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/*
* <make_checkpoint_moeo.h>
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
* (C) OPAC Team, LIFL, 2002-2007
*
* Arnaud Liefooghe
*
* This software is governed by the CeCILL license under French law and
* abiding by the rules of distribution of free software. You can use,
* modify and/ or redistribute the software under the terms of the CeCILL
* license as circulated by CEA, CNRS and INRIA at the following URL
* "http://www.cecill.info".
*
* As a counterpart to the access to the source code and rights to copy,
* modify and redistribute granted by the license, users are provided only
* with a limited warranty and the software's author, the holder of the
* economic rights, and the successive licensors have only limited liability.
*
* In this respect, the user's attention is drawn to the risks associated
* with loading, using, modifying and/or developing or reproducing the
* software by the user in light of its specific status of free software,
* that may mean that it is complicated to manipulate, and that also
* therefore means that it is reserved for developers and experienced
* professionals having in-depth computer knowledge. Users are therefore
* encouraged to load and test the software's suitability as regards their
* requirements in conditions enabling the security of their systems and/or
* data to be ensured and, more generally, to use and operate it in the
* same conditions as regards security.
* The fact that you are presently reading this means that you have had
* knowledge of the CeCILL license and that you accept its terms.
*
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
* Contact: paradiseo-help@lists.gforge.inria.fr
*
*/
//-----------------------------------------------------------------------------
#ifndef MAKE_CHECKPOINT_MOEO_H_
#define MAKE_CHECKPOINT_MOEO_H_
#include <stdlib.h>
#include <sstream>
#include <eoContinue.h>
#include <eoEvalFuncCounter.h>
#include <utils/checkpointing>
#include <utils/selectors.h>
#include <utils/eoParser.h>
#include <utils/eoState.h>
#include <metric/moeoContributionMetric.h>
#include <metric/moeoEntropyMetric.h>
#include <utils/moeoArchiveUpdater.h>
#include <utils/moeoArchiveObjectiveVectorSavingUpdater.h>
#include <utils/moeoBinaryMetricSavingUpdater.h>
bool testDirRes(std::string _dirName, bool _erase);
/**
* This functions allows to build an eoCheckPoint for multi-objective optimization from the parser (partly taken from make_checkpoint_pareto.h)
* @param _parser the parser
* @param _state to store allocated objects
* @param _eval the funtions evaluator
* @param _continue the stopping crietria
* @param _pop the population
* @param _archive the archive of non-dominated solutions
*/
template < class MOEOT >
eoCheckPoint < MOEOT > & do_make_checkpoint_moeo (eoParser & _parser, eoState & _state, eoPopEvalFunc < MOEOT > & _eval, eoContinue < MOEOT > & _continue, eoPop < MOEOT > & _pop, moeoArchive < MOEOT > & _archive)
{
eoCheckPoint < MOEOT > & checkpoint = _state.storeFunctor(new eoCheckPoint < MOEOT > (_continue));
/* the objective vector type */
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
///////////////////
// Counters
//////////////////
// is nb Eval to be used as counter?
//bool useEval = _parser.getORcreateParam(true, "useEval", "Use nb of eval. as counter (vs nb of gen.)", '\0', "Output").value();
// Create anyway a generation-counter parameter
eoValueParam<unsigned int> *generationCounter = new eoValueParam<unsigned int>(0, "Gen.");
// Create an incrementor (sub-class of eoUpdater).
eoIncrementor<unsigned int> & increment = _state.storeFunctor( new eoIncrementor<unsigned int>(generationCounter->value()) );
// Add it to the checkpoint
checkpoint.add(increment);
// dir for DISK output
std::string & dirName = _parser.getORcreateParam(std::string("Res"), "resDir", "Directory to store DISK outputs", '\0', "Output").value();
// shoudl we empty it if exists
eoValueParam<bool>& eraseParam = _parser.getORcreateParam(true, "eraseDir", "erase files in dirName if any", '\0', "Output");
bool dirOK = false; // not tested yet
// Dump of the whole population
//-----------------------------
bool printPop = _parser.getORcreateParam(false, "printPop", "Print sorted pop. every gen.", '\0', "Output").value();
eoSortedPopStat<MOEOT> * popStat;
if ( printPop ) // we do want pop dump
{
popStat = & _state.storeFunctor(new eoSortedPopStat<MOEOT>);
checkpoint.add(*popStat);
}
//////////////////////////////////
// State savers
//////////////////////////////
// feed the state to state savers
// save state every N generation
eoValueParam<unsigned int>& saveFrequencyParam = _parser.createParam((unsigned int)(0), "saveFrequency", "Save every F generation (0 = only final state, absent = never)", '\0', "Persistence" );
if (_parser.isItThere(saveFrequencyParam))
{
// first make sure dirName is OK
if (! dirOK )
dirOK = testDirRes(dirName, eraseParam.value()); // TRUE
unsigned int freq = (saveFrequencyParam.value()>0 ? saveFrequencyParam.value() : UINT_MAX );
#ifdef _MSVC
std::string stmp = dirName + "\generations";
#else
std::string stmp = dirName + "/generations";
#endif
eoCountedStateSaver *stateSaver1 = new eoCountedStateSaver(freq, _state, stmp);
_state.storeFunctor(stateSaver1);
checkpoint.add(*stateSaver1);
}
// save state every T seconds
eoValueParam<unsigned int>& saveTimeIntervalParam = _parser.getORcreateParam((unsigned int)(0), "saveTimeInterval", "Save every T seconds (0 or absent = never)", '\0',"Persistence" );
if (_parser.isItThere(saveTimeIntervalParam) && saveTimeIntervalParam.value()>0)
{
// first make sure dirName is OK
if (! dirOK )
dirOK = testDirRes(dirName, eraseParam.value()); // TRUE
#ifdef _MSVC
std::string stmp = dirName + "\time";
#else
std::string stmp = dirName + "/time";
#endif
eoTimedStateSaver *stateSaver2 = new eoTimedStateSaver(saveTimeIntervalParam.value(), _state, stmp);
_state.storeFunctor(stateSaver2);
checkpoint.add(*stateSaver2);
}
///////////////////
// Archive
//////////////////
// update the archive every generation
bool updateArch = _parser.getORcreateParam(true, "updateArch", "Update the archive at each gen.", '\0', "Evolution Engine").value();
if (updateArch)
{
moeoArchiveUpdater < MOEOT > * updater = new moeoArchiveUpdater < MOEOT > (_archive, _pop);
_state.storeFunctor(updater);
checkpoint.add(*updater);
}
// store the objective vectors contained in the archive every generation
bool storeArch = _parser.getORcreateParam(false, "storeArch", "Store the archive's objective vectors at each gen.", '\0', "Output").value();
if (storeArch)
{
if (! dirOK )
dirOK = testDirRes(dirName, eraseParam.value()); // TRUE
#ifdef _MSVC
std::string stmp = dirName + "\arch";
#else
std::string stmp = dirName + "/arch";
#endif
moeoArchiveObjectiveVectorSavingUpdater < MOEOT > * save_updater = new moeoArchiveObjectiveVectorSavingUpdater < MOEOT > (_archive, stmp);
_state.storeFunctor(save_updater);
checkpoint.add(*save_updater);
}
// store the contribution of the non-dominated solutions
bool cont = _parser.getORcreateParam(false, "contribution", "Store the contribution of the archive at each gen.", '\0', "Output").value();
if (cont)
{
if (! dirOK )
dirOK = testDirRes(dirName, eraseParam.value()); // TRUE
#ifdef _MSVC
std::string stmp = dirName + "\contribution";
#else
std::string stmp = dirName + "/contribution";
#endif
moeoContributionMetric < ObjectiveVector > * contribution = new moeoContributionMetric < ObjectiveVector >;
moeoBinaryMetricSavingUpdater < MOEOT > * contribution_updater = new moeoBinaryMetricSavingUpdater < MOEOT > (*contribution, _archive, stmp);
_state.storeFunctor(contribution_updater);
checkpoint.add(*contribution_updater);
}
// store the entropy of the non-dominated solutions
bool ent = _parser.getORcreateParam(false, "entropy", "Store the entropy of the archive at each gen.", '\0', "Output").value();
if (ent)
{
if (! dirOK )
dirOK = testDirRes(dirName, eraseParam.value()); // TRUE
#ifdef _MSVC
std::string stmp = dirName + "\entropy";
#else
std::string stmp = dirName + "/entropy";
#endif
moeoEntropyMetric < ObjectiveVector > * entropy = new moeoEntropyMetric < ObjectiveVector >;
moeoBinaryMetricSavingUpdater < MOEOT > * entropy_updater = new moeoBinaryMetricSavingUpdater < MOEOT > (*entropy, _archive, stmp);
_state.storeFunctor(entropy_updater);
checkpoint.add(*entropy_updater);
}
// and that's it for the (control and) output
return checkpoint;
}
#endif /*MAKE_CHECKPOINT_MOEO_H_*/

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/*
* <make_continue_moeo.h>
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
* (C) OPAC Team, LIFL, 2002-2007
*
* Arnaud Liefooghe
*
* This software is governed by the CeCILL license under French law and
* abiding by the rules of distribution of free software. You can use,
* modify and/ or redistribute the software under the terms of the CeCILL
* license as circulated by CEA, CNRS and INRIA at the following URL
* "http://www.cecill.info".
*
* As a counterpart to the access to the source code and rights to copy,
* modify and redistribute granted by the license, users are provided only
* with a limited warranty and the software's author, the holder of the
* economic rights, and the successive licensors have only limited liability.
*
* In this respect, the user's attention is drawn to the risks associated
* with loading, using, modifying and/or developing or reproducing the
* software by the user in light of its specific status of free software,
* that may mean that it is complicated to manipulate, and that also
* therefore means that it is reserved for developers and experienced
* professionals having in-depth computer knowledge. Users are therefore
* encouraged to load and test the software's suitability as regards their
* requirements in conditions enabling the security of their systems and/or
* data to be ensured and, more generally, to use and operate it in the
* same conditions as regards security.
* The fact that you are presently reading this means that you have had
* knowledge of the CeCILL license and that you accept its terms.
*
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
* Contact: paradiseo-help@lists.gforge.inria.fr
*
*/
//-----------------------------------------------------------------------------
#ifndef MAKE_CONTINUE_MOEO_H_
#define MAKE_CONTINUE_MOEO_H_
#include <eoCombinedContinue.h>
#include <eoGenContinue.h>
#include <eoEvalContinue.h>
#include <eoFitContinue.h>
#include <eoTimeContinue.h>
#ifndef _MSC_VER
#include <eoCtrlCContinue.h>
#endif
#include <utils/eoParser.h>
#include <utils/eoState.h>
/**
* Helper function
* @param _combined the eoCombinedContinue object
* @param _cont the eoContinue to add
*/
template <class MOEOT>
eoCombinedContinue<MOEOT> * make_combinedContinue(eoCombinedContinue<MOEOT> *_combined, eoContinue<MOEOT> *_cont)
{
if (_combined) // already exists
_combined->add(*_cont);
else
_combined = new eoCombinedContinue<MOEOT>(*_cont);
return _combined;
}
/**
* This functions allows to build a eoContinue for multi-objective optimization from the parser (partly taken from make_continue_pareto.h)
* @param _parser the parser
* @param _state to store allocated objects
* @param _eval the funtions evaluator
*/
template <class MOEOT>
eoContinue<MOEOT> & do_make_continue_moeo(eoParser& _parser, eoState& _state, eoPopEvalFunc<MOEOT> & _eval)
{
// the combined continue - to be filled
eoCombinedContinue<MOEOT> *continuator = NULL;
// First the eoGenContinue - need a default value so you can run blind
// but we also need to be able to avoid it <--> 0
eoValueParam<unsigned int>& maxGenParam = _parser.createParam((unsigned int)(100), "maxGen", "Maximum number of generations (0 = none)",'G',"Stopping criterion");
if (maxGenParam.value()) // positive: -> define and store
{
eoGenContinue<MOEOT> *genCont = new eoGenContinue<MOEOT>(maxGenParam.value());
_state.storeFunctor(genCont);
// and "add" to combined
continuator = make_combinedContinue<MOEOT>(continuator, genCont);
}
// maxEval
eoValueParam<unsigned long>& maxEvalParam = _parser.getORcreateParam((unsigned long)(0), "maxEval", "Maximum number of evaluations (0 = none)", 'E', "Stopping criterion");
/* if (maxEvalParam.value())
{
eoEvalContinue<MOEOT> *evalCont = new eoEvalContinue<MOEOT>(_eval, maxEvalParam.value());
_state.storeFunctor(evalCont);
// and "add" to combined
continuator = make_combinedContinue<MOEOT>(continuator, evalCont);
}*/
// maxTime
eoValueParam<unsigned long>& maxTimeParam = _parser.getORcreateParam((unsigned long)(0), "maxTime", "Maximum running time in seconds (0 = none)", 'T', "Stopping criterion");
if (maxTimeParam.value()) // positive: -> define and store
{
eoTimeContinue<MOEOT> *timeCont = new eoTimeContinue<MOEOT>(maxTimeParam.value());
_state.storeFunctor(timeCont);
// and "add" to combined
continuator = make_combinedContinue<MOEOT>(continuator, timeCont);
}
// CtrlC
#ifndef _MSC_VER
// the CtrlC interception (Linux only I'm afraid)
eoCtrlCContinue<MOEOT> *ctrlCCont;
eoValueParam<bool>& ctrlCParam = _parser.createParam(true, "CtrlC", "Terminate current generation upon Ctrl C",'C', "Stopping criterion");
if (_parser.isItThere(ctrlCParam))
{
ctrlCCont = new eoCtrlCContinue<MOEOT>;
// store
_state.storeFunctor(ctrlCCont);
// add to combinedContinue
continuator = make_combinedContinue<MOEOT>(continuator, ctrlCCont);
}
#endif
// now check that there is at least one!
if (!continuator)
throw std::runtime_error("You MUST provide a stopping criterion");
// OK, it's there: store in the eoState
_state.storeFunctor(continuator);
// and return
return *continuator;
}
#endif /*MAKE_CONTINUE_MOEO_H_*/

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/*
* <make_ea_moeo.h>
* Copyright (C) DOLPHIN Project-Team, INRIA Futurs, 2006-2007
* (C) OPAC Team, LIFL, 2002-2007
*
* Arnaud Liefooghe
*
* This software is governed by the CeCILL license under French law and
* abiding by the rules of distribution of free software. You can use,
* modify and/ or redistribute the software under the terms of the CeCILL
* license as circulated by CEA, CNRS and INRIA at the following URL
* "http://www.cecill.info".
*
* As a counterpart to the access to the source code and rights to copy,
* modify and redistribute granted by the license, users are provided only
* with a limited warranty and the software's author, the holder of the
* economic rights, and the successive licensors have only limited liability.
*
* In this respect, the user's attention is drawn to the risks associated
* with loading, using, modifying and/or developing or reproducing the
* software by the user in light of its specific status of free software,
* that may mean that it is complicated to manipulate, and that also
* therefore means that it is reserved for developers and experienced
* professionals having in-depth computer knowledge. Users are therefore
* encouraged to load and test the software's suitability as regards their
* requirements in conditions enabling the security of their systems and/or
* data to be ensured and, more generally, to use and operate it in the
* same conditions as regards security.
* The fact that you are presently reading this means that you have had
* knowledge of the CeCILL license and that you accept its terms.
*
* ParadisEO WebSite : http://paradiseo.gforge.inria.fr
* Contact: paradiseo-help@lists.gforge.inria.fr
*
*/
//-----------------------------------------------------------------------------
#ifndef MAKE_EA_MOEO_H_
#define MAKE_EA_MOEO_H_
#include <stdlib.h>
#include <eoContinue.h>
#include <eoEvalFunc.h>
#include <eoGeneralBreeder.h>
#include <eoGenOp.h>
#include <utils/eoParser.h>
#include <utils/eoState.h>
#include <algo/moeoEA.h>
#include <algo/moeoEasyEA.h>
#include <archive/moeoArchive.h>
#include <comparator/moeoAggregativeComparator.h>
#include <comparator/moeoComparator.h>
#include <comparator/moeoDiversityThenFitnessComparator.h>
#include <comparator/moeoFitnessThenDiversityComparator.h>
#include <diversity/moeoDiversityAssignment.h>
#include <diversity/moeoDummyDiversityAssignment.h>
#include <diversity/moeoFrontByFrontCrowdingDiversityAssignment.h>
#include <diversity/moeoFrontByFrontSharingDiversityAssignment.h>
#include <fitness/moeoDummyFitnessAssignment.h>
#include <fitness/moeoExpBinaryIndicatorBasedFitnessAssignment.h>
#include <fitness/moeoFastNonDominatedSortingFitnessAssignment.h>
#include <fitness/moeoFitnessAssignment.h>
#include <metric/moeoAdditiveEpsilonBinaryMetric.h>
#include <metric/moeoHypervolumeBinaryMetric.h>
#include <metric/moeoNormalizedSolutionVsSolutionBinaryMetric.h>
#include <replacement/moeoElitistReplacement.h>
#include <replacement/moeoEnvironmentalReplacement.h>
#include <replacement/moeoGenerationalReplacement.h>
#include <replacement/moeoReplacement.h>
#include <selection/moeoDetTournamentSelect.h>
#include <selection/moeoRandomSelect.h>
#include <selection/moeoStochTournamentSelect.h>
#include <selection/moeoSelectOne.h>
#include <selection/moeoSelectors.h>
/**
* This functions allows to build a moeoEA from the parser
* @param _parser the parser
* @param _state to store allocated objects
* @param _eval the funtions evaluator
* @param _continue the stopping crietria
* @param _op the variation operators
* @param _archive the archive of non-dominated solutions
*/
template < class MOEOT >
moeoEA < MOEOT > & do_make_ea_moeo(eoParser & _parser, eoState & _state, eoPopEvalFunc < MOEOT > & _eval, eoContinue < MOEOT > & _continue, eoGenOp < MOEOT > & _op, moeoArchive < MOEOT > & _archive)
{
/* the objective vector type */
typedef typename MOEOT::ObjectiveVector ObjectiveVector;
/* the fitness assignment strategy */
std::string & fitnessParam = _parser.createParam(std::string("FastNonDominatedSorting"), "fitness",
"Fitness assignment scheme: Dummy, FastNonDominatedSorting or IndicatorBased", 'F',
"Evolution Engine").value();
std::string & indicatorParam = _parser.createParam(std::string("Epsilon"), "indicator",
"Binary indicator for IndicatorBased: Epsilon, Hypervolume", 'i',
"Evolution Engine").value();
double rho = _parser.createParam(1.1, "rho", "reference point for the hypervolume indicator", 'r',
"Evolution Engine").value();
double kappa = _parser.createParam(0.05, "kappa", "Scaling factor kappa for IndicatorBased", 'k',
"Evolution Engine").value();
moeoFitnessAssignment < MOEOT > * fitnessAssignment;
if (fitnessParam == std::string("Dummy"))
{
fitnessAssignment = new moeoDummyFitnessAssignment < MOEOT> ();
}
else if (fitnessParam == std::string("FastNonDominatedSorting"))
{
fitnessAssignment = new moeoFastNonDominatedSortingFitnessAssignment < MOEOT> ();
}
else if (fitnessParam == std::string("IndicatorBased"))
{
// metric
moeoNormalizedSolutionVsSolutionBinaryMetric < ObjectiveVector, double > *metric;
if (indicatorParam == std::string("Epsilon"))
{
metric = new moeoAdditiveEpsilonBinaryMetric < ObjectiveVector >;
}
else if (indicatorParam == std::string("Hypervolume"))
{
metric = new moeoHypervolumeBinaryMetric < ObjectiveVector > (rho);
}
else
{
std::string stmp = std::string("Invalid binary quality indicator: ") + indicatorParam;
throw std::runtime_error(stmp.c_str());
}
fitnessAssignment = new moeoExpBinaryIndicatorBasedFitnessAssignment < MOEOT > (*metric, kappa);
}
else
{
std::string stmp = std::string("Invalid fitness assignment strategy: ") + fitnessParam;
throw std::runtime_error(stmp.c_str());
}
_state.storeFunctor(fitnessAssignment);
/* the diversity assignment strategy */
eoValueParam<eoParamParamType> & diversityParam = _parser.createParam(eoParamParamType("Dummy"), "diversity",
"Diversity assignment scheme: Dummy, Sharing(nicheSize) or Crowding", 'D', "Evolution Engine");
eoParamParamType & diversityParamValue = diversityParam.value();
moeoDiversityAssignment < MOEOT > * diversityAssignment;
if (diversityParamValue.first == std::string("Dummy"))
{
diversityAssignment = new moeoDummyDiversityAssignment < MOEOT> ();
}
else if (diversityParamValue.first == std::string("Sharing"))
{
double nicheSize;
if (!diversityParamValue.second.size()) // no parameter added
{
std::cerr << "WARNING, no niche size given for Sharing, using 0.5" << std::endl;
nicheSize = 0.5;
diversityParamValue.second.push_back(std::string("0.5"));
}
else
{
nicheSize = atoi(diversityParamValue.second[0].c_str());
}
diversityAssignment = new moeoFrontByFrontSharingDiversityAssignment < MOEOT> (nicheSize);
}
else if (diversityParamValue.first == std::string("Crowding"))
{
diversityAssignment = new moeoFrontByFrontCrowdingDiversityAssignment < MOEOT> ();
}
else
{
std::string stmp = std::string("Invalid diversity assignment strategy: ") + diversityParamValue.first;
throw std::runtime_error(stmp.c_str());
}
_state.storeFunctor(diversityAssignment);
/* the comparator strategy */
std::string & comparatorParam = _parser.createParam(std::string("FitnessThenDiversity"), "comparator",
"Comparator scheme: FitnessThenDiversity, DiversityThenFitness or Aggregative", 'C', "Evolution Engine").value();
moeoComparator < MOEOT > * comparator;
if (comparatorParam == std::string("FitnessThenDiversity"))
{
comparator = new moeoFitnessThenDiversityComparator < MOEOT> ();
}
else if (comparatorParam == std::string("DiversityThenFitness"))
{
comparator = new moeoDiversityThenFitnessComparator < MOEOT> ();
}
else if (comparatorParam == std::string("Aggregative"))
{
comparator = new moeoAggregativeComparator < MOEOT> ();
}
else
{
std::string stmp = std::string("Invalid comparator strategy: ") + comparatorParam;
throw std::runtime_error(stmp.c_str());
}
_state.storeFunctor(comparator);
/* the selection strategy */
eoValueParam < eoParamParamType > & selectionParam = _parser.createParam(eoParamParamType("DetTour(2)"), "selection",
"Selection scheme: DetTour(T), StochTour(t) or Random", 'S', "Evolution Engine");
eoParamParamType & ppSelect = selectionParam.value();
moeoSelectOne < MOEOT > * select;
if (ppSelect.first == std::string("DetTour"))
{
unsigned int tSize;
if (!ppSelect.second.size()) // no parameter added
{
std::cerr << "WARNING, no parameter passed to DetTour, using 2" << std::endl;
tSize = 2;
// put back 2 in parameter for consistency (and status file)
ppSelect.second.push_back(std::string("2"));
}
else // parameter passed by user as DetTour(T)
{
tSize = atoi(ppSelect.second[0].c_str());
}
select = new moeoDetTournamentSelect < MOEOT > (*comparator, tSize);
}
else if (ppSelect.first == std::string("StochTour"))
{
double tRate;
if (!ppSelect.second.size()) // no parameter added
{
std::cerr << "WARNING, no parameter passed to StochTour, using 1" << std::endl;
tRate = 1;
// put back 1 in parameter for consistency (and status file)
ppSelect.second.push_back(std::string("1"));
}
else // parameter passed by user as StochTour(T)
{
tRate = atof(ppSelect.second[0].c_str());
}
select = new moeoStochTournamentSelect < MOEOT > (*comparator, tRate);
}
/*
else if (ppSelect.first == string("Roulette"))
{
// TO DO !
// ...
}
*/
else if (ppSelect.first == std::string("Random"))
{
select = new moeoRandomSelect <MOEOT > ();
}
else
{
std::string stmp = std::string("Invalid selection strategy: ") + ppSelect.first;
throw std::runtime_error(stmp.c_str());
}
_state.storeFunctor(select);
/* the replacement strategy */
std::string & replacementParam = _parser.createParam(std::string("Elitist"), "replacement",
"Replacement scheme: Elitist, Environmental or Generational", 'R', "Evolution Engine").value();
moeoReplacement < MOEOT > * replace;
if (replacementParam == std::string("Elitist"))
{
replace = new moeoElitistReplacement < MOEOT> (*fitnessAssignment, *diversityAssignment, *comparator);
}
else if (replacementParam == std::string("Environmental"))
{
replace = new moeoEnvironmentalReplacement < MOEOT> (*fitnessAssignment, *diversityAssignment, *comparator);
}
else if (replacementParam == std::string("Generational"))
{
replace = new moeoGenerationalReplacement < MOEOT> ();
}
else
{
std::string stmp = std::string("Invalid replacement strategy: ") + replacementParam;
throw std::runtime_error(stmp.c_str());
}
_state.storeFunctor(replace);
/* the number of offspring */
eoValueParam < eoHowMany > & offspringRateParam = _parser.createParam(eoHowMany(1.0), "nbOffspring",
"Number of offspring (percentage or absolute)", 'O', "Evolution Engine");
// the general breeder
eoGeneralBreeder < MOEOT > * breed = new eoGeneralBreeder < MOEOT > (*select, _op, offspringRateParam.value());
_state.storeFunctor(breed);
// the eoEasyEA
moeoEA < MOEOT > * algo = new moeoEasyEA < MOEOT > (_continue, _eval, *breed, *replace, *fitnessAssignment, *diversityAssignment);
_state.storeFunctor(algo);
return *algo;
}
#endif /*MAKE_EA_MOEO_H_*/

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#include <make_eval_FlowShop.h>
#include <make_genotype_FlowShop.h>
#include <make_op_FlowShop.h>
#include <do/make_pop.h>
#include <make_continue_moeo.h>
#include <make_ea_moeo.h>
#include <make_para_eval.h>
#include <make_checkpoint_moeo.h>

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#include <peo>
#include <es.h>
#include <moeo>
peoMoeoPopEval<FlowShop> & do_make_para_eval(eoParser& _parser, eoState& _state)
{
std::string benchmarkFileName = _parser.getORcreateParam(std::string(), "BenchmarkFile", "Benchmark file name (benchmarks are available at www.lifl.fr/~liefooga/benchmarks)", 'B',"Representation", true).value();
if (benchmarkFileName == "")
{
std::string stmp = "*** Missing name of the benchmark file\n";
stmp += " Type '-B=the_benchmark_file_name' or '--BenchmarkFile=the_benchmark_file_name'\n";
stmp += " Benchmarks files are available at www.lifl.fr/~liefooga/benchmarks";
throw std::runtime_error(stmp.c_str());
}
FlowShopBenchmarkParser fParser(benchmarkFileName);
unsigned int M = fParser.getM();
unsigned int N = fParser.getN();
std::vector< std::vector<unsigned int> > p = fParser.getP();
std::vector<unsigned int> d = fParser.getD();
FlowShopEval* plainEval = new FlowShopEval(M, N, p, d);
peoMoeoPopEval<FlowShop>* eval = new peoMoeoPopEval<FlowShop> (* plainEval);
_state.storeFunctor(eval);
return *eval;
}