
|
||||
for(unsigned int j=0; j<corner.size(); j++)
|
||||
same = same && (corner[j] == tmp[j]);
|
||||
//CASE 3: _moeo is in the same hyperbox of archive[i]
|
||||
if(same){
|
||||
std::cout << "ENTER CASE 3" << std::endl;
|
||||
// _moeo dominates archive[i]
|
||||
if(this->comparator(operator[](i).objectiveVector(), _moeo.objectiveVector())){
|
||||
if(i==size()-1)
|
||||
pop_back();
|
||||
else{
|
||||
operator[](i)=back();
|
||||
pop_back();
|
||||
i--;
|
||||
}
|
||||
// removed=operator[](i);
|
||||
// operator[](i) = _moeo;
|
||||
// changeBoundsByDeleting(removed);
|
||||
res=true;
|
||||
}
|
||||
// _moeo is dominated by archive[i]
|
||||
else if(this->comparator(_moeo.objectiveVector(), operator[](i).objectiveVector())){
|
||||
changeBoundsByDeleting(_moeo);
|
||||
nonstop=false;
|
||||
}
|
||||
else{
|
||||
//keep the one who have the shortest euclidian distance between the corner
|
||||
moeoEuclideanDistance < MOEOT > dist;
|
||||
double d1 = dist(_moeo.objectiveVector(), corner);
|
||||
double d2 = dist(operator[](i).objectiveVector(), corner);
|
||||
if(d1 <= d2){
|
||||
if(i==size()-1)
|
||||
pop_back();
|
||||
else{
|
||||
operator[](i)=back();
|
||||
pop_back();
|
||||
i--;
|
||||
}
|
||||
// removed=operator[](i);
|
||||
// operator[](i) = _moeo;
|
||||
// changeBoundsByDeleting(removed);
|
||||
res=true;
|
||||
}
|
||||
else{
|
||||
nonstop=false;
|
||||
// changeBoundsByDeleting(_moeo);
|
||||
res=true;
|
||||
}
|
||||
}
|
||||
|
||||
}//END CASE 3
|
||||
}
|
||||
i++;
|
||||
}
|
||||
//CASE 4: _moeo have is place in a empty hyperbox
|
||||
if(nonstop){
|
||||
std::cout << "ENTER CASE 4" << std::endl;
|
||||
push_back(_moeo);
|
||||
res=true;
|
||||
recalculateBounds();
|
||||
}//END CASE 4
|
||||
}
|
||||
else{
|
||||
std::cout << "ENTER CASE 5" << std::endl;
|
||||
}
|
||||
}
|
||||
|
||||
return res;
|
||||
}
|
||||
|
||||
/**
|
||||
* Updates the archive with a given population _pop
|
||||
* @param _pop the given population
|
||||
* @return if an archive's element is non-dominated (and not if it is added to the archive)
|
||||
*/
|
||||
bool operator()(const eoPop < MOEOT > & _pop)
|
||||
{
|
||||
bool res, tmp = false;
|
||||
for(unsigned int i=0; i<_pop.size(); i++){
|
||||
tmp = (*this)(_pop[i]);
|
||||
res = res || tmp;
|
||||
}
|
||||
return res;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* get the nadir point
|
||||
* @return ObjectiveVector corresponding to the nadir point
|
||||
*/
|
||||
ObjectiveVector getNadir(){
|
||||
return nadir;
|
||||
}
|
||||
|
||||
/**
|
||||
* get the idealpoint
|
||||
* @return ObjectiveVector corresponding to the ideal point
|
||||
*/
|
||||
ObjectiveVector getIdeal(){
|
||||
return ideal;
|
||||
}
|
||||
|
||||
void filtre(){
|
||||
eoPop<MOEOT> pop;
|
||||
for(int i=0; i<size(); i++)
|
||||
pop.push_back(operator[](i));
|
||||
for(int i=0; i<pop.size(); i++)
|
||||
(*this)(pop[i]);
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/**
|
||||
* calculate the hyperbox corner of _moeo
|
||||
* @param _moeo the given individual
|
||||
* @return the ObjectiveVector contains the hyperbox corner values
|
||||
*/
|
||||
ObjectiveVector hyperbox(const MOEOT & _moeo){
|
||||
//normalize _moeo's objectiveVector
|
||||
ObjectiveVector res;
|
||||
res = normalizer(_moeo.objectiveVector());
|
||||
|
||||
// std::cout << "ObjectiveVector non normalise:"<< _moeo.objectiveVector() << std::endl;
|
||||
// std::cout << "ObjectiveVector normalise:"<< res << std::endl;
|
||||
|
||||
//calculate the hyperbox corner
|
||||
for(unsigned int i=0; i<ObjectiveVector::nObjectives(); i++){
|
||||
if(ObjectiveVector::minimizing(i))
|
||||
res[i] = floor(res[i]*1.0/epsilon[i]);
|
||||
else
|
||||
res[i] = ceil(res[i]*1.0/epsilon[i]);
|
||||
}
|
||||
// std::cout << "ObjectiveVector epsilone:" << res << std::endl;
|
||||
return res;
|
||||
}
|
||||
|
||||
/**
|
||||
* changes ideal and nadir point if _moeo is out of bounds and is not bad
|
||||
* @param _moeo the given individual
|
||||
* @return if bounds changed or not (1 -> changed, 0 -> not changed, -1 -> _moeo is bad)
|
||||
*/
|
||||
int changeBounds(const MOEOT & _moeo){
|
||||
// std::cout << "changebounds objVec: "<< _moeo.objectiveVector() << std::endl;
|
||||
int res = 0;
|
||||
//check if an objective is better than the corresponding of the current ideal point
|
||||
for(unsigned int i=0; i<ObjectiveVector::nObjectives(); i++){
|
||||
if(ObjectiveVector::minimizing(i)){
|
||||
if(_moeo.objectiveVector()[i] < ideal[i]){
|
||||
ideal[i]=_moeo.objectiveVector()[i];
|
||||
res = 1;
|
||||
}
|
||||
}
|
||||
else{
|
||||
if(_moeo.objectiveVector()[i] > ideal[i]){
|
||||
ideal[i]=_moeo.objectiveVector()[i];
|
||||
res = 1;
|
||||
}
|
||||
}
|
||||
}
|
||||
//check if an objective is worst than the corresponding of the current nadir point
|
||||
for(unsigned int i=0; i<ObjectiveVector::nObjectives(); i++){
|
||||
if(ObjectiveVector::minimizing(i)){
|
||||
if(_moeo.objectiveVector()[i] > nadir[i]){
|
||||
if(res == 1)
|
||||
nadir[i]=_moeo.objectiveVector()[i];
|
||||
else
|
||||
res = -1; // no objective is better than the ideal and some are worst than nadir -> _moeo is bad
|
||||
}
|
||||
}
|
||||
else{
|
||||
if(_moeo.objectiveVector()[i] < nadir[i]){
|
||||
if(res == 1)
|
||||
nadir[i]=_moeo.objectiveVector()[i];
|
||||
else
|
||||
res = -1; // no objective is better than the ideal and some are worst than nadir -> _moeo is bad
|
||||
}
|
||||
}
|
||||
}
|
||||
//If bounds are changed, change the scale of normalizer
|
||||
if(res == 1){
|
||||
ObjectiveVector mini;
|
||||
ObjectiveVector maxi;
|
||||
for(unsigned int i=0; i<ObjectiveVector::nObjectives(); i++){
|
||||
mini[i]=std::min(ideal[i], nadir[i]);
|
||||
maxi[i]=std::max(ideal[i], nadir[i]);
|
||||
}
|
||||
normalizer.update_by_min_max(mini, maxi);
|
||||
}
|
||||
// std::cout << "change nadir: " << nadir << std::endl;
|
||||
// std::cout << "change ideal: " << ideal << std::endl;
|
||||
// std::cout << "res: " << res << std::endl;
|
||||
return res;
|
||||
}
|
||||
|
||||
/**
|
||||
* when a element is deleting, change the bounds if neccesary.
|
||||
* @param _moeo the deleted individual
|
||||
*/
|
||||
void changeBoundsByDeleting(const MOEOT & _moeo){
|
||||
for(unsigned int i=0; i< ObjectiveVector::nObjectives(); i++){
|
||||
if((_moeo.objectiveVector()[i]==nadir[i]) || (_moeo.objectiveVector()[i]==ideal[i]) )
|
||||
return recalculateBounds();
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* recalculate ideal and nadir point and change scale of normalizer
|
||||
*/
|
||||
void recalculateBounds(){
|
||||
ObjectiveVector tmp;
|
||||
ideal=operator[](0).objectiveVector();
|
||||
nadir=operator[](0).objectiveVector();
|
||||
if (size() > 1){
|
||||
for(unsigned int i=0; i< ObjectiveVector::nObjectives(); i++){
|
||||
for(unsigned int j=1; j<size(); j++){
|
||||
tmp=operator[](j).objectiveVector();
|
||||
if(ObjectiveVector::minimizing(i)){
|
||||
if(tmp[i] < ideal[i])
|
||||
ideal[i] = tmp[i];
|
||||
else if(tmp[i] > nadir[i])
|
||||
nadir[i] = tmp[i];
|
||||
}
|
||||
else{
|
||||
if(tmp[i] > ideal[i]){
|
||||
ideal[i] = tmp[i];
|
||||
}
|
||||
else if(tmp[i] < nadir[i]){
|
||||
nadir[i] = tmp[i];
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
ObjectiveVector mini;
|
||||
ObjectiveVector maxi;
|
||||
for(unsigned int i=0; i<ObjectiveVector::nObjectives(); i++){
|
||||
mini[i]=std::min(ideal[i], nadir[i]);
|
||||
maxi[i]=std::max(ideal[i], nadir[i]);
|
||||
}
|
||||
normalizer.update_by_min_max(mini, maxi);
|
||||
}
|
||||
|
||||
|
||||
|
||||
/** A moeoObjectiveVectorComparator based on Pareto dominance (used as default) */
|
||||
moeoParetoObjectiveVectorComparator < ObjectiveVector > paretoComparator;
|
||||
|
||||
/** epsilon values */
|
||||
std::vector <double> epsilon;
|
||||
|
||||
/** ideal point of the archive */
|
||||
ObjectiveVector ideal;
|
||||
/** nadir point of the archive */
|
||||
ObjectiveVector nadir;
|
||||
|
||||
/** bounds use by default to initialize the normalizer */
|
||||
eoRealInterval bounds;
|
||||
|
||||
/** the objective vector normalizer */
|
||||
moeoObjectiveVectorNormalizer <MOEOT> normalizer;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOEPSILONBOXARCHIVE_H_*/
|
||||
174
trunk/moeo/src/archive/moeoFitDivBoundedArchive.h
Normal file
174
trunk/moeo/src/archive/moeoFitDivBoundedArchive.h
Normal file
|
|
@ -0,0 +1,174 @@
|
|||
/*
|
||||
* <moeoFitDivBoundedArchive.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Lille-Nord Europe, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jeremie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
// moeoFitDivBoundedArchive.h
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOFITDIVBOUNDEDARCHIVE_H_
|
||||
#define MOEOFITDIVBOUNDEDARCHIVE_H_
|
||||
|
||||
#include <list>
|
||||
#include <eoPop.h>
|
||||
#include <comparator/moeoComparator.h>
|
||||
#include <comparator/moeoObjectiveVectorComparator.h>
|
||||
#include <diversity/moeoDiversityAssignment.h>
|
||||
#include <fitness/moeoFitnessAssignment.h>
|
||||
|
||||
/**
|
||||
* This class represents a bounded archive which different parameters to specify.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoFitDivBoundedArchive : public moeoBoundedArchive < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
using moeoArchive < MOEOT > :: size;
|
||||
using moeoArchive < MOEOT > :: resize;
|
||||
using moeoArchive < MOEOT > :: operator[];
|
||||
using moeoArchive < MOEOT > :: back;
|
||||
using moeoArchive < MOEOT > :: pop_back;
|
||||
using moeoArchive < MOEOT > :: push_back;
|
||||
using moeoArchive < MOEOT > :: begin;
|
||||
using moeoArchive < MOEOT > :: end;
|
||||
using moeoArchive < MOEOT > :: replace;
|
||||
using moeoBoundedArchive < MOEOT > :: maxSize;
|
||||
|
||||
|
||||
/**
|
||||
* The type of an objective vector for a solution
|
||||
*/
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own moeoComparator, moeoObjectiveVectorComparator, moeoFitnessAssignment, moeoDiversityAssignment and archive size.
|
||||
* @param _indiComparator the functor used to compare MOEOT
|
||||
* @param _comparator the functor used to compare objective vectors
|
||||
* @param _fitness the assignment fitness method
|
||||
* @param _diversity the diversity assignment method
|
||||
* @param _maxSize the size of archive (must be smaller or egal to the population size)
|
||||
* @param _replace boolean which determine if a solution with the same objectiveVector than another one, can replace it or not
|
||||
*/
|
||||
moeoFitDivBoundedArchive(moeoComparator < MOEOT > & _indiComparator, moeoObjectiveVectorComparator < ObjectiveVector > & _comparator, moeoFitnessAssignment < MOEOT > & _fitness, moeoDiversityAssignment < MOEOT > & _diversity, unsigned int _maxSize=100, bool _replace=true) : moeoBoundedArchive < MOEOT >(_comparator, _maxSize, _replace), indiComparator(_indiComparator), fitness(_fitness), diversity(_diversity)
|
||||
{}
|
||||
|
||||
/**
|
||||
* Ctor with moeoParetoObjectiveVectorComparator where you can choose your own moeoComparator, moeoFitnessAssignment, moeoDiversityAssignment and archive size.
|
||||
* @param _indiComparator the functor used to compare MOEOT
|
||||
* @param _fitness the assignment fitness method
|
||||
* @param _diversity the diversity assignment method
|
||||
* @param _maxSize the size of archive (must be smaller or egal to the population size)
|
||||
* @param _replace boolean which determine if a solution with the same objectiveVector than another one, can replace it or not
|
||||
*/
|
||||
moeoFitDivBoundedArchive(moeoComparator < MOEOT > & _indiComparator, moeoFitnessAssignment < MOEOT > & _fitness, moeoDiversityAssignment < MOEOT > & _diversity, unsigned int _maxSize=100, bool _replace=true) : moeoBoundedArchive < MOEOT >(_maxSize, _replace), indiComparator(_indiComparator), fitness(_fitness), diversity(_diversity)
|
||||
{}
|
||||
|
||||
/**
|
||||
* Updates the archive with a given individual _moeo
|
||||
* @param _moeo the given individual
|
||||
* @return true if _moeo is non-dominated (and not if it is added to the archive)
|
||||
*/
|
||||
bool operator()(const MOEOT & _moeo)
|
||||
{
|
||||
bool res;
|
||||
res = this->update(_moeo);
|
||||
|
||||
if(size() > maxSize){
|
||||
fitness(*this);
|
||||
diversity(*this);
|
||||
std::sort(begin(), end(), indiComparator);
|
||||
resize(maxSize);
|
||||
}
|
||||
return res;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Updates the archive with a given population _pop
|
||||
* @param _pop the given population
|
||||
* @return true if a _pop[i] is non-dominated (and not if it is added to the archive)
|
||||
*/
|
||||
bool operator()(const eoPop < MOEOT > & _pop)
|
||||
{
|
||||
bool res;
|
||||
res = this->update(_pop);
|
||||
|
||||
if(size() > maxSize){
|
||||
fitness(*this);
|
||||
diversity(*this);
|
||||
std::sort(begin(), end(), indiComparator);
|
||||
resize(maxSize);
|
||||
}
|
||||
return res;
|
||||
}
|
||||
|
||||
private:
|
||||
/**
|
||||
* Wrapper which allow to used an moeoComparator in std::sort
|
||||
* @param _comp the comparator to used
|
||||
*/
|
||||
class Wrapper
|
||||
{
|
||||
public:
|
||||
/**
|
||||
* Ctor.
|
||||
* @param _comp the comparator
|
||||
*/
|
||||
Wrapper(moeoComparator < MOEOT > & _comp) : comp(_comp) {}
|
||||
/**
|
||||
* Returns true if _moeo1 is greater than _moeo2 according to the comparator
|
||||
* _moeo1 the first individual
|
||||
* _moeo2 the first individual
|
||||
*/
|
||||
bool operator()(const MOEOT & _moeo1, const MOEOT & _moeo2)
|
||||
{
|
||||
return comp(_moeo1,_moeo2);
|
||||
}
|
||||
private:
|
||||
/** the comparator */
|
||||
moeoComparator < MOEOT > & comp;
|
||||
}
|
||||
indiComparator;
|
||||
|
||||
/** fitness assignment */
|
||||
moeoFitnessAssignment < MOEOT > & fitness;
|
||||
/** diversity assignment */
|
||||
moeoDiversityAssignment < MOEOT > & diversity;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOFITDIVBOUNDEDARCHIVE_H_*/
|
||||
80
trunk/moeo/src/archive/moeoFixedSizeArchive.h
Normal file
80
trunk/moeo/src/archive/moeoFixedSizeArchive.h
Normal file
|
|
@ -0,0 +1,80 @@
|
|||
/*
|
||||
* <moeoFixedSizeArchive.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Lille-Nord Europe, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jeremie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
// moeoFixedSizeArchive.h
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOFIXEDSIZEARCHIVE_H_
|
||||
#define MOEOFIXEDSIZEARCHIVE_H_
|
||||
|
||||
#include <eoPop.h>
|
||||
#include <archive/moeoArchive.h>
|
||||
#include <comparator/moeoObjectiveVectorComparator.h>
|
||||
|
||||
/**
|
||||
* Abstract class for representing a fixed size archive ;
|
||||
* a fixed size archive is an archive containing a given number of solutions.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoFixedSizeArchive : public moeoArchive < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* The type of an objective vector for a solution
|
||||
*/
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Default ctor.
|
||||
* The moeoObjectiveVectorComparator used to compare solutions is based on Pareto dominance
|
||||
* @param _replace boolean which determine if a solution with the same objectiveVector than another one, can replace it or not
|
||||
*/
|
||||
moeoFixedSizeArchive(bool _replace=true) : moeoArchive < MOEOT >(_replace) {}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor
|
||||
* @param _comparator the moeoObjectiveVectorComparator used to compare solutions
|
||||
* @param _replace boolean which determine if a solution with the same objectiveVector than another one, can replace it or not
|
||||
*/
|
||||
moeoFixedSizeArchive(moeoObjectiveVectorComparator < ObjectiveVector > & _comparator, bool _replace=true) : moeoArchive < MOEOT >( _comparator, _replace) {}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOFIXEDSIZEARCHIVE_H_*/
|
||||
170
trunk/moeo/src/archive/moeoImprOnlyBoundedArchive.h
Normal file
170
trunk/moeo/src/archive/moeoImprOnlyBoundedArchive.h
Normal file
|
|
@ -0,0 +1,170 @@
|
|||
/*
|
||||
* <moeoImprOnlyBoundedArchive.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Lille-Nord Europe, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jeremie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
// moeoIMPRONLYBOUNDEDARCHIVE.h
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOImprOnlyBoundedArchive_H_
|
||||
#define MOEOImprOnlyBoundedArchive_H_
|
||||
|
||||
#include <archive/moeoBoundedArchive.h>
|
||||
#include <archive/moeoArchive.h>
|
||||
/**
|
||||
* This class represents a bounded archive which different parameters to specify.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoImprOnlyBoundedArchive : public moeoBoundedArchive < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
using moeoArchive < MOEOT > :: size;
|
||||
using moeoArchive < MOEOT > :: resize;
|
||||
using moeoArchive < MOEOT > :: operator[];
|
||||
using moeoArchive < MOEOT > :: back;
|
||||
using moeoArchive < MOEOT > :: pop_back;
|
||||
using moeoArchive < MOEOT > :: push_back;
|
||||
using moeoArchive < MOEOT > :: begin;
|
||||
using moeoArchive < MOEOT > :: end;
|
||||
using moeoArchive < MOEOT > :: replace;
|
||||
using moeoBoundedArchive < MOEOT > :: maxSize;
|
||||
|
||||
|
||||
/**
|
||||
* The type of an objective vector for a solution
|
||||
*/
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own moeoComparator and archive size.
|
||||
* @param _comparator the functor used to compare objective vectors
|
||||
* @param _maxSize the size of archive (must be smaller or egal to the population size)
|
||||
* @param _replace boolean which determine if a solution with the same objectiveVector than another one, can replace it or not
|
||||
*/
|
||||
moeoImprOnlyBoundedArchive(moeoObjectiveVectorComparator < ObjectiveVector > & _comparator, unsigned int _maxSize=100, bool _replace=true) : moeoBoundedArchive < MOEOT >(_comparator, _maxSize, _replace){}
|
||||
|
||||
/**
|
||||
* Ctor with moeoParetoObjectiveVectorComparator where you can choose your own archive size.
|
||||
* @param _maxSize the size of archive (must be smaller or egal to the population size)
|
||||
* @param _replace boolean which determine if a solution with the same objectiveVector than another one, can replace it or not
|
||||
*/
|
||||
moeoImprOnlyBoundedArchive(unsigned int _maxSize=100, bool _replace=true) : moeoBoundedArchive < MOEOT >(_maxSize, _replace){}
|
||||
|
||||
/**
|
||||
* Updates the archive with a given individual _moeo
|
||||
* @param _moeo the given individual
|
||||
* @return true if _moeo is non-dominated (and not if it is added to the archive)
|
||||
*/
|
||||
bool operator()(const MOEOT & _moeo)
|
||||
{
|
||||
return update(_moeo);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Updates the archive with a given population _pop
|
||||
* @param _pop the given population
|
||||
* @return true if a _pop[i] is non-dominated (and not if it is added to the archive)
|
||||
*/
|
||||
bool operator()(const eoPop < MOEOT > & _pop)
|
||||
{
|
||||
bool res = false;
|
||||
bool tmp = false;
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
tmp = (*this).update(_pop[i]);
|
||||
res = tmp || res;
|
||||
}
|
||||
return res;
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
/**
|
||||
* Updates the archive with a given individual _moeo *** NEW ***
|
||||
* @param _moeo the given individual
|
||||
*/
|
||||
bool update(const MOEOT & _moeo)
|
||||
{
|
||||
// first step: removing the dominated solutions from the archive
|
||||
for (unsigned int j=0; j<size();)
|
||||
{
|
||||
// if the jth solution contained in the archive is dominated by _moeo
|
||||
if ( this->comparator(operator[](j).objectiveVector(), _moeo.objectiveVector()) )
|
||||
{
|
||||
operator[](j) = back();
|
||||
pop_back();
|
||||
}
|
||||
else if (replace && (_moeo.objectiveVector() == operator[](j).objectiveVector()))
|
||||
{
|
||||
operator[](j) = back();
|
||||
pop_back();
|
||||
}
|
||||
else
|
||||
{
|
||||
j++;
|
||||
}
|
||||
}
|
||||
// second step: is _moeo dominated?
|
||||
bool dom = false;
|
||||
for (unsigned int j=0; j<size(); j++)
|
||||
{
|
||||
// if _moeo is dominated by the jth solution contained in the archive
|
||||
if ( this->comparator(_moeo.objectiveVector(), operator[](j).objectiveVector()) )
|
||||
{
|
||||
dom = true;
|
||||
break;
|
||||
}
|
||||
else if (!replace && (_moeo.objectiveVector() == operator[](j).objectiveVector()) )
|
||||
{
|
||||
dom = true;
|
||||
break;
|
||||
}
|
||||
}
|
||||
if (!dom)
|
||||
{
|
||||
if(size()<maxSize)
|
||||
push_back(_moeo);
|
||||
else
|
||||
dom=!dom;
|
||||
}
|
||||
return !dom;
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOIMPRONLYBOUNDEDARCHIVE_H_*/
|
||||
386
trunk/moeo/src/archive/moeoSPEA2Archive.h
Normal file
386
trunk/moeo/src/archive/moeoSPEA2Archive.h
Normal file
|
|
@ -0,0 +1,386 @@
|
|||
/*
|
||||
* <moeoSPEA2Archive.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Lille-Nord Europe, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jeremie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
// moeoSPEA2Archive.h
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOSPEA2ARCHIVE_H_
|
||||
#define MOEOSPEA2ARCHIVE_H_
|
||||
|
||||
#include <limits>
|
||||
#include <list>
|
||||
#include <eoPop.h>
|
||||
#include <archive/moeoFixedSizeArchive.h>
|
||||
#include <comparator/moeoComparator.h>
|
||||
#include <comparator/moeoFitnessThenDiversityComparator.h>
|
||||
#include <comparator/moeoObjectiveVectorComparator.h>
|
||||
#include <distance/moeoDistance.h>
|
||||
#include <distance/moeoEuclideanDistance.h>
|
||||
|
||||
/**
|
||||
* This class represents a bounded archive as defined in the SPEA2 algorithm.
|
||||
* E. Zitzler, M. Laumanns, and L. Thiele. SPEA2: Improving the Strength Pareto Evolutionary Algorithm. Technical Report 103,
|
||||
* Computer Engineering and Networks Laboratory (TIK), ETH Zurich, Zurich, Switzerland, 2001.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoSPEA2Archive : public moeoFixedSizeArchive < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
using moeoFixedSizeArchive < MOEOT > :: size;
|
||||
using moeoFixedSizeArchive < MOEOT > :: resize;
|
||||
using moeoFixedSizeArchive < MOEOT > :: operator[];
|
||||
using moeoFixedSizeArchive < MOEOT > :: back;
|
||||
using moeoFixedSizeArchive < MOEOT > :: pop_back;
|
||||
using moeoFixedSizeArchive < MOEOT > :: push_back;
|
||||
using moeoFixedSizeArchive < MOEOT > :: begin;
|
||||
using moeoFixedSizeArchive < MOEOT > :: end;
|
||||
|
||||
|
||||
/**
|
||||
* The type of an objective vector for a solution
|
||||
*/
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Default ctor.
|
||||
* @param _maxSize the size of archive (must be smaller or equal to the population size)
|
||||
*/
|
||||
moeoSPEA2Archive(unsigned int _maxSize=100): moeoFixedSizeArchive < MOEOT >(true), maxSize(_maxSize), borne(0), indiComparator(defaultComparator), distance(defaultDistance)
|
||||
{}
|
||||
|
||||
|
||||
/**l
|
||||
* Ctor where you can choose your own moeoDistance
|
||||
* @param _dist the distance used
|
||||
* @param _maxSize the size of archive (must be smaller or egal to the population size)
|
||||
*/
|
||||
moeoSPEA2Archive(moeoDistance <MOEOT, double>& _dist, unsigned int _maxSize=100): moeoFixedSizeArchive < MOEOT >(true), maxSize(_maxSize), borne(0), indiComparator(defaultComparator), distance(_dist)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own moeoObjectiveVectorComparator
|
||||
* @param _comparator the functor used to compare objective vectors
|
||||
* @param _maxSize the size of archive (must be smaller or egal to the population size)
|
||||
*/
|
||||
moeoSPEA2Archive(moeoObjectiveVectorComparator < ObjectiveVector > & _comparator, unsigned int _maxSize=100): moeoFixedSizeArchive < MOEOT >(_comparator, true), maxSize(_maxSize), borne(0), indiComparator(defaultComparator), distance(defaultDistance)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own moeoComparator
|
||||
* @param _indiComparator the functor used to compare MOEOT
|
||||
* @param _maxSize the size of archive (must be smaller or egal to the population size)
|
||||
*/
|
||||
moeoSPEA2Archive(moeoComparator <MOEOT>& _indiComparator, unsigned int _maxSize=100): moeoFixedSizeArchive < MOEOT >(true), maxSize(_maxSize), borne(0), indiComparator(_indiComparator), distance(defaultDistance)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own moeoComparator, moeoDistance and moeoObjectiveVectorComparator
|
||||
* @param _indiComparator the functor used to compare MOEOT
|
||||
* @param _dist the distance used
|
||||
* @param _comparator the functor used to compare objective vectors
|
||||
* @param _maxSize the size of archive (must be smaller or egal to the population size)
|
||||
*/
|
||||
moeoSPEA2Archive(moeoComparator <MOEOT>& _indiComparator, moeoDistance <MOEOT, double>& _dist, moeoObjectiveVectorComparator < ObjectiveVector > & _comparator, unsigned int _maxSize=100) : moeoFixedSizeArchive < MOEOT >(_comparator, true), maxSize(_maxSize), borne(0), indiComparator(_indiComparator), distance(_dist)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Updates the archive with a given individual _moeo
|
||||
* @param _moeo the given individual
|
||||
* @return true (TODO)
|
||||
*/
|
||||
bool operator()(const MOEOT & _moeo)
|
||||
{
|
||||
eoPop < MOEOT > pop_tmp;
|
||||
pop_tmp.push_back(_moeo);
|
||||
operator()(pop_tmp);
|
||||
return true;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Updates the archive with a given population _pop
|
||||
* @param _pop the given population
|
||||
* @return true (TODO)
|
||||
*/
|
||||
bool operator()(const eoPop < MOEOT > & _pop)
|
||||
{
|
||||
unsigned int i;
|
||||
unsigned int foo=0;
|
||||
|
||||
//Creation of the vector that contains minimal pop's informations
|
||||
std::vector<struct refpop> copy_pop(_pop.size());
|
||||
for (i=0;i<_pop.size(); i++)
|
||||
{
|
||||
copy_pop[i].index=i;
|
||||
copy_pop[i].fitness=_pop[i].fitness();
|
||||
copy_pop[i].diversity=_pop[i].diversity();
|
||||
}
|
||||
|
||||
//Sort this vector in decrease order of fitness+diversity
|
||||
std::sort(copy_pop.begin(), copy_pop.end(), Cmp());
|
||||
|
||||
//If the archive is empty, put in the best elements of the pop
|
||||
if (borne < maxSize)
|
||||
{
|
||||
foo= std::min((unsigned int)_pop.size(), maxSize-borne);
|
||||
for (i=0; i< foo ; i++)
|
||||
{
|
||||
push_back(_pop[copy_pop[i].index]);
|
||||
borne++;
|
||||
}
|
||||
|
||||
}
|
||||
else
|
||||
{
|
||||
unsigned int j=0;
|
||||
//Sort the archive
|
||||
std::sort(begin(), end(), indiComparator);
|
||||
i=0;
|
||||
|
||||
//While we have a better element in pop than the worst <= -1 in the archive, replace the worst(of archive) by the best(of pop)
|
||||
while ( (i<borne) && ( (operator[](i).fitness()+operator[](i).diversity()) < (copy_pop[j].fitness + copy_pop[j].diversity) ) && (operator[](i).fitness()<=-1) && ( j < copy_pop.size() ) )
|
||||
{
|
||||
operator[](i)= back();
|
||||
pop_back();
|
||||
push_back(_pop[copy_pop[j].index]);
|
||||
i++;
|
||||
j++;
|
||||
}
|
||||
|
||||
//If their are others goods elements in pop (fitness=0) , keep only archive's size elements between the archive's elements and the good element in the pop (k ieme smallest distance is used)
|
||||
if (copy_pop[j].fitness > -1)
|
||||
{
|
||||
unsigned int inf=j;
|
||||
unsigned int p;
|
||||
unsigned int k=0;
|
||||
unsigned int l=0;
|
||||
double tmp=0;
|
||||
unsigned int tmp2=0;
|
||||
|
||||
//search bounds of copy_pop where are the goods elements
|
||||
while ((j < copy_pop.size()) && (copy_pop[j].fitness > -1.0))
|
||||
j++;
|
||||
|
||||
p=j-inf;
|
||||
|
||||
std::vector< std::vector< std::pair<int,double> > > matrice(borne+p);
|
||||
|
||||
//Build the distance matrice(vector of vector) between each keeped elements
|
||||
if (borne+p>0)
|
||||
{
|
||||
for (k=0; k<borne+p-1; k++)
|
||||
{
|
||||
for (l=k+1; l<borne+p; l++)
|
||||
{
|
||||
if ( (k<borne) && (l<borne) )
|
||||
tmp=distance(operator[](k), operator[](l));
|
||||
else if ( (k<borne) && (l>=borne) )
|
||||
tmp=distance(operator[](k), _pop[copy_pop[l-borne+inf].index]);
|
||||
else
|
||||
tmp=distance(_pop[copy_pop[k-borne+inf].index], _pop[copy_pop[l-borne+inf].index]);
|
||||
|
||||
matrice[k].push_back(std::pair<int,double>(l,tmp));
|
||||
matrice[l].push_back(std::pair<int,double>(k,tmp));
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
for (k=0; k<borne+p; k++)
|
||||
{
|
||||
//sort each line of the matrice
|
||||
std::sort(matrice[k].begin(),matrice[k].end(), CmpPair());
|
||||
|
||||
//insert an indice at the end of each line after they were be sorted
|
||||
matrice[k].push_back(std::pair<int,double>(-1,k));
|
||||
}
|
||||
|
||||
//sort the lines of the matrice between us (by shortest distance)
|
||||
std::sort(matrice.begin(),matrice.end(), CmpVector());
|
||||
|
||||
//vectors and iterators used to replace some archive element by some pop element
|
||||
std::vector<unsigned int> notkeeped;
|
||||
std::vector<unsigned int> keeped;
|
||||
std::vector< std::vector< std::pair<int,double> > >::iterator matrice_it=matrice.begin();
|
||||
std::vector< std::pair<int,double> >::iterator it;
|
||||
|
||||
//search elements of the archive to delete
|
||||
for (k=0; k<p; k++)
|
||||
{
|
||||
tmp2=(unsigned int)matrice[0].back().second;
|
||||
if (tmp2<borne)
|
||||
notkeeped.push_back(tmp2);
|
||||
matrice.erase(matrice_it);
|
||||
for (l=0; l<matrice.size(); l++)
|
||||
{
|
||||
it=matrice[l].begin();
|
||||
while ((unsigned int)(*it).first != tmp2)
|
||||
it++;
|
||||
matrice[l].erase(it);
|
||||
}
|
||||
if (k != (p-1))
|
||||
std::sort(matrice.begin(),matrice.end(), CmpVector());
|
||||
}
|
||||
|
||||
//search elements of pop to put in archive
|
||||
for (k=0; k<borne; k++)
|
||||
{
|
||||
tmp2=(unsigned int)matrice[k].back().second;
|
||||
if (tmp2 >= borne)
|
||||
keeped.push_back(tmp2);
|
||||
}
|
||||
|
||||
//replace some archive element by some pop element
|
||||
for (k=0; k<keeped.size(); k++)
|
||||
{
|
||||
push_back( _pop[ copy_pop[keeped[k]-borne+inf].index ] );
|
||||
operator[](notkeeped[k]) = back();
|
||||
pop_back();
|
||||
}
|
||||
}
|
||||
}
|
||||
return true;
|
||||
}//endoperator()
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/** archive max size */
|
||||
unsigned int maxSize;
|
||||
/** archive size */
|
||||
unsigned int borne;
|
||||
/**
|
||||
* Wrapper which allow to used an moeoComparator in std::sort
|
||||
* @param _comp the comparator to used
|
||||
*/
|
||||
class Wrapper
|
||||
{
|
||||
public:
|
||||
/**
|
||||
* Ctor.
|
||||
* @param _comp the comparator
|
||||
*/
|
||||
Wrapper(moeoComparator < MOEOT > & _comp) : comp(_comp) {}
|
||||
/**
|
||||
* Returns true if _moeo1 is greater than _moeo2 according to the comparator
|
||||
* _moeo1 the first individual
|
||||
* _moeo2 the first individual
|
||||
*/
|
||||
bool operator()(const MOEOT & _moeo1, const MOEOT & _moeo2)
|
||||
{
|
||||
return comp(_moeo1,_moeo2);
|
||||
}
|
||||
private:
|
||||
/** the comparator */
|
||||
moeoComparator < MOEOT > & comp;
|
||||
}
|
||||
indiComparator;
|
||||
/** default moeoComparator*/
|
||||
moeoFitnessThenDiversityComparator < MOEOT > defaultComparator;
|
||||
/** distance */
|
||||
moeoDistance <MOEOT, double>& distance;
|
||||
/** default distance */
|
||||
moeoEuclideanDistance < MOEOT > defaultDistance;
|
||||
|
||||
|
||||
/**
|
||||
* Structure needs to copy informations of the pop in order to sort it
|
||||
*/
|
||||
struct refpop
|
||||
{
|
||||
unsigned int index;
|
||||
double fitness;
|
||||
double diversity;
|
||||
};
|
||||
|
||||
|
||||
/**
|
||||
* Comparator of struct refpop : compare fitness+divesity
|
||||
*/
|
||||
struct Cmp
|
||||
{
|
||||
bool operator()(const struct refpop& _a, const struct refpop& _b)
|
||||
{
|
||||
return ( (_a.diversity + _a.fitness) > (_b.diversity + _b.fitness) );
|
||||
}
|
||||
};
|
||||
|
||||
|
||||
/**
|
||||
* Comparator of two vector of pair
|
||||
* Compare the second pair's value of the first element vector, if equals compare the next element vector...
|
||||
*/
|
||||
struct CmpVector
|
||||
{
|
||||
bool operator()( const std::vector< std::pair<int,double> >& _a, const std::vector< std::pair<int,double> >& _b)
|
||||
{
|
||||
std::vector< std::pair<int,double> >::const_iterator it1= _a.begin();
|
||||
std::vector< std::pair<int,double> >::const_iterator it2= _b.begin();
|
||||
while ( (it1 != _a.end()) && (it2 != _b.end()))
|
||||
{
|
||||
if ((*it1).second < (*it2).second)
|
||||
return true;
|
||||
else if ((*it1).second > (*it2).second)
|
||||
return false;
|
||||
it1++;
|
||||
it2++;
|
||||
}
|
||||
return true;
|
||||
}
|
||||
};
|
||||
|
||||
|
||||
/**
|
||||
* Comparator of two pair : compare the second pair's value
|
||||
*/
|
||||
struct CmpPair
|
||||
{
|
||||
bool operator()(const std::pair<int,double>& _a, const std::pair<int,double>& _b)
|
||||
{
|
||||
return _a.second < _b.second;
|
||||
}
|
||||
};
|
||||
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOSPEA2ARCHIVE_H_*/
|
||||
100
trunk/moeo/src/archive/moeoUnboundedArchive.h
Normal file
100
trunk/moeo/src/archive/moeoUnboundedArchive.h
Normal file
|
|
@ -0,0 +1,100 @@
|
|||
/*
|
||||
* <moeoUnboundedArchive.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Lille-Nord Europe, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jeremie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
// moeoUnboundedArchive.h
|
||||
//-----------------------------------------------------------------------------
|
||||
#ifndef MOEOUNBOUNDEDARCHIVE_H_
|
||||
#define MOEOUNBOUNDEDARCHIVE_H_
|
||||
|
||||
#include <eoPop.h>
|
||||
#include <archive/moeoArchive.h>
|
||||
#include <comparator/moeoObjectiveVectorComparator.h>
|
||||
|
||||
/**
|
||||
* An unbounded archive is an archive storing an unbounded number of non-dominated solutions.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoUnboundedArchive : public moeoArchive < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* The type of an objective vector for a solution
|
||||
*/
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Default ctor.
|
||||
* The moeoObjectiveVectorComparator used to compare solutions is based on Pareto dominance
|
||||
* @param _replace boolean which determine if a solution with the same objectiveVector than another one, can replace it or not
|
||||
*/
|
||||
moeoUnboundedArchive(bool _replace=true) : moeoArchive < MOEOT >(_replace) {}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor
|
||||
* @param _comparator the moeoObjectiveVectorComparator used to compare solutions
|
||||
* @param _replace boolean which determine if a solution with the same objectiveVector than another one, can replace it or not
|
||||
*/
|
||||
moeoUnboundedArchive(moeoObjectiveVectorComparator < ObjectiveVector > & _comparator, bool _replace=true) : moeoArchive < MOEOT >(_comparator, _replace) {}
|
||||
|
||||
|
||||
/**
|
||||
* Updates the archive with a given individual _moeo
|
||||
* @param _moeo the given individual
|
||||
* @return true if _moeo is added to the archive
|
||||
*/
|
||||
bool operator()(const MOEOT & _moeo)
|
||||
{
|
||||
return this->update(_moeo);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Updates the archive with a given population _pop
|
||||
* @param _pop the given population
|
||||
* @return true if a _pop[i] is added to the archive
|
||||
*/
|
||||
bool operator()(const eoPop < MOEOT > & _pop)
|
||||
{
|
||||
return this->update(_pop);
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOUNBOUNDEDARCHIVE_H_*/
|
||||
80
trunk/moeo/src/comparator/moeoAggregativeComparator.h
Normal file
80
trunk/moeo/src/comparator/moeoAggregativeComparator.h
Normal file
|
|
@ -0,0 +1,80 @@
|
|||
/*
|
||||
* <moeoAggregativeComparator.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOAGGREGATIVECOMPARATOR_H_
|
||||
#define MOEOAGGREGATIVECOMPARATOR_H_
|
||||
|
||||
#include <comparator/moeoComparator.h>
|
||||
|
||||
/**
|
||||
* Functor allowing to compare two solutions according to their fitness and diversity values, each according to its aggregative value.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoAggregativeComparator : public moeoComparator < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Ctor.
|
||||
* @param _weightFitness the weight for fitness
|
||||
* @param _weightDiversity the weight for diversity
|
||||
*/
|
||||
moeoAggregativeComparator(double _weightFitness = 1.0, double _weightDiversity = 1.0) : weightFitness(_weightFitness), weightDiversity(_weightDiversity)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if _moeo1 < _moeo2 according to the aggregation of their fitness and diversity values
|
||||
* @param _moeo1 the first solution
|
||||
* @param _moeo2 the second solution
|
||||
*/
|
||||
const bool operator()(const MOEOT & _moeo1, const MOEOT & _moeo2)
|
||||
{
|
||||
return ( weightFitness * _moeo1.fitness() + weightDiversity * _moeo1.diversity() ) < ( weightFitness * _moeo2.fitness() + weightDiversity * _moeo2.diversity() );
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/** the weight for fitness */
|
||||
double weightFitness;
|
||||
/** the weight for diversity */
|
||||
double weightDiversity;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOAGGREGATIVECOMPARATOR_H_*/
|
||||
50
trunk/moeo/src/comparator/moeoComparator.h
Normal file
50
trunk/moeo/src/comparator/moeoComparator.h
Normal file
|
|
@ -0,0 +1,50 @@
|
|||
/*
|
||||
* <moeoComparator.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOCOMPARATOR_H_
|
||||
#define MOEOCOMPARATOR_H_
|
||||
|
||||
#include <eoFunctor.h>
|
||||
|
||||
/**
|
||||
* Functor allowing to compare two solutions.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoComparator : public eoBF < const MOEOT &, const MOEOT &, const bool >
|
||||
{};
|
||||
|
||||
#endif /*MOEOCOMPARATOR_H_*/
|
||||
|
|
@ -0,0 +1,70 @@
|
|||
/*
|
||||
* <moeoDiversityThenFitnessComparator.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEODIVERSITYTHENFITNESSCOMPARATOR_H_
|
||||
#define MOEODIVERSITYTHENFITNESSCOMPARATOR_H_
|
||||
|
||||
#include <comparator/moeoComparator.h>
|
||||
|
||||
/**
|
||||
* Functor allowing to compare two solutions according to their diversity values, then according to their fitness values.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoDiversityThenFitnessComparator : public moeoComparator < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Returns true if _moeo1 < _moeo2 according to their diversity values, then according to their fitness values
|
||||
* @param _moeo1 the first solution
|
||||
* @param _moeo2 the second solution
|
||||
*/
|
||||
const bool operator()(const MOEOT & _moeo1, const MOEOT & _moeo2)
|
||||
{
|
||||
if (_moeo1.diversity() == _moeo2.diversity())
|
||||
{
|
||||
return _moeo1.fitness() < _moeo2.fitness();
|
||||
}
|
||||
else
|
||||
{
|
||||
return _moeo1.diversity() < _moeo2.diversity();
|
||||
}
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEODIVERSITYTHENFITNESSCOMPARATOR_H_*/
|
||||
|
|
@ -0,0 +1,94 @@
|
|||
/*
|
||||
* <moeoEpsilonObjectiveVectorComparator.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOEPSILONOBJECTIVEVECTORCOMPARATOR_H_
|
||||
#define MOEOEPSILONOBJECTIVEVECTORCOMPARATOR_H_
|
||||
|
||||
#include <comparator/moeoObjectiveVectorComparator.h>
|
||||
|
||||
/**
|
||||
* This functor class allows to compare 2 objective vectors according to epsilon dominance.
|
||||
*/
|
||||
template < class ObjectiveVector >
|
||||
class moeoEpsilonObjectiveVectorComparator : public moeoObjectiveVectorComparator < ObjectiveVector >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Ctor.
|
||||
* @param _epsilon the epsilon value
|
||||
*/
|
||||
moeoEpsilonObjectiveVectorComparator(double _epsilon) : epsilon(_epsilon)
|
||||
{}
|
||||
|
||||
/**
|
||||
* Returns true if _objectiveVector1 is epsilon-dominated by _objectiveVector2
|
||||
* @param _objectiveVector1 the first objective vector
|
||||
* @param _objectiveVector2 the second objective vector
|
||||
*/
|
||||
const bool operator()(const ObjectiveVector & _objectiveVector1, const ObjectiveVector & _objectiveVector2)
|
||||
{
|
||||
for (unsigned int i=0; i<ObjectiveVector::nObjectives(); i++)
|
||||
{
|
||||
// _objectiveVector1[i] == _objectiveVector2[i] ?
|
||||
if ( fabs((_objectiveVector1[i]/ epsilon) - _objectiveVector2[i]) > ObjectiveVector::Traits::tolerance() )
|
||||
{
|
||||
if (ObjectiveVector::minimizing(i))
|
||||
{
|
||||
if ((_objectiveVector1[i] / epsilon) <= _objectiveVector2[i])
|
||||
{
|
||||
return false; // _objectiveVector1[i] is not better than _objectiveVector2[i]
|
||||
}
|
||||
}
|
||||
else if (ObjectiveVector::maximizing(i))
|
||||
{
|
||||
if ((_objectiveVector1[i] / epsilon) >= _objectiveVector2[i])
|
||||
{
|
||||
return false; // _objectiveVector1[i] is not better than _objectiveVector2[i]
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
return true;
|
||||
}
|
||||
|
||||
private:
|
||||
/** the reference point */
|
||||
double epsilon;
|
||||
};
|
||||
|
||||
#endif /*MOEOEPSILONOBJECTIVEVECTORCOMPARATOR_H_*/
|
||||
64
trunk/moeo/src/comparator/moeoFitnessComparator.h
Executable file
64
trunk/moeo/src/comparator/moeoFitnessComparator.h
Executable file
|
|
@ -0,0 +1,64 @@
|
|||
/*
|
||||
* <moeoFitnessComparator.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* François Legillon
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOFITNESSCOMPARATOR_H_
|
||||
#define MOEOFITNESSCOMPARATOR_H_
|
||||
|
||||
#include <comparator/moeoComparator.h>
|
||||
|
||||
/**
|
||||
* Functor allowing to compare two solutions according to their fitness values
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoFitnessComparator : public moeoComparator < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Returns true if _moeo1 < _moeo2 according to their fitness values
|
||||
* @param _moeo1 the first solution
|
||||
* @param _moeo2 the second solution
|
||||
*/
|
||||
const bool operator()(const MOEOT & _moeo1, const MOEOT & _moeo2)
|
||||
{
|
||||
return _moeo1.fitness() < _moeo2.fitness();
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOFITNESSCOMPARATOR_H_*/
|
||||
|
|
@ -0,0 +1,70 @@
|
|||
/*
|
||||
* <moeoFitnessThenDiversityComparator.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOFITNESSTHENDIVERSITYCOMPARATOR_H_
|
||||
#define MOEOFITNESSTHENDIVERSITYCOMPARATOR_H_
|
||||
|
||||
#include <comparator/moeoComparator.h>
|
||||
|
||||
/**
|
||||
* Functor allowing to compare two solutions according to their fitness values, then according to their diversity values.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoFitnessThenDiversityComparator : public moeoComparator < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Returns true if _moeo1 < _moeo2 according to their fitness values, then according to their diversity values
|
||||
* @param _moeo1 the first solution
|
||||
* @param _moeo2 the second solution
|
||||
*/
|
||||
const bool operator()(const MOEOT & _moeo1, const MOEOT & _moeo2)
|
||||
{
|
||||
if (_moeo1.fitness() == _moeo2.fitness())
|
||||
{
|
||||
return _moeo1.diversity() < _moeo2.diversity();
|
||||
}
|
||||
else
|
||||
{
|
||||
return _moeo1.fitness() < _moeo2.fitness();
|
||||
}
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOFITNESSTHENDIVERSITYCOMPARATOR_H_*/
|
||||
|
|
@ -0,0 +1,127 @@
|
|||
/*
|
||||
* <moeoGDominanceObjectiveVectorComparator.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOGDOMINANCEOBJECTIVEVECTORCOMPARATOR_H_
|
||||
#define MOEOGDOMINANCEOBJECTIVEVECTORCOMPARATOR_H_
|
||||
|
||||
#include <comparator/moeoObjectiveVectorComparator.h>
|
||||
|
||||
/**
|
||||
* This functor class allows to compare 2 objective vectors according to g-dominance.
|
||||
* The concept of g-dominance as been introduced in:
|
||||
* J. Molina, L. V. Santana, A. G. Hernandez-Diaz, C. A. Coello Coello, R. Caballero,
|
||||
* "g-dominance: Reference point based dominance" (2007)
|
||||
*/
|
||||
template < class ObjectiveVector >
|
||||
class moeoGDominanceObjectiveVectorComparator : public moeoObjectiveVectorComparator < ObjectiveVector >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Ctor.
|
||||
* @param _ref the reference point
|
||||
*/
|
||||
moeoGDominanceObjectiveVectorComparator(ObjectiveVector & _ref) : ref(_ref)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if _objectiveVector1 is g-dominated by _objectiveVector2.
|
||||
* @param _objectiveVector1 the first objective vector
|
||||
* @param _objectiveVector2 the second objective vector
|
||||
*/
|
||||
const bool operator()(const ObjectiveVector & _objectiveVector1, const ObjectiveVector & _objectiveVector2)
|
||||
{
|
||||
unsigned int flag1 = flag(_objectiveVector1);
|
||||
unsigned int flag2 = flag(_objectiveVector2);
|
||||
if (flag2==0)
|
||||
{
|
||||
// cannot dominate
|
||||
return false;
|
||||
}
|
||||
else if ( (flag2==1) && (flag1==0) )
|
||||
{
|
||||
// is dominated
|
||||
return true;
|
||||
}
|
||||
else // (flag1==1) && (flag2==1)
|
||||
{
|
||||
// both are on the good region, so let's use the classical Pareto dominance
|
||||
return paretoComparator(_objectiveVector1, _objectiveVector2);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/** the reference point */
|
||||
ObjectiveVector & ref;
|
||||
/** Pareto comparator */
|
||||
moeoParetoObjectiveVectorComparator < ObjectiveVector > paretoComparator;
|
||||
|
||||
|
||||
/**
|
||||
* Returns the flag of _objectiveVector according to the reference point
|
||||
* @param _objectiveVector the first objective vector
|
||||
*/
|
||||
unsigned int flag(const ObjectiveVector & _objectiveVector)
|
||||
{
|
||||
unsigned int result=1;
|
||||
for (unsigned int i=0; i<ref.nObjectives(); i++)
|
||||
{
|
||||
if (_objectiveVector[i] > ref[i])
|
||||
{
|
||||
result=0;
|
||||
}
|
||||
}
|
||||
if (result==0)
|
||||
{
|
||||
result=1;
|
||||
for (unsigned int i=0; i<ref.nObjectives(); i++)
|
||||
{
|
||||
if (_objectiveVector[i] < ref[i])
|
||||
{
|
||||
result=0;
|
||||
}
|
||||
}
|
||||
}
|
||||
return result;
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOGDOMINANCEOBJECTIVEVECTORCOMPARATOR_H_*/
|
||||
|
|
@ -0,0 +1,77 @@
|
|||
/*
|
||||
* <moeoObjectiveObjectiveVectorComparator.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOOBJECTIVEOBJECTIVEVECTORCOMPARATOR_H_
|
||||
#define MOEOOBJECTIVEOBJECTIVEVECTORCOMPARATOR_H_
|
||||
|
||||
#include <comparator/moeoObjectiveVectorComparator.h>
|
||||
|
||||
/**
|
||||
* Functor allowing to compare two objective vectors according to their first objective value, then their second, and so on.
|
||||
*/
|
||||
template < class ObjectiveVector >
|
||||
class moeoObjectiveObjectiveVectorComparator : public moeoObjectiveVectorComparator < ObjectiveVector >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Returns true if _objectiveVector1 < _objectiveVector2 on the first objective, then on the second, and so on
|
||||
* @param _objectiveVector1 the first objective vector
|
||||
* @param _objectiveVector2 the second objective vector
|
||||
*/
|
||||
const bool operator()(const ObjectiveVector & _objectiveVector1, const ObjectiveVector & _objectiveVector2)
|
||||
{
|
||||
for (unsigned int i=0; i<ObjectiveVector::nObjectives(); i++)
|
||||
{
|
||||
if ( fabs(_objectiveVector1[i] - _objectiveVector2[i]) > ObjectiveVector::Traits::tolerance() )
|
||||
{
|
||||
if (_objectiveVector1[i] < _objectiveVector2[i])
|
||||
{
|
||||
return true;
|
||||
}
|
||||
else
|
||||
{
|
||||
return false;
|
||||
}
|
||||
}
|
||||
}
|
||||
return false;
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOOBJECTIVEOBJECTIVEVECTORCOMPARATOR_H_*/
|
||||
52
trunk/moeo/src/comparator/moeoObjectiveVectorComparator.h
Normal file
52
trunk/moeo/src/comparator/moeoObjectiveVectorComparator.h
Normal file
|
|
@ -0,0 +1,52 @@
|
|||
/*
|
||||
* <moeoObjectiveVectorComparator.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOOBJECTIVEVECTORCOMPARATOR_H_
|
||||
#define MOEOOBJECTIVEVECTORCOMPARATOR_H_
|
||||
|
||||
#include <math.h>
|
||||
#include <eoFunctor.h>
|
||||
|
||||
/**
|
||||
* Abstract class allowing to compare 2 objective vectors.
|
||||
* The template argument ObjectiveVector have to be a moeoObjectiveVector.
|
||||
*/
|
||||
template < class ObjectiveVector >
|
||||
class moeoObjectiveVectorComparator : public eoBF < const ObjectiveVector &, const ObjectiveVector &, const bool >
|
||||
{};
|
||||
|
||||
#endif /*MOEOOBJECTIVEVECTORCOMPARATOR_H_*/
|
||||
82
trunk/moeo/src/comparator/moeoOneObjectiveComparator.h
Normal file
82
trunk/moeo/src/comparator/moeoOneObjectiveComparator.h
Normal file
|
|
@ -0,0 +1,82 @@
|
|||
/*
|
||||
* <moeoOneObjectiveComparator.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOONEOBJECTIVECOMPARATOR_H_
|
||||
#define MOEOONEOBJECTIVECOMPARATOR_H_
|
||||
|
||||
#include <comparator/moeoComparator.h>
|
||||
|
||||
/**
|
||||
* Functor allowing to compare two solutions according to one objective.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoOneObjectiveComparator : public moeoComparator < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Ctor.
|
||||
* @param _obj the index of objective
|
||||
*/
|
||||
moeoOneObjectiveComparator(unsigned int _obj) : obj(_obj)
|
||||
{
|
||||
if (obj > MOEOT::ObjectiveVector::nObjectives())
|
||||
{
|
||||
throw std::runtime_error("Problem with the index of objective in moeoOneObjectiveComparator");
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if _moeo1 < _moeo2 on the obj objective
|
||||
* @param _moeo1 the first solution
|
||||
* @param _moeo2 the second solution
|
||||
*/
|
||||
const bool operator()(const MOEOT & _moeo1, const MOEOT & _moeo2)
|
||||
{
|
||||
return _moeo1.objectiveVector()[obj] < _moeo2.objectiveVector()[obj];
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/** the index of objective */
|
||||
unsigned int obj;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOONEOBJECTIVECOMPARATOR_H_*/
|
||||
|
|
@ -0,0 +1,95 @@
|
|||
/*
|
||||
* <moeoParetoObjectiveVectorComparator.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOPARETOOBJECTIVEVECTORCOMPARATOR_H_
|
||||
#define MOEOPARETOOBJECTIVEVECTORCOMPARATOR_H_
|
||||
|
||||
#include <comparator/moeoObjectiveVectorComparator.h>
|
||||
|
||||
/**
|
||||
* This functor class allows to compare 2 objective vectors according to Pareto dominance.
|
||||
*/
|
||||
template < class ObjectiveVector >
|
||||
class moeoParetoObjectiveVectorComparator : public moeoObjectiveVectorComparator < ObjectiveVector >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Returns true if _objectiveVector1 is dominated by _objectiveVector2
|
||||
* @param _objectiveVector1 the first objective vector
|
||||
* @param _objectiveVector2 the second objective vector
|
||||
*/
|
||||
const bool operator()(const ObjectiveVector & _objectiveVector1, const ObjectiveVector & _objectiveVector2)
|
||||
{
|
||||
bool dom = false;
|
||||
for (unsigned int i=0; i<ObjectiveVector::nObjectives(); i++)
|
||||
{
|
||||
// first, we have to check if the 2 objective values are not equal for the ith objective
|
||||
if ( fabs(_objectiveVector1[i] - _objectiveVector2[i]) > ObjectiveVector::Traits::tolerance() )
|
||||
{
|
||||
// if the ith objective have to be minimized...
|
||||
if (ObjectiveVector::minimizing(i))
|
||||
{
|
||||
if (_objectiveVector1[i] > _objectiveVector2[i])
|
||||
{
|
||||
dom = true; //_objectiveVector1[i] is not better than _objectiveVector2[i]
|
||||
}
|
||||
else
|
||||
{
|
||||
return false; //_objectiveVector2 cannot dominate _objectiveVector1
|
||||
}
|
||||
}
|
||||
// if the ith objective have to be maximized...
|
||||
else if (ObjectiveVector::maximizing(i))
|
||||
{
|
||||
if (_objectiveVector1[i] < _objectiveVector2[i])
|
||||
{
|
||||
dom = true; //_objectiveVector1[i] is not better than _objectiveVector2[i]
|
||||
}
|
||||
else
|
||||
{
|
||||
return false; //_objectiveVector2 cannot dominate _objectiveVector1
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
return dom;
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOPARETOOBJECTIVEVECTORCOMPARATOR_H_*/
|
||||
59
trunk/moeo/src/comparator/moeoPtrComparator.h
Normal file
59
trunk/moeo/src/comparator/moeoPtrComparator.h
Normal file
|
|
@ -0,0 +1,59 @@
|
|||
/***************************************************************************
|
||||
* Copyright (C) 2008 by Waldo Cancino *
|
||||
* wcancino@icmc.usp.br *
|
||||
* *
|
||||
* This program is free software; you can redistribute it and/or modify *
|
||||
* it under the terms of the GNU General Public License as published by *
|
||||
* the Free Software Foundation; either version 2 of the License, or *
|
||||
* (at your option) any later version. *
|
||||
* *
|
||||
* This program is distributed in the hope that it will be useful, *
|
||||
* but WITHOUT ANY WARRANTY; without even the implied warranty of *
|
||||
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the *
|
||||
* GNU General Public License for more details. *
|
||||
* *
|
||||
* You should have received a copy of the GNU General Public License *
|
||||
* along with this program; if not, write to the *
|
||||
* Free Software Foundation, Inc., *
|
||||
* 59 Temple Place - Suite 330, Boston, MA 02111-1307, USA. *
|
||||
***************************************************************************/
|
||||
|
||||
#ifndef MOEOPTRCOMPARATOR_H_
|
||||
#define MOEOPTRCOMPARATOR_H_
|
||||
|
||||
#include <comparator/moeoComparator.h>
|
||||
/**
|
||||
* Functor allowing to compare two solutions.referenced by pointers.
|
||||
* Several MOEO related stuff have to sort populations according some criterion
|
||||
* Instead to do this, we used a vector whose elements are pointers to true individuals
|
||||
*/
|
||||
|
||||
template < class MOEOT >
|
||||
class moeoPtrComparator : public eoBF < const MOEOT *, const MOEOT *, const bool >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Ctor with a comparator
|
||||
* @param _cmp comparator to be employed
|
||||
|
||||
*/
|
||||
moeoPtrComparator( moeoComparator<MOEOT> & _cmp) : cmp(_cmp) {}
|
||||
|
||||
/** compare two const individuals */
|
||||
const bool operator() (const MOEOT *ptr1, const MOEOT *ptr2)
|
||||
{
|
||||
return cmp(*ptr1, *ptr2);
|
||||
}
|
||||
|
||||
/** compare two non const individuals */
|
||||
const bool operator() (MOEOT *ptr1, MOEOT *ptr2)
|
||||
{
|
||||
return cmp(*ptr1, *ptr2);
|
||||
}
|
||||
|
||||
private:
|
||||
moeoComparator<MOEOT> &cmp;
|
||||
};
|
||||
|
||||
#endif /*MOEOPTRCOMPARATOR_H_*/
|
||||
|
|
@ -0,0 +1,85 @@
|
|||
/*
|
||||
* <moeoStrictObjectiveVectorComparator.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOSTRICTOBJECTIVEVECTORCOMPARATOR_H_
|
||||
#define MOEOSTRICTOBJECTIVEVECTORCOMPARATOR_H_
|
||||
|
||||
#include <comparator/moeoObjectiveVectorComparator.h>
|
||||
|
||||
/**
|
||||
* This functor class allows to compare 2 objective vectors according to strict dominance.
|
||||
*/
|
||||
template < class ObjectiveVector >
|
||||
class moeoStrictObjectiveVectorComparator : public moeoObjectiveVectorComparator < ObjectiveVector >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Returns true if _objectiveVector1 is strictly dominated by _objectiveVector2
|
||||
* @param _objectiveVector1 the first objective vector
|
||||
* @param _objectiveVector2 the second objective vector
|
||||
*/
|
||||
const bool operator()(const ObjectiveVector & _objectiveVector1, const ObjectiveVector & _objectiveVector2)
|
||||
{
|
||||
for (unsigned int i=0; i<ObjectiveVector::nObjectives(); i++)
|
||||
{
|
||||
// _objectiveVector1[i] == _objectiveVector2[i] ?
|
||||
if ( fabs(_objectiveVector1[i] - _objectiveVector2[i]) < ObjectiveVector::Traits::tolerance() )
|
||||
{
|
||||
return false; // _objectiveVector1[i] is not STRICTLY better than _objectiveVector2[i]
|
||||
}
|
||||
else if (ObjectiveVector::minimizing(i))
|
||||
{
|
||||
if (_objectiveVector1[i] < _objectiveVector2[i])
|
||||
{
|
||||
return false; // _objectiveVector1[i] is not better than _objectiveVector2[i]
|
||||
}
|
||||
}
|
||||
else if (ObjectiveVector::maximizing(i))
|
||||
{
|
||||
if (_objectiveVector1[i] > _objectiveVector2[i])
|
||||
{
|
||||
return false; // _objectiveVector1[i] is not better than _objectiveVector2[i]
|
||||
}
|
||||
}
|
||||
}
|
||||
return true;
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOSTRICTOBJECTIVEVECTORCOMPARATOR_H_*/
|
||||
|
|
@ -0,0 +1,84 @@
|
|||
/*
|
||||
* <moeoWeakObjectiveVectorComparator.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOWEAKOBJECTIVEVECTORCOMPARATOR_H_
|
||||
#define MOEOWEAKOBJECTIVEVECTORCOMPARATOR_H_
|
||||
|
||||
#include <comparator/moeoObjectiveVectorComparator.h>
|
||||
|
||||
/**
|
||||
* This functor class allows to compare 2 objective vectors according to weak dominance.
|
||||
*/
|
||||
template < class ObjectiveVector >
|
||||
class moeoWeakObjectiveVectorComparator : public moeoObjectiveVectorComparator < ObjectiveVector >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Returns true if _objectiveVector1 is weakly dominated by _objectiveVector2
|
||||
* @param _objectiveVector1 the first objective vector
|
||||
* @param _objectiveVector2 the second objective vector
|
||||
*/
|
||||
const bool operator()(const ObjectiveVector & _objectiveVector1, const ObjectiveVector & _objectiveVector2)
|
||||
{
|
||||
for (unsigned int i=0; i<ObjectiveVector::nObjectives(); i++)
|
||||
{
|
||||
// _objectiveVector1[i] == _objectiveVector2[i] ?
|
||||
if ( fabs(_objectiveVector1[i] - _objectiveVector2[i]) > ObjectiveVector::Traits::tolerance() )
|
||||
{
|
||||
if (ObjectiveVector::minimizing(i))
|
||||
{
|
||||
if (_objectiveVector1[i] < _objectiveVector2[i])
|
||||
{
|
||||
return false; // _objectiveVector1[i] is not better than _objectiveVector2[i]
|
||||
}
|
||||
}
|
||||
else if (ObjectiveVector::maximizing(i))
|
||||
{
|
||||
if (_objectiveVector1[i] > _objectiveVector2[i])
|
||||
{
|
||||
return false; // _objectiveVector1[i] is not better than _objectiveVector2[i]
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
return true;
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOWEAKOBJECTIVEVECTORCOMPARATOR_H_*/
|
||||
396
trunk/moeo/src/core/MOEO.h
Normal file
396
trunk/moeo/src/core/MOEO.h
Normal file
|
|
@ -0,0 +1,396 @@
|
|||
/*
|
||||
* <MOEO.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEO_H_
|
||||
#define MOEO_H_
|
||||
|
||||
#include <iostream>
|
||||
#include <stdexcept>
|
||||
#include <string>
|
||||
#include <EO.h>
|
||||
|
||||
/**
|
||||
* Base class allowing to represent a solution (an individual) for multi-objective optimization.
|
||||
* The template argument MOEOObjectiveVector allows to represent the solution in the objective space (it can be a moeoObjectiveVector object).
|
||||
* The template argument MOEOFitness is an object reflecting the quality of the solution in term of convergence (the fitness of a solution is always to be maximized).
|
||||
* The template argument MOEODiversity is an object reflecting the quality of the solution in term of diversity (the diversity of a solution is always to be maximized).
|
||||
* All template arguments must have a void and a copy constructor.
|
||||
* Using some specific representations, you will have to define a copy constructor if the default one is not what you want.
|
||||
* In the same cases, you will also have to define the affectation operator (operator=).
|
||||
* Then, you will explicitly have to call the parent copy constructor and the parent affectation operator at the beginning of the corresponding implementation.
|
||||
* Besides, note that, contrary to the mono-objective case (and to EO) where the fitness value of a solution is confused with its objective value,
|
||||
* the fitness value differs of the objectives values in the multi-objective case.
|
||||
*/
|
||||
|
||||
/*
|
||||
template < typename DataType, typename DataTypeEx > struct Wrapper {
|
||||
|
||||
Wrapper() {}
|
||||
|
||||
Wrapper( const DataType& data )
|
||||
: embededData( data ) {}
|
||||
|
||||
Wrapper( const Wrapper& wrapper )
|
||||
: embededData( wrapper.embededData ), embededDataEx( wrapper.embededDataEx ) {}
|
||||
|
||||
operator const DataType& () const { return embededData; }
|
||||
|
||||
Wrapper& operator= ( const Wrapper& wrapper ) {
|
||||
|
||||
embededData = wrapper.embededData;
|
||||
embededDataEx = wrapper.embededDataEx;
|
||||
return *this;
|
||||
}
|
||||
|
||||
Wrapper& operator= ( const DataType& data ) {
|
||||
|
||||
embededData = data;
|
||||
return *this;
|
||||
}
|
||||
|
||||
DataType embededData;
|
||||
DataTypeEx embededDataEx;
|
||||
};
|
||||
**/
|
||||
|
||||
|
||||
template < class MOEOObjectiveVector, class MOEOFitness=double, class MOEODiversity=double >
|
||||
class MOEO : public EO < MOEOObjectiveVector >
|
||||
{
|
||||
public:
|
||||
|
||||
/** the objective vector type of a solution */
|
||||
typedef MOEOObjectiveVector ObjectiveVector;
|
||||
|
||||
/** the fitness type of a solution */
|
||||
typedef MOEOFitness Fitness;
|
||||
// typedef Wrapper< MOEOFitness, MOEOObjectiveVector > Fitness;
|
||||
|
||||
/** the diversity type of a solution */
|
||||
typedef MOEODiversity Diversity;
|
||||
|
||||
|
||||
/**
|
||||
* Ctor
|
||||
*/
|
||||
MOEO()
|
||||
{
|
||||
// default values for every parameters
|
||||
objectiveVectorValue = ObjectiveVector();
|
||||
fitnessValue = Fitness();
|
||||
diversityValue = Diversity();
|
||||
// invalidate all
|
||||
invalidate();
|
||||
flagValue=0;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Virtual dtor
|
||||
*/
|
||||
virtual ~MOEO()
|
||||
{};
|
||||
|
||||
|
||||
/**
|
||||
* Returns the objective vector of the current solution
|
||||
*/
|
||||
ObjectiveVector objectiveVector() const
|
||||
{
|
||||
if ( invalidObjectiveVector() )
|
||||
{
|
||||
throw std::runtime_error("invalid objective vector in MOEO");
|
||||
}
|
||||
return objectiveVectorValue;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Sets one dimension of the objective vector
|
||||
* @param _dim dimension of the objective vector to set
|
||||
* @param _value the new value of the corresponding objective
|
||||
*/
|
||||
void objectiveVector(unsigned int _dim, typename ObjectiveVector::Type _value)
|
||||
{
|
||||
objectiveVectorValue[_dim] = _value;
|
||||
invalidObjectiveVectorValue = false;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Gets one dimension of the objective vector
|
||||
* @param _dim dimension of the objective vector to set
|
||||
*/
|
||||
typename ObjectiveVector::Type objectiveVector(unsigned int _dim)
|
||||
{
|
||||
return objectiveVectorValue[_dim];
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the objective vector of the current solution
|
||||
* @param _objectiveVectorValue the new objective vector
|
||||
*/
|
||||
void objectiveVector(const ObjectiveVector & _objectiveVectorValue)
|
||||
{
|
||||
objectiveVectorValue = _objectiveVectorValue;
|
||||
invalidObjectiveVectorValue = false;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the objective vector as invalid
|
||||
*/
|
||||
void invalidateObjectiveVector()
|
||||
{
|
||||
invalidObjectiveVectorValue = true;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the objective vector is invalid, false otherwise
|
||||
*/
|
||||
bool invalidObjectiveVector() const
|
||||
{
|
||||
return invalidObjectiveVectorValue;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns the fitness value of the current solution
|
||||
*/
|
||||
Fitness fitness() const
|
||||
{
|
||||
if ( invalidFitness() )
|
||||
{
|
||||
throw std::runtime_error("invalid fitness in MOEO");
|
||||
}
|
||||
// const_cast< Fitness& >( fitnessValue ).embededDataEx = objectiveVectorValue;
|
||||
|
||||
return fitnessValue;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the fitness value of the current solution
|
||||
* @param _fitnessValue the new fitness value
|
||||
*/
|
||||
void fitness(const Fitness & _fitnessValue)
|
||||
{
|
||||
fitnessValue = _fitnessValue;
|
||||
invalidFitnessValue = false;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the fitness value as invalid
|
||||
*/
|
||||
void invalidateFitness()
|
||||
{
|
||||
invalidFitnessValue = true;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the fitness value is invalid, false otherwise
|
||||
*/
|
||||
bool invalidFitness() const
|
||||
{
|
||||
return invalidFitnessValue;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns the diversity value of the current solution
|
||||
*/
|
||||
Diversity diversity() const
|
||||
{
|
||||
if ( invalidDiversity() )
|
||||
{
|
||||
throw std::runtime_error("invalid diversity in MOEO");
|
||||
}
|
||||
return diversityValue;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the diversity value of the current solution
|
||||
* @param _diversityValue the new diversity value
|
||||
*/
|
||||
void diversity(const Diversity & _diversityValue)
|
||||
{
|
||||
diversityValue = _diversityValue;
|
||||
invalidDiversityValue = false;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the diversity value as invalid
|
||||
*/
|
||||
void invalidateDiversity()
|
||||
{
|
||||
invalidDiversityValue = true;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the diversity value is invalid, false otherwise
|
||||
*/
|
||||
bool invalidDiversity() const
|
||||
{
|
||||
return invalidDiversityValue;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the objective vector, the fitness value and the diversity value as invalid
|
||||
*/
|
||||
void invalidate()
|
||||
{
|
||||
invalidateObjectiveVector();
|
||||
invalidateFitness();
|
||||
invalidateDiversity();
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the objective values are invalid, false otherwise
|
||||
*/
|
||||
bool invalid() const
|
||||
{
|
||||
return invalidObjectiveVector();
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the objective vector of the current solution is smaller than the objective vector of _other on the first objective,
|
||||
* then on the second, and so on (can be usefull for sorting/printing).
|
||||
* You should implement another function in the sub-class of MOEO to have another sorting mecanism.
|
||||
* @param _other the other MOEO object to compare with
|
||||
*/
|
||||
bool operator<(const MOEO & _other) const
|
||||
{
|
||||
return objectiveVector() < _other.objectiveVector();
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Return the class id (the class name as a std::string)
|
||||
*/
|
||||
virtual std::string className() const
|
||||
{
|
||||
return "MOEO";
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Writing object
|
||||
* @param _os output stream
|
||||
*/
|
||||
virtual void printOn(std::ostream & _os) const
|
||||
{
|
||||
if ( invalidObjectiveVector() )
|
||||
{
|
||||
_os << "INVALID ";
|
||||
}
|
||||
else
|
||||
{
|
||||
_os << objectiveVectorValue << ' ';
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Reading object
|
||||
* @param _is input stream
|
||||
*/
|
||||
virtual void readFrom(std::istream & _is)
|
||||
{
|
||||
std::string objectiveVector_str;
|
||||
int pos = _is.tellg();
|
||||
_is >> objectiveVector_str;
|
||||
if (objectiveVector_str == "INVALID")
|
||||
{
|
||||
invalidateObjectiveVector();
|
||||
}
|
||||
else
|
||||
{
|
||||
invalidObjectiveVectorValue = false;
|
||||
_is.seekg(pos); // rewind
|
||||
_is >> objectiveVectorValue;
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Setter for "flag"
|
||||
* @param _flag the flag value
|
||||
*/
|
||||
void flag(int _flag){
|
||||
flagValue=_flag;
|
||||
}
|
||||
|
||||
/**
|
||||
* Getter for "flag"
|
||||
* @return the flag value
|
||||
*/
|
||||
int flag() const{
|
||||
return flagValue;
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/** the objective vector of this solution */
|
||||
ObjectiveVector objectiveVectorValue;
|
||||
/** true if the objective vector is invalid */
|
||||
bool invalidObjectiveVectorValue;
|
||||
/** the fitness value of this solution */
|
||||
Fitness fitnessValue;
|
||||
/** true if the fitness value is invalid */
|
||||
bool invalidFitnessValue;
|
||||
/** the diversity value of this solution */
|
||||
Diversity diversityValue;
|
||||
/** true if the diversity value is invalid */
|
||||
bool invalidDiversityValue;
|
||||
/** A flag which can be used to stock information*/
|
||||
int flagValue;
|
||||
|
||||
};
|
||||
|
||||
|
||||
|
||||
#endif /*MOEO_H_*/
|
||||
108
trunk/moeo/src/core/moeoBitVector.h
Normal file
108
trunk/moeo/src/core/moeoBitVector.h
Normal file
|
|
@ -0,0 +1,108 @@
|
|||
/*
|
||||
* <moeoBitVector.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOBITVECTOR_H_
|
||||
#define MOEOBITVECTOR_H_
|
||||
|
||||
#include <core/moeoVector.h>
|
||||
|
||||
/**
|
||||
* This class is an implementationeo of a simple bit-valued moeoVector.
|
||||
*/
|
||||
template < class MOEOObjectiveVector, class MOEOFitness=double, class MOEODiversity=double >
|
||||
class moeoBitVector : public moeoVector < MOEOObjectiveVector, bool, MOEOFitness, MOEODiversity >
|
||||
{
|
||||
public:
|
||||
|
||||
using moeoVector < MOEOObjectiveVector, bool, MOEOFitness, MOEODiversity > :: begin;
|
||||
using moeoVector < MOEOObjectiveVector, bool, MOEOFitness, MOEODiversity > :: end;
|
||||
using moeoVector < MOEOObjectiveVector, bool, MOEOFitness, MOEODiversity > :: resize;
|
||||
using moeoVector < MOEOObjectiveVector, bool, MOEOFitness, MOEODiversity > :: size;
|
||||
|
||||
|
||||
/**
|
||||
* Ctor
|
||||
* @param _size Length of vector (default is 0)
|
||||
* @param _value Initial value of all elements (default is default value of type GeneType)
|
||||
*/
|
||||
moeoBitVector(unsigned int _size = 0, bool _value = false) : moeoVector< MOEOObjectiveVector, bool, MOEOFitness, MOEODiversity >(_size, _value)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Returns the class name as a std::string
|
||||
*/
|
||||
virtual std::string className() const
|
||||
{
|
||||
return "moeoBitVector";
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Writing object
|
||||
* @param _os output stream
|
||||
*/
|
||||
virtual void printOn(std::ostream & _os) const
|
||||
{
|
||||
MOEO < MOEOObjectiveVector, MOEOFitness, MOEODiversity >::printOn(_os);
|
||||
_os << ' ';
|
||||
_os << size() << ' ';
|
||||
std::copy(begin(), end(), std::ostream_iterator<bool>(_os));
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Reading object
|
||||
* @param _is input stream
|
||||
*/
|
||||
virtual void readFrom(std::istream & _is)
|
||||
{
|
||||
MOEO < MOEOObjectiveVector, MOEOFitness, MOEODiversity >::readFrom(_is);
|
||||
unsigned int s;
|
||||
_is >> s;
|
||||
std::string bits;
|
||||
_is >> bits;
|
||||
if (_is)
|
||||
{
|
||||
resize(bits.size());
|
||||
std::transform(bits.begin(), bits.end(), begin(), std::bind2nd(std::equal_to<char>(), '1'));
|
||||
}
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOBITVECTOR_H_*/
|
||||
50
trunk/moeo/src/core/moeoEvalFunc.h
Normal file
50
trunk/moeo/src/core/moeoEvalFunc.h
Normal file
|
|
@ -0,0 +1,50 @@
|
|||
/*
|
||||
* <moeoEvalFunc.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOEVALFUNC_H_
|
||||
#define MOEOEVALFUNC_H_
|
||||
|
||||
#include <eoEvalFunc.h>
|
||||
|
||||
/*
|
||||
* Functor that evaluates one MOEO by setting all its objective values.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoEvalFunc : public eoEvalFunc< MOEOT >
|
||||
{};
|
||||
|
||||
#endif /*MOEOEVALFUNC_H_*/
|
||||
71
trunk/moeo/src/core/moeoIntVector.h
Normal file
71
trunk/moeo/src/core/moeoIntVector.h
Normal file
|
|
@ -0,0 +1,71 @@
|
|||
/*
|
||||
* <moeoIntVector.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOINTVECTOR_H_
|
||||
#define MOEOINTVECTOR_H_
|
||||
|
||||
#include <core/moeoVector.h>
|
||||
|
||||
/**
|
||||
* This class is an implementation of a simple double-valued moeoVector.
|
||||
*/
|
||||
template < class MOEOObjectiveVector, class MOEOFitness=double, class MOEODiversity=double >
|
||||
class moeoIntVector : public moeoVector < MOEOObjectiveVector, int, MOEOFitness, MOEODiversity >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Ctor
|
||||
* @param _size Length of vector (default is 0)
|
||||
* @param _value Initial value of all elements (default is default value of type GeneType)
|
||||
*/
|
||||
moeoIntVector(unsigned int _size = 0, int _value = 0) : moeoVector< MOEOObjectiveVector, int, MOEOFitness, MOEODiversity >(_size, _value)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Returns the class name as a std::string
|
||||
*/
|
||||
virtual std::string className() const
|
||||
{
|
||||
return "moeoIntVector";
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOINTVECTOR_H_*/
|
||||
116
trunk/moeo/src/core/moeoObjectiveVector.h
Normal file
116
trunk/moeo/src/core/moeoObjectiveVector.h
Normal file
|
|
@ -0,0 +1,116 @@
|
|||
/*
|
||||
* <moeoObjectiveVector.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOOBJECTIVEVECTOR_H_
|
||||
#define MOEOOBJECTIVEVECTOR_H_
|
||||
|
||||
#include <vector>
|
||||
|
||||
/**
|
||||
* Abstract class allowing to represent a solution in the objective space (phenotypic representation).
|
||||
* The template argument ObjectiveVectorTraits defaults to moeoObjectiveVectorTraits,
|
||||
* but it can be replaced at will by any other class that implements the static functions defined therein.
|
||||
* Some static funtions to access to the traits characteristics are re-defined in order not to write a lot of typedef's.
|
||||
*/
|
||||
template < class ObjectiveVectorTraits, class ObjectiveVectorType >
|
||||
class moeoObjectiveVector : public std::vector < ObjectiveVectorType >
|
||||
{
|
||||
public:
|
||||
|
||||
/** The traits of objective vectors */
|
||||
typedef ObjectiveVectorTraits Traits;
|
||||
/** The type of an objective value */
|
||||
typedef ObjectiveVectorType Type;
|
||||
|
||||
|
||||
/**
|
||||
* Ctor
|
||||
*/
|
||||
moeoObjectiveVector(Type _value = Type()) : std::vector < Type > (ObjectiveVectorTraits::nObjectives(), _value)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor from a vector of Type
|
||||
* @param _v the std::vector < Type >
|
||||
*/
|
||||
moeoObjectiveVector(std::vector < Type > & _v) : std::vector < Type > (_v)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Parameters setting (for the objective vector of any solution)
|
||||
* @param _nObjectives the number of objectives
|
||||
* @param _bObjectives the min/max vector (true = min / false = max)
|
||||
*/
|
||||
static void setup(unsigned int _nObjectives, std::vector < bool > & _bObjectives)
|
||||
{
|
||||
ObjectiveVectorTraits::setup(_nObjectives, _bObjectives);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns the number of objectives
|
||||
*/
|
||||
static unsigned int nObjectives()
|
||||
{
|
||||
return ObjectiveVectorTraits::nObjectives();
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the _ith objective have to be minimized
|
||||
* @param _i the index
|
||||
*/
|
||||
static bool minimizing(unsigned int _i)
|
||||
{
|
||||
return ObjectiveVectorTraits::minimizing(_i);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the _ith objective have to be maximized
|
||||
* @param _i the index
|
||||
*/
|
||||
static bool maximizing(unsigned int _i)
|
||||
{
|
||||
return ObjectiveVectorTraits::maximizing(_i);
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOOBJECTIVEVECTOR_H_*/
|
||||
42
trunk/moeo/src/core/moeoObjectiveVectorTraits.cpp
Normal file
42
trunk/moeo/src/core/moeoObjectiveVectorTraits.cpp
Normal file
|
|
@ -0,0 +1,42 @@
|
|||
/*
|
||||
* <moeoObjectiveVectorTraits.cpp>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#include <core/moeoObjectiveVectorTraits.h>
|
||||
|
||||
// The static variables of the moeoObjectiveVectorTraits class need to be allocated
|
||||
unsigned int moeoObjectiveVectorTraits::nObj;
|
||||
std::vector < bool > moeoObjectiveVectorTraits::bObj;
|
||||
130
trunk/moeo/src/core/moeoObjectiveVectorTraits.h
Normal file
130
trunk/moeo/src/core/moeoObjectiveVectorTraits.h
Normal file
|
|
@ -0,0 +1,130 @@
|
|||
/*
|
||||
* <moeoObjectiveVectorTraits.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOOBJECTIVEVECTORTRAITS_H_
|
||||
#define MOEOOBJECTIVEVECTORTRAITS_H_
|
||||
|
||||
#include <iostream>
|
||||
#include <stdexcept>
|
||||
#include <vector>
|
||||
|
||||
/**
|
||||
* A traits class for moeoObjectiveVector to specify the number of objectives and which ones have to be minimized or maximized.
|
||||
*/
|
||||
class moeoObjectiveVectorTraits
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Parameters setting
|
||||
* @param _nObjectives the number of objectives
|
||||
* @param _bObjectives the min/max vector (true = min / false = max)
|
||||
*/
|
||||
static void setup(unsigned int _nObjectives, std::vector < bool > & _bObjectives)
|
||||
{
|
||||
// in case the number of objectives was already set to a different value
|
||||
if ( nObj && (nObj != _nObjectives) )
|
||||
{
|
||||
std::cout << "WARNING\n";
|
||||
std::cout << "WARNING : the number of objectives are changing\n";
|
||||
std::cout << "WARNING : Make sure all existing objects are destroyed\n";
|
||||
std::cout << "WARNING\n";
|
||||
}
|
||||
// number of objectives
|
||||
nObj = _nObjectives;
|
||||
// min/max vector
|
||||
bObj = _bObjectives;
|
||||
// in case the number of objectives and the min/max vector size don't match
|
||||
if (nObj != bObj.size())
|
||||
throw std::runtime_error("Number of objectives and min/max size don't match in moeoObjectiveVectorTraits::setup");
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns the number of objectives
|
||||
*/
|
||||
static unsigned int nObjectives()
|
||||
{
|
||||
// in case the number of objectives would not be assigned yet
|
||||
if (! nObj)
|
||||
throw std::runtime_error("Number of objectives not assigned in moeoObjectiveVectorTraits");
|
||||
return nObj;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the _ith objective have to be minimized
|
||||
* @param _i the index
|
||||
*/
|
||||
static bool minimizing(unsigned int _i)
|
||||
{
|
||||
// in case there would be a wrong index
|
||||
if (_i >= bObj.size())
|
||||
throw std::runtime_error("Wrong index in moeoObjectiveVectorTraits");
|
||||
return bObj[_i];
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the _ith objective have to be maximized
|
||||
* @param _i the index
|
||||
*/
|
||||
static bool maximizing(unsigned int _i)
|
||||
{
|
||||
return (! minimizing(_i));
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns the tolerance value (to compare solutions)
|
||||
*/
|
||||
static double tolerance()
|
||||
{
|
||||
return 1e-10;
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/** The number of objectives */
|
||||
static unsigned int nObj;
|
||||
/** The min/max vector */
|
||||
static std::vector < bool > bObj;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOOBJECTIVEVECTORTRAITS_H_*/
|
||||
190
trunk/moeo/src/core/moeoRealObjectiveVector.h
Normal file
190
trunk/moeo/src/core/moeoRealObjectiveVector.h
Normal file
|
|
@ -0,0 +1,190 @@
|
|||
/*
|
||||
* <moeoRealObjectiveVector.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOREALOBJECTIVEVECTOR_H_
|
||||
#define MOEOREALOBJECTIVEVECTOR_H_
|
||||
|
||||
#include <iostream>
|
||||
#include <math.h>
|
||||
#include <comparator/moeoObjectiveObjectiveVectorComparator.h>
|
||||
#include <comparator/moeoParetoObjectiveVectorComparator.h>
|
||||
#include <core/moeoObjectiveVector.h>
|
||||
|
||||
/**
|
||||
* This class allows to represent a solution in the objective space (phenotypic representation) by a std::vector of real values,
|
||||
* i.e. that an objective value is represented using a double, and this for any objective.
|
||||
*/
|
||||
template < class ObjectiveVectorTraits >
|
||||
class moeoRealObjectiveVector : public moeoObjectiveVector < ObjectiveVectorTraits, double >
|
||||
{
|
||||
public:
|
||||
|
||||
using moeoObjectiveVector < ObjectiveVectorTraits, double >::size;
|
||||
using moeoObjectiveVector < ObjectiveVectorTraits, double >::operator[];
|
||||
|
||||
/**
|
||||
* Ctor
|
||||
*/
|
||||
moeoRealObjectiveVector(double _value = 0.0) : moeoObjectiveVector < ObjectiveVectorTraits, double > (_value)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor from a vector of doubles
|
||||
* @param _v the std::vector < double >
|
||||
*/
|
||||
moeoRealObjectiveVector(std::vector < double > & _v) : moeoObjectiveVector < ObjectiveVectorTraits, double > (_v)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the current objective vector dominates _other according to the Pareto dominance relation
|
||||
* (but it's better to use a moeoObjectiveVectorComparator object to compare solutions)
|
||||
* @param _other the other moeoRealObjectiveVector object to compare with
|
||||
*/
|
||||
bool dominates(const moeoRealObjectiveVector < ObjectiveVectorTraits > & _other) const
|
||||
{
|
||||
moeoParetoObjectiveVectorComparator < moeoRealObjectiveVector<ObjectiveVectorTraits> > comparator;
|
||||
return comparator(_other, *this);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the current objective vector is equal to _other (according to a tolerance value)
|
||||
* @param _other the other moeoRealObjectiveVector object to compare with
|
||||
*/
|
||||
bool operator==(const moeoRealObjectiveVector < ObjectiveVectorTraits > & _other) const
|
||||
{
|
||||
for (unsigned int i=0; i < size(); i++)
|
||||
{
|
||||
if ( fabs(operator[](i) - _other[i]) > ObjectiveVectorTraits::tolerance() )
|
||||
{
|
||||
return false;
|
||||
}
|
||||
}
|
||||
return true;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the current objective vector is different than _other (according to a tolerance value)
|
||||
* @param _other the other moeoRealObjectiveVector object to compare with
|
||||
*/
|
||||
bool operator!=(const moeoRealObjectiveVector < ObjectiveVectorTraits > & _other) const
|
||||
{
|
||||
return ! operator==(_other);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the current objective vector is smaller than _other on the first objective, then on the second, and so on
|
||||
* (can be usefull for sorting/printing)
|
||||
* @param _other the other moeoRealObjectiveVector object to compare with
|
||||
*/
|
||||
bool operator<(const moeoRealObjectiveVector < ObjectiveVectorTraits > & _other) const
|
||||
{
|
||||
moeoObjectiveObjectiveVectorComparator < moeoRealObjectiveVector < ObjectiveVectorTraits > > cmp;
|
||||
return cmp(*this, _other);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the current objective vector is greater than _other on the first objective, then on the second, and so on
|
||||
* (can be usefull for sorting/printing)
|
||||
* @param _other the other moeoRealObjectiveVector object to compare with
|
||||
*/
|
||||
bool operator>(const moeoRealObjectiveVector < ObjectiveVectorTraits > & _other) const
|
||||
{
|
||||
return _other < *this;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the current objective vector is smaller than or equal to _other on the first objective, then on the second, and so on
|
||||
* (can be usefull for sorting/printing)
|
||||
* @param _other the other moeoRealObjectiveVector object to compare with
|
||||
*/
|
||||
bool operator<=(const moeoRealObjectiveVector < ObjectiveVectorTraits > & _other) const
|
||||
{
|
||||
return operator==(_other) || operator<(_other);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns true if the current objective vector is greater than or equal to _other on the first objective, then on the second, and so on
|
||||
* (can be usefull for sorting/printing)
|
||||
* @param _other the other moeoRealObjectiveVector object to compare with
|
||||
*/
|
||||
bool operator>=(const moeoRealObjectiveVector < ObjectiveVectorTraits > & _other) const
|
||||
{
|
||||
return operator==(_other) || operator>(_other);
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
|
||||
/**
|
||||
* Output for a moeoRealObjectiveVector object
|
||||
* @param _os output stream
|
||||
* @param _objectiveVector the objective vector to write
|
||||
*/
|
||||
template < class ObjectiveVectorTraits >
|
||||
std::ostream & operator<<(std::ostream & _os, const moeoRealObjectiveVector < ObjectiveVectorTraits > & _objectiveVector)
|
||||
{
|
||||
for (unsigned int i=0; i<_objectiveVector.size()-1; i++)
|
||||
_os << _objectiveVector[i] << " ";
|
||||
_os << _objectiveVector[_objectiveVector.size()-1];
|
||||
return _os;
|
||||
}
|
||||
|
||||
/**
|
||||
* Input for a moeoRealObjectiveVector object
|
||||
* @param _is input stream
|
||||
* @param _objectiveVector the objective vector to read
|
||||
*/
|
||||
template < class ObjectiveVectorTraits >
|
||||
std::istream & operator>>(std::istream & _is, moeoRealObjectiveVector < ObjectiveVectorTraits > & _objectiveVector)
|
||||
{
|
||||
_objectiveVector = moeoRealObjectiveVector < ObjectiveVectorTraits > ();
|
||||
for (unsigned int i=0; i<_objectiveVector.size(); i++)
|
||||
{
|
||||
_is >> _objectiveVector[i];
|
||||
}
|
||||
return _is;
|
||||
}
|
||||
|
||||
#endif /*MOEOREALOBJECTIVEVECTOR_H_*/
|
||||
70
trunk/moeo/src/core/moeoRealVector.h
Normal file
70
trunk/moeo/src/core/moeoRealVector.h
Normal file
|
|
@ -0,0 +1,70 @@
|
|||
/*
|
||||
* <moeoRealVector.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOREALVECTOR_H_
|
||||
#define MOEOREALVECTOR_H_
|
||||
|
||||
#include <core/moeoVector.h>
|
||||
|
||||
/**
|
||||
* This class is an implementation of a simple double-valued moeoVector.
|
||||
*/
|
||||
template < class MOEOObjectiveVector, class MOEOFitness=double, class MOEODiversity=double >
|
||||
class moeoRealVector : public moeoVector < MOEOObjectiveVector, double, MOEOFitness, MOEODiversity >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Ctor
|
||||
* @param _size Length of vector (default is 0)
|
||||
* @param _value Initial value of all elements (default is default value of type GeneType)
|
||||
*/
|
||||
moeoRealVector(unsigned int _size = 0, double _value = 0.0) : moeoVector< MOEOObjectiveVector, double, MOEOFitness, MOEODiversity >(_size, _value)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Returns the class name as a std::string
|
||||
*/
|
||||
virtual std::string className() const
|
||||
{
|
||||
return "moeoRealVector";
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOREALVECTOR_H_*/
|
||||
168
trunk/moeo/src/core/moeoVector.h
Normal file
168
trunk/moeo/src/core/moeoVector.h
Normal file
|
|
@ -0,0 +1,168 @@
|
|||
/*
|
||||
* <moeoVector.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOVECTOR_H_
|
||||
#define MOEOVECTOR_H_
|
||||
|
||||
#include <iterator>
|
||||
#include <vector>
|
||||
#include <core/MOEO.h>
|
||||
|
||||
/**
|
||||
* Base class for fixed length chromosomes, just derives from MOEO and std::vector and redirects the smaller than operator to MOEO (objective vector based comparison).
|
||||
* GeneType must have the following methods: void ctor (needed for the std::vector<>), copy ctor.
|
||||
*/
|
||||
template < class MOEOObjectiveVector, class GeneType, class MOEOFitness=double, class MOEODiversity=double >
|
||||
class moeoVector : public MOEO < MOEOObjectiveVector, MOEOFitness, MOEODiversity >, public std::vector < GeneType >
|
||||
{
|
||||
public:
|
||||
|
||||
using MOEO < MOEOObjectiveVector, MOEOFitness, MOEODiversity > :: invalidate;
|
||||
using std::vector < GeneType > :: operator[];
|
||||
using std::vector < GeneType > :: begin;
|
||||
using std::vector < GeneType > :: end;
|
||||
using std::vector < GeneType > :: resize;
|
||||
using std::vector < GeneType > :: size;
|
||||
|
||||
/** the atomic type */
|
||||
typedef GeneType AtomType;
|
||||
/** the container type */
|
||||
typedef std::vector < GeneType > ContainerType;
|
||||
|
||||
|
||||
/**
|
||||
* Default ctor.
|
||||
* @param _size Length of vector (default is 0)
|
||||
* @param _value Initial value of all elements (default is default value of type GeneType)
|
||||
*/
|
||||
moeoVector(unsigned int _size = 0, GeneType _value = GeneType()) :
|
||||
MOEO < MOEOObjectiveVector, MOEOFitness, MOEODiversity >(), std::vector<GeneType>(_size, _value)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* We can't have a Ctor from a std::vector as it would create ambiguity with the copy Ctor.
|
||||
* @param _v a vector of GeneType
|
||||
*/
|
||||
void value(const std::vector < GeneType > & _v)
|
||||
{
|
||||
if (_v.size() != size()) // safety check
|
||||
{
|
||||
if (size()) // NOT an initial empty std::vector
|
||||
{
|
||||
std::cout << "Warning: Changing size in moeoVector assignation"<<std::endl;
|
||||
resize(_v.size());
|
||||
}
|
||||
else
|
||||
{
|
||||
throw std::runtime_error("Size not initialized in moeoVector");
|
||||
}
|
||||
}
|
||||
std::copy(_v.begin(), _v.end(), begin());
|
||||
invalidate();
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* To avoid conflicts between MOEO::operator< and std::vector<GeneType>::operator<
|
||||
* @param _moeo the object to compare with
|
||||
*/
|
||||
bool operator<(const moeoVector< MOEOObjectiveVector, GeneType, MOEOFitness, MOEODiversity> & _moeo) const
|
||||
{
|
||||
return MOEO < MOEOObjectiveVector, MOEOFitness, MOEODiversity >::operator<(_moeo);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Writing object
|
||||
* @param _os output stream
|
||||
*/
|
||||
virtual void printOn(std::ostream & _os) const
|
||||
{
|
||||
MOEO < MOEOObjectiveVector, MOEOFitness, MOEODiversity >::printOn(_os);
|
||||
_os << ' ';
|
||||
_os << size() << ' ';
|
||||
std::copy(begin(), end(), std::ostream_iterator<AtomType>(_os, " "));
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Reading object
|
||||
* @param _is input stream
|
||||
*/
|
||||
virtual void readFrom(std::istream & _is)
|
||||
{
|
||||
MOEO < MOEOObjectiveVector, MOEOFitness, MOEODiversity >::readFrom(_is);
|
||||
unsigned int sz;
|
||||
_is >> sz;
|
||||
resize(sz);
|
||||
unsigned int i;
|
||||
for (i = 0; i < sz; ++i)
|
||||
{
|
||||
AtomType atom;
|
||||
_is >> atom;
|
||||
operator[](i) = atom;
|
||||
}
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
|
||||
/**
|
||||
* To avoid conflicts between MOEO::operator< and std::vector<double>::operator<
|
||||
* @param _moeo1 the first object to compare
|
||||
* @param _moeo2 the second object to compare
|
||||
*/
|
||||
template < class MOEOObjectiveVector, class MOEOFitness, class MOEODiversity, class GeneType >
|
||||
bool operator<(const moeoVector< MOEOObjectiveVector, GeneType, MOEOFitness, MOEODiversity> & _moeo1, const moeoVector< MOEOObjectiveVector, GeneType, MOEOFitness, MOEODiversity > & _moeo2)
|
||||
{
|
||||
return _moeo1.operator<(_moeo2);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* To avoid conflicts between MOEO::operator> and std::vector<double>::operator>
|
||||
* @param _moeo1 the first object to compare
|
||||
* @param _moeo2 the second object to compare
|
||||
*/
|
||||
template < class MOEOObjectiveVector, class MOEOFitness, class MOEODiversity, class GeneType >
|
||||
bool operator>(const moeoVector< MOEOObjectiveVector, GeneType, MOEOFitness, MOEODiversity> & _moeo1, const moeoVector< MOEOObjectiveVector, GeneType, MOEOFitness, MOEODiversity > & _moeo2)
|
||||
{
|
||||
return _moeo1.operator>(_moeo2);
|
||||
}
|
||||
|
||||
#endif /*MOEOVECTOR_H_*/
|
||||
79
trunk/moeo/src/distance/moeoDistance.h
Normal file
79
trunk/moeo/src/distance/moeoDistance.h
Normal file
|
|
@ -0,0 +1,79 @@
|
|||
/*
|
||||
* <moeoDistance.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEODISTANCE_H_
|
||||
#define MOEODISTANCE_H_
|
||||
|
||||
#include <eoFunctor.h>
|
||||
|
||||
/**
|
||||
* The base class for distance computation.
|
||||
*/
|
||||
template < class MOEOT , class Type >
|
||||
class moeoDistance : public eoBF < const MOEOT &, const MOEOT &, const Type >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Nothing to do
|
||||
* @param _pop the population
|
||||
*/
|
||||
virtual void setup(const eoPop < MOEOT > & _pop)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Nothing to do
|
||||
* @param _min lower bound
|
||||
* @param _max upper bound
|
||||
* @param _obj the objective index
|
||||
*/
|
||||
virtual void setup(double _min, double _max, unsigned int _obj)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Nothing to do
|
||||
* @param _realInterval the eoRealInterval object
|
||||
* @param _obj the objective index
|
||||
*/
|
||||
virtual void setup(eoRealInterval _realInterval, unsigned int _obj)
|
||||
{}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEODISTANCE_H_*/
|
||||
101
trunk/moeo/src/distance/moeoDistanceMatrix.h
Normal file
101
trunk/moeo/src/distance/moeoDistanceMatrix.h
Normal file
|
|
@ -0,0 +1,101 @@
|
|||
/*
|
||||
* <moeoDistanceMatrix.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEODISTANCEMATRIX_H_
|
||||
#define MOEODISTANCEMATRIX_H_
|
||||
|
||||
#include <vector>
|
||||
#include <eoFunctor.h>
|
||||
#include <distance/moeoDistance.h>
|
||||
|
||||
/**
|
||||
* A matrix to compute distances between every pair of individuals contained in a population.
|
||||
*/
|
||||
template < class MOEOT , class Type >
|
||||
class moeoDistanceMatrix : public eoUF < const eoPop < MOEOT > &, void > , public std::vector< std::vector < Type > >
|
||||
{
|
||||
public:
|
||||
|
||||
using std::vector< std::vector < Type > > :: size;
|
||||
using std::vector< std::vector < Type > > :: operator[];
|
||||
|
||||
|
||||
/**
|
||||
* Ctor
|
||||
* @param _size size for every dimension of the matrix
|
||||
* @param _distance the distance to use
|
||||
*/
|
||||
moeoDistanceMatrix (unsigned int _size, moeoDistance < MOEOT , Type > & _distance) : distance(_distance)
|
||||
{
|
||||
this->resize(_size);
|
||||
for (unsigned int i=0; i<_size; i++)
|
||||
{
|
||||
this->operator[](i).resize(_size);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the distance between every pair of individuals contained in the population _pop
|
||||
* @param _pop the population
|
||||
*/
|
||||
void operator()(const eoPop < MOEOT > & _pop)
|
||||
{
|
||||
// 1 - setup the bounds (if necessary)
|
||||
distance.setup(_pop);
|
||||
// 2 - compute distances
|
||||
this->operator[](0).operator[](0) = Type();
|
||||
for (unsigned int i=0; i<size(); i++)
|
||||
{
|
||||
this->operator[](i).operator[](i) = Type();
|
||||
for (unsigned int j=0; j<i; j++)
|
||||
{
|
||||
this->operator[](i).operator[](j) = distance(_pop[i], _pop[j]);
|
||||
this->operator[](j).operator[](i) = this->operator[](i).operator[](j);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/** the distance to use */
|
||||
moeoDistance < MOEOT , Type > & distance;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEODISTANCEMATRIX_H_*/
|
||||
98
trunk/moeo/src/distance/moeoEuclideanDistance.h
Normal file
98
trunk/moeo/src/distance/moeoEuclideanDistance.h
Normal file
|
|
@ -0,0 +1,98 @@
|
|||
/*
|
||||
* <moeoEuclideanDistance.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* François Legillon
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOEUCLIDEANDISTANCE_H_
|
||||
#define MOEOEUCLIDEANDISTANCE_H_
|
||||
|
||||
#include <math.h>
|
||||
#include <distance/moeoObjSpaceDistance.h>
|
||||
#include <utils/moeoObjectiveVectorNormalizer.h>
|
||||
|
||||
/**
|
||||
* A class allowing to compute an euclidian distance between two solutions in the objective space with normalized objective values (i.e. between 0 and 1).
|
||||
* A distance value then lies between 0 and sqrt(nObjectives).
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoEuclideanDistance : public moeoObjSpaceDistance < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/** the objective vector type of the solutions */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
/** the fitness type of the solutions */
|
||||
typedef typename MOEOT::Fitness Fitness;
|
||||
|
||||
/**
|
||||
ctr with a normalizer
|
||||
@param _normalizer the normalizer used for every ObjectiveVector
|
||||
*/
|
||||
moeoEuclideanDistance (moeoObjectiveVectorNormalizer<MOEOT> _normalizer):normalizer(_normalizer)
|
||||
{}
|
||||
/**
|
||||
default ctr
|
||||
*/
|
||||
moeoEuclideanDistance ():normalizer(defaultNormalizer)
|
||||
{}
|
||||
|
||||
/**
|
||||
* Returns the euclidian distance between _obj1 and _obj2 in the objective space
|
||||
* @param _obj1 the first objective vector
|
||||
* @param _obj2 the second objective vector
|
||||
*/
|
||||
const Fitness operator()(const ObjectiveVector & _obj1, const ObjectiveVector & _obj2)
|
||||
{
|
||||
Fitness result = 0.0;
|
||||
Fitness tmp1, tmp2;
|
||||
for (unsigned int i=0; i<ObjectiveVector::nObjectives(); i++)
|
||||
{
|
||||
tmp1 = normalizer(_obj1)[i];
|
||||
tmp2 = normalizer(_obj2)[i];
|
||||
result += (tmp1-tmp2) * (tmp1-tmp2);
|
||||
}
|
||||
return sqrt(result);
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
moeoObjectiveVectorNormalizer<MOEOT> defaultNormalizer;
|
||||
moeoObjectiveVectorNormalizer<MOEOT> &normalizer;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOEUCLIDEANDISTANCE_H_*/
|
||||
98
trunk/moeo/src/distance/moeoManhattanDistance.h
Normal file
98
trunk/moeo/src/distance/moeoManhattanDistance.h
Normal file
|
|
@ -0,0 +1,98 @@
|
|||
/*
|
||||
* <moeoManhattanDistance.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Francçois Legillon
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOMANHATTANDISTANCE_H_
|
||||
#define MOEOMANHATTANDISTANCE_H_
|
||||
|
||||
#include <math.h>
|
||||
#include <distance/moeoObjSpaceDistance.h>
|
||||
#include <utils/moeoObjectiveVectorNormalizer.h>
|
||||
|
||||
/**
|
||||
* A class allowing to compute the Manhattan distance between two solutions in the objective space normalized objective values (i.e. between 0 and 1).
|
||||
* A distance value then lies between 0 and nObjectives.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoManhattanDistance : public moeoObjSpaceDistance < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/** the objective vector type of the solutions */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
/** the fitness type of the solutions */
|
||||
typedef typename MOEOT::Fitness Fitness;
|
||||
|
||||
/**
|
||||
ctr with a normalizer
|
||||
@param _normalizer the normalizer used for every ObjectiveVector
|
||||
*/
|
||||
moeoManhattanDistance (moeoObjectiveVectorNormalizer<MOEOT> &_normalizer):normalizer(_normalizer)
|
||||
{}
|
||||
/**
|
||||
default ctr
|
||||
*/
|
||||
moeoManhattanDistance ():normalizer(defaultNormalizer)
|
||||
{}
|
||||
|
||||
/**
|
||||
* Returns the Manhattan distance between _obj1 and _obj2 in the objective space
|
||||
* @param _obj1 the first objective vector
|
||||
* @param _obj2 the second objective vector
|
||||
*/
|
||||
const double operator()(const ObjectiveVector & _obj1, const ObjectiveVector & _obj2)
|
||||
{
|
||||
double result = 0.0;
|
||||
double tmp1, tmp2;
|
||||
for (unsigned int i=0; i<ObjectiveVector::nObjectives(); i++)
|
||||
{
|
||||
tmp1 = normalizer(_obj1)[i];
|
||||
tmp2 = normalizer(_obj2)[i];
|
||||
result += fabs(tmp1-tmp2);
|
||||
}
|
||||
return result;
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
moeoObjectiveVectorNormalizer<MOEOT> defaultNormalizer;
|
||||
moeoObjectiveVectorNormalizer<MOEOT> &normalizer;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOMANHATTANDISTANCE_H_*/
|
||||
137
trunk/moeo/src/distance/moeoNormalizedDistance.h
Normal file
137
trunk/moeo/src/distance/moeoNormalizedDistance.h
Normal file
|
|
@ -0,0 +1,137 @@
|
|||
/*
|
||||
* <moeoNormalizedDistance.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEONORMALIZEDDISTANCE_H_
|
||||
#define MOEONORMALIZEDDISTANCE_H_
|
||||
|
||||
#include <vector>
|
||||
#include <utils/eoRealBounds.h>
|
||||
#include <distance/moeoDistance.h>
|
||||
|
||||
/**
|
||||
* The base class for double distance computation with normalized objective values (i.e. between 0 and 1).
|
||||
*/
|
||||
template < class MOEOT , class Type = double >
|
||||
class moeoNormalizedDistance : public moeoDistance < MOEOT , Type >
|
||||
{
|
||||
public:
|
||||
|
||||
/** the objective vector type of the solutions */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Default ctr
|
||||
*/
|
||||
moeoNormalizedDistance()
|
||||
{
|
||||
bounds.resize(ObjectiveVector::Traits::nObjectives());
|
||||
// initialize bounds in case someone does not want to use them
|
||||
for (unsigned int i=0; i<ObjectiveVector::Traits::nObjectives(); i++)
|
||||
{
|
||||
bounds[i] = eoRealInterval(0,1);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns a very small value that can be used to avoid extreme cases (where the min bound == the max bound)
|
||||
*/
|
||||
static double tiny()
|
||||
{
|
||||
return 1e-6;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the lower and the upper bounds for every objective using extremes values for solutions contained in the population _pop
|
||||
* @param _pop the population
|
||||
*/
|
||||
virtual void setup(const eoPop < MOEOT > & _pop)
|
||||
{
|
||||
double min, max;
|
||||
for (unsigned int i=0; i<ObjectiveVector::Traits::nObjectives(); i++)
|
||||
{
|
||||
min = _pop[0].objectiveVector()[i];
|
||||
max = _pop[0].objectiveVector()[i];
|
||||
for (unsigned int j=1; j<_pop.size(); j++)
|
||||
{
|
||||
min = std::min(min, _pop[j].objectiveVector()[i]);
|
||||
max = std::max(max, _pop[j].objectiveVector()[i]);
|
||||
}
|
||||
// setting of the bounds for the objective i
|
||||
setup(min, max, i);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the lower bound (_min) and the upper bound (_max) for the objective _obj
|
||||
* @param _min lower bound
|
||||
* @param _max upper bound
|
||||
* @param _obj the objective index
|
||||
*/
|
||||
virtual void setup(double _min, double _max, unsigned int _obj)
|
||||
{
|
||||
if (_min == _max)
|
||||
{
|
||||
_min -= tiny();
|
||||
_max += tiny();
|
||||
}
|
||||
bounds[_obj] = eoRealInterval(_min, _max);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the lower bound and the upper bound for the objective _obj using a eoRealInterval object
|
||||
* @param _realInterval the eoRealInterval object
|
||||
* @param _obj the objective index
|
||||
*/
|
||||
virtual void setup(eoRealInterval _realInterval, unsigned int _obj)
|
||||
{
|
||||
bounds[_obj] = _realInterval;
|
||||
}
|
||||
|
||||
|
||||
protected:
|
||||
|
||||
/** the bounds for every objective (bounds[i] = bounds for the objective i) */
|
||||
std::vector < eoRealInterval > bounds;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEONORMALIZEDDISTANCE_H_*/
|
||||
63
trunk/moeo/src/distance/moeoObjSpaceDistance.h
Normal file
63
trunk/moeo/src/distance/moeoObjSpaceDistance.h
Normal file
|
|
@ -0,0 +1,63 @@
|
|||
/*
|
||||
* <moeoObjSpaceDistance.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Jeremie Humeau
|
||||
* Arnaud Liefooghe
|
||||
* François Legillon
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
#ifndef MOEOOBJDIST_H_
|
||||
#define MOEOOBJDIST_H_
|
||||
|
||||
|
||||
#include <eo>
|
||||
#include <moeo>
|
||||
#include <cmath>
|
||||
|
||||
/**
|
||||
Distances using Objective vectors to evaluate
|
||||
*/
|
||||
template < class MOEOT>
|
||||
class moeoObjSpaceDistance : public moeoDistance < MOEOT, typename MOEOT::Fitness >, public eoBF<const typename MOEOT::ObjectiveVector&,const typename MOEOT::ObjectiveVector&,const typename MOEOT::Fitness>
|
||||
{
|
||||
public:
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
typedef typename MOEOT::Fitness Fitness;
|
||||
|
||||
virtual const Fitness operator()(const MOEOT &_moeot1,const MOEOT &_moeot2){
|
||||
return operator()(_moeot1.objectiveVector(),_moeot2.objectiveVector());
|
||||
}
|
||||
|
||||
virtual const Fitness operator()(const ObjectiveVector &_obj1, const ObjectiveVector &_obj2)=0;
|
||||
};
|
||||
#endif
|
||||
147
trunk/moeo/src/diversity/moeoCrowdingDiversityAssignment.h
Normal file
147
trunk/moeo/src/diversity/moeoCrowdingDiversityAssignment.h
Normal file
|
|
@ -0,0 +1,147 @@
|
|||
/*
|
||||
* <moeoCrowdingDiversityAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOCROWDINGDIVERSITYASSIGNMENT_H_
|
||||
#define MOEOCROWDINGDIVERSITYASSIGNMENT_H_
|
||||
|
||||
#include <eoPop.h>
|
||||
#include <comparator/moeoOneObjectiveComparator.h>
|
||||
#include <diversity/moeoDiversityAssignment.h>
|
||||
|
||||
/**
|
||||
* Diversity assignment sheme based on crowding proposed in:
|
||||
* K. Deb, A. Pratap, S. Agarwal, T. Meyarivan, "A Fast and Elitist Multi-Objective Genetic Algorithm: NSGA-II", IEEE Transactions on Evolutionary Computation, vol. 6, no. 2 (2002).
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoCrowdingDiversityAssignment : public moeoDiversityAssignment < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/** the objective vector type of the solutions */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Returns a big value (regarded as infinite)
|
||||
*/
|
||||
double inf() const
|
||||
{
|
||||
return std::numeric_limits<double>::max();
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns a very small value that can be used to avoid extreme cases (where the min bound == the max bound)
|
||||
*/
|
||||
double tiny() const
|
||||
{
|
||||
return 1e-6;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Computes diversity values for every solution contained in the population _pop
|
||||
* @param _pop the population
|
||||
*/
|
||||
void operator()(eoPop < MOEOT > & _pop)
|
||||
{
|
||||
if (_pop.size() <= 2)
|
||||
{
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
_pop[i].diversity(inf());
|
||||
}
|
||||
}
|
||||
else
|
||||
{
|
||||
setDistances(_pop);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* @warning NOT IMPLEMENTED, DO NOTHING !
|
||||
* Updates the diversity values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
* @warning NOT IMPLEMENTED, DO NOTHING !
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec)
|
||||
{
|
||||
std::cout << "WARNING : updateByDeleting not implemented in moeoCrowdingDiversityAssignment" << std::endl;
|
||||
}
|
||||
|
||||
|
||||
protected:
|
||||
|
||||
/**
|
||||
* Sets the distance values
|
||||
* @param _pop the population
|
||||
*/
|
||||
virtual void setDistances (eoPop < MOEOT > & _pop)
|
||||
{
|
||||
double min, max, distance;
|
||||
unsigned int nObjectives = MOEOT::ObjectiveVector::nObjectives();
|
||||
// set diversity to 0
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
_pop[i].diversity(0.0);
|
||||
}
|
||||
// for each objective
|
||||
for (unsigned int obj=0; obj<nObjectives; obj++)
|
||||
{
|
||||
// comparator
|
||||
moeoOneObjectiveComparator < MOEOT > objComp(obj);
|
||||
// sort
|
||||
std::sort(_pop.begin(), _pop.end(), objComp);
|
||||
// min & max
|
||||
min = _pop[0].objectiveVector()[obj];
|
||||
max = _pop[_pop.size()-1].objectiveVector()[obj];
|
||||
// set the diversity value to infiny for min and max
|
||||
_pop[0].diversity(inf());
|
||||
_pop[_pop.size()-1].diversity(inf());
|
||||
for (unsigned int i=1; i<_pop.size()-1; i++)
|
||||
{
|
||||
distance = (_pop[i+1].objectiveVector()[obj] - _pop[i-1].objectiveVector()[obj]) / (max-min);
|
||||
_pop[i].diversity(_pop[i].diversity() + distance);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOCROWDINGDIVERSITYASSIGNMENT_H_*/
|
||||
76
trunk/moeo/src/diversity/moeoDiversityAssignment.h
Normal file
76
trunk/moeo/src/diversity/moeoDiversityAssignment.h
Normal file
|
|
@ -0,0 +1,76 @@
|
|||
/*
|
||||
* <moeoDiversityAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEODIVERSITYASSIGNMENT_H_
|
||||
#define MOEODIVERSITYASSIGNMENT_H_
|
||||
|
||||
#include <eoFunctor.h>
|
||||
#include <eoPop.h>
|
||||
|
||||
/**
|
||||
* Functor that sets the diversity values of a whole population.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoDiversityAssignment : public eoUF < eoPop < MOEOT > &, void >
|
||||
{
|
||||
public:
|
||||
|
||||
/** The type for objective vector */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Updates the diversity values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
*/
|
||||
virtual void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec) = 0;
|
||||
|
||||
|
||||
/**
|
||||
* Updates the diversity values of the whole population _pop by taking the deletion of the individual _moeo into account.
|
||||
* @param _pop the population
|
||||
* @param _moeo the individual
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, MOEOT & _moeo)
|
||||
{
|
||||
updateByDeleting(_pop, _moeo.objectiveVector());
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEODIVERSITYASSIGNMENT_H_*/
|
||||
84
trunk/moeo/src/diversity/moeoDummyDiversityAssignment.h
Normal file
84
trunk/moeo/src/diversity/moeoDummyDiversityAssignment.h
Normal file
|
|
@ -0,0 +1,84 @@
|
|||
/*
|
||||
* <moeoDummyDiversityAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEODUMMYDIVERSITYASSIGNMENT_H_
|
||||
#define MOEODUMMYDIVERSITYASSIGNMENT_H_
|
||||
|
||||
#include<diversity/moeoDiversityAssignment.h>
|
||||
|
||||
/**
|
||||
* moeoDummyDiversityAssignment is a moeoDiversityAssignment that gives the value '0' as the individual's diversity for a whole population if it is invalid.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoDummyDiversityAssignment : public moeoDiversityAssignment < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/** The type for objective vector */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Sets the diversity to '0' for every individuals of the population _pop if it is invalid
|
||||
* @param _pop the population
|
||||
*/
|
||||
void operator () (eoPop < MOEOT > & _pop)
|
||||
{
|
||||
for (unsigned int idx = 0; idx<_pop.size (); idx++)
|
||||
{
|
||||
if (_pop[idx].invalidDiversity())
|
||||
{
|
||||
// set the diversity to 0
|
||||
_pop[idx].diversity(0.0);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Updates the diversity values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec)
|
||||
{
|
||||
// nothing to do... ;-)
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEODUMMYDIVERSITYASSIGNMENT_H_*/
|
||||
|
|
@ -0,0 +1,175 @@
|
|||
/*
|
||||
* <moeoFrontByFrontCrowdingDiversityAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2009
|
||||
* (C) OPAC Team, LIFL, 2002-2009
|
||||
*
|
||||
* Arnaud Liefooghe, Waldo Cancino
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOFRONTBYFRONTCROWDINGDIVERSITYASSIGNMENT2_H_
|
||||
#define MOEOFRONTBYFRONTCROWDINGDIVERSITYASSIGNMENT2_H_
|
||||
|
||||
#include <diversity/moeoCrowdingDiversityAssignment.h>
|
||||
#include <comparator/moeoFitnessThenDiversityComparator.h>
|
||||
#include <comparator/moeoPtrComparator.h>
|
||||
|
||||
|
||||
/**
|
||||
* Diversity assignment sheme based on crowding proposed in:
|
||||
* K. Deb, A. Pratap, S. Agarwal, T. Meyarivan, "A Fast and Elitist Multi-Objective Genetic Algorithm: NSGA-II", IEEE Transactions on Evolutionary Computation, vol. 6, no. 2 (2002).
|
||||
* Tis strategy assigns diversity values FRONT BY FRONT. It is, for instance, used in NSGA-II.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoFrontByFrontCrowdingDiversityAssignment : public moeoCrowdingDiversityAssignment < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/** the objective vector type of the solutions */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* @warning NOT IMPLEMENTED, DO NOTHING !
|
||||
* Updates the diversity values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
* @warning NOT IMPLEMENTED, DO NOTHING !
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec)
|
||||
{
|
||||
std::cout << "WARNING : updateByDeleting not implemented in moeoFrontByFrontCrowdingDistanceDiversityAssignment" << std::endl;
|
||||
}
|
||||
|
||||
private:
|
||||
|
||||
using moeoCrowdingDiversityAssignment < MOEOT >::inf;
|
||||
using moeoCrowdingDiversityAssignment < MOEOT >::tiny;
|
||||
|
||||
/**
|
||||
* Sets the distance values
|
||||
* @param _pop the population
|
||||
*/
|
||||
|
||||
void setDistances (eoPop <MOEOT> & _pop)
|
||||
{
|
||||
unsigned int a,b;
|
||||
double min, max, distance;
|
||||
unsigned int nObjectives = MOEOT::ObjectiveVector::nObjectives();
|
||||
// set diversity to 0 for every individual
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
_pop[i].diversity(0.0);
|
||||
}
|
||||
// sort the whole pop according to fitness values
|
||||
moeoFitnessThenDiversityComparator < MOEOT > fitnessComparator;
|
||||
std::vector<MOEOT *> sortedptrpop;
|
||||
sortedptrpop.resize(_pop.size());
|
||||
// due to intensive sort operations for this diversity assignment,
|
||||
// it is more efficient to perform sorts using only pointers to the
|
||||
// population members in order to avoid copy of individuals
|
||||
for(unsigned int i=0; i< _pop.size(); i++) sortedptrpop[i] = & (_pop[i]);
|
||||
//sort the pointers to population members
|
||||
moeoPtrComparator<MOEOT> cmp2( fitnessComparator);
|
||||
std::sort(sortedptrpop.begin(), sortedptrpop.end(), cmp2);
|
||||
// compute the crowding distance values for every individual "front" by "front" (front : from a to b)
|
||||
a = 0; // the front starts at a
|
||||
while (a < _pop.size())
|
||||
{
|
||||
b = lastIndex(sortedptrpop,a); // the front ends at b
|
||||
//b = lastIndex(_pop,a); // the front ends at b
|
||||
// if there is less than 2 individuals in the front...
|
||||
if ((b-a) < 2)
|
||||
{
|
||||
for (unsigned int i=a; i<=b; i++)
|
||||
{
|
||||
sortedptrpop[i]->diversity(inf());
|
||||
//_pop[i].diversity(inf());
|
||||
}
|
||||
}
|
||||
// else...
|
||||
else
|
||||
{
|
||||
// for each objective
|
||||
for (unsigned int obj=0; obj<nObjectives; obj++)
|
||||
{
|
||||
// sort in the descending order using the values of the objective 'obj'
|
||||
moeoOneObjectiveComparator < MOEOT > objComp(obj);
|
||||
moeoPtrComparator<MOEOT> cmp2( objComp );
|
||||
std::sort(sortedptrpop.begin(), sortedptrpop.end(), cmp2);
|
||||
// min & max
|
||||
min = (sortedptrpop[b])->objectiveVector()[obj];
|
||||
max = (sortedptrpop[a])->objectiveVector()[obj];
|
||||
|
||||
// avoid extreme case
|
||||
if (min == max)
|
||||
{
|
||||
min -= tiny();
|
||||
max += tiny();
|
||||
}
|
||||
// set the diversity value to infiny for min and max
|
||||
sortedptrpop[a]->diversity(inf());
|
||||
sortedptrpop[b]->diversity(inf());
|
||||
// set the diversity values for the other individuals
|
||||
for (unsigned int i=a+1; i<b; i++)
|
||||
{
|
||||
distance = ( sortedptrpop[i-1]->objectiveVector()[obj] - sortedptrpop[i+1]->objectiveVector()[obj] ) / (max-min);
|
||||
sortedptrpop[i]->diversity(sortedptrpop[i]->diversity() + distance);
|
||||
}
|
||||
}
|
||||
}
|
||||
// go to the next front
|
||||
a = b+1;
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
|
||||
/**
|
||||
* Returns the index of the last individual having the same fitness value than _pop[_start]
|
||||
* @param _pop the vector of pointers to population individuals
|
||||
* @param _start the index to start from
|
||||
*/
|
||||
|
||||
unsigned int lastIndex (std::vector<MOEOT *> & _pop, unsigned int _start)
|
||||
{
|
||||
unsigned int i=_start;
|
||||
while ( (i<_pop.size()-1) && (_pop[i]->fitness()==_pop[i+1]->fitness()) )
|
||||
{
|
||||
i++;
|
||||
}
|
||||
return i;
|
||||
}
|
||||
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOFRONTBYFRONTCROWDINGDIVERSITYASSIGNMENT_H_*/
|
||||
|
|
@ -0,0 +1,130 @@
|
|||
/*
|
||||
* <moeoFrontByFrontSharingDiversityAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOFRONTBYFRONTSHARINGDIVERSITYASSIGNMENT_H_
|
||||
#define MOEOFRONTBYFRONTSHARINGDIVERSITYASSIGNMENT_H_
|
||||
|
||||
#include <diversity/moeoSharingDiversityAssignment.h>
|
||||
|
||||
/**
|
||||
* Sharing assignment scheme on the way it is used in NSGA.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoFrontByFrontSharingDiversityAssignment : public moeoSharingDiversityAssignment < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/** the objective vector type of the solutions */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Ctor
|
||||
* @param _distance the distance used to compute the neighborhood of solutions (can be related to the decision space or the objective space)
|
||||
* @param _nicheSize neighborhood size in terms of radius distance (closely related to the way the distances are computed)
|
||||
* @param _alpha parameter used to regulate the shape of the sharing function
|
||||
*/
|
||||
moeoFrontByFrontSharingDiversityAssignment(moeoDistance<MOEOT,double> & _distance, double _nicheSize = 0.5, double _alpha = 2.0) : moeoSharingDiversityAssignment < MOEOT >(_distance, _nicheSize, _alpha)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with an euclidean distance (with normalized objective values) in the objective space is used as default
|
||||
* @param _nicheSize neighborhood size in terms of radius distance (closely related to the way the distances are computed)
|
||||
* @param _alpha parameter used to regulate the shape of the sharing function
|
||||
*/
|
||||
moeoFrontByFrontSharingDiversityAssignment(double _nicheSize = 0.5, double _alpha = 2.0) : moeoSharingDiversityAssignment < MOEOT >(_nicheSize, _alpha)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* @warning NOT IMPLEMENTED, DO NOTHING !
|
||||
* Updates the diversity values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
* @warning NOT IMPLEMENTED, DO NOTHING !
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec)
|
||||
{
|
||||
std::cout << "WARNING : updateByDeleting not implemented in moeoSharingDiversityAssignment" << std::endl;
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
using moeoSharingDiversityAssignment < MOEOT >::distance;
|
||||
using moeoSharingDiversityAssignment < MOEOT >::nicheSize;
|
||||
using moeoSharingDiversityAssignment < MOEOT >::sh;
|
||||
|
||||
|
||||
/**
|
||||
* Sets similarities FRONT BY FRONT for every solution contained in the population _pop
|
||||
* @param _pop the population
|
||||
*/
|
||||
void setSimilarities(eoPop < MOEOT > & _pop)
|
||||
{
|
||||
// compute distances between every individuals
|
||||
moeoDistanceMatrix < MOEOT , double > dMatrix (_pop.size(), distance);
|
||||
dMatrix(_pop);
|
||||
// sets the distance to bigger than the niche size for every couple of solutions that do not belong to the same front
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
for (unsigned int j=0; j<i; j++)
|
||||
{
|
||||
if (_pop[i].fitness() != _pop[j].fitness())
|
||||
{
|
||||
dMatrix[i][j] = nicheSize;
|
||||
dMatrix[j][i] = nicheSize;
|
||||
}
|
||||
}
|
||||
}
|
||||
// compute similarities
|
||||
double sum;
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
sum = 0.0;
|
||||
for (unsigned int j=0; j<_pop.size(); j++)
|
||||
{
|
||||
sum += sh(dMatrix[i][j]);
|
||||
}
|
||||
_pop[i].diversity(sum);
|
||||
}
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOFRONTBYFRONTSHARINGDIVERSITYASSIGNMENT_H_*/
|
||||
|
|
@ -0,0 +1,173 @@
|
|||
/*
|
||||
* <moeoNearestNeighborDiversityAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Lille-Nord Europe, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jeremie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
// moeoNearestNeighborDiversityAssignment.h
|
||||
//-----------------------------------------------------------------------------
|
||||
#ifndef MOEONEARESTNEIGHBORDIVERSITYASSIGNMENT_H_
|
||||
#define MOEONEARESTNEIGHBORDIVERSITYASSIGNMENT_H_
|
||||
|
||||
#include <list>
|
||||
#include <diversity/moeoDiversityAssignment.h>
|
||||
#include <archive/moeoUnboundedArchive.h>
|
||||
#include <archive/moeoArchive.h>
|
||||
|
||||
/**
|
||||
* moeoNearestNeighborDiversityAssignment is a moeoDiversityAssignment using distance between individuals to assign diversity.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoNearestNeighborDiversityAssignment : public moeoDiversityAssignment < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/** The type for objective vector */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Default ctor
|
||||
* @param _index index for find the k-ieme nearest neighbor, _index correspond to k
|
||||
*/
|
||||
moeoNearestNeighborDiversityAssignment(unsigned int _index=1):distance(defaultDistance), archive(defaultArchive), index(_index)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own archive
|
||||
* @param _archive the archive used
|
||||
* @param _index index for find the k-ieme nearest neighbor, _index correspond to k
|
||||
*/
|
||||
moeoNearestNeighborDiversityAssignment(moeoArchive <MOEOT>& _archive, unsigned int _index=1) : distance(defaultDistance), archive(_archive), index(_index)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own distance
|
||||
* @param _dist the distance used
|
||||
* @param _index index for find the k-ieme nearest neighbor, _index correspond to k
|
||||
*/
|
||||
moeoNearestNeighborDiversityAssignment(moeoDistance <MOEOT, double>& _dist, unsigned int _index=1) : distance(_dist), archive(defaultArchive), index(_index)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own distance and archive
|
||||
* @param _dist the distance used
|
||||
* @param _archive the archive used
|
||||
* @param _index index for find the k-ieme nearest neighbor, _index correspond to k
|
||||
*/
|
||||
moeoNearestNeighborDiversityAssignment(moeoDistance <MOEOT, double>& _dist, moeoArchive <MOEOT>& _archive, unsigned int _index=1) : distance(_dist), archive(_archive), index(_index)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Affect the diversity to the pop, diversity corresponding to the k-ieme nearest neighbor.
|
||||
* @param _pop the population
|
||||
*/
|
||||
void operator () (eoPop < MOEOT > & _pop)
|
||||
{
|
||||
unsigned int i = _pop.size();
|
||||
unsigned int j = archive.size();
|
||||
double tmp=0;
|
||||
std::vector< std::list<double> > matrice(i+j);
|
||||
if (i+j>0)
|
||||
{
|
||||
for (unsigned k=0; k<i+j-1; k++)
|
||||
{
|
||||
for (unsigned l=k+1; l<i+j; l++)
|
||||
{
|
||||
if ( (k<i) && (l<i) )
|
||||
tmp=distance(_pop[k], _pop[l]);
|
||||
else if ( (k<i) && (l>=i) )
|
||||
tmp=distance(_pop[k], archive[l-i]);
|
||||
else
|
||||
tmp=distance(archive[k-i], archive[l-i]);
|
||||
matrice[k].push_back(tmp);
|
||||
matrice[l].push_back(tmp);
|
||||
}
|
||||
}
|
||||
}
|
||||
for (unsigned int k=0; k<i+j; k++)
|
||||
matrice[k].sort();
|
||||
for (unsigned int k=0; k<i; k++)
|
||||
_pop[k].diversity(-1 * 1/(2+getElement(matrice[k])));
|
||||
for (unsigned int k=i; k<i+j; k++)
|
||||
archive[k-i].diversity(-1 * 1/(2+getElement(matrice[k])));
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* @warning NOT IMPLEMENTED, DOES NOTHING !
|
||||
* Updates the diversity values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
* @warning NOT IMPLEMENTED, DOES NOTHING !
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec)
|
||||
{
|
||||
std::cout << "WARNING : updateByDeleting not implemented in moeoNearestNeighborDiversityAssignment" << std::endl;
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/** Distance */
|
||||
moeoDistance <MOEOT, double> & distance;
|
||||
/** Default distance */
|
||||
moeoEuclideanDistance < MOEOT > defaultDistance;
|
||||
/** Archive */
|
||||
moeoArchive < MOEOT > & archive;
|
||||
/** Default archive */
|
||||
moeoUnboundedArchive < MOEOT > defaultArchive;
|
||||
/** the index corresponding to k for search the k-ieme nearest neighbor */
|
||||
unsigned int index;
|
||||
|
||||
|
||||
/**
|
||||
* Return the index-th element of the list _myList
|
||||
* @param _myList the list which contains distances
|
||||
*/
|
||||
double getElement(std::list<double> _myList)
|
||||
{
|
||||
std::list<double>::iterator it= _myList.begin();
|
||||
for (unsigned int i=1; i< std::min((unsigned int)_myList.size(),index); i++)
|
||||
it++;
|
||||
return *it;
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEONEARESTNEIGHBORDIVERSITYASSIGNEMENT_H_*/
|
||||
167
trunk/moeo/src/diversity/moeoSharingDiversityAssignment.h
Normal file
167
trunk/moeo/src/diversity/moeoSharingDiversityAssignment.h
Normal file
|
|
@ -0,0 +1,167 @@
|
|||
/*
|
||||
* <moeoSharingDiversityAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOSHARINGDIVERSITYASSIGNMENT_H_
|
||||
#define MOEOSHARINGDIVERSITYASSIGNMENT_H_
|
||||
|
||||
#include <eoPop.h>
|
||||
#include <comparator/moeoDiversityThenFitnessComparator.h>
|
||||
#include <distance/moeoDistance.h>
|
||||
#include <distance/moeoDistanceMatrix.h>
|
||||
#include <distance/moeoEuclideanDistance.h>
|
||||
#include <diversity/moeoDiversityAssignment.h>
|
||||
|
||||
/**
|
||||
* Sharing assignment scheme originally porposed by:
|
||||
* D. E. Goldberg, "Genetic Algorithms in Search, Optimization and Machine Learning", Addision-Wesley, MA, USA (1989).
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoSharingDiversityAssignment : public moeoDiversityAssignment < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/** the objective vector type of the solutions */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Ctor
|
||||
* @param _distance the distance used to compute the neighborhood of solutions (can be related to the decision space or the objective space)
|
||||
* @param _nicheSize neighborhood size in terms of radius distance (closely related to the way the distances are computed)
|
||||
* @param _alpha parameter used to regulate the shape of the sharing function
|
||||
*/
|
||||
moeoSharingDiversityAssignment(moeoDistance<MOEOT,double> & _distance, double _nicheSize = 0.5, double _alpha = 1.0) : distance(_distance), nicheSize(_nicheSize), alpha(_alpha)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor with an euclidean distance (with normalized objective values) in the objective space is used as default
|
||||
* @param _nicheSize neighborhood size in terms of radius distance (closely related to the way the distances are computed)
|
||||
* @param _alpha parameter used to regulate the shape of the sharing function
|
||||
*/
|
||||
moeoSharingDiversityAssignment(double _nicheSize = 0.5, double _alpha = 1.0) : distance(defaultDistance), nicheSize(_nicheSize), alpha(_alpha)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Sets diversity values for every solution contained in the population _pop
|
||||
* @param _pop the population
|
||||
*/
|
||||
void operator()(eoPop < MOEOT > & _pop)
|
||||
{
|
||||
// 1 - set simuilarities
|
||||
setSimilarities(_pop);
|
||||
// 2 - a higher diversity is better, so the values need to be inverted
|
||||
moeoDiversityThenFitnessComparator < MOEOT > divComparator;
|
||||
double max = std::max_element(_pop.begin(), _pop.end(), divComparator)->diversity();
|
||||
for (unsigned int i=0 ; i<_pop.size() ; i++)
|
||||
{
|
||||
_pop[i].diversity(max - _pop[i].diversity());
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* @warning NOT IMPLEMENTED, DO NOTHING !
|
||||
* Updates the diversity values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
* @warning NOT IMPLEMENTED, DO NOTHING !
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec)
|
||||
{
|
||||
std::cout << "WARNING : updateByDeleting not implemented in moeoSharingDiversityAssignment" << std::endl;
|
||||
}
|
||||
|
||||
|
||||
protected:
|
||||
|
||||
/** the distance used to compute the neighborhood of solutions */
|
||||
moeoDistance < MOEOT , double > & distance;
|
||||
/** euclidean distancein the objective space (can be used as default) */
|
||||
moeoEuclideanDistance < MOEOT > defaultDistance;
|
||||
/** neighborhood size in terms of radius distance */
|
||||
double nicheSize;
|
||||
/** parameter used to regulate the shape of the sharing function */
|
||||
double alpha;
|
||||
|
||||
|
||||
/**
|
||||
* Sets similarities for every solution contained in the population _pop
|
||||
* @param _pop the population
|
||||
*/
|
||||
virtual void setSimilarities(eoPop < MOEOT > & _pop)
|
||||
{
|
||||
// compute distances between every individuals
|
||||
moeoDistanceMatrix < MOEOT , double > dMatrix (_pop.size(), distance);
|
||||
dMatrix(_pop);
|
||||
// compute similarities
|
||||
double sum;
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
sum = 0.0;
|
||||
for (unsigned int j=0; j<_pop.size(); j++)
|
||||
{
|
||||
sum += sh(dMatrix[i][j]);
|
||||
}
|
||||
_pop[i].diversity(sum);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Sharing function
|
||||
* @param _dist the distance value
|
||||
*/
|
||||
double sh(double _dist)
|
||||
{
|
||||
double result;
|
||||
if (_dist < nicheSize)
|
||||
{
|
||||
result = 1.0 - pow(_dist / nicheSize, alpha);
|
||||
}
|
||||
else
|
||||
{
|
||||
result = 0.0;
|
||||
}
|
||||
return result;
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
|
||||
#endif /*MOEOSHARINGDIVERSITYASSIGNMENT_H_*/
|
||||
203
trunk/moeo/src/do/make_checkpoint_moeo.h
Executable file
203
trunk/moeo/src/do/make_checkpoint_moeo.h
Executable file
|
|
@ -0,0 +1,203 @@
|
|||
/*
|
||||
* <make_checkpoint_moeo.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MAKE_CHECKPOINT_MOEO_H_
|
||||
#define MAKE_CHECKPOINT_MOEO_H_
|
||||
|
||||
#include <limits.h>
|
||||
#include <stdlib.h>
|
||||
#include <sstream>
|
||||
#include <eoContinue.h>
|
||||
#include <eoEvalFuncCounter.h>
|
||||
#include <utils/checkpointing>
|
||||
#include <utils/selectors.h>
|
||||
#include <utils/eoParser.h>
|
||||
#include <utils/eoState.h>
|
||||
#include <metric/moeoContributionMetric.h>
|
||||
#include <metric/moeoEntropyMetric.h>
|
||||
#include <utils/moeoArchiveUpdater.h>
|
||||
#include <utils/moeoArchiveObjectiveVectorSavingUpdater.h>
|
||||
#include <utils/moeoBinaryMetricSavingUpdater.h>
|
||||
|
||||
|
||||
bool testDirRes(std::string _dirName, bool _erase);
|
||||
|
||||
/**
|
||||
* This functions allows to build an eoCheckPoint for multi-objective optimization from the parser (partly taken from make_checkpoint_pareto.h)
|
||||
* @param _parser the parser
|
||||
* @param _state to store allocated objects
|
||||
* @param _eval the funtions evaluator
|
||||
* @param _continue the stopping crietria
|
||||
* @param _pop the population
|
||||
* @param _archive the archive of non-dominated solutions
|
||||
*/
|
||||
template < class MOEOT >
|
||||
eoCheckPoint < MOEOT > & do_make_checkpoint_moeo (eoParser & _parser, eoState & _state, eoEvalFuncCounter < MOEOT > & _eval, eoContinue < MOEOT > & _continue, eoPop < MOEOT > & _pop, moeoArchive < MOEOT > & _archive)
|
||||
{
|
||||
eoCheckPoint < MOEOT > & checkpoint = _state.storeFunctor(new eoCheckPoint < MOEOT > (_continue));
|
||||
/* the objective vector type */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
///////////////////
|
||||
// Counters
|
||||
//////////////////
|
||||
// is nb Eval to be used as counter?
|
||||
//bool useEval = _parser.getORcreateParam(true, "useEval", "Use nb of eval. as counter (vs nb of gen.)", '\0', "Output").value();
|
||||
// Create anyway a generation-counter parameter
|
||||
eoValueParam<unsigned int> *generationCounter = new eoValueParam<unsigned int>(0, "Gen.");
|
||||
// Create an incrementor (sub-class of eoUpdater).
|
||||
eoIncrementor<unsigned int> & increment = _state.storeFunctor( new eoIncrementor<unsigned int>(generationCounter->value()) );
|
||||
// Add it to the checkpoint
|
||||
checkpoint.add(increment);
|
||||
// dir for DISK output
|
||||
std::string & dirName = _parser.getORcreateParam(std::string("Res"), "resDir", "Directory to store DISK outputs", '\0', "Output").value();
|
||||
// shoudl we empty it if exists
|
||||
eoValueParam<bool>& eraseParam = _parser.getORcreateParam(true, "eraseDir", "erase files in dirName if any", '\0', "Output");
|
||||
bool dirOK = false; // not tested yet
|
||||
|
||||
// Dump of the whole population
|
||||
//-----------------------------
|
||||
bool printPop = _parser.getORcreateParam(false, "printPop", "Print sorted pop. every gen.", '\0', "Output").value();
|
||||
eoSortedPopStat<MOEOT> * popStat;
|
||||
if ( printPop ) // we do want pop dump
|
||||
{
|
||||
popStat = & _state.storeFunctor(new eoSortedPopStat<MOEOT>);
|
||||
checkpoint.add(*popStat);
|
||||
}
|
||||
|
||||
//////////////////////////////////
|
||||
// State savers
|
||||
//////////////////////////////
|
||||
// feed the state to state savers
|
||||
// save state every N generation
|
||||
eoValueParam<unsigned int>& saveFrequencyParam = _parser.createParam((unsigned int)(0), "saveFrequency", "Save every F generation (0 = only final state, absent = never)", '\0', "Persistence" );
|
||||
if (_parser.isItThere(saveFrequencyParam))
|
||||
{
|
||||
// first make sure dirName is OK
|
||||
if (! dirOK )
|
||||
dirOK = testDirRes(dirName, eraseParam.value()); // TRUE
|
||||
unsigned int freq = (saveFrequencyParam.value()>0 ? saveFrequencyParam.value() : UINT_MAX );
|
||||
#ifdef _MSVC
|
||||
std::string stmp = dirName + "\generations";
|
||||
#else
|
||||
std::string stmp = dirName + "/generations";
|
||||
#endif
|
||||
eoCountedStateSaver *stateSaver1 = new eoCountedStateSaver(freq, _state, stmp);
|
||||
_state.storeFunctor(stateSaver1);
|
||||
checkpoint.add(*stateSaver1);
|
||||
}
|
||||
// save state every T seconds
|
||||
eoValueParam<unsigned int>& saveTimeIntervalParam = _parser.getORcreateParam((unsigned int)(0), "saveTimeInterval", "Save every T seconds (0 or absent = never)", '\0',"Persistence" );
|
||||
if (_parser.isItThere(saveTimeIntervalParam) && saveTimeIntervalParam.value()>0)
|
||||
{
|
||||
// first make sure dirName is OK
|
||||
if (! dirOK )
|
||||
dirOK = testDirRes(dirName, eraseParam.value()); // TRUE
|
||||
#ifdef _MSVC
|
||||
std::string stmp = dirName + "\time";
|
||||
#else
|
||||
std::string stmp = dirName + "/time";
|
||||
#endif
|
||||
eoTimedStateSaver *stateSaver2 = new eoTimedStateSaver(saveTimeIntervalParam.value(), _state, stmp);
|
||||
_state.storeFunctor(stateSaver2);
|
||||
checkpoint.add(*stateSaver2);
|
||||
}
|
||||
|
||||
///////////////////
|
||||
// Archive
|
||||
//////////////////
|
||||
// update the archive every generation
|
||||
bool updateArch = _parser.getORcreateParam(true, "updateArch", "Update the archive at each gen.", '\0', "Evolution Engine").value();
|
||||
if (updateArch)
|
||||
{
|
||||
moeoArchiveUpdater < MOEOT > * updater = new moeoArchiveUpdater < MOEOT > (_archive, _pop);
|
||||
_state.storeFunctor(updater);
|
||||
checkpoint.add(*updater);
|
||||
}
|
||||
// store the objective vectors contained in the archive every generation
|
||||
bool storeArch = _parser.getORcreateParam(false, "storeArch", "Store the archive's objective vectors at each gen.", '\0', "Output").value();
|
||||
if (storeArch)
|
||||
{
|
||||
if (! dirOK )
|
||||
dirOK = testDirRes(dirName, eraseParam.value()); // TRUE
|
||||
#ifdef _MSVC
|
||||
std::string stmp = dirName + "\arch";
|
||||
#else
|
||||
std::string stmp = dirName + "/arch";
|
||||
#endif
|
||||
moeoArchiveObjectiveVectorSavingUpdater < MOEOT > * save_updater = new moeoArchiveObjectiveVectorSavingUpdater < MOEOT > (_archive, stmp);
|
||||
_state.storeFunctor(save_updater);
|
||||
checkpoint.add(*save_updater);
|
||||
}
|
||||
// store the contribution of the non-dominated solutions
|
||||
bool cont = _parser.getORcreateParam(false, "contribution", "Store the contribution of the archive at each gen.", '\0', "Output").value();
|
||||
if (cont)
|
||||
{
|
||||
if (! dirOK )
|
||||
dirOK = testDirRes(dirName, eraseParam.value()); // TRUE
|
||||
#ifdef _MSVC
|
||||
std::string stmp = dirName + "\contribution";
|
||||
#else
|
||||
std::string stmp = dirName + "/contribution";
|
||||
#endif
|
||||
moeoContributionMetric < ObjectiveVector > * contribution = new moeoContributionMetric < ObjectiveVector >;
|
||||
moeoBinaryMetricSavingUpdater < MOEOT > * contribution_updater = new moeoBinaryMetricSavingUpdater < MOEOT > (*contribution, _archive, stmp);
|
||||
_state.storeFunctor(contribution_updater);
|
||||
checkpoint.add(*contribution_updater);
|
||||
}
|
||||
// store the entropy of the non-dominated solutions
|
||||
bool ent = _parser.getORcreateParam(false, "entropy", "Store the entropy of the archive at each gen.", '\0', "Output").value();
|
||||
if (ent)
|
||||
{
|
||||
if (! dirOK )
|
||||
dirOK = testDirRes(dirName, eraseParam.value()); // TRUE
|
||||
#ifdef _MSVC
|
||||
std::string stmp = dirName + "\entropy";
|
||||
#else
|
||||
std::string stmp = dirName + "/entropy";
|
||||
#endif
|
||||
moeoEntropyMetric < ObjectiveVector > * entropy = new moeoEntropyMetric < ObjectiveVector >;
|
||||
moeoBinaryMetricSavingUpdater < MOEOT > * entropy_updater = new moeoBinaryMetricSavingUpdater < MOEOT > (*entropy, _archive, stmp);
|
||||
_state.storeFunctor(entropy_updater);
|
||||
checkpoint.add(*entropy_updater);
|
||||
}
|
||||
|
||||
// and that's it for the (control and) output
|
||||
return checkpoint;
|
||||
}
|
||||
|
||||
#endif /*MAKE_CHECKPOINT_MOEO_H_*/
|
||||
131
trunk/moeo/src/do/make_continue_moeo.h
Executable file
131
trunk/moeo/src/do/make_continue_moeo.h
Executable file
|
|
@ -0,0 +1,131 @@
|
|||
/*
|
||||
* <make_continue_moeo.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MAKE_CONTINUE_MOEO_H_
|
||||
#define MAKE_CONTINUE_MOEO_H_
|
||||
|
||||
#include <eoCombinedContinue.h>
|
||||
#include <eoGenContinue.h>
|
||||
#include <eoEvalContinue.h>
|
||||
#include <eoFitContinue.h>
|
||||
#include <eoTimeContinue.h>
|
||||
#ifndef _MSC_VER
|
||||
#include <eoCtrlCContinue.h>
|
||||
#endif
|
||||
#include <utils/eoParser.h>
|
||||
#include <utils/eoState.h>
|
||||
|
||||
|
||||
/**
|
||||
* Helper function
|
||||
* @param _combined the eoCombinedContinue object
|
||||
* @param _cont the eoContinue to add
|
||||
*/
|
||||
template <class MOEOT>
|
||||
eoCombinedContinue<MOEOT> * make_combinedContinue(eoCombinedContinue<MOEOT> *_combined, eoContinue<MOEOT> *_cont)
|
||||
{
|
||||
if (_combined) // already exists
|
||||
_combined->add(*_cont);
|
||||
else
|
||||
_combined = new eoCombinedContinue<MOEOT>(*_cont);
|
||||
return _combined;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* This functions allows to build a eoContinue for multi-objective optimization from the parser (partly taken from make_continue_pareto.h)
|
||||
* @param _parser the parser
|
||||
* @param _state to store allocated objects
|
||||
* @param _eval the funtions evaluator
|
||||
*/
|
||||
template <class MOEOT>
|
||||
eoContinue<MOEOT> & do_make_continue_moeo(eoParser& _parser, eoState& _state, eoEvalFuncCounter<MOEOT> & _eval)
|
||||
{
|
||||
// the combined continue - to be filled
|
||||
eoCombinedContinue<MOEOT> *continuator = NULL;
|
||||
// First the eoGenContinue - need a default value so you can run blind
|
||||
// but we also need to be able to avoid it <--> 0
|
||||
eoValueParam<unsigned int>& maxGenParam = _parser.createParam((unsigned int)(100), "maxGen", "Maximum number of generations (0 = none)",'G',"Stopping criterion");
|
||||
if (maxGenParam.value()) // positive: -> define and store
|
||||
{
|
||||
eoGenContinue<MOEOT> *genCont = new eoGenContinue<MOEOT>(maxGenParam.value());
|
||||
_state.storeFunctor(genCont);
|
||||
// and "add" to combined
|
||||
continuator = make_combinedContinue<MOEOT>(continuator, genCont);
|
||||
}
|
||||
// maxEval
|
||||
eoValueParam<unsigned long>& maxEvalParam = _parser.getORcreateParam((unsigned long)(0), "maxEval", "Maximum number of evaluations (0 = none)", 'E', "Stopping criterion");
|
||||
if (maxEvalParam.value())
|
||||
{
|
||||
eoEvalContinue<MOEOT> *evalCont = new eoEvalContinue<MOEOT>(_eval, maxEvalParam.value());
|
||||
_state.storeFunctor(evalCont);
|
||||
// and "add" to combined
|
||||
continuator = make_combinedContinue<MOEOT>(continuator, evalCont);
|
||||
}
|
||||
// maxTime
|
||||
eoValueParam<unsigned long>& maxTimeParam = _parser.getORcreateParam((unsigned long)(0), "maxTime", "Maximum running time in seconds (0 = none)", 'T', "Stopping criterion");
|
||||
if (maxTimeParam.value()) // positive: -> define and store
|
||||
{
|
||||
eoTimeContinue<MOEOT> *timeCont = new eoTimeContinue<MOEOT>(maxTimeParam.value());
|
||||
_state.storeFunctor(timeCont);
|
||||
// and "add" to combined
|
||||
continuator = make_combinedContinue<MOEOT>(continuator, timeCont);
|
||||
}
|
||||
// CtrlC
|
||||
#ifndef _MSC_VER
|
||||
// the CtrlC interception (Linux only I'm afraid)
|
||||
eoCtrlCContinue<MOEOT> *ctrlCCont;
|
||||
eoValueParam<bool>& ctrlCParam = _parser.createParam(true, "CtrlC", "Terminate current generation upon Ctrl C",'C', "Stopping criterion");
|
||||
if (ctrlCParam.value())
|
||||
{
|
||||
ctrlCCont = new eoCtrlCContinue<MOEOT>;
|
||||
// store
|
||||
_state.storeFunctor(ctrlCCont);
|
||||
// add to combinedContinue
|
||||
continuator = make_combinedContinue<MOEOT>(continuator, ctrlCCont);
|
||||
}
|
||||
#endif
|
||||
// now check that there is at least one!
|
||||
if (!continuator)
|
||||
throw std::runtime_error("You MUST provide a stopping criterion");
|
||||
// OK, it's there: store in the eoState
|
||||
_state.storeFunctor(continuator);
|
||||
// and return
|
||||
return *continuator;
|
||||
}
|
||||
|
||||
#endif /*MAKE_CONTINUE_MOEO_H_*/
|
||||
297
trunk/moeo/src/do/make_ea_moeo.h
Executable file
297
trunk/moeo/src/do/make_ea_moeo.h
Executable file
|
|
@ -0,0 +1,297 @@
|
|||
/*
|
||||
* <make_ea_moeo.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MAKE_EA_MOEO_H_
|
||||
#define MAKE_EA_MOEO_H_
|
||||
|
||||
#include <stdlib.h>
|
||||
#include <eoContinue.h>
|
||||
#include <eoEvalFunc.h>
|
||||
#include <eoGeneralBreeder.h>
|
||||
#include <eoGenOp.h>
|
||||
#include <utils/eoParser.h>
|
||||
#include <utils/eoState.h>
|
||||
|
||||
#include <algo/moeoEA.h>
|
||||
#include <algo/moeoEasyEA.h>
|
||||
#include <archive/moeoArchive.h>
|
||||
#include <comparator/moeoAggregativeComparator.h>
|
||||
#include <comparator/moeoComparator.h>
|
||||
#include <comparator/moeoDiversityThenFitnessComparator.h>
|
||||
#include <comparator/moeoFitnessThenDiversityComparator.h>
|
||||
#include <diversity/moeoDiversityAssignment.h>
|
||||
#include <diversity/moeoDummyDiversityAssignment.h>
|
||||
#include <diversity/moeoFrontByFrontCrowdingDiversityAssignment.h>
|
||||
#include <diversity/moeoFrontByFrontSharingDiversityAssignment.h>
|
||||
#include <fitness/moeoDummyFitnessAssignment.h>
|
||||
#include <fitness/moeoExpBinaryIndicatorBasedFitnessAssignment.h>
|
||||
#include <fitness/moeoDominanceDepthFitnessAssignment.h>
|
||||
#include <fitness/moeoFitnessAssignment.h>
|
||||
#include <metric/moeoAdditiveEpsilonBinaryMetric.h>
|
||||
#include <metric/moeoHypervolumeBinaryMetric.h>
|
||||
#include <metric/moeoNormalizedSolutionVsSolutionBinaryMetric.h>
|
||||
#include <replacement/moeoElitistReplacement.h>
|
||||
#include <replacement/moeoEnvironmentalReplacement.h>
|
||||
#include <replacement/moeoGenerationalReplacement.h>
|
||||
#include <replacement/moeoReplacement.h>
|
||||
#include <selection/moeoDetTournamentSelect.h>
|
||||
#include <selection/moeoRandomSelect.h>
|
||||
#include <selection/moeoStochTournamentSelect.h>
|
||||
#include <selection/moeoSelectOne.h>
|
||||
#include <selection/moeoSelectors.h>
|
||||
|
||||
|
||||
/**
|
||||
* This functions allows to build a moeoEA from the parser
|
||||
* @param _parser the parser
|
||||
* @param _state to store allocated objects
|
||||
* @param _eval the funtions evaluator
|
||||
* @param _continue the stopping crietria
|
||||
* @param _op the variation operators
|
||||
* @param _archive the archive of non-dominated solutions
|
||||
*/
|
||||
template < class MOEOT >
|
||||
moeoEA < MOEOT > & do_make_ea_moeo(eoParser & _parser, eoState & _state, eoEvalFunc < MOEOT > & _eval, eoContinue < MOEOT > & _continue, eoGenOp < MOEOT > & _op, moeoArchive < MOEOT > & _archive)
|
||||
{
|
||||
|
||||
/* the objective vector type */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/* the fitness assignment strategy */
|
||||
std::string & fitnessParam = _parser.createParam(std::string("DomDepth"), "fitness",
|
||||
"Fitness assignment scheme: Dummy, DomDepth or IndicatorBased", 'F',
|
||||
"Evolution Engine").value();
|
||||
std::string & indicatorParam = _parser.createParam(std::string("Epsilon"), "indicator",
|
||||
"Binary indicator for IndicatorBased: Epsilon, Hypervolume", 'i',
|
||||
"Evolution Engine").value();
|
||||
double rho = _parser.createParam(1.1, "rho", "reference point for the hypervolume indicator", '\0',
|
||||
"Evolution Engine").value();
|
||||
double kappa = _parser.createParam(0.05, "kappa", "Scaling factor kappa for IndicatorBased", 'k',
|
||||
"Evolution Engine").value();
|
||||
moeoFitnessAssignment < MOEOT > * fitnessAssignment;
|
||||
if (fitnessParam == std::string("Dummy"))
|
||||
{
|
||||
fitnessAssignment = new moeoDummyFitnessAssignment < MOEOT> ();
|
||||
}
|
||||
else if (fitnessParam == std::string("DomDepth"))
|
||||
{
|
||||
fitnessAssignment = new moeoDominanceDepthFitnessAssignment < MOEOT> ();
|
||||
}
|
||||
else if (fitnessParam == std::string("IndicatorBased"))
|
||||
{
|
||||
// metric
|
||||
moeoNormalizedSolutionVsSolutionBinaryMetric < ObjectiveVector, double > *metric;
|
||||
if (indicatorParam == std::string("Epsilon"))
|
||||
{
|
||||
metric = new moeoAdditiveEpsilonBinaryMetric < ObjectiveVector >;
|
||||
}
|
||||
else if (indicatorParam == std::string("Hypervolume"))
|
||||
{
|
||||
metric = new moeoHypervolumeBinaryMetric < ObjectiveVector > (rho);
|
||||
}
|
||||
else
|
||||
{
|
||||
std::string stmp = std::string("Invalid binary quality indicator: ") + indicatorParam;
|
||||
throw std::runtime_error(stmp.c_str());
|
||||
}
|
||||
fitnessAssignment = new moeoExpBinaryIndicatorBasedFitnessAssignment < MOEOT > (*metric, kappa);
|
||||
}
|
||||
else
|
||||
{
|
||||
std::string stmp = std::string("Invalid fitness assignment strategy: ") + fitnessParam;
|
||||
throw std::runtime_error(stmp.c_str());
|
||||
}
|
||||
_state.storeFunctor(fitnessAssignment);
|
||||
|
||||
|
||||
/* the diversity assignment strategy */
|
||||
eoValueParam<eoParamParamType> & diversityParam = _parser.createParam(eoParamParamType("Dummy"), "diversity",
|
||||
"Diversity assignment scheme: Dummy, Sharing(nicheSize) or Crowding", 'D', "Evolution Engine");
|
||||
eoParamParamType & diversityParamValue = diversityParam.value();
|
||||
moeoDiversityAssignment < MOEOT > * diversityAssignment;
|
||||
if (diversityParamValue.first == std::string("Dummy"))
|
||||
{
|
||||
diversityAssignment = new moeoDummyDiversityAssignment < MOEOT> ();
|
||||
}
|
||||
else if (diversityParamValue.first == std::string("Sharing"))
|
||||
{
|
||||
double nicheSize;
|
||||
if (!diversityParamValue.second.size()) // no parameter added
|
||||
{
|
||||
std::cerr << "WARNING, no niche size given for Sharing, using 0.5" << std::endl;
|
||||
nicheSize = 0.5;
|
||||
diversityParamValue.second.push_back(std::string("0.5"));
|
||||
}
|
||||
else
|
||||
{
|
||||
nicheSize = atoi(diversityParamValue.second[0].c_str());
|
||||
}
|
||||
diversityAssignment = new moeoFrontByFrontSharingDiversityAssignment < MOEOT> (nicheSize);
|
||||
}
|
||||
else if (diversityParamValue.first == std::string("Crowding"))
|
||||
{
|
||||
diversityAssignment = new moeoFrontByFrontCrowdingDiversityAssignment < MOEOT> ();
|
||||
}
|
||||
else
|
||||
{
|
||||
std::string stmp = std::string("Invalid diversity assignment strategy: ") + diversityParamValue.first;
|
||||
throw std::runtime_error(stmp.c_str());
|
||||
}
|
||||
_state.storeFunctor(diversityAssignment);
|
||||
|
||||
|
||||
/* the comparator strategy */
|
||||
std::string & comparatorParam = _parser.createParam(std::string("FitnessThenDiversity"), "comparator",
|
||||
"Comparator scheme: FitnessThenDiversity, DiversityThenFitness or Aggregative", 'c', "Evolution Engine").value();
|
||||
moeoComparator < MOEOT > * comparator;
|
||||
if (comparatorParam == std::string("FitnessThenDiversity"))
|
||||
{
|
||||
comparator = new moeoFitnessThenDiversityComparator < MOEOT> ();
|
||||
}
|
||||
else if (comparatorParam == std::string("DiversityThenFitness"))
|
||||
{
|
||||
comparator = new moeoDiversityThenFitnessComparator < MOEOT> ();
|
||||
}
|
||||
else if (comparatorParam == std::string("Aggregative"))
|
||||
{
|
||||
comparator = new moeoAggregativeComparator < MOEOT> ();
|
||||
}
|
||||
else
|
||||
{
|
||||
std::string stmp = std::string("Invalid comparator strategy: ") + comparatorParam;
|
||||
throw std::runtime_error(stmp.c_str());
|
||||
}
|
||||
_state.storeFunctor(comparator);
|
||||
|
||||
|
||||
/* the selection strategy */
|
||||
eoValueParam < eoParamParamType > & selectionParam = _parser.createParam(eoParamParamType("DetTour(2)"), "selection",
|
||||
"Selection scheme: DetTour(T), StochTour(t) or Random", 'S', "Evolution Engine");
|
||||
eoParamParamType & ppSelect = selectionParam.value();
|
||||
moeoSelectOne < MOEOT > * select;
|
||||
if (ppSelect.first == std::string("DetTour"))
|
||||
{
|
||||
unsigned int tSize;
|
||||
if (!ppSelect.second.size()) // no parameter added
|
||||
{
|
||||
std::cerr << "WARNING, no parameter passed to DetTour, using 2" << std::endl;
|
||||
tSize = 2;
|
||||
// put back 2 in parameter for consistency (and status file)
|
||||
ppSelect.second.push_back(std::string("2"));
|
||||
}
|
||||
else // parameter passed by user as DetTour(T)
|
||||
{
|
||||
tSize = atoi(ppSelect.second[0].c_str());
|
||||
}
|
||||
select = new moeoDetTournamentSelect < MOEOT > (*comparator, tSize);
|
||||
}
|
||||
else if (ppSelect.first == std::string("StochTour"))
|
||||
{
|
||||
double tRate;
|
||||
if (!ppSelect.second.size()) // no parameter added
|
||||
{
|
||||
std::cerr << "WARNING, no parameter passed to StochTour, using 1" << std::endl;
|
||||
tRate = 1;
|
||||
// put back 1 in parameter for consistency (and status file)
|
||||
ppSelect.second.push_back(std::string("1"));
|
||||
}
|
||||
else // parameter passed by user as StochTour(T)
|
||||
{
|
||||
tRate = atof(ppSelect.second[0].c_str());
|
||||
}
|
||||
select = new moeoStochTournamentSelect < MOEOT > (*comparator, tRate);
|
||||
}
|
||||
/*
|
||||
else if (ppSelect.first == string("Roulette"))
|
||||
{
|
||||
// TO DO !
|
||||
// ...
|
||||
}
|
||||
*/
|
||||
else if (ppSelect.first == std::string("Random"))
|
||||
{
|
||||
select = new moeoRandomSelect <MOEOT > ();
|
||||
}
|
||||
else
|
||||
{
|
||||
std::string stmp = std::string("Invalid selection strategy: ") + ppSelect.first;
|
||||
throw std::runtime_error(stmp.c_str());
|
||||
}
|
||||
_state.storeFunctor(select);
|
||||
|
||||
|
||||
/* the replacement strategy */
|
||||
std::string & replacementParam = _parser.createParam(std::string("Elitist"), "replacement",
|
||||
"Replacement scheme: Elitist, Environmental or Generational", 'R', "Evolution Engine").value();
|
||||
moeoReplacement < MOEOT > * replace;
|
||||
if (replacementParam == std::string("Elitist"))
|
||||
{
|
||||
replace = new moeoElitistReplacement < MOEOT> (*fitnessAssignment, *diversityAssignment, *comparator);
|
||||
}
|
||||
else if (replacementParam == std::string("Environmental"))
|
||||
{
|
||||
replace = new moeoEnvironmentalReplacement < MOEOT> (*fitnessAssignment, *diversityAssignment, *comparator);
|
||||
}
|
||||
else if (replacementParam == std::string("Generational"))
|
||||
{
|
||||
replace = new moeoGenerationalReplacement < MOEOT> ();
|
||||
}
|
||||
else
|
||||
{
|
||||
std::string stmp = std::string("Invalid replacement strategy: ") + replacementParam;
|
||||
throw std::runtime_error(stmp.c_str());
|
||||
}
|
||||
_state.storeFunctor(replace);
|
||||
|
||||
|
||||
/* the number of offspring */
|
||||
eoValueParam < eoHowMany > & offspringRateParam = _parser.createParam(eoHowMany(1.0), "nbOffspring",
|
||||
"Number of offspring (percentage or absolute)", 'O', "Evolution Engine");
|
||||
|
||||
|
||||
// the general breeder
|
||||
eoGeneralBreeder < MOEOT > * breed = new eoGeneralBreeder < MOEOT > (*select, _op, offspringRateParam.value());
|
||||
_state.storeFunctor(breed);
|
||||
// the eoEasyEA
|
||||
moeoEA < MOEOT > * algo = new moeoEasyEA < MOEOT > (_continue, _eval, *breed, *replace, *fitnessAssignment, *diversityAssignment);
|
||||
_state.storeFunctor(algo);
|
||||
return *algo;
|
||||
|
||||
}
|
||||
|
||||
#endif /*MAKE_EA_MOEO_H_*/
|
||||
129
trunk/moeo/src/explorer/moeoExhaustiveNeighborhoodExplorer.h
Normal file
129
trunk/moeo/src/explorer/moeoExhaustiveNeighborhoodExplorer.h
Normal file
|
|
@ -0,0 +1,129 @@
|
|||
/*
|
||||
* <moeoExhaustiveNeighborhoodExplorer.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef _MOEOEXHAUSTIVENEIGHBORHOODEXPLORER_H
|
||||
#define _MOEOEXHAUSTIVENEIGHBORHOODEXPLORER_H
|
||||
|
||||
#include <eoPop.h>
|
||||
#include <neighborhood/moNeighbor.h>
|
||||
#include <neighborhood/moNeighborhood.h>
|
||||
#include <explorer/moeoPopNeighborhoodExplorer.h>
|
||||
#include <eval/moEval.h>
|
||||
|
||||
/**
|
||||
* Explorer which explore all the neighborhood
|
||||
*/
|
||||
template < class Neighbor>
|
||||
class moeoExhaustiveNeighborhoodExplorer : public moeoPopNeighborhoodExplorer <Neighbor>
|
||||
{
|
||||
/** Alias for the type */
|
||||
typedef typename Neighbor::EOT MOEOT;
|
||||
/** Alias for the objeciveVector */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
public:
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
* @param _neighborhood a neighborhood
|
||||
* @param _eval neighbor evaluation function
|
||||
*/
|
||||
moeoExhaustiveNeighborhoodExplorer(
|
||||
moNeighborhood<Neighbor>& _neighborhood,
|
||||
moEval < Neighbor > & _eval):
|
||||
neighborhood(_neighborhood), eval(_eval){}
|
||||
|
||||
/**
|
||||
* functor to explore the neighborhood
|
||||
* @param _src the population to explore
|
||||
* @param _select contains index of individuals from the population to explore
|
||||
* @param _dest contains new generated individuals
|
||||
*/
|
||||
void operator()(eoPop < MOEOT > & _src, std::vector < unsigned int> _select, eoPop < MOEOT > & _dest)
|
||||
{
|
||||
for(unsigned int i=0; i<_select.size(); i++)
|
||||
explore(_src[_select[i]], _dest);
|
||||
}
|
||||
|
||||
private:
|
||||
|
||||
/**
|
||||
* explorer of one individual
|
||||
* @param _src the individual to explore
|
||||
* @param _dest contains new generated individuals
|
||||
*/
|
||||
void explore(MOEOT & _src , eoPop < MOEOT > & _dest)
|
||||
{
|
||||
//if the neighborhood is not empty
|
||||
if(neighborhood.hasNeighbor(_src)){
|
||||
//init the neighborhood
|
||||
neighborhood.init(_src, neighbor);
|
||||
//copy the solution (_src) at the end of the destination (_dest)
|
||||
_dest.push_back(_src);
|
||||
//eval the neighbor
|
||||
eval(_dest.back(),neighbor);
|
||||
//move the copy
|
||||
neighbor.move(_dest.back());
|
||||
//affect objective vector to the copy
|
||||
_dest.back().objectiveVector(neighbor.fitness());
|
||||
//fix its flag to 0 (unvisited solution)
|
||||
_dest.back().flag(0);
|
||||
//repeat all instructions for each neighbor in the neighborhood
|
||||
while (neighborhood.cont(_src)){
|
||||
neighborhood.next(_src, neighbor);
|
||||
_dest.push_back(_src);
|
||||
eval(_dest.back(),neighbor);
|
||||
neighbor.move(_dest.back());
|
||||
_dest.back().objectiveVector(neighbor.fitness());
|
||||
_dest.back().flag(0);
|
||||
}
|
||||
//fix the source flag to 1 (visited solution)
|
||||
_src.flag(1);
|
||||
}
|
||||
}
|
||||
|
||||
/** Neighbor */
|
||||
Neighbor neighbor;
|
||||
/** Neighborhood */
|
||||
moNeighborhood<Neighbor>& neighborhood;
|
||||
/** neighbor evaluation function */
|
||||
moEval < Neighbor > & eval;
|
||||
|
||||
};
|
||||
|
||||
#endif /*_MOEOEXHAUSTIVENEIGHBORHOODEXPLORER_H_*/
|
||||
124
trunk/moeo/src/explorer/moeoFirstImprovingNeighborhoodExplorer.h
Normal file
124
trunk/moeo/src/explorer/moeoFirstImprovingNeighborhoodExplorer.h
Normal file
|
|
@ -0,0 +1,124 @@
|
|||
/*
|
||||
* <moeoFirstImprovingNeighborhoodExplorer.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef _MOEOFIRSTIMPROVINGNEIGHBORHOODEXPLORER_H
|
||||
#define _MOEOFIRSTIMPROVINGNEIGHBORHOODEXPLORER_H
|
||||
|
||||
#include <explorer/moeoSubNeighborhoodExplorer.h>
|
||||
|
||||
/**
|
||||
* Explorer which explore the neighborhood until a improving neighbor is found.
|
||||
* No dominating neighbor are keeped.
|
||||
*/
|
||||
template < class Neighbor >
|
||||
class moeoFirstImprovingNeighborhoodExplorer : public moeoSubNeighborhoodExplorer < Neighbor >
|
||||
{
|
||||
/** Alias for the type */
|
||||
typedef typename Neighbor::EOT MOEOT;
|
||||
/** Alias for the objeciveVector */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
using moeoSubNeighborhoodExplorer<Neighbor>::neighborhood;
|
||||
using moeoSubNeighborhoodExplorer<Neighbor>::neighbor;
|
||||
|
||||
public:
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
* @param _neighborhood a neighborhood
|
||||
* @param _eval neighbor evaluation function
|
||||
*/
|
||||
moeoFirstImprovingNeighborhoodExplorer(
|
||||
moNeighborhood<Neighbor>& _neighborhood,
|
||||
moEval < Neighbor > & _eval):
|
||||
moeoSubNeighborhoodExplorer< Neighbor >(_neighborhood, 0), eval(_eval){}
|
||||
|
||||
private:
|
||||
|
||||
/**
|
||||
* explorer of one individual
|
||||
* @param _src the individual to explore
|
||||
* @param _dest contains new generated individuals
|
||||
*/
|
||||
void explore(MOEOT & _src, eoPop < MOEOT > & _dest)
|
||||
{
|
||||
//if the neighborhood is not empty
|
||||
if(neighborhood.hasNeighbor(_src)){
|
||||
//init the neighborhood
|
||||
neighborhood.init(_src, neighbor);
|
||||
//eval the neighbor
|
||||
cycle(_src, _dest);
|
||||
//repeat all instructions for each neighbor in the neighborhood until a best neighbor is found
|
||||
while (!comparator(_src.objectiveVector(), neighbor.fitness()) && neighborhood.cont(_src)){
|
||||
neighborhood.next(_src, neighbor);
|
||||
cycle(_src, _dest);
|
||||
}
|
||||
//if all neighbors are been visited, fix the source flag to 1 (visited solution)
|
||||
if(!neighborhood.cont(_src))
|
||||
_src.flag(1);
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* subfunction of explore
|
||||
* @param _src the individual to explore
|
||||
* @param _dest contains new generated individuals
|
||||
*/
|
||||
void cycle(MOEOT & _src, eoPop < MOEOT > & _dest){
|
||||
eval(_src, neighbor);
|
||||
if(!comparator(neighbor.fitness(), _src.objectiveVector())){
|
||||
//copy the solution (_src) at the end of the destination (_dest)
|
||||
_dest.push_back(_src);
|
||||
//move the copy
|
||||
neighbor.move(_dest.back());
|
||||
//affect objective vector to the copy
|
||||
_dest.back().objectiveVector(neighbor.fitness());
|
||||
//fix its flag to 0 (unvisited solution)
|
||||
_dest.back().flag(0);
|
||||
_dest.back().fitness(0);
|
||||
}
|
||||
}
|
||||
|
||||
/** Objective Vector Pareto Comparator */
|
||||
moeoParetoObjectiveVectorComparator<ObjectiveVector> comparator;
|
||||
/** neighbor evaluation function */
|
||||
moEval < Neighbor > & eval;
|
||||
|
||||
};
|
||||
|
||||
#endif /*_MOEOFIRSTIMPROVINGNEIGHBORHOODEXPLORER_H_*/
|
||||
112
trunk/moeo/src/explorer/moeoNoDesimprovingNeighborhoodExplorer.h
Normal file
112
trunk/moeo/src/explorer/moeoNoDesimprovingNeighborhoodExplorer.h
Normal file
|
|
@ -0,0 +1,112 @@
|
|||
/*
|
||||
* <moeoNoDesimprovingNeighborhoodExplorer.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef _MOEONODESIMPROVINGNEIGHBORHOODEXPLORER_H
|
||||
#define _MOEONODESIMPROVINGNEIGHBORHOODEXPLORER_H
|
||||
|
||||
#include <explorer/moeoSubNeighborhoodExplorer.h>
|
||||
|
||||
/**
|
||||
* Explorer which explore the neighborhood until a no desimproving neighbor is found.
|
||||
*/
|
||||
template < class Neighbor >
|
||||
class moeoNoDesimprovingNeighborhoodExplorer : public moeoSubNeighborhoodExplorer < Neighbor >
|
||||
{
|
||||
/** Alias for the type */
|
||||
typedef typename Neighbor::EOT MOEOT;
|
||||
/** Alias for the objeciveVector */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
using moeoSubNeighborhoodExplorer<Neighbor>::neighborhood;
|
||||
using moeoSubNeighborhoodExplorer<Neighbor>::neighbor;
|
||||
|
||||
public:
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
* @param _neighborhood a neighborhood
|
||||
* @param _eval a neighbor evaluation function
|
||||
*/
|
||||
moeoNoDesimprovingNeighborhoodExplorer(
|
||||
moNeighborhood<Neighbor>& _neighborhood,
|
||||
moEval < Neighbor > & _eval)
|
||||
: moeoSubNeighborhoodExplorer< Neighbor >(_neighborhood, 0), eval(_eval){}
|
||||
|
||||
private:
|
||||
|
||||
/**
|
||||
* explorer of one individual
|
||||
* @param _src the individual to explore
|
||||
* @param _dest contains new generated individuals
|
||||
*/
|
||||
void explore(MOEOT & _src, eoPop < MOEOT > & _dest)
|
||||
{
|
||||
bool tmp=true;
|
||||
if(neighborhood.hasNeighbor(_src)){
|
||||
neighborhood.init(_src, neighbor);
|
||||
eval(_src,neighbor);
|
||||
if(!comparator(neighbor.fitness(), _src.objectiveVector())){
|
||||
_dest.push_back(_src);
|
||||
neighbor.move(_dest.back());
|
||||
_dest.back().objectiveVector(neighbor.fitness());
|
||||
_dest.back().flag(0);
|
||||
tmp=false;
|
||||
}
|
||||
while (neighborhood.cont(_src) && tmp){
|
||||
neighborhood.next(_src, neighbor);
|
||||
eval(_src,neighbor);
|
||||
if(!comparator(neighbor.fitness(), _src.objectiveVector())){
|
||||
_dest.push_back(_src);
|
||||
neighbor.move(_dest.back());
|
||||
_dest.back().objectiveVector(neighbor.fitness());
|
||||
_dest.back().flag(0);
|
||||
tmp=false;
|
||||
}
|
||||
}
|
||||
if(!neighborhood.cont(_src))
|
||||
_src.flag(1);
|
||||
}
|
||||
}
|
||||
|
||||
/** Objective Vector Pareto Comparator */
|
||||
moeoParetoObjectiveVectorComparator<ObjectiveVector> comparator;
|
||||
/** neighbor evaluation function */
|
||||
moEval < Neighbor > & eval;
|
||||
};
|
||||
|
||||
#endif /*_MOEONODESIMPROVINGNEIGHBORHOODEXPLORER_H_*/
|
||||
60
trunk/moeo/src/explorer/moeoPopNeighborhoodExplorer.h
Executable file
60
trunk/moeo/src/explorer/moeoPopNeighborhoodExplorer.h
Executable file
|
|
@ -0,0 +1,60 @@
|
|||
/*
|
||||
* <moeoPopNeighborhoodExplorer.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef _MOEOPOPNEIGHBORHOODEXPLORER_H
|
||||
#define _MOEOPOPNEIGHBORHOODEXPLORER_H
|
||||
|
||||
#include <eoPop.h>
|
||||
|
||||
/**
|
||||
* Abstract class for multi-objective local search neighborhood exploration
|
||||
*/
|
||||
template < class Neighbor >
|
||||
class moeoPopNeighborhoodExplorer: public eoFunctorBase{
|
||||
|
||||
public:
|
||||
|
||||
typedef typename Neighbor::EOT MOEOT;
|
||||
/**
|
||||
* abstract functor which realize exploration
|
||||
*/
|
||||
virtual void operator()(eoPop<MOEOT> &, std::vector <unsigned int>, eoPop<MOEOT> &) = 0;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEONEIGHBORHOODEXPLORER_H_*/
|
||||
124
trunk/moeo/src/explorer/moeoSimpleSubNeighborhoodExplorer.h
Normal file
124
trunk/moeo/src/explorer/moeoSimpleSubNeighborhoodExplorer.h
Normal file
|
|
@ -0,0 +1,124 @@
|
|||
/*
|
||||
* <moeoSubNeighborhoodExplorer.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef _MOEOSIMPLESUBNEIGHBORHOODEXPLORER_H
|
||||
#define _MOEOSIMPLESUBNEIGHBORHOODEXPLORER_H
|
||||
|
||||
#include <explorer/moeoSubNeighborhoodExplorer.h>
|
||||
|
||||
/**
|
||||
* Explorer which explore a part of the neighborhood
|
||||
*/
|
||||
template < class Neighbor >
|
||||
class moeoSimpleSubNeighborhoodExplorer : public moeoSubNeighborhoodExplorer < Neighbor >
|
||||
{
|
||||
/** Alias for the type */
|
||||
typedef typename Neighbor::EOT MOEOT;
|
||||
/** Alias for the objeciveVector */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
using moeoSubNeighborhoodExplorer<Neighbor>::neighborhood;
|
||||
using moeoSubNeighborhoodExplorer<Neighbor>::neighbor;
|
||||
using moeoSubNeighborhoodExplorer<Neighbor>::number;
|
||||
|
||||
public:
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
* @param _neighborhood a neighborhood
|
||||
* @param _number number of neighbor to explore
|
||||
* @param _eval a neighbor evaluation function
|
||||
*/
|
||||
moeoSimpleSubNeighborhoodExplorer(
|
||||
moNeighborhood<Neighbor>& _neighborhood,
|
||||
unsigned int _number,
|
||||
moEval < Neighbor > & _eval)
|
||||
: moeoSubNeighborhoodExplorer<Neighbor>(_neighborhood, _number), eval(_eval){}
|
||||
|
||||
private:
|
||||
|
||||
/**
|
||||
* explorer of one individual
|
||||
* @param _src the individual to explore
|
||||
* @param _dest contains new generated individuals
|
||||
*/
|
||||
void explore(MOEOT & _src, eoPop < MOEOT > & _dest)
|
||||
{
|
||||
unsigned int tmp=number;
|
||||
//if the neighborhood is not empty
|
||||
if(neighborhood.hasNeighbor(_src) && tmp>0){
|
||||
//init the neighborhood
|
||||
neighborhood.init(_src, neighbor);
|
||||
//eval the neighbor
|
||||
cycle(_src, _dest);
|
||||
tmp--;
|
||||
//repeat all instructions for each neighbor in the neighborhood until a best neighbor is found
|
||||
while (neighborhood.cont(_src) && tmp>0){
|
||||
neighborhood.next(_src, neighbor);
|
||||
cycle(_src, _dest);
|
||||
tmp--;
|
||||
}
|
||||
//if all neighbors are been visited, fix the source flag to 1 (visited solution)
|
||||
if(!neighborhood.cont(_src))
|
||||
_src.flag(1);
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* subfunction of explore
|
||||
* @param _src the individual to explore
|
||||
* @param _dest contains new generated individuals
|
||||
*/
|
||||
void cycle(MOEOT & _src, eoPop < MOEOT > & _dest){
|
||||
eval(_src, neighbor);
|
||||
//copy the solution (_src) at the end of the destination (_dest)
|
||||
_dest.push_back(_src);
|
||||
//move the copy
|
||||
neighbor.move(_dest.back());
|
||||
//affect objective vector to the copy
|
||||
_dest.back().objectiveVector(neighbor.fitness());
|
||||
//fix its flag to 0 (unvisited solution)
|
||||
_dest.back().flag(0);
|
||||
}
|
||||
|
||||
/** Incremental evaluation of a neighbor */
|
||||
moEval < Neighbor > & eval;
|
||||
|
||||
};
|
||||
|
||||
#endif /*_MOEOSIMPLESUBNEIGHBORHOODEXPLORER_H_*/
|
||||
101
trunk/moeo/src/explorer/moeoSubNeighborhoodExplorer.h
Normal file
101
trunk/moeo/src/explorer/moeoSubNeighborhoodExplorer.h
Normal file
|
|
@ -0,0 +1,101 @@
|
|||
/*
|
||||
* <moeoSubNeighborhoodExplorer.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef _MOEOSUBNEIGHBORHOODEXPLORER_H
|
||||
#define _MOEOSUBNEIGHBORHOODEXPLORER_H
|
||||
|
||||
#include <eoPop.h>
|
||||
#include <neighborhood/moNeighbor.h>
|
||||
#include <neighborhood/moNeighborhood.h>
|
||||
#include <explorer/moeoPopNeighborhoodExplorer.h>
|
||||
|
||||
/**
|
||||
* Explorer which explore a part of the neighborhood
|
||||
*/
|
||||
template < class Neighbor >
|
||||
class moeoSubNeighborhoodExplorer : public moeoPopNeighborhoodExplorer < Neighbor >
|
||||
{
|
||||
/** Alias for the type */
|
||||
typedef typename Neighbor::EOT MOEOT;
|
||||
/** Alias for the objeciveVector */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
public:
|
||||
|
||||
/**
|
||||
* Constructor
|
||||
* @param _neighborhood a neighborhood
|
||||
* @param _number the number of neighbor to explore
|
||||
*/
|
||||
moeoSubNeighborhoodExplorer(
|
||||
moNeighborhood<Neighbor>& _neighborhood,
|
||||
unsigned int _number)
|
||||
: neighborhood(_neighborhood), number(_number){}
|
||||
|
||||
/**
|
||||
* functor to explore the neighborhood
|
||||
* @param _src the population to explore
|
||||
* @param _select contains index of individuals from the population to explore
|
||||
* @param _dest contains new generated individuals
|
||||
*/
|
||||
void operator()(eoPop < MOEOT > & _src, std::vector <unsigned int> _select, eoPop < MOEOT > & _dest)
|
||||
{
|
||||
for(unsigned int i=0; i<_select.size(); i++)
|
||||
explore(_src[_select[i]], _dest);
|
||||
}
|
||||
|
||||
protected:
|
||||
|
||||
/**
|
||||
* explorer of one individual
|
||||
* @param _src the individual to explore
|
||||
* @param _dest contains new generated individuals
|
||||
*/
|
||||
virtual void explore(MOEOT & _src, eoPop < MOEOT > & _dest) = 0;
|
||||
|
||||
/** Neighbor */
|
||||
Neighbor neighbor;
|
||||
/** Neighborhood */
|
||||
moNeighborhood<Neighbor> & neighborhood;
|
||||
|
||||
/** number of neighbor to explore for each selected individual*/
|
||||
unsigned int number;
|
||||
|
||||
};
|
||||
|
||||
#endif /*_MOEOSUBNEIGHBORHOODEXPLORER_H_*/
|
||||
129
trunk/moeo/src/fitness/moeoAggregationFitnessAssignment.h
Normal file
129
trunk/moeo/src/fitness/moeoAggregationFitnessAssignment.h
Normal file
|
|
@ -0,0 +1,129 @@
|
|||
/*
|
||||
* <moeoAggregationFitnessAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Lille-Nord Europe, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* François Legillon
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
// moeoAggregationFitnessAssignment.h
|
||||
//-----------------------------------------------------------------------------
|
||||
#ifndef MOEOAGGREGATIONFITNESSASSIGNMENT_H_
|
||||
#define MOEOAGGREGATIONFITNESSASSIGNMENT_H_
|
||||
|
||||
#include <eoPop.h>
|
||||
#include <eoEvalFunc.h>
|
||||
#include <fitness/moeoSingleObjectivization.h>
|
||||
|
||||
/*
|
||||
* Fitness assignment scheme which use weight for each objective
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoAggregationFitnessAssignment : public moeoSingleObjectivization < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/** the objective vector type of the solutions */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
typedef typename MOEOT::Fitness Fitness;
|
||||
|
||||
/**
|
||||
* Default ctor
|
||||
* @param _weight vectors contains all weights.
|
||||
* @param _eval a eval function, to revalidate the objectiveVector if needed
|
||||
*/
|
||||
moeoAggregationFitnessAssignment(std::vector<double> & _weight,eoEvalFunc<MOEOT> &_eval) : weight(_weight),eval(_eval){}
|
||||
|
||||
/**
|
||||
* Ctor with a dummy evaluation function
|
||||
* @param _weight vectors contains all weights.
|
||||
*/
|
||||
moeoAggregationFitnessAssignment(std::vector<double> & _weight) : weight(_weight),eval(defaultEval){}
|
||||
|
||||
/**
|
||||
* Sets the fitness values for _moeot
|
||||
* @param _moeot the MOEOT
|
||||
*/
|
||||
virtual void operator()(MOEOT & _moeot){
|
||||
if (_moeot.invalidObjectiveVector())
|
||||
eval(_moeot);
|
||||
_moeot.fitness(operator()(_moeot.objectiveVector()));
|
||||
}
|
||||
|
||||
/**
|
||||
* function which calculate the fitness from an objectiveVector (which has troi be valid.)
|
||||
* @param _mo an valid objectiveVector
|
||||
* @return the fitness value of _mo
|
||||
*/
|
||||
virtual Fitness operator()(const typename MOEOT::ObjectiveVector & _mo){
|
||||
unsigned int dim=_mo.nObjectives();
|
||||
Fitness res=0;
|
||||
if (dim>weight.size()){
|
||||
std::cout<<"moeoAggregationFitnessAssignmentFitness: Error -> given weight dimension is smaller than MOEOTs"<<std::endl;
|
||||
return res;
|
||||
}
|
||||
for(unsigned int l=0; l<dim; l++){
|
||||
if (_mo.minimizing(l))
|
||||
res-=(_mo[l]) * weight[l];
|
||||
else
|
||||
res+=(_mo[l]) * weight[l];
|
||||
}
|
||||
return res;
|
||||
}
|
||||
|
||||
/**
|
||||
* Sets the fitness values for every solution contained in the population _pop (and in the archive)
|
||||
* @param _pop the population
|
||||
*/
|
||||
virtual void operator()(eoPop < MOEOT > & _pop){
|
||||
for (unsigned int k=0; k < _pop.size(); k++)
|
||||
operator()(_pop[k]);
|
||||
}
|
||||
|
||||
/**
|
||||
* Warning: no yet implemented: Updates the fitness values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec){}
|
||||
|
||||
private:
|
||||
|
||||
class DummyEval: public eoEvalFunc<MOEOT>{
|
||||
void operator()(MOEOT &moeo){}
|
||||
}defaultEval;
|
||||
|
||||
//the vector of weight
|
||||
std::vector<double>& weight;
|
||||
eoEvalFunc<MOEOT>& eval;
|
||||
|
||||
};
|
||||
#endif /*MOEOAGGREGATIONFITNESSASSIGNMENT_H_*/
|
||||
|
|
@ -0,0 +1,65 @@
|
|||
/*
|
||||
* <moeoBinaryIndicatorBasedFitnessAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOBINARYINDICATORBASEDFITNESSASSIGNMENT_H_
|
||||
#define MOEOBINARYINDICATORBASEDFITNESSASSIGNMENT_H_
|
||||
|
||||
#include <fitness/moeoIndicatorBasedFitnessAssignment.h>
|
||||
|
||||
/**
|
||||
* moeoIndicatorBasedFitnessAssignment for binary indicators.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoBinaryIndicatorBasedFitnessAssignment : public moeoIndicatorBasedFitnessAssignment < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/** The type for objective vector */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Updates the fitness values of the whole population _pop by taking the new objective vector _objVec into account
|
||||
* and returns the fitness value of _objVec.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
*/
|
||||
virtual double updateByAdding(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec) = 0;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOINDICATORBASEDFITNESSASSIGNMENT_H_*/
|
||||
171
trunk/moeo/src/fitness/moeoConstraintFitnessAssignment.h
Normal file
171
trunk/moeo/src/fitness/moeoConstraintFitnessAssignment.h
Normal file
|
|
@ -0,0 +1,171 @@
|
|||
/*
|
||||
* <moeoConstraintFitnessAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Lille-Nord Europe, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* François Legillon
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
// moeoConstraintFitnessAssignment.h
|
||||
//-----------------------------------------------------------------------------
|
||||
#ifndef MOEOCONSTRAINTFITNESSASSIGNMENT_H_
|
||||
#define MOEOCONSTRAINTFITNESSASSIGNMENT_H_
|
||||
|
||||
#include <eoPop.h>
|
||||
#include <fitness/moeoSingleObjectivization.h>
|
||||
#include <utils/moeoObjectiveVectorNormalizer.h>
|
||||
|
||||
/*
|
||||
* Fitness assignment scheme which give a penalty if MOEOT does not respect constraints
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoConstraintFitnessAssignment : public moeoSingleObjectivization < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/** the objective vector type of the solutions */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
/** the fitness type of the solutions */
|
||||
typedef typename MOEOT::Fitness Fitness;
|
||||
/** the type of the solutions */
|
||||
typedef typename ObjectiveVector::Type Type;
|
||||
|
||||
/**
|
||||
* Default ctor
|
||||
* @param _weight vectors contains all weights to apply for not respecting the contraint in each dimension.
|
||||
* @param _constraint vector containing the constraints, normalizer is applied to it
|
||||
* @param _to_optimize dimension in which we ignore the constraint
|
||||
* @param _normalizer normalizer to apply to each objective
|
||||
*/
|
||||
moeoConstraintFitnessAssignment(std::vector<double> & _weight, ObjectiveVector &_constraint, int _to_optimize, moeoObjectiveVectorNormalizer<MOEOT> &_normalizer, eoEvalFunc<MOEOT> &_eval) : weight(_weight),constraint(_constraint),to_optimize(_to_optimize),normalizer(_normalizer),eval(_eval),to_eval(true){}
|
||||
|
||||
/**
|
||||
* Ctor with a dummy eval
|
||||
* @param _weight vectors contains all weights to apply for not respecting the contraint in each dimension.
|
||||
* @param _constraint vector containing the constraints, normalizer is applied to it
|
||||
* @param _to_optimize dimension in which we ignore the constraint
|
||||
* @param _normalizer normalizer to apply to each objective
|
||||
*/
|
||||
moeoConstraintFitnessAssignment(std::vector<double> & _weight, ObjectiveVector &_constraint, int _to_optimize, moeoObjectiveVectorNormalizer<MOEOT> &_normalizer) : weight(_weight), constraint(_constraint), to_optimize(_to_optimize), normalizer(_normalizer), eval(defaultEval), to_eval(false){}
|
||||
|
||||
/**
|
||||
* Sets the fitness values for every solution contained in the population _pop (and in the archive)
|
||||
* @param _mo the MOEOT
|
||||
*/
|
||||
void operator()(MOEOT & _mo){
|
||||
if (to_eval && _mo.invalidObjectiveVector())
|
||||
eval(_mo);
|
||||
_mo.fitness(operator()(_mo.objectiveVector()));
|
||||
}
|
||||
|
||||
/**
|
||||
* Calculate a fitness from a valid objectiveVector
|
||||
* @param _mo a valid objectiveVector
|
||||
* @return the fitness of _mo
|
||||
*/
|
||||
Fitness operator()(const typename MOEOT::ObjectiveVector & _mo){
|
||||
unsigned int dim=_mo.nObjectives();
|
||||
Fitness res=0;
|
||||
if (dim>weight.size()){
|
||||
std::cout<<"moeoAggregationFitnessAssignmentFitness: ouch, given weight dimension is smaller than MOEOTs"<<std::endl;
|
||||
}
|
||||
else{
|
||||
for(unsigned int l=0; l<dim; l++){
|
||||
if ((int)l==to_optimize)
|
||||
if (_mo.minimizing(l))
|
||||
res-=(normalizer(_mo)[l]) * weight[l];
|
||||
else
|
||||
res+=(normalizer(_mo)[l]) * weight[l];
|
||||
else{
|
||||
if(_mo.minimizing(l)){
|
||||
if (normalizer(_mo)[l]>normalizer(constraint)[l])
|
||||
res-=(normalizer(_mo)[l]-normalizer(constraint)[l])*weight[l];
|
||||
}
|
||||
else{
|
||||
if (normalizer(_mo)[l]<normalizer(constraint)[l])
|
||||
//negative so we add it instead of removing it
|
||||
res+=(normalizer(_mo)[l]-normalizer(constraint)[l])*weight[l];
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
return res;
|
||||
}
|
||||
|
||||
/**
|
||||
* Sets the fitness values for every solution contained in the population _pop (and in the archive)
|
||||
* @param _pop the population
|
||||
*/
|
||||
void operator()(eoPop < MOEOT > & _pop)
|
||||
{
|
||||
for(unsigned int k=0; k<_pop.size(); k++)
|
||||
operator()(_pop[k]);
|
||||
}
|
||||
|
||||
/**
|
||||
* Warning: no yet implemented: Updates the fitness values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec)
|
||||
{
|
||||
//std::cout << "WARNING : updateByDeleting not implemented in moeoAssignmentFitnessAssignment" << std::endl;
|
||||
}
|
||||
|
||||
private:
|
||||
|
||||
//dummy evaluation function
|
||||
class DummyEval: public eoEvalFunc<MOEOT>{
|
||||
void operator()(MOEOT &moeo){
|
||||
}
|
||||
} defaultEval;
|
||||
|
||||
//the vector of weight
|
||||
std::vector<double> weight;
|
||||
|
||||
//the vector of constraints
|
||||
ObjectiveVector constraint;
|
||||
|
||||
//index of the objective to optimize
|
||||
int to_optimize;
|
||||
|
||||
//the normalizer
|
||||
moeoObjectiveVectorNormalizer<MOEOT>& normalizer;
|
||||
|
||||
//the evaluation function
|
||||
eoEvalFunc<MOEOT> &eval;
|
||||
|
||||
//true if the evaluation has to be done
|
||||
bool to_eval;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOAGGREGATIONFITNESSASSIGNMENT_H_*/
|
||||
50
trunk/moeo/src/fitness/moeoCriterionBasedFitnessAssignment.h
Normal file
50
trunk/moeo/src/fitness/moeoCriterionBasedFitnessAssignment.h
Normal file
|
|
@ -0,0 +1,50 @@
|
|||
/*
|
||||
* <moeoCriterionBasedFitnessAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOCRITERIONBASEDFITNESSASSIGNMENT_H_
|
||||
#define MOEOCRITERIONBASEDFITNESSASSIGNMENT_H_
|
||||
|
||||
#include <fitness/moeoFitnessAssignment.h>
|
||||
|
||||
/**
|
||||
* moeoCriterionBasedFitnessAssignment is a moeoFitnessAssignment for criterion-based strategies.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoCriterionBasedFitnessAssignment : public moeoFitnessAssignment < MOEOT >
|
||||
{};
|
||||
|
||||
#endif /*MOEOCRITERIONBASEDFITNESSASSIGNMENT_H_*/
|
||||
50
trunk/moeo/src/fitness/moeoDominanceBasedFitnessAssignment.h
Normal file
50
trunk/moeo/src/fitness/moeoDominanceBasedFitnessAssignment.h
Normal file
|
|
@ -0,0 +1,50 @@
|
|||
/*
|
||||
* <moeoDominanceBasedFitnessAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEODOMINANCEBASEDFITNESSASSIGNMENT_H_
|
||||
#define MOEODOMINANCEBASEDFITNESSASSIGNMENT_H_
|
||||
|
||||
#include <fitness/moeoFitnessAssignment.h>
|
||||
|
||||
/**
|
||||
* moeoDominanceBasedFitnessAssignment is a moeoFitnessAssignment for dominance-based strategies.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoDominanceBasedFitnessAssignment : public moeoFitnessAssignment < MOEOT >
|
||||
{};
|
||||
|
||||
#endif /*MOEODOMINANCEBASEDFITNESSASSIGNMENT_H_*/
|
||||
143
trunk/moeo/src/fitness/moeoDominanceCountFitnessAssignment.h
Normal file
143
trunk/moeo/src/fitness/moeoDominanceCountFitnessAssignment.h
Normal file
|
|
@ -0,0 +1,143 @@
|
|||
/*
|
||||
* <moeoDominanceCountFitnessAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Lille-Nord Europe, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jeremie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
// moeoDominanceCountFitnessAssignment.h
|
||||
//-----------------------------------------------------------------------------
|
||||
#ifndef MOEODOMINANCECOUNTFITNESSASSIGNMENT_H_
|
||||
#define MOEODOMINANCECOUNTFITNESSASSIGNMENT_H_
|
||||
|
||||
#include <vector>
|
||||
#include <eoPop.h>
|
||||
#include <archive/moeoArchive.h>
|
||||
#include <archive/moeoUnboundedArchive.h>
|
||||
#include <comparator/moeoObjectiveVectorComparator.h>
|
||||
#include <comparator/moeoParetoObjectiveVectorComparator.h>
|
||||
#include <fitness/moeoDominanceBasedFitnessAssignment.h>
|
||||
#include <utils/moeoDominanceMatrix.h>
|
||||
|
||||
/**
|
||||
* Fitness assignment sheme that computes how many solutions does each solution dominate.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoDominanceCountFitnessAssignment : public moeoDominanceBasedFitnessAssignment < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
|
||||
/** the objective vector type of the solutions */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Default ctor
|
||||
* @param _nocopy boolean to move away clone individuals (default = false)
|
||||
*/
|
||||
moeoDominanceCountFitnessAssignment(bool _nocopy=false) : comparator(paretoComparator), archive(defaultArchive), matrix(_nocopy)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own archive
|
||||
* @param _archive an archive to be included in the fitness assignment process
|
||||
* @param _nocopy boolean to penalize clone individuals (default = false)
|
||||
*/
|
||||
moeoDominanceCountFitnessAssignment(moeoArchive < MOEOT > & _archive, bool _nocopy=false) : comparator(paretoComparator), archive(_archive), matrix(_nocopy)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own way to compare objective vectors
|
||||
* @param _comparator the functor used to compare objective vectors
|
||||
* @param _nocopy boolean to penalize clone individuals (default = false)
|
||||
*/
|
||||
moeoDominanceCountFitnessAssignment(moeoObjectiveVectorComparator < ObjectiveVector > & _comparator, bool _nocopy=false) : comparator(_comparator), archive(defaultArchive), matrix(_comparator, _nocopy)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own archive and your own way to compare objective vectors
|
||||
* @param _comparator the functor used to compare objective vectors
|
||||
* @param _archive an archive to be included in the fitness assignment process
|
||||
* @param _nocopy boolean to penalize clone individuals (default = false)
|
||||
*/
|
||||
moeoDominanceCountFitnessAssignment(moeoObjectiveVectorComparator < ObjectiveVector > & _comparator, moeoArchive < MOEOT > & _archive, bool _nocopy=false) : comparator(_comparator), archive(_archive), matrix(_comparator, _nocopy)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the fitness values for every solution contained in the population _pop (and in the archive)
|
||||
* @param _pop the population
|
||||
*/
|
||||
void operator()(eoPop < MOEOT > & _pop)
|
||||
{
|
||||
unsigned int j= _pop.size();
|
||||
unsigned int i= archive.size();
|
||||
matrix(archive,_pop);
|
||||
for (unsigned int k=0; k<i; k++)
|
||||
archive[k].fitness(matrix.count(k));
|
||||
for (unsigned int k=i; k<i+j; k++)
|
||||
_pop[k-i].fitness(matrix.count(k));
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Updates the fitness values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec)
|
||||
{
|
||||
std::cout << "WARNING : updateByDeleting not implemented in moeoDominanceCountFitnessAssignment" << std::endl;
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/** Functor to compare two objective vectors */
|
||||
moeoObjectiveVectorComparator < ObjectiveVector > & comparator;
|
||||
/** Functor to compare two objective vectors according to Pareto dominance relation */
|
||||
moeoParetoObjectiveVectorComparator < ObjectiveVector > paretoComparator;
|
||||
/** Archive to be included in the fitness assignment process */
|
||||
moeoArchive < MOEOT > & archive;
|
||||
/** Default archive */
|
||||
moeoUnboundedArchive < MOEOT > defaultArchive;
|
||||
/** Dominance Matrix */
|
||||
moeoDominanceMatrix < MOEOT > matrix;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEODOMINANCECOUNTFITNESSASSIGNMENT_H_*/
|
||||
|
|
@ -0,0 +1,162 @@
|
|||
/*
|
||||
* <moeoDominanceCountRankingFitnessAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Lille-Nord Europe, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jeremie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
// moeoDominanceCountRankingFitnessAssignment.h
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEODOMINANCECOUNTRANKINGFITNESSASSIGNMENT_H_
|
||||
#define MOEODOMINANCECOUNTRANKINGFITNESSASSIGNMENT_H_
|
||||
|
||||
#include <vector>
|
||||
#include <eoPop.h>
|
||||
#include <archive/moeoArchive.h>
|
||||
#include <archive/moeoUnboundedArchive.h>
|
||||
#include <comparator/moeoObjectiveVectorComparator.h>
|
||||
#include <comparator/moeoParetoObjectiveVectorComparator.h>
|
||||
#include <fitness/moeoDominanceBasedFitnessAssignment.h>
|
||||
#include <utils/moeoDominanceMatrix.h>
|
||||
|
||||
/**
|
||||
* Fitness assignment sheme that sum-up the ranks of all solutions dominated by each solution.
|
||||
* This strategy is used, for instance, in SPEA2.
|
||||
* E. Zitzler, M. Laumanns, and L. Thiele. SPEA2: Improving the Strength Pareto Evolutionary Algorithm. Technical Report 103,
|
||||
* Computer Engineering and Networks Laboratory (TIK), ETH Zurich, Zurich, Switzerland, 2001.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoDominanceCountRankingFitnessAssignment : public moeoDominanceBasedFitnessAssignment < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
|
||||
/** the objective vector type of the solutions */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Default ctor
|
||||
* @param _nocopy boolean to move away copies
|
||||
*/
|
||||
moeoDominanceCountRankingFitnessAssignment(bool _nocopy=true) : comparator(paretoComparator), archive(defaultArchive), matrix(_nocopy)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own archive
|
||||
* @param _archive the archive used
|
||||
* @param _nocopy boolean to move away copies
|
||||
*/
|
||||
moeoDominanceCountRankingFitnessAssignment(moeoArchive < MOEOT > & _archive, bool _nocopy=true) : comparator(paretoComparator), archive(_archive), matrix(_nocopy)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own way to compare objective vectors
|
||||
* @param _comparator the functor used to compare objective vectors
|
||||
* @param _nocopy boolean to move away copies
|
||||
*/
|
||||
moeoDominanceCountRankingFitnessAssignment(moeoObjectiveVectorComparator < ObjectiveVector > & _comparator, bool _nocopy=true) : comparator(_comparator), archive(defaultArchive), matrix(_comparator, _nocopy)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own archive and your own way to compare objective vectors
|
||||
* @param _comparator the functor used to compare objective vectors
|
||||
* @param _archive the archive used
|
||||
* @param _nocopy boolean to move away copies
|
||||
*/
|
||||
moeoDominanceCountRankingFitnessAssignment(moeoObjectiveVectorComparator < ObjectiveVector > & _comparator, moeoArchive < MOEOT > & _archive, bool _nocopy=true) : comparator(_comparator), archive(_archive), matrix(_comparator, _nocopy)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the fitness values for every solution contained in the population _pop (and in the archive)
|
||||
* @param _pop the population
|
||||
*/
|
||||
void operator()(eoPop < MOEOT > & _pop)
|
||||
{
|
||||
unsigned int i= _pop.size();
|
||||
unsigned int j= archive.size();
|
||||
matrix(archive,_pop);
|
||||
for (unsigned int k=0; k<j; k++)
|
||||
archive[k].fitness(countRanking(k));
|
||||
for (unsigned int k=j; k<i+j; k++)
|
||||
_pop[k-j].fitness(countRanking(k));
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Updates the fitness values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec)
|
||||
{
|
||||
std::cout << "WARNING : updateByDeleting not implemented in moeoDominanceCountRankingFitnessAssignment" << std::endl;
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/** Functor to compare two objective vectors */
|
||||
moeoObjectiveVectorComparator < ObjectiveVector > & comparator;
|
||||
/** Functor to compare two objective vectors according to Pareto dominance relation */
|
||||
moeoParetoObjectiveVectorComparator < ObjectiveVector > paretoComparator;
|
||||
/** Archive to be included in the fitness assignment process */
|
||||
moeoArchive < MOEOT > & archive;
|
||||
/** Default archive */
|
||||
moeoUnboundedArchive < MOEOT > defaultArchive;
|
||||
/** Dominance Matrix */
|
||||
moeoDominanceMatrix <MOEOT> matrix;
|
||||
|
||||
|
||||
/**
|
||||
* @param _i index of the column
|
||||
*/
|
||||
double countRanking(unsigned int _i)
|
||||
{
|
||||
double res=0;
|
||||
for (unsigned int k=0; k<matrix.size(); k++)
|
||||
{
|
||||
if (matrix[k][_i])
|
||||
res+=matrix.count(k);
|
||||
}
|
||||
return -res;
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEODOMINANCECOUNTRANKINGFITNESSASSIGNMENT_H_*/
|
||||
265
trunk/moeo/src/fitness/moeoDominanceDepthFitnessAssignment.h
Normal file
265
trunk/moeo/src/fitness/moeoDominanceDepthFitnessAssignment.h
Normal file
|
|
@ -0,0 +1,265 @@
|
|||
/*
|
||||
* <moeoDominanceDepthFitnessAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEODOMINANCEDEPTHFITNESSASSIGNMENT_H_
|
||||
#define MOEODOMINANCEDEPTHFITNESSASSIGNMENT_H_
|
||||
|
||||
#include <vector>
|
||||
#include <eoPop.h>
|
||||
#include <comparator/moeoObjectiveObjectiveVectorComparator.h>
|
||||
#include <comparator/moeoObjectiveVectorComparator.h>
|
||||
#include <comparator/moeoParetoObjectiveVectorComparator.h>
|
||||
#include <fitness/moeoDominanceBasedFitnessAssignment.h>
|
||||
|
||||
|
||||
/**
|
||||
* Fitness assignment sheme based on Pareto-dominance count proposed in:
|
||||
* N. Srinivas, K. Deb, "Multiobjective Optimization Using Nondominated Sorting in Genetic Algorithms", Evolutionary Computation vol. 2, no. 3, pp. 221-248 (1994)
|
||||
* and in:
|
||||
* K. Deb, A. Pratap, S. Agarwal, T. Meyarivan, "A Fast and Elitist Multi-Objective Genetic Algorithm: NSGA-II", IEEE Transactions on Evolutionary Computation, vol. 6, no. 2 (2002).
|
||||
* This strategy is, for instance, used in NSGA and NSGA-II.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoDominanceDepthFitnessAssignment : public moeoDominanceBasedFitnessAssignment < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/** the objective vector type of the solutions */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Default ctor
|
||||
*/
|
||||
moeoDominanceDepthFitnessAssignment() : comparator(paretoComparator)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own way to compare objective vectors
|
||||
* @param _comparator the functor used to compare objective vectors
|
||||
*/
|
||||
moeoDominanceDepthFitnessAssignment(moeoObjectiveVectorComparator < ObjectiveVector > & _comparator) : comparator(_comparator)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the fitness values for every solution contained in the population _pop
|
||||
* @param _pop the population
|
||||
*/
|
||||
void operator()(eoPop < MOEOT > & _pop)
|
||||
{
|
||||
// number of objectives for the problem under consideration
|
||||
unsigned int nObjectives = MOEOT::ObjectiveVector::nObjectives();
|
||||
if (nObjectives == 1)
|
||||
{
|
||||
// one objective
|
||||
oneObjective(_pop);
|
||||
}
|
||||
else if (nObjectives == 2)
|
||||
{
|
||||
// two objectives (the two objectives function is still to implement)
|
||||
mObjectives(_pop);
|
||||
}
|
||||
else if (nObjectives > 2)
|
||||
{
|
||||
// more than two objectives
|
||||
mObjectives(_pop);
|
||||
}
|
||||
else
|
||||
{
|
||||
// problem with the number of objectives
|
||||
throw std::runtime_error("Problem with the number of objectives in moeoDominanceDepthFitnessAssignment");
|
||||
}
|
||||
// a higher fitness is better, so the values need to be inverted
|
||||
double max = _pop[0].fitness();
|
||||
for (unsigned int i=1 ; i<_pop.size() ; i++)
|
||||
{
|
||||
max = std::max(max, _pop[i].fitness());
|
||||
}
|
||||
for (unsigned int i=0 ; i<_pop.size() ; i++)
|
||||
{
|
||||
_pop[i].fitness(max - _pop[i].fitness());
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Updates the fitness values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec)
|
||||
{
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
// if _pop[i] is dominated by _objVec
|
||||
if ( comparator(_pop[i].objectiveVector(), _objVec) )
|
||||
{
|
||||
_pop[i].fitness(_pop[i].fitness()+1);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/** Functor to compare two objective vectors */
|
||||
moeoObjectiveVectorComparator < ObjectiveVector > & comparator;
|
||||
/** Functor to compare two objective vectors according to Pareto dominance relation */
|
||||
moeoParetoObjectiveVectorComparator < ObjectiveVector > paretoComparator;
|
||||
/** Functor allowing to compare two solutions according to their first objective value, then their second, and so on. */
|
||||
class ObjectiveComparator : public moeoComparator < MOEOT >
|
||||
{
|
||||
public:
|
||||
/**
|
||||
* Returns true if _moeo1 < _moeo2 on the first objective, then on the second, and so on
|
||||
* @param _moeo1 the first solution
|
||||
* @param _moeo2 the second solution
|
||||
*/
|
||||
const bool operator()(const MOEOT & _moeo1, const MOEOT & _moeo2)
|
||||
{
|
||||
return cmp(_moeo1.objectiveVector(), _moeo2.objectiveVector());
|
||||
}
|
||||
private:
|
||||
/** the corresponding comparator for objective vectors */
|
||||
moeoObjectiveObjectiveVectorComparator < ObjectiveVector > cmp;
|
||||
}
|
||||
objComparator;
|
||||
|
||||
|
||||
/**
|
||||
* Sets the fitness values for mono-objective problems
|
||||
* @param _pop the population
|
||||
*/
|
||||
void oneObjective (eoPop < MOEOT > & _pop)
|
||||
{
|
||||
// sorts the population in the ascending order
|
||||
std::sort(_pop.begin(), _pop.end(), objComparator);
|
||||
// assign fitness values
|
||||
unsigned int rank = 1;
|
||||
_pop[_pop.size()-1].fitness(rank);
|
||||
for (int i=_pop.size()-2; i>=0; i--)
|
||||
{
|
||||
if (_pop[i].objectiveVector() != _pop[i+1].objectiveVector())
|
||||
{
|
||||
rank++;
|
||||
}
|
||||
_pop[i].fitness(rank);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the fitness values for bi-objective problems with a complexity of O(n log n), where n stands for the population size
|
||||
* @param _pop the population
|
||||
*/
|
||||
void twoObjectives (eoPop < MOEOT > & _pop)
|
||||
{
|
||||
//... TO DO !
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the fitness values for problems with more than two objectives with a complexity of O(n² log n), where n stands for the population size
|
||||
* @param _pop the population
|
||||
*/
|
||||
void mObjectives (eoPop < MOEOT > & _pop)
|
||||
{
|
||||
// S[i] = indexes of the individuals dominated by _pop[i]
|
||||
std::vector < std::vector<unsigned int> > S(_pop.size());
|
||||
// n[i] = number of individuals that dominate the individual _pop[i]
|
||||
std::vector < unsigned int > n(_pop.size(), 0);
|
||||
// fronts: F[i] = indexes of the individuals contained in the ith front
|
||||
std::vector < std::vector<unsigned int> > F(_pop.size()+2);
|
||||
// used to store the number of the first front
|
||||
F[1].reserve(_pop.size());
|
||||
for (unsigned int p=0; p<_pop.size(); p++)
|
||||
{
|
||||
for (unsigned int q=0; q<_pop.size(); q++)
|
||||
{
|
||||
// if q is dominated by p
|
||||
if ( comparator(_pop[q].objectiveVector(), _pop[p].objectiveVector()) )
|
||||
{
|
||||
// add q to the set of solutions dominated by p
|
||||
S[p].push_back(q);
|
||||
}
|
||||
// if p is dominated by q
|
||||
else if ( comparator(_pop[p].objectiveVector(), _pop[q].objectiveVector()) )
|
||||
{
|
||||
// increment the domination counter of p
|
||||
n[p]++;
|
||||
}
|
||||
}
|
||||
// if no individual dominates p
|
||||
if (n[p] == 0)
|
||||
{
|
||||
// p belongs to the first front
|
||||
_pop[p].fitness(1);
|
||||
F[1].push_back(p);
|
||||
}
|
||||
}
|
||||
// front counter
|
||||
unsigned int counter=1;
|
||||
unsigned int p,q;
|
||||
while (! F[counter].empty())
|
||||
{
|
||||
// used to store the number of the next front
|
||||
F[counter+1].reserve(_pop.size());
|
||||
for (unsigned int i=0; i<F[counter].size(); i++)
|
||||
{
|
||||
p = F[counter][i];
|
||||
for (unsigned int j=0; j<S[p].size(); j++)
|
||||
{
|
||||
q = S[p][j];
|
||||
n[q]--;
|
||||
// if no individual dominates q anymore
|
||||
if (n[q] == 0)
|
||||
{
|
||||
// q belongs to the next front
|
||||
_pop[q].fitness(counter+1);
|
||||
F[counter+1].push_back(q);
|
||||
}
|
||||
}
|
||||
}
|
||||
counter++;
|
||||
}
|
||||
}
|
||||
|
||||
} ;
|
||||
|
||||
#endif /*MOEODOMINANCEDEPTHFITNESSASSIGNMENT_H_*/
|
||||
149
trunk/moeo/src/fitness/moeoDominanceRankFitnessAssignment.h
Normal file
149
trunk/moeo/src/fitness/moeoDominanceRankFitnessAssignment.h
Normal file
|
|
@ -0,0 +1,149 @@
|
|||
/*
|
||||
* <moeoDominanceRankFitnessAssignment.cpp>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Lille-Nord Europe, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jeremie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
// moeoDominanceRankFitnessAssignment.cpp
|
||||
//-----------------------------------------------------------------------------
|
||||
#ifndef MOEODOMINANCERANKFITNESSASSIGNEMENT_H_
|
||||
#define MOEODOMINANCERANKFITNESSASSIGNEMENT_H_
|
||||
|
||||
#include <vector>
|
||||
#include <eoPop.h>
|
||||
#include <archive/moeoArchive.h>
|
||||
#include <archive/moeoUnboundedArchive.h>
|
||||
#include <comparator/moeoObjectiveVectorComparator.h>
|
||||
#include <comparator/moeoParetoObjectiveVectorComparator.h>
|
||||
#include <fitness/moeoDominanceBasedFitnessAssignment.h>
|
||||
#include <utils/moeoDominanceMatrix.h>
|
||||
|
||||
/**
|
||||
* Fitness assignment sheme that computes how many solutions each solution is dominated by.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoDominanceRankFitnessAssignment : public moeoDominanceBasedFitnessAssignment < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
|
||||
/** the objective vector type of the solutions */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Default ctor
|
||||
* @param _start a start value used to determine the fitness (default _start = 1.0)
|
||||
* @param _nocopy boolean to penalize clone individuals (default = false)
|
||||
*/
|
||||
moeoDominanceRankFitnessAssignment(double _start=1.0, bool _nocopy=true) : comparator(paretoComparator), archive(defaultArchive), start(_start), matrix(_nocopy)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own archive
|
||||
* @param _archive an archive to be included in the fitness assignment process
|
||||
* @param _start a start value used to determine the fitness (default _start = 1.0)
|
||||
* @param _nocopy boolean to penalize clone individuals (default = false)
|
||||
*/
|
||||
moeoDominanceRankFitnessAssignment(moeoArchive < MOEOT > & _archive, double _start=1.0, bool _nocopy=true) : comparator(paretoComparator), archive(_archive), start(_start), matrix(_nocopy)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own way to compare objective vectors
|
||||
* @param _comparator the functor used to compare objective vectors
|
||||
* @param _start a start value used to determine the fitness (default _start = 1.0)
|
||||
* @param _nocopy boolean to penalize clone individuals (default = false)
|
||||
*/
|
||||
moeoDominanceRankFitnessAssignment(moeoObjectiveVectorComparator < ObjectiveVector > & _comparator, double _start=1.0, bool _nocopy=true) : comparator(_comparator), archive(defaultArchive), start(_start), matrix(_comparator, _nocopy)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Ctor where you can choose your own archive and your own way to compare objective vectors
|
||||
* @param _comparator the functor used to compare objective vectors
|
||||
* @param _archive an archive to be included in the fitness assignment process
|
||||
* @param _start a start value used to determine the fitness (default _start = 1.0)
|
||||
* @param _nocopy boolean to penalize clone individuals (default = false)
|
||||
*/
|
||||
moeoDominanceRankFitnessAssignment(moeoObjectiveVectorComparator < ObjectiveVector > & _comparator, moeoArchive < MOEOT > & _archive, double _start=1.0, bool _nocopy=true) : comparator(_comparator), archive(_archive), start(_start), matrix(_comparator, _nocopy)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the fitness values for every solution contained in the population _pop (and in the archive)
|
||||
* @param _pop the population
|
||||
*/
|
||||
void operator()(eoPop < MOEOT > & _pop)
|
||||
{
|
||||
unsigned int i= archive.size();
|
||||
unsigned int j= _pop.size();
|
||||
matrix(archive, _pop);
|
||||
for (unsigned int k=0; k<i; k++)
|
||||
archive[k].fitness(-(matrix.rank(k)+start));
|
||||
for (unsigned int k=i; k<i+j; k++)
|
||||
_pop[k-i].fitness(-(matrix.rank(k)+start));
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Updates the fitness values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec)
|
||||
{
|
||||
std::cout << "WARNING : updateByDeleting not implemented in moeoDominanceRankFitnessAssignment" << std::endl;
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/** Functor to compare two objective vectors */
|
||||
moeoObjectiveVectorComparator < ObjectiveVector > & comparator;
|
||||
/** Functor to compare two objective vectors according to Pareto dominance relation */
|
||||
moeoParetoObjectiveVectorComparator < ObjectiveVector > paretoComparator;
|
||||
/** Archive to be included in the fitness assignment process */
|
||||
moeoArchive < MOEOT > & archive;
|
||||
/** Default archive */
|
||||
moeoUnboundedArchive < MOEOT > defaultArchive;
|
||||
/** Start value */
|
||||
double start;
|
||||
/** Dominance Matrix */
|
||||
moeoDominanceMatrix < MOEOT > matrix;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEODOMINANCERANKFITNESSASSIGNMENT_H_*/
|
||||
84
trunk/moeo/src/fitness/moeoDummyFitnessAssignment.h
Normal file
84
trunk/moeo/src/fitness/moeoDummyFitnessAssignment.h
Normal file
|
|
@ -0,0 +1,84 @@
|
|||
/*
|
||||
* <moeoDummyFitnessAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEODUMMYFITNESSASSIGNMENT_H_
|
||||
#define MOEODUMMYFITNESSASSIGNMENT_H_
|
||||
|
||||
#include <fitness/moeoFitnessAssignment.h>
|
||||
|
||||
/**
|
||||
* moeoDummyFitnessAssignment is a moeoFitnessAssignment that gives the value '0' as the individual's fitness for a whole population if it is invalid.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoDummyFitnessAssignment : public moeoFitnessAssignment < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/** The type for objective vector */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Sets the fitness to '0' for every individuals of the population _pop if it is invalid
|
||||
* @param _pop the population
|
||||
*/
|
||||
void operator () (eoPop < MOEOT > & _pop)
|
||||
{
|
||||
for (unsigned int idx = 0; idx<_pop.size (); idx++)
|
||||
{
|
||||
if (_pop[idx].invalidFitness())
|
||||
{
|
||||
// set the diversity to 0
|
||||
_pop[idx].fitness(0.0);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Updates the fitness values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec)
|
||||
{
|
||||
// nothing to do... ;-)
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEODUMMYFITNESSASSIGNMENT_H_*/
|
||||
|
|
@ -0,0 +1,227 @@
|
|||
/*
|
||||
* <moeoExpBinaryIndicatorBasedFitnessAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOEXPBINARYINDICATORBASEDFITNESSASSIGNMENT_H_
|
||||
#define MOEOEXPBINARYINDICATORBASEDFITNESSASSIGNMENT_H_
|
||||
|
||||
#include <math.h>
|
||||
#include <vector>
|
||||
#include <eoPop.h>
|
||||
#include <fitness/moeoBinaryIndicatorBasedFitnessAssignment.h>
|
||||
#include <metric/moeoNormalizedSolutionVsSolutionBinaryMetric.h>
|
||||
#include <utils/moeoConvertPopToObjectiveVectors.h>
|
||||
|
||||
/**
|
||||
* Fitness assignment sheme based on an indicator proposed in:
|
||||
* E. Zitzler, S. Künzli, "Indicator-Based Selection in Multiobjective Search", Proc. 8th International Conference on Parallel Problem Solving from Nature (PPSN VIII), pp. 832-842, Birmingham, UK (2004).
|
||||
* This strategy is, for instance, used in IBEA.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoExpBinaryIndicatorBasedFitnessAssignment : public moeoBinaryIndicatorBasedFitnessAssignment < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/** The type of objective vector */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Ctor.
|
||||
* @param _metric the quality indicator
|
||||
* @param _kappa the scaling factor
|
||||
*/
|
||||
moeoExpBinaryIndicatorBasedFitnessAssignment(moeoNormalizedSolutionVsSolutionBinaryMetric < ObjectiveVector, double > & _metric, const double _kappa = 0.05) : metric(_metric), kappa(_kappa)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the fitness values for every solution contained in the population _pop
|
||||
* @param _pop the population
|
||||
*/
|
||||
void operator()(eoPop < MOEOT > & _pop)
|
||||
{
|
||||
// 1 - setting of the bounds
|
||||
setup(_pop);
|
||||
// 2 - computing every indicator values
|
||||
computeValues(_pop);
|
||||
// 3 - setting fitnesses
|
||||
setFitnesses(_pop);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Updates the fitness values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec)
|
||||
{
|
||||
std::vector < double > v;
|
||||
v.resize(_pop.size());
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
v[i] = metric(_objVec, _pop[i].objectiveVector());
|
||||
}
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
_pop[i].fitness( _pop[i].fitness() + exp(-v[i]/kappa) );
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Updates the fitness values of the whole population _pop by taking the adding of the objective vector _objVec into account
|
||||
* and returns the fitness value of _objVec.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
*/
|
||||
double updateByAdding(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec)
|
||||
{
|
||||
std::vector < double > v;
|
||||
// update every fitness values to take the new individual into account
|
||||
v.resize(_pop.size());
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
v[i] = metric(_objVec, _pop[i].objectiveVector());
|
||||
}
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
_pop[i].fitness( _pop[i].fitness() - exp(-v[i]/kappa) );
|
||||
}
|
||||
// compute the fitness of the new individual
|
||||
v.clear();
|
||||
v.resize(_pop.size());
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
v[i] = metric(_pop[i].objectiveVector(), _objVec);
|
||||
}
|
||||
double result = 0;
|
||||
for (unsigned int i=0; i<v.size(); i++)
|
||||
{
|
||||
result -= exp(-v[i]/kappa);
|
||||
}
|
||||
return result;
|
||||
}
|
||||
|
||||
|
||||
protected:
|
||||
|
||||
/** the quality indicator */
|
||||
moeoNormalizedSolutionVsSolutionBinaryMetric < ObjectiveVector, double > & metric;
|
||||
/** the scaling factor */
|
||||
double kappa;
|
||||
/** the computed indicator values */
|
||||
std::vector < std::vector<double> > values;
|
||||
|
||||
|
||||
/**
|
||||
* Sets the bounds for every objective using the min and the max value for every objective vector of _pop
|
||||
* @param _pop the population
|
||||
*/
|
||||
void setup(const eoPop < MOEOT > & _pop)
|
||||
{
|
||||
double min, max;
|
||||
for (unsigned int i=0; i<ObjectiveVector::Traits::nObjectives(); i++)
|
||||
{
|
||||
min = _pop[0].objectiveVector()[i];
|
||||
max = _pop[0].objectiveVector()[i];
|
||||
for (unsigned int j=1; j<_pop.size(); j++)
|
||||
{
|
||||
min = std::min(min, _pop[j].objectiveVector()[i]);
|
||||
max = std::max(max, _pop[j].objectiveVector()[i]);
|
||||
}
|
||||
// setting of the bounds for the objective i
|
||||
metric.setup(min, max, i);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Compute every indicator value in values (values[i] = I(_v[i], _o))
|
||||
* @param _pop the population
|
||||
*/
|
||||
void computeValues(const eoPop < MOEOT > & _pop)
|
||||
{
|
||||
values.clear();
|
||||
values.resize(_pop.size());
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
values[i].resize(_pop.size());
|
||||
for (unsigned int j=0; j<_pop.size(); j++)
|
||||
{
|
||||
if (i != j)
|
||||
{
|
||||
values[i][j] = metric(_pop[i].objectiveVector(), _pop[j].objectiveVector());
|
||||
}
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the fitness value of the whple population
|
||||
* @param _pop the population
|
||||
*/
|
||||
void setFitnesses(eoPop < MOEOT > & _pop)
|
||||
{
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
_pop[i].fitness(computeFitness(i));
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns the fitness value of the _idx th individual of the population
|
||||
* @param _idx the index
|
||||
*/
|
||||
double computeFitness(const unsigned int _idx)
|
||||
{
|
||||
double result = 0;
|
||||
for (unsigned int i=0; i<values.size(); i++)
|
||||
{
|
||||
if (i != _idx)
|
||||
{
|
||||
result -= exp(-values[i][_idx]/kappa);
|
||||
}
|
||||
}
|
||||
return result;
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOEXPBINARYINDICATORBASEDFITNESSASSIGNMENT_H_*/
|
||||
76
trunk/moeo/src/fitness/moeoFitnessAssignment.h
Normal file
76
trunk/moeo/src/fitness/moeoFitnessAssignment.h
Normal file
|
|
@ -0,0 +1,76 @@
|
|||
/*
|
||||
* <moeoFitnessAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOFITNESSASSIGNMENT_H_
|
||||
#define MOEOFITNESSASSIGNMENT_H_
|
||||
|
||||
#include <eoFunctor.h>
|
||||
#include <eoPop.h>
|
||||
|
||||
/**
|
||||
* Functor that sets the fitness values of a whole population.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoFitnessAssignment : public eoUF < eoPop < MOEOT > &, void >
|
||||
{
|
||||
public:
|
||||
|
||||
/** The type for objective vector */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
|
||||
/**
|
||||
* Updates the fitness values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
*/
|
||||
virtual void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec) = 0;
|
||||
|
||||
|
||||
/**
|
||||
* Updates the fitness values of the whole population _pop by taking the deletion of the individual _moeo into account.
|
||||
* @param _pop the population
|
||||
* @param _moeo the individual
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, MOEOT & _moeo)
|
||||
{
|
||||
updateByDeleting(_pop, _moeo.objectiveVector());
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOFITNESSASSIGNMENT_H_*/
|
||||
50
trunk/moeo/src/fitness/moeoIndicatorBasedFitnessAssignment.h
Normal file
50
trunk/moeo/src/fitness/moeoIndicatorBasedFitnessAssignment.h
Normal file
|
|
@ -0,0 +1,50 @@
|
|||
/*
|
||||
* <moeoIndicatorBasedFitnessAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOINDICATORBASEDFITNESSASSIGNMENT_H_
|
||||
#define MOEOINDICATORBASEDFITNESSASSIGNMENT_H_
|
||||
|
||||
#include <fitness/moeoFitnessAssignment.h>
|
||||
|
||||
/**
|
||||
* moeoIndicatorBasedFitnessAssignment is a moeoFitnessAssignment for Indicator-based strategies.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoIndicatorBasedFitnessAssignment : public moeoFitnessAssignment < MOEOT >
|
||||
{};
|
||||
|
||||
#endif /*MOEOINDICATORBASEDFITNESSASSIGNMENT_H_*/
|
||||
134
trunk/moeo/src/fitness/moeoReferencePointIndicatorBasedFitnessAssignment.h
Executable file
134
trunk/moeo/src/fitness/moeoReferencePointIndicatorBasedFitnessAssignment.h
Executable file
|
|
@ -0,0 +1,134 @@
|
|||
/*
|
||||
* <moeoReferencePointIndicatorBasedFitnessAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOREFERENCEPOINTINDICATORBASEDFITNESSASSIGNMENT_H_
|
||||
#define MOEOREFERENCEPOINTINDICATORBASEDFITNESSASSIGNMENT_H_
|
||||
|
||||
#include <math.h>
|
||||
#include <eoPop.h>
|
||||
#include <fitness/moeoFitnessAssignment.h>
|
||||
#include <metric/moeoNormalizedSolutionVsSolutionBinaryMetric.h>
|
||||
|
||||
/**
|
||||
* Fitness assignment sheme based a Reference Point and a Quality Indicator.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoReferencePointIndicatorBasedFitnessAssignment : public moeoFitnessAssignment < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/** The type of objective vector */
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
|
||||
/**
|
||||
* Ctor
|
||||
* @param _refPoint the reference point
|
||||
* @param _metric the quality indicator
|
||||
*/
|
||||
moeoReferencePointIndicatorBasedFitnessAssignment (ObjectiveVector & _refPoint, moeoNormalizedSolutionVsSolutionBinaryMetric < ObjectiveVector, double > & _metric) :
|
||||
refPoint(_refPoint), metric(_metric)
|
||||
{}
|
||||
|
||||
|
||||
/**
|
||||
* Sets the fitness values for every solution contained in the population _pop
|
||||
* @param _pop the population
|
||||
*/
|
||||
void operator()(eoPop < MOEOT > & _pop)
|
||||
{
|
||||
// 1 - setting of the bounds
|
||||
setup(_pop);
|
||||
// 2 - setting fitnesses
|
||||
setFitnesses(_pop);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Updates the fitness values of the whole population _pop by taking the deletion of the objective vector _objVec into account.
|
||||
* @param _pop the population
|
||||
* @param _objVec the objective vector
|
||||
*/
|
||||
void updateByDeleting(eoPop < MOEOT > & _pop, ObjectiveVector & _objVec)
|
||||
{
|
||||
// nothing to do ;-)
|
||||
}
|
||||
|
||||
|
||||
protected:
|
||||
|
||||
/** the reference point */
|
||||
ObjectiveVector & refPoint;
|
||||
/** the quality indicator */
|
||||
moeoNormalizedSolutionVsSolutionBinaryMetric < ObjectiveVector, double > & metric;
|
||||
|
||||
|
||||
/**
|
||||
* Sets the bounds for every objective using the min and the max value for every objective vector of _pop (and the reference point)
|
||||
* @param _pop the population
|
||||
*/
|
||||
void setup(const eoPop < MOEOT > & _pop)
|
||||
{
|
||||
double min, max;
|
||||
for (unsigned int i=0; i<ObjectiveVector::Traits::nObjectives(); i++)
|
||||
{
|
||||
min = refPoint[i];
|
||||
max = refPoint[i];
|
||||
for (unsigned int j=0; j<_pop.size(); j++)
|
||||
{
|
||||
min = std::min(min, _pop[j].objectiveVector()[i]);
|
||||
max = std::max(max, _pop[j].objectiveVector()[i]);
|
||||
}
|
||||
// setting of the bounds for the objective i
|
||||
metric.setup(min, max, i);
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Sets the fitness of every individual contained in the population _pop
|
||||
* @param _pop the population
|
||||
*/
|
||||
void setFitnesses(eoPop < MOEOT > & _pop)
|
||||
{
|
||||
for (unsigned int i=0; i<_pop.size(); i++)
|
||||
{
|
||||
_pop[i].fitness(- metric(_pop[i].objectiveVector(), refPoint) );
|
||||
}
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOREFERENCEPOINTINDICATORBASEDFITNESSASSIGNMENT_H_*/
|
||||
50
trunk/moeo/src/fitness/moeoScalarFitnessAssignment.h
Normal file
50
trunk/moeo/src/fitness/moeoScalarFitnessAssignment.h
Normal file
|
|
@ -0,0 +1,50 @@
|
|||
/*
|
||||
* <moeoScalarFitnessAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOSCALARFITNESSASSIGNMENT_H_
|
||||
#define MOEOSCALARFITNESSASSIGNMENT_H_
|
||||
|
||||
#include <fitness/moeoFitnessAssignment.h>
|
||||
|
||||
/**
|
||||
* moeoScalarFitnessAssignment is a moeoFitnessAssignment for scalar strategies.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoScalarFitnessAssignment : public moeoFitnessAssignment < MOEOT >
|
||||
{};
|
||||
|
||||
#endif /*MOEOSCALARFITNESSASSIGNMENT_H_*/
|
||||
67
trunk/moeo/src/fitness/moeoSingleObjectivization.h
Normal file
67
trunk/moeo/src/fitness/moeoSingleObjectivization.h
Normal file
|
|
@ -0,0 +1,67 @@
|
|||
/*
|
||||
* <moeoSingleObjectivization.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2009
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* François Legillon
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOSINGLEOBJECTIVIZATION_H_
|
||||
#define MOEOSINGLEOBJECTIVIZATION_H_
|
||||
|
||||
#include <fitness/moeoFitnessAssignment.h>
|
||||
#include <eoEvalFunc.h>
|
||||
/**
|
||||
* Class to adapt multiobjective problems to single objective algorithms
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoSingleObjectivization : public moeoFitnessAssignment < MOEOT > , public eoEvalFunc < MOEOT >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* herited from moeoFitnessAssignment
|
||||
* @param _pop the population
|
||||
*/
|
||||
virtual void operator () (eoPop < MOEOT > & _pop)=0;
|
||||
|
||||
/**
|
||||
herited from eoEvalFunc
|
||||
@param _moeot
|
||||
*/
|
||||
virtual void operator() (MOEOT & _moeot)=0;
|
||||
|
||||
virtual typename MOEOT::Fitness operator() (const typename MOEOT::ObjectiveVector & _obj)=0;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOSINGLEOBJECTIVIZATION_H_*/
|
||||
|
|
@ -0,0 +1,50 @@
|
|||
/*
|
||||
* <moeoUnaryIndicatorBasedFitnessAssignment.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOUNARYINDICATORBASEDFITNESSASSIGNMENT_H_
|
||||
#define MOEOUNARYINDICATORBASEDFITNESSASSIGNMENT_H_
|
||||
|
||||
#include <fitness/moeoIndicatorBasedFitnessAssignment.h>
|
||||
|
||||
/**
|
||||
* moeoIndicatorBasedFitnessAssignment for unary indicators.
|
||||
*/
|
||||
template < class MOEOT >
|
||||
class moeoUnaryIndicatorBasedFitnessAssignment : public moeoIndicatorBasedFitnessAssignment < MOEOT >
|
||||
{};
|
||||
|
||||
#endif /*MOEOINDICATORBASEDFITNESSASSIGNMENT_H_*/
|
||||
150
trunk/moeo/src/hybridization/moeoDMLSGenUpdater.h
Normal file
150
trunk/moeo/src/hybridization/moeoDMLSGenUpdater.h
Normal file
|
|
@ -0,0 +1,150 @@
|
|||
/*
|
||||
* <moeoDMLSGenUpdater.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef _MOEODMLSGENUPDATER_H
|
||||
#define _MOEODMLSGENUPDATER_H
|
||||
|
||||
#include <eoGenContinue.h>
|
||||
#include <eoEvalFunc.h>
|
||||
#include <archive/moeoArchive.h>
|
||||
#include <archive/moeoUnboundedArchive.h>
|
||||
#include <explorer/moeoPopNeighborhoodExplorer.h>
|
||||
#include <selection/moeoUnvisitedSelect.h>
|
||||
#include <algo/moeoUnifiedDominanceBasedLS.h>
|
||||
|
||||
/** updater allowing hybridization with a dmls at checkpointing*/
|
||||
template < class Neighbor >
|
||||
class moeoDMLSGenUpdater : public eoUpdater
|
||||
{
|
||||
|
||||
typedef typename Neighbor::EOT MOEOT;
|
||||
|
||||
public :
|
||||
/** Ctor with a dmls.
|
||||
* @param _dmls the dmls use for the hybridization (!!! Special care is needed when choosing the continuator of the dmls !!!)
|
||||
* @param _dmlsArchive an archive (used to instantiate the dmls)
|
||||
* @param _globalArchive the same archive used in the other algorithm
|
||||
* @param _continuator is a Generational Continuator which allow to run dmls on the global archive each X generation(s)
|
||||
* @param _verbose verbose mode
|
||||
*/
|
||||
moeoDMLSGenUpdater(moeoUnifiedDominanceBasedLS <Neighbor> & _dmls,
|
||||
moeoArchive < MOEOT > & _dmlsArchive,
|
||||
moeoArchive < MOEOT > & _globalArchive,
|
||||
eoGenContinue < MOEOT > & _continuator,
|
||||
bool _verbose = true):
|
||||
defaultContinuator(0), dmlsArchive(_dmlsArchive), dmls(_dmls), globalArchive(_globalArchive), continuator(_continuator), verbose(_verbose){}
|
||||
|
||||
/** Ctor with a dmls.
|
||||
* @param _eval a evaluation function (used to instantiate the dmls)
|
||||
* @param _explorer a neighborhood explorer (used to instantiate the dmls)
|
||||
* @param _select a selector of unvisited individuals of a population (used to instantiate the dmls)
|
||||
* @param _globalArchive the same archive used in the other algorithm
|
||||
* @param _continuator is a Generational Continuator which allow to run dmls on the global archive each X generation(s)
|
||||
* @param _step (default=1) is the number of Generation of dmls (used to instantiate the defaultContinuator for the dmls)
|
||||
* @param _verbose verbose mode
|
||||
*/
|
||||
moeoDMLSGenUpdater(eoEvalFunc < MOEOT > & _eval,
|
||||
moeoPopNeighborhoodExplorer < Neighbor > & _explorer,
|
||||
moeoUnvisitedSelect < MOEOT > & _select,
|
||||
moeoArchive < MOEOT > & _globalArchive,
|
||||
eoGenContinue < MOEOT > & _continuator,
|
||||
unsigned int _step=1,
|
||||
bool _verbose = true):
|
||||
defaultContinuator(_step), dmlsArchive(defaultArchive), dmls(defaultContinuator, _eval, defaultArchive, _explorer, _select), globalArchive(_globalArchive), continuator(_continuator), verbose(_verbose){}
|
||||
|
||||
/** Ctor with a dmls.
|
||||
* @param _eval a evaluation function (used to instantiate the dmls)
|
||||
* @param _dmlsArchive an archive (used to instantiate the dmls)
|
||||
* @param _explorer a neighborhood explorer (used to instantiate the dmls)
|
||||
* @param _select a selector of unvisited individuals of a population (used to instantiate the dmls)
|
||||
* @param _globalArchive the same archive used in the other algorithm
|
||||
* @param _continuator is a Generational Continuator which allow to run dmls on the global archive each X generation(s)
|
||||
* @param _step (default=1) is the number of Generation of dmls (used to instantiate the defaultContinuator for the dmls)
|
||||
* @param _verbose verbose mode
|
||||
*/
|
||||
moeoDMLSGenUpdater(eoEvalFunc < MOEOT > & _eval,
|
||||
moeoArchive < MOEOT > & _dmlsArchive,
|
||||
moeoPopNeighborhoodExplorer < Neighbor > & _explorer,
|
||||
moeoUnvisitedSelect < MOEOT > & _select,
|
||||
moeoArchive < MOEOT > & _globalArchive,
|
||||
eoGenContinue < MOEOT > & _continuator,
|
||||
unsigned int _step=1,
|
||||
bool _verbose = true):
|
||||
defaultContinuator(_step), dmlsArchive(_dmlsArchive), dmls(defaultContinuator, _eval, _dmlsArchive, _explorer, _select), globalArchive(_globalArchive), continuator(_continuator), verbose(_verbose){}
|
||||
|
||||
/** functor which allow to run the dmls*/
|
||||
virtual void operator()()
|
||||
{
|
||||
if(!continuator(globalArchive)){
|
||||
if(verbose)
|
||||
std::cout << std::endl << "moeoDMLSGenUpdater: dmls start" << std::endl;
|
||||
dmls(globalArchive);
|
||||
globalArchive(dmlsArchive);
|
||||
if(verbose)
|
||||
std::cout << "moeoDMLSGenUpdater: dmls stop" << std::endl;
|
||||
defaultContinuator.totalGenerations(defaultContinuator.totalGenerations());
|
||||
if(verbose)
|
||||
std::cout << "the other algorithm restart for " << continuator.totalGenerations() << " generation(s)" << std::endl << std::endl;
|
||||
continuator.totalGenerations(continuator.totalGenerations());
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* @return the class name
|
||||
*/
|
||||
virtual std::string className(void) const { return "moeoDMLSGenUpdater"; }
|
||||
|
||||
private:
|
||||
/** defaultContinuator used for the dmls */
|
||||
eoGenContinue < MOEOT > defaultContinuator;
|
||||
/** dmls archive */
|
||||
moeoArchive < MOEOT > & dmlsArchive;
|
||||
/** default archive used for the dmls */
|
||||
moeoUnboundedArchive < MOEOT > defaultArchive;
|
||||
/** the dmls */
|
||||
moeoUnifiedDominanceBasedLS <Neighbor> dmls;
|
||||
/** the global archive */
|
||||
moeoArchive < MOEOT > & globalArchive;
|
||||
/** continuator used to run the dmls each X generation(s) */
|
||||
eoGenContinue < MOEOT > & continuator;
|
||||
/** verbose mode */
|
||||
bool verbose;
|
||||
};
|
||||
|
||||
|
||||
#endif /*_MOEODMLSGENUPDATER_H_*/
|
||||
134
trunk/moeo/src/hybridization/moeoDMLSMonOp.h
Normal file
134
trunk/moeo/src/hybridization/moeoDMLSMonOp.h
Normal file
|
|
@ -0,0 +1,134 @@
|
|||
/*
|
||||
* <moeoDMLSMonOp.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2008
|
||||
* (C) OPAC Team, LIFL, 2002-2008
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
* Jérémie Humeau
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef _MOEODMLSMONOP_H
|
||||
#define _MOEODMLSMONOP_H
|
||||
|
||||
#include <eoGenContinue.h>
|
||||
#include <utils/eoRNG.h>
|
||||
#include <eoEvalFunc.h>
|
||||
#include <archive/moeoArchive.h>
|
||||
#include <archive/moeoUnboundedArchive.h>
|
||||
#include <explorer/moeoPopNeighborhoodExplorer.h>
|
||||
#include <selection/moeoUnvisitedSelect.h>
|
||||
#include <algo/moeoUnifiedDominanceBasedLS.h>
|
||||
|
||||
/** eoMonOp allowing hybridization with a dmls at mutation */
|
||||
template < class Neighbor >
|
||||
class moeoDMLSMonOp : public eoMonOp < typename Neighbor::EOT >
|
||||
{
|
||||
|
||||
typedef typename Neighbor::EOT MOEOT;
|
||||
|
||||
public :
|
||||
/** Ctor with a dmls.
|
||||
* @param _dmls the dmls use for the hybridization (!!! Special care is needed when choosing the continuator of the dmls !!!)
|
||||
* @param _dmlsArchive an archive (used to instantiate the dmls)
|
||||
* @param _verbose verbose mode
|
||||
*/
|
||||
moeoDMLSMonOp(moeoUnifiedDominanceBasedLS <Neighbor> & _dmls,
|
||||
moeoArchive < MOEOT > & _dmlsArchive,
|
||||
bool _verbose = true):
|
||||
defaultContinuator(0), dmlsArchive(_dmlsArchive), dmls(_dmls), verbose(_verbose) {}
|
||||
|
||||
/** Ctor with a dmls.
|
||||
* @param _eval a evaluation function (used to instantiate the dmls)
|
||||
* @param _explorer a neighborhood explorer (used to instantiate the dmls)
|
||||
* @param _select a selector of unvisited individuals of a population (used to instantiate the dmls)
|
||||
* @param _step (default=1) is the number of Generation of dmls (used to instantiate the defaultContinuator for the dmls)
|
||||
* @param _verbose verbose mode
|
||||
*/
|
||||
moeoDMLSMonOp(eoEvalFunc < MOEOT > & _eval,
|
||||
moeoPopNeighborhoodExplorer < Neighbor > & _explorer,
|
||||
moeoUnvisitedSelect < MOEOT > & _select,
|
||||
unsigned int _step=1,
|
||||
bool _verbose = true):
|
||||
defaultContinuator(_step), dmlsArchive(defaultArchive), dmls(defaultContinuator, _eval, defaultArchive, _explorer, _select), verbose(_verbose){}
|
||||
|
||||
/** Ctor with a dmls.
|
||||
* @param _eval a evaluation function (used to instantiate the dmls)
|
||||
* @param _dmlsArchive an archive (used to instantiate the dmls)
|
||||
* @param _explorer a neighborhood explorer (used to instantiate the dmls)
|
||||
* @param _select a selector of unvisited individuals of a population (used to instantiate the dmls)
|
||||
* @param _step (default=1) is the number of Generation of dmls (used to instantiate the defaultContinuator for the dmls)
|
||||
* @param _verbose verbose mode
|
||||
*/
|
||||
moeoDMLSMonOp(eoEvalFunc < MOEOT > & _eval,
|
||||
moeoArchive < MOEOT > & _dmlsArchive,
|
||||
moeoPopNeighborhoodExplorer < Neighbor > & _explorer,
|
||||
moeoUnvisitedSelect < MOEOT > & _select,
|
||||
unsigned int _step=1,
|
||||
bool _verbose = true):
|
||||
defaultContinuator(_step), dmlsArchive(_dmlsArchive), dmls(defaultContinuator, _eval, _dmlsArchive, _explorer, _select), verbose(_verbose){}
|
||||
|
||||
/** functor which allow to run the dmls on a MOEOT and return one of the resulting archive*/
|
||||
bool operator()( MOEOT & _moeo)
|
||||
{
|
||||
if(verbose)
|
||||
std::cout << std::endl << "moeoDMLSMonOp: dmls start" << std::endl;
|
||||
unsigned int tmp;
|
||||
eoPop < MOEOT> pop;
|
||||
pop.push_back(_moeo);
|
||||
dmls(pop);
|
||||
tmp = rng.random(dmlsArchive.size());
|
||||
_moeo = dmlsArchive[tmp];
|
||||
defaultContinuator.totalGenerations(defaultContinuator.totalGenerations());
|
||||
if(verbose)
|
||||
std::cout << "moeoDMLSMonOp: dmls stop" << std::endl << std::endl;
|
||||
return false;
|
||||
}
|
||||
|
||||
/**
|
||||
* @return the class name
|
||||
*/
|
||||
virtual std::string className(void) const { return "moeoDMLSMonOp"; }
|
||||
|
||||
private:
|
||||
/** defaultContinuator used for the dmls */
|
||||
eoGenContinue < MOEOT > defaultContinuator;
|
||||
/** dmls archive */
|
||||
moeoArchive < MOEOT > & dmlsArchive;
|
||||
/** default archive used for the dmls */
|
||||
moeoUnboundedArchive < MOEOT > defaultArchive;
|
||||
/** the dmls */
|
||||
moeoUnifiedDominanceBasedLS <Neighbor> dmls;
|
||||
/** verbose mode */
|
||||
bool verbose;
|
||||
};
|
||||
|
||||
#endif /*_MOEODMLSMONOP_H_*/
|
||||
109
trunk/moeo/src/metric/moeoAdditiveEpsilonBinaryMetric.h
Normal file
109
trunk/moeo/src/metric/moeoAdditiveEpsilonBinaryMetric.h
Normal file
|
|
@ -0,0 +1,109 @@
|
|||
/*
|
||||
* <moeoAdditiveEpsilonBinaryMetric.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOADDITIVEEPSILONBINARYMETRIC_H_
|
||||
#define MOEOADDITIVEEPSILONBINARYMETRIC_H_
|
||||
|
||||
#include <metric/moeoNormalizedSolutionVsSolutionBinaryMetric.h>
|
||||
|
||||
/**
|
||||
* Additive epsilon binary metric allowing to compare two objective vectors as proposed in
|
||||
* Zitzler E., Thiele L., Laumanns M., Fonseca C. M., Grunert da Fonseca V.:
|
||||
* Performance Assessment of Multiobjective Optimizers: An Analysis and Review. IEEE Transactions on Evolutionary Computation 7(2), pp.117–132 (2003).
|
||||
*/
|
||||
template < class ObjectiveVector >
|
||||
class moeoAdditiveEpsilonBinaryMetric : public moeoNormalizedSolutionVsSolutionBinaryMetric < ObjectiveVector, double >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Returns the minimal distance by which the objective vector _o1 must be translated in all objectives
|
||||
* so that it weakly dominates the objective vector _o2
|
||||
* @warning don't forget to set the bounds for every objective before the call of this function
|
||||
* @param _o1 the first objective vector
|
||||
* @param _o2 the second objective vector
|
||||
*/
|
||||
double operator()(const ObjectiveVector & _o1, const ObjectiveVector & _o2)
|
||||
{
|
||||
// computation of the epsilon value for the first objective
|
||||
double result = epsilon(_o1, _o2, 0);
|
||||
// computation of the epsilon value for the other objectives
|
||||
double tmp;
|
||||
for (unsigned int i=1; i<ObjectiveVector::Traits::nObjectives(); i++)
|
||||
{
|
||||
tmp = epsilon(_o1, _o2, i);
|
||||
result = std::max(result, tmp);
|
||||
}
|
||||
// returns the maximum epsilon value
|
||||
return result;
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/** the bounds for every objective */
|
||||
using moeoNormalizedSolutionVsSolutionBinaryMetric < ObjectiveVector, double > :: bounds;
|
||||
|
||||
|
||||
/**
|
||||
* Returns the epsilon value by which the objective vector _o1 must be translated in the objective _obj
|
||||
* so that it dominates the objective vector _o2
|
||||
* @param _o1 the first objective vector
|
||||
* @param _o2 the second objective vector
|
||||
* @param _obj the index of the objective
|
||||
*/
|
||||
double epsilon(const ObjectiveVector & _o1, const ObjectiveVector & _o2, const unsigned int _obj)
|
||||
{
|
||||
double result;
|
||||
// if the objective _obj have to be minimized
|
||||
if (ObjectiveVector::Traits::minimizing(_obj))
|
||||
{
|
||||
// _o1[_obj] - _o2[_obj]
|
||||
result = ( (_o1[_obj] - bounds[_obj].minimum()) / bounds[_obj].range() ) - ( (_o2[_obj] - bounds[_obj].minimum()) / bounds[_obj].range() );
|
||||
}
|
||||
// if the objective _obj have to be maximized
|
||||
else
|
||||
{
|
||||
// _o2[_obj] - _o1[_obj]
|
||||
result = ( (_o2[_obj] - bounds[_obj].minimum()) / bounds[_obj].range() ) - ( (_o1[_obj] - bounds[_obj].minimum()) / bounds[_obj].range() );
|
||||
}
|
||||
return result;
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOADDITIVEEPSILONBINARYMETRIC_H_*/
|
||||
138
trunk/moeo/src/metric/moeoContributionMetric.h
Normal file
138
trunk/moeo/src/metric/moeoContributionMetric.h
Normal file
|
|
@ -0,0 +1,138 @@
|
|||
/*
|
||||
* <moeoContributionMetric.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOCONTRIBUTIONMETRIC_H_
|
||||
#define MOEOCONTRIBUTIONMETRIC_H_
|
||||
|
||||
#include <comparator/moeoParetoObjectiveVectorComparator.h>
|
||||
#include <metric/moeoMetric.h>
|
||||
|
||||
/**
|
||||
* The contribution metric evaluates the proportion of non-dominated solutions given by a Pareto set relatively to another Pareto set
|
||||
* (Meunier, Talbi, Reininger: 'A multiobjective genetic algorithm for radio network optimization', in Proc. of the 2000 Congress on Evolutionary Computation, IEEE Press, pp. 317-324)
|
||||
*/
|
||||
template < class ObjectiveVector >
|
||||
class moeoContributionMetric : public moeoVectorVsVectorBinaryMetric < ObjectiveVector, double >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Returns the contribution of the Pareto set '_set1' relatively to the Pareto set '_set2'
|
||||
* @param _set1 the first Pareto set
|
||||
* @param _set2 the second Pareto set
|
||||
*/
|
||||
double operator()(const std::vector < ObjectiveVector > & _set1, const std::vector < ObjectiveVector > & _set2)
|
||||
{
|
||||
unsigned int c = card_C(_set1, _set2);
|
||||
unsigned int w1 = card_W(_set1, _set2);
|
||||
unsigned int n1 = card_N(_set1, _set2);
|
||||
unsigned int w2 = card_W(_set2, _set1);
|
||||
unsigned int n2 = card_N(_set2, _set1);
|
||||
return (double) (c / 2.0 + w1 + n1) / (c + w1 + n1 + w2 + n2);
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/** Functor to compare two objective vectors according to Pareto dominance relation */
|
||||
moeoParetoObjectiveVectorComparator < ObjectiveVector > paretoComparator;
|
||||
|
||||
|
||||
/**
|
||||
* Returns the number of solutions both in '_set1' and '_set2'
|
||||
* @param _set1 the first Pareto set
|
||||
* @param _set2 the second Pareto set
|
||||
*/
|
||||
unsigned int card_C (const std::vector < ObjectiveVector > & _set1, const std::vector < ObjectiveVector > & _set2)
|
||||
{
|
||||
unsigned int c=0;
|
||||
for (unsigned int i=0; i<_set1.size(); i++)
|
||||
for (unsigned int j=0; j<_set2.size(); j++)
|
||||
if (_set1[i] == _set2[j])
|
||||
{
|
||||
c++;
|
||||
break;
|
||||
}
|
||||
return c;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns the number of solutions in '_set1' dominating at least one solution of '_set2'
|
||||
* @param _set1 the first Pareto set
|
||||
* @param _set2 the second Pareto set
|
||||
*/
|
||||
unsigned int card_W (const std::vector < ObjectiveVector > & _set1, const std::vector < ObjectiveVector > & _set2)
|
||||
{
|
||||
unsigned int w=0;
|
||||
for (unsigned int i=0; i<_set1.size(); i++)
|
||||
for (unsigned int j=0; j<_set2.size(); j++)
|
||||
if (paretoComparator(_set2[j], _set1[i]))
|
||||
{
|
||||
w++;
|
||||
break;
|
||||
}
|
||||
return w;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Returns the number of solutions in '_set1' having no relation of dominance with those from '_set2'
|
||||
* @param _set1 the first Pareto set
|
||||
* @param _set2 the second Pareto set
|
||||
*/
|
||||
unsigned int card_N (const std::vector < ObjectiveVector > & _set1, const std::vector < ObjectiveVector > & _set2)
|
||||
{
|
||||
unsigned int n=0;
|
||||
for (unsigned int i=0; i<_set1.size(); i++)
|
||||
{
|
||||
bool domin_rel = false;
|
||||
for (unsigned int j=0; j<_set2.size(); j++)
|
||||
if ( (paretoComparator(_set2[j], _set1[i])) || (paretoComparator(_set1[i], _set2[j])) )
|
||||
{
|
||||
domin_rel = true;
|
||||
break;
|
||||
}
|
||||
if (! domin_rel)
|
||||
n++;
|
||||
}
|
||||
return n;
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOCONTRIBUTIONMETRIC_H_*/
|
||||
86
trunk/moeo/src/metric/moeoDistanceMetric.h
Normal file
86
trunk/moeo/src/metric/moeoDistanceMetric.h
Normal file
|
|
@ -0,0 +1,86 @@
|
|||
/*
|
||||
* <moeoDistanceMetric.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Jeremie Humeau
|
||||
* Arnaud Liefooghe
|
||||
* François Legillon
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
#ifndef MOEODISTANCEMETRIC_H_
|
||||
#define MOEODISTANCEMETRIC_H_
|
||||
|
||||
#include <cmath>
|
||||
#include <distance/moeoObjSpaceDistance.h>
|
||||
|
||||
/**
|
||||
Adapter to use Distances as a metric
|
||||
*/
|
||||
template < class MOEOT>
|
||||
class moeoDistanceMetric : public moeoUnaryMetric < typename MOEOT::ObjectiveVector , typename MOEOT::Fitness >
|
||||
{
|
||||
public:
|
||||
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
|
||||
typedef typename MOEOT::Fitness Fitness;
|
||||
|
||||
/**
|
||||
constructor with a normalizer
|
||||
@param _distance the distance
|
||||
@param _referencePoint the point from which we evaluate the distance
|
||||
@param _normalizer the normalizer
|
||||
*/
|
||||
moeoDistanceMetric(moeoObjSpaceDistance<MOEOT> &_distance, const ObjectiveVector &_referencePoint,moeoObjectiveVectorNormalizer<MOEOT>& _normalizer): distance(_distance), reference(_referencePoint),normalizer(_normalizer){}
|
||||
|
||||
/**
|
||||
constructor with a dummy normalizer
|
||||
@param _distance the distance
|
||||
@param _referencePoint the point from which we evaluate the distance
|
||||
*/
|
||||
moeoDistanceMetric(moeoObjSpaceDistance<MOEOT> &_distance, const ObjectiveVector &_referencePoint): distance(_distance), reference(_referencePoint),normalizer(defaultNormalizer){}
|
||||
|
||||
/**
|
||||
fonction which apply the metric to calculate a fitness
|
||||
@param _obj the point to evaluate
|
||||
@return the fitness conrresponding to the distance
|
||||
*/
|
||||
Fitness operator()(ObjectiveVector _obj){
|
||||
return distance(normalizer(reference), normalizer(_obj));
|
||||
}
|
||||
|
||||
private:
|
||||
moeoObjSpaceDistance<MOEOT>& distance;
|
||||
const ObjectiveVector& reference;
|
||||
moeoObjectiveVectorNormalizer<MOEOT> defaultNormalizer;
|
||||
moeoObjectiveVectorNormalizer<MOEOT>& normalizer;
|
||||
|
||||
};
|
||||
#endif
|
||||
223
trunk/moeo/src/metric/moeoEntropyMetric.h
Normal file
223
trunk/moeo/src/metric/moeoEntropyMetric.h
Normal file
|
|
@ -0,0 +1,223 @@
|
|||
/*
|
||||
* <moeoEntropyMetric.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOENTROPYMETRIC_H_
|
||||
#define MOEOENTROPYMETRIC_H_
|
||||
|
||||
#include <vector>
|
||||
#include <comparator/moeoParetoObjectiveVectorComparator.h>
|
||||
#include <metric/moeoMetric.h>
|
||||
|
||||
/**
|
||||
* The entropy gives an idea of the diversity of a Pareto set relatively to another
|
||||
* (Basseur, Seynhaeve, Talbi: 'Design of Multi-objective Evolutionary Algorithms: Application to the Flow-shop Scheduling Problem', in Proc. of the 2002 Congress on Evolutionary Computation, IEEE Press, pp. 1155-1156)
|
||||
*/
|
||||
template < class ObjectiveVector >
|
||||
class moeoEntropyMetric : public moeoVectorVsVectorBinaryMetric < ObjectiveVector, double >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Returns the entropy of the Pareto set '_set1' relatively to the Pareto set '_set2'
|
||||
* @param _set1 the first Pareto set
|
||||
* @param _set2 the second Pareto set
|
||||
*/
|
||||
double operator()(const std::vector < ObjectiveVector > & _set1, const std::vector < ObjectiveVector > & _set2)
|
||||
{
|
||||
// normalization
|
||||
std::vector< ObjectiveVector > set1 = _set1;
|
||||
std::vector< ObjectiveVector > set2= _set2;
|
||||
removeDominated (set1);
|
||||
removeDominated (set2);
|
||||
prenormalize (set1);
|
||||
normalize (set1);
|
||||
normalize (set2);
|
||||
|
||||
// making of PO*
|
||||
std::vector< ObjectiveVector > star; // rotf :-)
|
||||
computeUnion (set1, set2, star);
|
||||
removeDominated (star);
|
||||
|
||||
// making of PO1 U PO*
|
||||
std::vector< ObjectiveVector > union_set1_star; // rotf again ...
|
||||
computeUnion (set1, star, union_set1_star);
|
||||
|
||||
unsigned int C = union_set1_star.size();
|
||||
float omega=0;
|
||||
float entropy=0;
|
||||
|
||||
for (unsigned int i=0 ; i<C ; i++)
|
||||
{
|
||||
unsigned int N_i = howManyInNicheOf (union_set1_star, union_set1_star[i], star.size());
|
||||
unsigned int n_i = howManyInNicheOf (set1, union_set1_star[i], star.size());
|
||||
if (n_i > 0)
|
||||
{
|
||||
omega += 1.0 / N_i;
|
||||
entropy += (float) n_i / (N_i * C) * log (((float) n_i / C) / log (2.0));
|
||||
}
|
||||
}
|
||||
entropy /= - log (omega);
|
||||
entropy *= log (2.0);
|
||||
return entropy;
|
||||
}
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/** vector of min values */
|
||||
std::vector<double> vect_min_val;
|
||||
/** vector of max values */
|
||||
std::vector<double> vect_max_val;
|
||||
/** Functor to compare two objective vectors according to Pareto dominance relation */
|
||||
moeoParetoObjectiveVectorComparator < ObjectiveVector > paretoComparator;
|
||||
|
||||
|
||||
/**
|
||||
* Removes the dominated individuals contained in _f
|
||||
* @param _f a Pareto set
|
||||
*/
|
||||
void removeDominated(std::vector < ObjectiveVector > & _f)
|
||||
{
|
||||
for (unsigned int i=0 ; i<_f.size(); i++)
|
||||
{
|
||||
bool dom = false;
|
||||
for (unsigned int j=0; j<_f.size(); j++)
|
||||
if (i != j && paretoComparator(_f[i],_f[j]))
|
||||
{
|
||||
dom = true;
|
||||
break;
|
||||
}
|
||||
if (dom)
|
||||
{
|
||||
_f[i] = _f.back();
|
||||
_f.pop_back();
|
||||
i--;
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Prenormalization
|
||||
* @param _f a Pareto set
|
||||
*/
|
||||
void prenormalize (const std::vector< ObjectiveVector > & _f)
|
||||
{
|
||||
vect_min_val.clear();
|
||||
vect_max_val.clear();
|
||||
|
||||
for (unsigned int i=0 ; i<ObjectiveVector::nObjectives(); i++)
|
||||
{
|
||||
float min_val = _f.front()[i], max_val = min_val;
|
||||
for (unsigned int j=1 ; j<_f.size(); j++)
|
||||
{
|
||||
if (_f[j][i] < min_val)
|
||||
min_val = _f[j][i];
|
||||
if (_f[j][i]>max_val)
|
||||
max_val = _f[j][i];
|
||||
}
|
||||
vect_min_val.push_back(min_val);
|
||||
vect_max_val.push_back (max_val);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Normalization
|
||||
* @param _f a Pareto set
|
||||
*/
|
||||
void normalize (std::vector< ObjectiveVector > & _f)
|
||||
{
|
||||
for (unsigned int i=0 ; i<ObjectiveVector::nObjectives(); i++)
|
||||
for (unsigned int j=0; j<_f.size(); j++)
|
||||
_f[j][i] = (_f[j][i] - vect_min_val[i]) / (vect_max_val[i] - vect_min_val[i]);
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Computation of the union of _f1 and _f2 in _f
|
||||
* @param _f1 the first Pareto set
|
||||
* @param _f2 the second Pareto set
|
||||
* @param _f the final Pareto set
|
||||
*/
|
||||
void computeUnion(const std::vector< ObjectiveVector > & _f1, const std::vector< ObjectiveVector > & _f2, std::vector< ObjectiveVector > & _f)
|
||||
{
|
||||
_f = _f1 ;
|
||||
for (unsigned int i=0; i<_f2.size(); i++)
|
||||
{
|
||||
bool b = false;
|
||||
for (unsigned int j=0; j<_f1.size(); j ++)
|
||||
if (_f1[j] == _f2[i])
|
||||
{
|
||||
b = true;
|
||||
break;
|
||||
}
|
||||
if (! b)
|
||||
_f.push_back(_f2[i]);
|
||||
}
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* How many in niche
|
||||
*/
|
||||
unsigned int howManyInNicheOf (const std::vector< ObjectiveVector > & _f, const ObjectiveVector & _s, unsigned int _size)
|
||||
{
|
||||
unsigned int n=0;
|
||||
for (unsigned int i=0 ; i<_f.size(); i++)
|
||||
{
|
||||
if (euclidianDistance(_f[i], _s) < (_s.size() / (double) _size))
|
||||
n++;
|
||||
}
|
||||
return n;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* Euclidian distance
|
||||
*/
|
||||
double euclidianDistance (const ObjectiveVector & _set1, const ObjectiveVector & _to, unsigned int _deg = 2)
|
||||
{
|
||||
double dist=0;
|
||||
for (unsigned int i=0; i<_set1.size(); i++)
|
||||
dist += pow(fabs(_set1[i] - _to[i]), (int)_deg);
|
||||
return pow(dist, 1.0 / _deg);
|
||||
}
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOENTROPYMETRIC_H_*/
|
||||
176
trunk/moeo/src/metric/moeoHyperVolumeDifferenceMetric.h
Normal file
176
trunk/moeo/src/metric/moeoHyperVolumeDifferenceMetric.h
Normal file
|
|
@ -0,0 +1,176 @@
|
|||
/*
|
||||
* <moeoHyperVolumeDifferenceMetric.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Jeremie Humeau
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOHYPERVOLUMEDIFFERENCEMETRIC_H_
|
||||
#define MOEOHYPERVOLUMEDIFFERENCEMETRIC_H_
|
||||
|
||||
#include <metric/moeoMetric.h>
|
||||
#include <metric/moeoHyperVolumeMetric.h>
|
||||
|
||||
/**
|
||||
* The contribution metric evaluates the proportion of non-dominated solutions given by a Pareto set relatively to another Pareto set
|
||||
* (Meunier, Talbi, Reininger: 'A multiobjective genetic algorithm for radio network optimization', in Proc. of the 2000 Congress on Evolutionary Computation, IEEE Press, pp. 317-324)
|
||||
*/
|
||||
template < class ObjectiveVector >
|
||||
class moeoHyperVolumeDifferenceMetric : public moeoVectorVsVectorBinaryMetric < ObjectiveVector, double >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Constructor with a coefficient (rho)
|
||||
* @param _normalize allow to normalize data (default true)
|
||||
* @param _rho coefficient to determine the reference point.
|
||||
*/
|
||||
moeoHyperVolumeDifferenceMetric(bool _normalize=true, double _rho=1.1): normalize(_normalize), rho(_rho), ref_point(NULL){
|
||||
bounds.resize(ObjectiveVector::Traits::nObjectives());
|
||||
// initialize bounds in case someone does not want to use them
|
||||
for (unsigned int i=0; i<ObjectiveVector::Traits::nObjectives(); i++)
|
||||
{
|
||||
bounds[i] = eoRealInterval(0,1);
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Constructor with a reference point
|
||||
* @param _normalize allow to normalize data (default true)
|
||||
* @param _ref_point the reference point
|
||||
*/
|
||||
moeoHyperVolumeDifferenceMetric(bool _normalize=true, ObjectiveVector& _ref_point=NULL): normalize(_normalize), rho(0.0), ref_point(_ref_point){
|
||||
bounds.resize(ObjectiveVector::Traits::nObjectives());
|
||||
// initialize bounds in case someone does not want to use them
|
||||
for (unsigned int i=0; i<ObjectiveVector::Traits::nObjectives(); i++)
|
||||
{
|
||||
bounds[i] = eoRealInterval(0,1);
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* calculates and returns the HyperVolume value of a pareto front
|
||||
* @param _set1 the vector contains all objective Vector of the first pareto front
|
||||
* @param _set2 the vector contains all objective Vector of the second pareto front
|
||||
*/
|
||||
double operator()(const std::vector < ObjectiveVector > & _set1, const std::vector < ObjectiveVector > & _set2)
|
||||
{
|
||||
double hypervolume_set1;
|
||||
double hypervolume_set2;
|
||||
|
||||
if(rho >= 1.0){
|
||||
//determine bounds
|
||||
setup(_set1, _set2);
|
||||
//determine reference point
|
||||
for (unsigned int i=0; i<ObjectiveVector::Traits::nObjectives(); i++){
|
||||
if(normalize){
|
||||
if (ObjectiveVector::Traits::minimizing(i))
|
||||
ref_point[i]= rho;
|
||||
else
|
||||
ref_point[i]= 1-rho;
|
||||
}
|
||||
else{
|
||||
if (ObjectiveVector::Traits::minimizing(i))
|
||||
ref_point[i]= bounds[i].maximum() * rho;
|
||||
else
|
||||
ref_point[i]= bounds[i].maximum() * (1-rho);
|
||||
}
|
||||
}
|
||||
//if no normalization, reinit bounds to O..1 for
|
||||
if(!normalize)
|
||||
for (unsigned int i=0; i<ObjectiveVector::Traits::nObjectives(); i++)
|
||||
bounds[i] = eoRealInterval(0,1);
|
||||
|
||||
}
|
||||
else if(normalize)
|
||||
setup(_set1, _set2);
|
||||
|
||||
moeoHyperVolumeMetric <ObjectiveVector> unaryMetric(ref_point, bounds);
|
||||
hypervolume_set1 = unaryMetric(_set1);
|
||||
hypervolume_set2 = unaryMetric(_set2);
|
||||
|
||||
return hypervolume_set1 - hypervolume_set2;
|
||||
}
|
||||
|
||||
/**
|
||||
* getter on bounds
|
||||
* @return bounds
|
||||
*/
|
||||
std::vector < eoRealInterval > getBounds(){
|
||||
return bounds;
|
||||
}
|
||||
|
||||
/**
|
||||
* method caclulate bounds for the normalization
|
||||
* @param _set1 the vector contains all objective Vector of the first pareto front
|
||||
* @param _set2 the vector contains all objective Vector of the second pareto front
|
||||
*/
|
||||
void setup(const std::vector < ObjectiveVector > & _set1, const std::vector < ObjectiveVector > & _set2){
|
||||
if(_set1.size() < 1 || _set2.size() < 1)
|
||||
throw("Error in moeoHyperVolumeUnaryMetric::setup -> argument1: vector<ObjectiveVector> size must be greater than 0");
|
||||
else{
|
||||
double min, max;
|
||||
unsigned int nbObj=ObjectiveVector::Traits::nObjectives();
|
||||
bounds.resize(nbObj);
|
||||
for (unsigned int i=0; i<nbObj; i++){
|
||||
min = _set1[0][i];
|
||||
max = _set1[0][i];
|
||||
for (unsigned int j=1; j<_set1.size(); j++){
|
||||
min = std::min(min, _set1[j][i]);
|
||||
max = std::max(max, _set1[j][i]);
|
||||
}
|
||||
for (unsigned int j=0; j<_set2.size(); j++){
|
||||
min = std::min(min, _set2[j][i]);
|
||||
max = std::max(max, _set2[j][i]);
|
||||
}
|
||||
bounds[i] = eoRealInterval(min, max);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
private:
|
||||
|
||||
/*boolean indicates if data must be normalized or not*/
|
||||
bool normalize;
|
||||
|
||||
double rho;
|
||||
|
||||
/*vectors contains bounds for normalization*/
|
||||
std::vector < eoRealInterval > bounds;
|
||||
|
||||
ObjectiveVector ref_point;
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOHYPERVOLUMEMETRIC_H_*/
|
||||
359
trunk/moeo/src/metric/moeoHyperVolumeMetric.h
Normal file
359
trunk/moeo/src/metric/moeoHyperVolumeMetric.h
Normal file
|
|
@ -0,0 +1,359 @@
|
|||
/*
|
||||
* <moeoHyperVolumeMetric.h>
|
||||
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
|
||||
* (C) OPAC Team, LIFL, 2002-2007
|
||||
*
|
||||
* Jeremie Humeau
|
||||
* Arnaud Liefooghe
|
||||
*
|
||||
* This software is governed by the CeCILL license under French law and
|
||||
* abiding by the rules of distribution of free software. You can use,
|
||||
* modify and/ or redistribute the software under the terms of the CeCILL
|
||||
* license as circulated by CEA, CNRS and INRIA at the following URL
|
||||
* "http://www.cecill.info".
|
||||
*
|
||||
* As a counterpart to the access to the source code and rights to copy,
|
||||
* modify and redistribute granted by the license, users are provided only
|
||||
* with a limited warranty and the software's author, the holder of the
|
||||
* economic rights, and the successive licensors have only limited liability.
|
||||
*
|
||||
* In this respect, the user's attention is drawn to the risks associated
|
||||
* with loading, using, modifying and/or developing or reproducing the
|
||||
* software by the user in light of its specific status of free software,
|
||||
* that may mean that it is complicated to manipulate, and that also
|
||||
* therefore means that it is reserved for developers and experienced
|
||||
* professionals having in-depth computer knowledge. Users are therefore
|
||||
* encouraged to load and test the software's suitability as regards their
|
||||
* requirements in conditions enabling the security of their systems and/or
|
||||
* data to be ensured and, more generally, to use and operate it in the
|
||||
* same conditions as regards security.
|
||||
* The fact that you are presently reading this means that you have had
|
||||
* knowledge of the CeCILL license and that you accept its terms.
|
||||
*
|
||||
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
|
||||
* Contact: paradiseo-help@lists.gforge.inria.fr
|
||||
*
|
||||
*/
|
||||
//-----------------------------------------------------------------------------
|
||||
|
||||
#ifndef MOEOHYPERVOLUMEMETRIC_H_
|
||||
#define MOEOHYPERVOLUMEMETRIC_H_
|
||||
|
||||
#include <metric/moeoMetric.h>
|
||||
|
||||
/**
|
||||
* The contribution metric evaluates the proportion of non-dominated solutions given by a Pareto set relatively to another Pareto set
|
||||
* (Meunier, Talbi, Reininger: 'A multiobjective genetic algorithm for radio network optimization', in Proc. of the 2000 Congress on Evolutionary Computation, IEEE Press, pp. 317-324)
|
||||
*/
|
||||
template < class ObjectiveVector >
|
||||
class moeoHyperVolumeMetric : public moeoVectorUnaryMetric < ObjectiveVector , double >
|
||||
{
|
||||
public:
|
||||
|
||||
/**
|
||||
* Constructor with a coefficient (rho)
|
||||
* @param _normalize allow to normalize data (default true)
|
||||
* @param _rho coefficient to determine the reference point.
|
||||
*/
|
||||
moeoHyperVolumeMetric(bool _normalize=true, double _rho=1.1): normalize(_normalize), rho(_rho), ref_point(NULL){
|
||||
bounds.resize(ObjectiveVector::Traits::nObjectives());
|
||||
// initialize bounds in case someone does not want to use them
|
||||
for (unsigned int i=0; i<ObjectiveVector::Traits::nObjectives(); i++)
|
||||
{
|
||||
bounds[i] = eoRealInterval(0,1);
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Constructor with a reference point
|
||||
* @param _normalize allow to normalize data (default true)
|
||||
* @param _ref_point the reference point
|
||||
*/
|
||||
moeoHyperVolumeMetric(bool _normalize=true, ObjectiveVector& _ref_point=NULL): normalize(_normalize), rho(0.0), ref_point(_ref_point){
|
||||
bounds.resize(ObjectiveVector::Traits::nObjectives());
|
||||
// initialize bounds in case someone does not want to use them
|
||||
for (unsigned int i=0; i<ObjectiveVector::Traits::nObjectives(); i++)
|
||||
{
|
||||
bounds[i] = eoRealInterval(0,1);
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* Constructor with a reference point
|
||||
* @param _ref_point the reference point
|
||||
* @param _bounds bounds value
|
||||
*/
|
||||
moeoHyperVolumeMetric(ObjectiveVector& _ref_point=NULL, std::vector < eoRealInterval >& _bounds=NULL): normalize(false), rho(0.0), ref_point(_ref_point), bounds(_bounds){}
|
||||
|
||||
/**
|
||||
* calculates and returns the HyperVolume value of a pareto front
|
||||
* @param _set the vector contains all objective Vector of pareto front
|
||||
*/
|
||||
double operator()(const std::vector < ObjectiveVector > & _set)
|
||||
{
|
||||
std::vector < std::vector<double> > front;
|
||||
|
||||
//determine the reference point if a coefficient is passed in paremeter
|
||||
if(rho >= 1.0){
|
||||
//determine bounds
|
||||
setup(_set);
|
||||
//determine reference point
|
||||
for (unsigned int i=0; i<ObjectiveVector::Traits::nObjectives(); i++){
|
||||
if(normalize){
|
||||
if (ObjectiveVector::Traits::minimizing(i))
|
||||
ref_point[i]= rho;
|
||||
else
|
||||
ref_point[i]= 1-rho;
|
||||
}
|
||||
else{
|
||||
if (ObjectiveVector::Traits::minimizing(i))
|
||||
ref_point[i]= bounds[i].maximum() * rho;
|
||||
else
|
||||
ref_point[i]= bounds[i].maximum() * (1-rho);
|
||||
}
|
||||
}
|
||||
//if no normalization, reinit bounds to O..1 for
|
||||
if(!normalize)
|
||||
for (unsigned int i=0; i<ObjectiveVector::Traits::nObjectives(); i++)
|
||||
bounds[i] = eoRealInterval(0,1);
|
||||
|
||||
}
|
||||
else if(normalize)
|
||||
setup(_set);
|
||||
front.resize(_set.size());
|
||||
for(unsigned int i=0; i < _set.size(); i++){
|
||||
front[i].resize(ObjectiveVector::Traits::nObjectives());
|
||||
for (unsigned int j=0; j<ObjectiveVector::Traits::nObjectives(); j++){
|
||||
if (ObjectiveVector::Traits::minimizing(j)){
|
||||
front[i][j]=ref_point[j] - ((_set[i][j] - bounds[j].minimum()) /bounds[j].range());
|
||||
}
|
||||
else{
|
||||
front[i][j]=((_set[i][j] - bounds[j].minimum()) /bounds[j].range()) - ref_point[j];
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
return calc_hypervolume(front, front.size(),ObjectiveVector::Traits::nObjectives());
|
||||
}
|
||||
|
||||
/**
|
||||
* getter on bounds
|
||||
* @return bounds
|
||||
*/
|
||||
std::vector < eoRealInterval > getBounds(){
|
||||
return bounds;
|
||||
}
|
||||
|
||||
/**
|
||||
* method caclulate bounds for the normalization
|
||||
* @param _set the vector of objective vectors
|
||||
*/
|
||||
void setup(const std::vector < ObjectiveVector > & _set){
|
||||
if(_set.size() < 1)
|
||||
throw("Error in moeoHyperVolumeUnaryMetric::setup -> argument1: vector<ObjectiveVector> size must be greater than 0");
|
||||
else{
|
||||
double min, max;
|
||||
unsigned int nbObj=ObjectiveVector::Traits::nObjectives();
|
||||
bounds.resize(nbObj);
|
||||
for (unsigned int i=0; i<nbObj; i++){
|
||||
min = _set[0][i];
|
||||
max = _set[0][i];
|
||||
for (unsigned int j=1; j<_set.size(); j++){
|
||||
min = std::min(min, _set[j][i]);
|
||||
max = std::max(max, _set[j][i]);
|
||||
}
|
||||
bounds[i] = eoRealInterval(min, max);
|
||||
}
|
||||
}
|
||||
}
|
||||
|
||||
/**
|
||||
* method calculate if a point dominates another one regarding the x first objective
|
||||
* @param _point1 a vector of distances
|
||||
* @param _point2 a vector of distances
|
||||
* @param _no_objectives a number of objectives
|
||||
* @return true if '_point1' dominates '_point2' with respect to the first 'no_objectives' objectives
|
||||
*/
|
||||
bool dominates(std::vector<double>& _point1, std::vector<double>& _point2, unsigned int _no_objectives){
|
||||
unsigned int i;
|
||||
bool better_in_any_objective = false;
|
||||
bool worse_in_any_objective = false;
|
||||
|
||||
for(i=0; i < _no_objectives && !worse_in_any_objective; i++){
|
||||
if(_point1[i] > _point2[i])
|
||||
better_in_any_objective = true;
|
||||
else if(_point1[i] < _point2[i])
|
||||
worse_in_any_objective = true;
|
||||
}
|
||||
//_point1 dominates _point2 if it is better than _point2 on a objective and if it is never worse in any other objectives
|
||||
return(!worse_in_any_objective && better_in_any_objective);
|
||||
|
||||
}
|
||||
|
||||
/**
|
||||
* swap two elements of a vector
|
||||
* @param _front the vector
|
||||
* @param _i index of the first element to swap
|
||||
* @param _j index of the second element to swap
|
||||
*/
|
||||
void swap(std::vector< std::vector<double> >& _front, unsigned int _i, unsigned int _j){
|
||||
std::vector<double> tmp;
|
||||
tmp=_front[_i];
|
||||
_front[_i]=_front[_j];
|
||||
_front[_j]=tmp;
|
||||
//another way (don't work on visual studio)
|
||||
// _front.push_back(_front[_i]);
|
||||
// _front[_i]= _front[_j];
|
||||
// _front[_j]=_front.back();
|
||||
// _front.pop_back();
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* collect all nondominated points regarding the first '_no_objectives' objectives (dominated points are stored at the end of _front)
|
||||
* @param _front the front
|
||||
* @param _no_points the number of points of the front to consider (index 0 to _no_points are considered)
|
||||
* @param _no_objectives the number of objective to consider
|
||||
* @return the index of the last nondominated point
|
||||
*/
|
||||
unsigned int filter_nondominated_set( std::vector < std::vector< double > >& _front, unsigned int _no_points, unsigned int _no_objectives){
|
||||
unsigned int i,j,n;
|
||||
|
||||
n=_no_points;
|
||||
i=0;
|
||||
while(i < n){
|
||||
j=i+1;
|
||||
while(j < n){
|
||||
//if a point 'A' (index i) dominates another one 'B' (index j), swap 'B' with the point of index n-1
|
||||
if( dominates(_front[i], _front[j], _no_objectives)){
|
||||
n--;
|
||||
swap(_front, j, n);
|
||||
}
|
||||
//if a point 'B'(index j) dominates another one 'A' (index i), swap 'A' with the point of index n-1
|
||||
else if( dominates(_front[j], _front[i], _no_objectives)){
|
||||
n--;
|
||||
swap(_front, i, n);
|
||||
i--;
|
||||
break;
|
||||
}
|
||||
else
|
||||
j++;
|
||||
}
|
||||
i++;
|
||||
}
|
||||
return n;
|
||||
}
|
||||
|
||||
/**
|
||||
* find a minimum value
|
||||
* @param _front the front
|
||||
* @param _no_points the number of points of the front to consider (index 0 to _no_points are considered)
|
||||
* @param _objective the objective to consider
|
||||
* @return the minimum value regarding dimension '_objective' consider points O to _no_points in '_front'
|
||||
*/
|
||||
double surface_unchanged_to(std::vector < std::vector< double > >& _front, unsigned int _no_points, unsigned int _objective){
|
||||
unsigned int i;
|
||||
double min, value;
|
||||
|
||||
if(_no_points < 1)
|
||||
throw("Error in moeoHyperVolumeUnaryMetric::surface_unchanged_to -> argument2: _no_points must be greater than 0");
|
||||
min = _front[0][_objective];
|
||||
|
||||
for(i=1; i < _no_points; i++){
|
||||
value = _front[i][_objective];
|
||||
if(value < min)
|
||||
min = value;
|
||||
}
|
||||
return min;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* remove all points having a value <= 'threshold' regarding the dimension 'objective', only points of index 0 to _no_points are considered.
|
||||
* points removed are swap at the end of the front.
|
||||
* @param _front the front
|
||||
* @param _no_points the number of points of the front to consider (index 0 to _no_points are considered)
|
||||
* @param _objective the objective to consider
|
||||
* @param _threshold the threshold
|
||||
* @return index of the last points of '_front' greater than the threshold
|
||||
*/
|
||||
unsigned int reduce_nondominated_set(std::vector < std::vector< double > >& _front, unsigned int _no_points, unsigned int _objective, double _threshold){
|
||||
unsigned int i,n ;
|
||||
|
||||
n=_no_points;
|
||||
for(i=0; i < n ; i++)
|
||||
if(_front[i][_objective] <= _threshold){
|
||||
n--;
|
||||
swap(_front, i, n);
|
||||
i--; //ATTENTION I had this to reconsider the point copied to index i (it can be useless verify algorythimic in calc_hypervolume)
|
||||
}
|
||||
|
||||
return n;
|
||||
}
|
||||
|
||||
|
||||
/**
|
||||
* calculate hypervolume of the front (data are redrafted before)
|
||||
* @param _front the front
|
||||
* @param _no_points the number of points of the front to consider (index 0 to _no_points are considered)
|
||||
* @param _no_objectives the number of objective to consider
|
||||
* @return the hypervolume of the front
|
||||
*/
|
||||
double calc_hypervolume(std::vector < std::vector< double > >& _front, unsigned int _no_points, unsigned int _no_objectives){
|
||||
unsigned int n;
|
||||
double volume, distance;
|
||||
|
||||
volume=0;
|
||||
distance=0;
|
||||
n=_no_points;
|
||||
while(n > 0){
|
||||
unsigned int no_nondominated_points;
|
||||
double temp_vol, temp_dist;
|
||||
|
||||
//get back the index of non dominated points of the front regarding the first "_nb_objectives - 1" objectives
|
||||
//So one dimension is not determinante for the dominance
|
||||
no_nondominated_points = filter_nondominated_set(_front, n, _no_objectives - 1);
|
||||
|
||||
temp_vol=0;
|
||||
|
||||
//if there are less than 3 objectifs take the fisrt objectif of the first point of front to begin computation of hypervolume
|
||||
if(_no_objectives < 3){
|
||||
if(_no_objectives < 1)
|
||||
throw("Error in moeoHyperVolumeUnaryMetric::calc_hypervolume -> argument3: _no_objectives must be greater than 0");
|
||||
temp_vol=_front[0][0];
|
||||
}
|
||||
//else if there at least 3 objectives, a recursive computation of hypervolume starts with _no_objectives -1 on the filter_nondominated_set calculating previously.
|
||||
else
|
||||
temp_vol= calc_hypervolume(_front, no_nondominated_points, _no_objectives - 1);
|
||||
|
||||
//search the next minimum distance on the dimension _no_objectives -1
|
||||
temp_dist = surface_unchanged_to(_front, n, _no_objectives - 1);
|
||||
//calculate the area
|
||||
volume+= temp_vol * (temp_dist - distance);
|
||||
//change distance to have the good lenght on next step
|
||||
distance= temp_dist;
|
||||
//remove all points <= distance on dimension _no_objectives
|
||||
n=reduce_nondominated_set(_front, n , _no_objectives - 1, distance);
|
||||
}
|
||||
return volume;
|
||||
}
|
||||
|
||||
|
||||
|
||||
private:
|
||||
|
||||
/*boolean indicates if data must be normalized or not*/
|
||||
bool normalize;
|
||||
|
||||
double rho;
|
||||
|
||||
ObjectiveVector ref_point;
|
||||
|
||||
/*vectors contains bounds for normalization*/
|
||||
std::vector < eoRealInterval > bounds;
|
||||
|
||||
|
||||
|
||||
};
|
||||
|
||||
#endif /*MOEOHYPERVOLUMEMETRIC_H_*/
|
||||
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