adding a lot of includes

eo/app/gprop/gprop.cc

@@ -2,18 +2,21 @@
 // gprop
 //-----------------------------------------------------------------------------
 
-#include <stdlib.h>         // EXIT_SUCCESS EXIT_FAILURE
-#include <stdexcept>        // exception 
-#include <iostream>         // cerr cout
-#include <fstream>          // ifstream
-#include <string>           // string
-#include <utils/eoParser.h> // eoParser
-#include <eoPop.h>          // eoPop
-#include <eoGenContinue.h>  // eoGenContinue
-#include <eoProportional.h> // eoProportional
-#include <eoStochTournament.h> // eoStochTournament
-#include <eoSGA.h>          // eoSGA
-#include "gprop.h"          // Chrom eoChromInit eoChromMutation eoChromXover eoChromEvaluator
+#include <stdlib.h>                // EXIT_SUCCESS EXIT_FAILURE
+#include <stdexcept>               // exception 
+#include <iostream>                // cerr cout
+#include <fstream>                 // ifstream
+#include <string>                  // string
+#include <utils/eoParser.h>        // eoParser
+#include <eoPop.h>                 // eoPop
+#include <eoGenContinue.h>         // eoGenContinue
+#include <eoStochTournament.h>     // eoStochTournament
+#include <eoSGA.h>                 // eoSGA
+#include <eoGenContinue.h>         // eoGenContinue
+#include <utils/eoCheckPoint.h>    // eoCheckPoint
+#include <utils/eoStat.h>          // eoSecondMomentStats
+#include <utils/eoStdoutMonitor.h> // eoStdoutMonitor
+#include "gprop.h"                 // Chrom eoChromInit eoChromMutation eoChromXover eoChromEvaluator
 
 //-----------------------------------------------------------------------------
 // global variables
@@ -120,8 +123,6 @@ void load_file(mlp::set& set, const string& ext)
 
 void ga()
 {
-  eoGenContinue<Chrom> continuator(generations.value());
-
   // create population
   eoInitChrom init;
   eoPop<Chrom> pop(pop_size.value(), init);
@@ -137,13 +138,28 @@ void ga()
   // genetic operators
   eoChromMutation mutation(generations);
   eoChromXover xover;
+
+  // stop condition
+  eoGenContinue<Chrom> continuator(generations.value());
+
+  // checkpoint
+  eoCheckPoint<Chrom> checkpoint(continuator);
+  
+  // monitor
+  eoStdoutMonitor monitor;
+  checkpoint.add(monitor);
+  
+  // statistics
+  eoSecondMomentStats<Chrom> stats;
+  checkpoint.add(stats);
+  monitor.add(stats);
   
   // genetic algorithm
   eoSGA<Chrom> sga(select,
 		   xover, xover_rate.value(), 
 		   mutation, mut_rate.value(), 
 		   evaluator, 
-		   continuator);
+		   checkpoint);
  
   cout << pop << endl;
   

eo/configure.in

@@ -34,5 +34,5 @@ AC_TYPE_SIZE_T
 dnl Checks for library functions.
 AC_CHECK_FUNCS(select)
 
-AC_OUTPUT(src/obsolete/Makefile doc/Makefile src/Makefile src/utils/Makefile src/other/Makefile win/Makefile src/gp/Makefile src/es/Makefile src/ga/Makefile test/Makefile contrib/Makefile Makefile app/Makefile app/gprop/Makefile)
+AC_OUTPUT(src/obsolete/Makefile doc/Makefile src/Makefile src/utils/Makefile src/other/Makefile win/Makefile src/gp/Makefile src/es/Makefile src/ga/Makefile test/Makefile contrib/Makefile Makefile app/Makefile app/gprop/Makefile app/mastermind/Makefile)
 

eo/src/eoSelectPerc.h

@@ -52,21 +52,21 @@ class eoSelectPerc : public eoSelect<EOT>
      @param _source the source population
      @param _dest  the resulting population (size of this population is the number of times eoSelectOne is called. It empties the destination and adds the selection into it)
      */
-     virtual void operator()(const eoPop<EOT>& _source, eoPop<EOT>& _dest)
-     {
-         size_t target = static_cast<size_t>(floor(rate * _source.size()));
-
-         _dest.resize(target);
-
-         select.setup(_source);
-
-         for (size_t i = 0; i < _dest.size(); ++i)
-             _dest[i] = select(_source);
-     }
-
- private :
-   eoSelectOne<EOT>& select;
-   float rate;
+  virtual void operator()(const eoPop<EOT>& _source, eoPop<EOT>& _dest)
+  {
+    size_t target = static_cast<size_t>(floor(rate * _source.size()));
+    
+    _dest.resize(target);
+    
+    select.setup(_source);
+    
+    for (size_t i = 0; i < _dest.size(); ++i)
+      _dest[i] = select(_source);
+  }
+  
+private :
+  eoSelectOne<EOT>& select;
+  float rate;
 };
 
 #endif

eo/src/eoStochTournament.h

@@ -28,9 +28,10 @@
 
 //-----------------------------------------------------------------------------
 
-#include <functional>  // 
-#include <numeric>     // accumulate
-#include <utils/eoRNG.h>
+#include <functional>
+#include <numeric>           // accumulate
+#include <eoSelectOne.h>     // eoSelectOne
+#include <utils/selectors.h> // stochastic_tournament
 
 //-----------------------------------------------------------------------------
 /** eoStochTournament: a selection method that selects ONE individual by

eo/src/utils/eoCheckPoint.h

@@ -28,6 +28,7 @@
 #define _eoCheckPoint_h
 
 #include <eoContinue.h>
+#include <utils/eoUpdater.h>
 
 template <class EOT> class eoStatBase;
 template <class EOT> class eoSortedStatBase;