// -*- mode: c++; c-indent-level: 4; c++-member-init-indent: 8; comment-column: 35; -*- //----------------------------------------------------------------------------- // eoStat.h // (c) Marc Schoenauer, Maarten Keijzer and GeNeura Team, 2000 /* This library is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details. You should have received a copy of the GNU Lesser General Public License along with this library; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA Contact: todos@geneura.ugr.es, http://geneura.ugr.es Marc.Schoenauer@polytechnique.fr mkeijzer@dhi.dk */ //----------------------------------------------------------------------------- #ifndef _eoStat_h #define _eoStat_h #include #include #include /** Base class for all statistics that need to be calculated over the (unsorted) population */ template class eoStatBase : public eoUnaryFunctor&> {}; template class eoStat : public eoValueParam, public eoStatBase { public : eoStat(T _value, std::string _description) : eoValueParam(_value, _description) {} }; /** Base class for statistics calculated over a sorted snapshot of the population */ template class eoSortedStatBase : public eoUnaryFunctor&> { }; template class eoSortedStat : public eoSortedStatBase, public eoValueParam { public : eoSortedStat(ParamType _value, std::string _desc) : eoValueParam(_value, _desc) {} }; #include /** Average fitness of a population, fitness needs to be scalar. */ template class eoAverageStat : public eoStat { public : eoAverageStat(std::string _description = "Average Fitness") : eoStat(0.0, _description) {} static double sumFitness(double _sum, const EOT& _eot) { _sum += _eot.fitness(); return _sum; } eoAverageStat(double _value, std::string _desc) : eoStat(_value, _desc) {} virtual void operator()(const eoPop& _pop) { double v = std::accumulate(_pop.begin(), _pop.end(), 0.0, eoAverageStat::sumFitness); value() = v / _pop.size(); } }; template class eoSecondMomentStats : public eoStat > { public : typedef std::pair SquarePair; eoSecondMomentStats(std::string _description = "Average & Stdev") : eoStat(std::make_pair(0.0,0.0), _description) {} static SquarePair sumOfSquares(SquarePair _sq, const EOT& _eo) { double fitness = _eo.fitness(); _sq.first += fitness; _sq.second += fitness * fitness; return _sq; } virtual void operator()(const eoPop& _pop) { SquarePair result = std::accumulate(_pop.begin(), _pop.end(), std::make_pair(0.0, 0.0), eoSecondMomentStats::sumOfSquares); double n = _pop.size(); value().first = result.first / n; // average value().second = sqrt( (result.second - n * value().first * value().first) / (n - 1.0)); // stdev } }; template class eoNthElementFitnessStat : public eoSortedStat { public : typedef typename EOT::Fitness Fitness; eoNthElementFitnessStat(int _which, std::string _description = "nth element fitness") : eoSortedStat(Fitness(), _description), which(_which) {} virtual void operator()(const vector& _pop) { if (which > _pop.size()) throw logic_error("fitness requested of element outside of pop"); value() = _pop[which]->fitness(); } private : unsigned which; }; template class eoBestFitnessStat : public eoNthElementFitnessStat { public : typedef typename EOT::Fitness Fitness; eoBestFitnessStat(std::string _description = "Best Fitness") : eoNthElementFitnessStat(0, _description) {} }; template class eoDistanceStat : public eoStat { public : eoDistanceStat(std::string _name = "distance") : eoStat(0.0, _name) {} template double distance(T a, T b) { T res = a-b; return res < 0? -res : res; } double distance(bool a, bool b) { return (a==b)? 0 : 1; } void operator()(const eoPop& _pop) { double& v = value(); v = 0.0; for (unsigned i = 0; i < _pop.size(); ++i) { for (unsigned j = 0; j < _pop.size(); ++j) { for (unsigned k = 0; k < _pop[i].size(); ++k) { v += distance(_pop[i][k], _pop[j][k]); } } } double sz = _pop.size(); v /= sz * sz * _pop[0].size(); } }; /* template class eoStdevStat : public eoStat { public : typedef typename eoSecondMomentStats::SquarePair SquarePair; eoStdevStat(std::string _description = "Stdev") : eoStat(0.0, _description) {} virtual void operator()(const eoPop& _pop) { SquarePair result = std::accumulate(pop.begin(), pop.end(), std::make_pair(0.0, 0.0), eoSecondMomentStats::sumOfSquares); double n = pop.size(); value() = sqrt( (result.second - (result.first / n)) / (n - 1.0)); // stdev } }; */ #endif