214 lines
5.8 KiB
C++
214 lines
5.8 KiB
C++
// -*- mode: c++; c-indent-level: 4; c++-member-init-indent: 8; comment-column: 35; -*-
|
|
|
|
//-----------------------------------------------------------------------------
|
|
// eoInit.h
|
|
// (c) Maarten Keijzer 2000, GeNeura Team, 2000
|
|
/*
|
|
This library is free software; you can redistribute it and/or
|
|
modify it under the terms of the GNU Lesser General Public
|
|
License as published by the Free Software Foundation; either
|
|
version 2 of the License, or (at your option) any later version.
|
|
|
|
This library is distributed in the hope that it will be useful,
|
|
but WITHOUT ANY WARRANTY; without even the implied warranty of
|
|
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
|
|
Lesser General Public License for more details.
|
|
|
|
You should have received a copy of the GNU Lesser General Public
|
|
License along with this library; if not, write to the Free Software
|
|
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
|
|
|
|
Contact: todos@geneura.ugr.es, http://geneura.ugr.es
|
|
Marc.Schoenauer@polytechnique.fr
|
|
mak@dhi.dk
|
|
*/
|
|
//-----------------------------------------------------------------------------
|
|
|
|
#ifndef _eoInit_H
|
|
#define _eoInit_H
|
|
|
|
#include <algorithm>
|
|
|
|
#include <eoOp.h>
|
|
#include <eoSTLFunctor.h>
|
|
#include <utils/eoRndGenerators.h>
|
|
#include <utils/rnd_generators.h> // for shuffle method
|
|
|
|
|
|
/**
|
|
@defgroup Initializators Initialization operators
|
|
@ingroup Operators
|
|
|
|
Initializators are operators that creates initial individuals and populations.
|
|
*/
|
|
/** @{*/
|
|
/**
|
|
Base (name) class for Initialization of chromosomes, used in a population
|
|
contructor. It is derived from eoMonOp, so it can be used
|
|
inside the algorithm as well.
|
|
|
|
@see eoPop
|
|
*/
|
|
template <class EOT>
|
|
class eoInit : public eoUF<EOT&, void>
|
|
{
|
|
public:
|
|
|
|
/** className: Mandatory because of eoCombinedInit.
|
|
SHould be pure virtual, but then we should go over the whole
|
|
* code to write the method for all derived classes ... MS 16/7/04 */
|
|
virtual std::string className(void) const { return "eoInit"; }
|
|
};
|
|
|
|
/** turning an eoInit into a generator
|
|
* probably we should only use genrators - and suppress eoInit ???
|
|
* MS - July 2001
|
|
*/
|
|
template <class EOT>
|
|
class eoInitGenerator : public eoF<EOT>
|
|
{
|
|
public:
|
|
|
|
/** Ctor from a plain eoInit */
|
|
eoInitGenerator(eoInit<EOT> & _init):init(_init) {}
|
|
|
|
virtual EOT operator()()
|
|
{
|
|
EOT p;
|
|
init(p);
|
|
return (p);
|
|
}
|
|
private:
|
|
eoInit<EOT> & init;
|
|
};
|
|
|
|
/**
|
|
Initializer for fixed length representations with a single type
|
|
*/
|
|
template <class EOT>
|
|
class eoInitFixedLength: public eoInit<EOT>
|
|
{
|
|
public:
|
|
|
|
typedef typename EOT::AtomType AtomType;
|
|
|
|
eoInitFixedLength(unsigned _combien, eoRndGenerator<AtomType>& _generator)
|
|
: combien(_combien), generator(_generator) {}
|
|
|
|
virtual void operator()(EOT& chrom)
|
|
{
|
|
chrom.resize(combien);
|
|
std::generate(chrom.begin(), chrom.end(), generator);
|
|
chrom.invalidate();
|
|
}
|
|
|
|
private :
|
|
unsigned combien;
|
|
/// generic wrapper for eoFunctor (s), to make them have the function-pointer style copy semantics
|
|
eoSTLF<AtomType> generator;
|
|
};
|
|
|
|
/**
|
|
Initializer for variable length representations with a single type
|
|
*/
|
|
template <class EOT>
|
|
class eoInitVariableLength: public eoInit<EOT>
|
|
{
|
|
public:
|
|
typedef typename EOT::AtomType AtomType;
|
|
|
|
// /** Ctor from a generator */
|
|
// eoInitVariableLength(unsigned _minSize, unsigned _maxSize, eoF<typename EOT::AtomType> & _generator = Gen())
|
|
// : offset(_minSize), extent(_maxSize - _minSize),
|
|
// repGenerator( eoInitGenerator<typename EOT::AtomType>(*(new eoInit<EOT>)) ),
|
|
// generator(_generator)
|
|
// {
|
|
// if (_minSize >= _maxSize)
|
|
// throw std::logic_error("eoInitVariableLength: minSize larger or equal to maxSize");
|
|
// }
|
|
|
|
/** Ctor from an eoInit */
|
|
eoInitVariableLength(unsigned _minSize, unsigned _maxSize, eoInit<AtomType> & _init)
|
|
: offset(_minSize), extent(_maxSize - _minSize), init(_init)
|
|
{
|
|
if (_minSize >= _maxSize)
|
|
throw std::logic_error("eoInitVariableLength: minSize larger or equal to maxSize");
|
|
}
|
|
|
|
|
|
virtual void operator()(EOT& _chrom)
|
|
{
|
|
_chrom.resize(offset + rng.random(extent));
|
|
typename std::vector<AtomType>::iterator it;
|
|
for (it=_chrom.begin(); it<_chrom.end(); it++)
|
|
init(*it);
|
|
_chrom.invalidate();
|
|
}
|
|
|
|
// accessor to the atom initializer (needed by operator constructs sometimes)
|
|
eoInit<AtomType> & atomInit() {return init;}
|
|
|
|
private :
|
|
unsigned offset;
|
|
unsigned extent;
|
|
eoInit<AtomType> & init;
|
|
};
|
|
|
|
|
|
/**
|
|
Initializer for permutation (integer-based) representations.
|
|
*/
|
|
template <class EOT>
|
|
class eoInitPermutation: public eoInit<EOT>
|
|
{
|
|
public:
|
|
|
|
typedef typename EOT::AtomType AtomType;
|
|
|
|
eoInitPermutation(unsigned _chromSize, unsigned _startFrom=0)
|
|
: chromSize(_chromSize), startFrom(_startFrom){}
|
|
|
|
virtual void operator()(EOT& chrom)
|
|
{
|
|
chrom.resize(chromSize);
|
|
for(unsigned idx=0;idx <chrom.size();idx++)
|
|
chrom[idx]=idx+startFrom;
|
|
|
|
std::random_shuffle(chrom.begin(), chrom.end(),gen);
|
|
chrom.invalidate();
|
|
}
|
|
|
|
private :
|
|
unsigned chromSize;
|
|
unsigned startFrom;
|
|
UF_random_generator<unsigned int> gen;
|
|
};
|
|
/** @example t-eoInitPermutation.cpp
|
|
*/
|
|
|
|
|
|
/**
|
|
eoInitAdaptor changes the place in the hierarchy
|
|
from eoInit to eoMonOp. This is mainly a type conversion,
|
|
nothing else
|
|
|
|
@see eoInit, eoMonOp
|
|
*/
|
|
template <class EOT>
|
|
class eoInitAdaptor : public eoMonOp<EOT>
|
|
{
|
|
public :
|
|
eoInitAdaptor(eoInit<EOT>& _init) : init(_init) {}
|
|
|
|
bool operator()(EOT& _eot)
|
|
{
|
|
init(_eot);
|
|
return true;
|
|
}
|
|
private :
|
|
|
|
eoInit<EOT>& init;
|
|
};
|
|
|
|
#endif
|
|
/** @}*/
|