// -*- mode: c++; c-indent-level: 4; c++-member-init-indent: 8; comment-column: 35; -*- //----------------------------------------------------------------------------- // make_op.h - the real-valued version // (c) Maarten Keijzer, Marc Schoenauer and GeNeura Team, 2001 /* This library is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. This library is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License for more details. You should have received a copy of the GNU Lesser General Public License along with this library; if not, write to the Free Software Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA Contact: todos@geneura.ugr.es, http://geneura.ugr.es Marc.Schoenauer@polytechnique.fr mkeijzer@dhi.dk */ //----------------------------------------------------------------------------- #ifndef _make_op_h #define _make_op_h // the operators #include #include #include #include // combinations of simple eoOps (eoMonOp and eoQuadOp) #include // the specialized Real stuff #include #include #include #include // also need the parser and param includes #include #include /* * This function builds the operators that will be applied to the eoReal * * It uses a parser (to get user parameters) and a state (to store the memory) * the last argument is an individual, needed for 2 reasons * it disambiguates the call after instanciations * some operator might need some private information about the indis * * This is why the template is the complete EOT even though only the fitness * is actually templatized here: the following only applies to bitstrings * * Note : the last parameter is an eoInit: if some operator needs some info * about the gneotypes, the init has it all (e.g. bounds, ...) * Simply do * EOT myEO; * _init(myEO); * and myEO is then an ACTUAL object */ template eoGenOp & do_make_op(eoParameterLoader& _parser, eoState& _state, eoRealInitBounded& _init) { // First, decide whether the objective variables are bounded eoValueParam& boundsParam = _parser.createParam(eoParamParamType("(0,1)"), "objectBounds", "Bounds for variables (unbounded if absent)", 'B', "Variation Operators"); // get vector size unsigned vecSize = _init.size(); // the bounds pointer eoRealVectorBounds * ptBounds; if (_parser.isItThere(boundsParam)) // otherwise, no bounds { /////Warning: this code should probably be replaced by creating ///// some eoValueParam with specific implementation //// in eoParser.cpp. At the moemnt, it is there (cf also make_genotype eoParamParamType & ppBounds = boundsParam.value(); // pair > // transform into a vector vector v; vector::iterator it; for (it=ppBounds.second.begin(); itc_str()); double r; is >> r; v.push_back(r); } // now create the eoRealVectorBounds object if (v.size() == 2) // a min and a max for all variables ptBounds = new eoRealVectorBounds(vecSize, v[0], v[1]); else // no time now throw runtime_error("Sorry, only unique bounds for all variables implemented at the moment. Come back later"); // we need to give ownership of this pointer to somebody /////////// end of temporary code } else // no param for bounds was given ptBounds = new eoRealVectorNoBounds(vecSize); // DON'T USE eoDummyVectorNoBounds // as it does not have any dimension // this is a temporary version(!), // while Maarten codes the full tree-structured general operator input // BTW we must leave that simple version available somehow, as it is the one // that 90% people use! eoValueParam& operatorParam = _parser.createParam(string("SGA"), "operator", "Description of the operator (SGA only now)", 'o', "Variation Operators"); if (operatorParam.value() != string("SGA")) throw runtime_error("Sorry, only SGA-like operator available right now\n"); // now we read Pcross and Pmut, // the relative weights for all crossovers -> proportional choice // the relative weights for all mutations -> proportional choice // and create the eoGenOp that is exactly // crossover with pcross + mutation with pmut eoValueParam& pCrossParam = _parser.createParam(0.6, "pCross", "Probability of Crossover", 'C', "Variation Operators" ); // minimum check if ( (pCrossParam.value() < 0) || (pCrossParam.value() > 1) ) throw runtime_error("Invalid pCross"); eoValueParam& pMutParam = _parser.createParam(0.1, "pMut", "Probability of Mutation", 'M', "Variation Operators" ); // minimum check if ( (pMutParam.value() < 0) || (pMutParam.value() > 1) ) throw runtime_error("Invalid pMut"); // the crossovers ///////////////// // the parameters eoValueParam& segmentRateParam = _parser.createParam(double(1.0), "segmentRate", "Relative rate for segment crossover", 's', "Variation Operators" ); // minimum check if ( (segmentRateParam.value() < 0) ) throw runtime_error("Invalid segmentRate"); eoValueParam& arithmeticRateParam = _parser.createParam(double(2.0), "arithmeticRate", "Relative rate for arithmetic crossover", 'A', "Variation Operators" ); // minimum check if ( (arithmeticRateParam.value() < 0) ) throw runtime_error("Invalid arithmeticRate"); // minimum check bool bCross = true; if (segmentRateParam.value()+arithmeticRateParam.value()==0) { cerr << "Warning: no crossover" << endl; bCross = false; } // Create the CombinedQuadOp eoPropCombinedQuadOp *ptCombinedQuadOp = NULL; eoQuadOp *ptQuad = NULL; if (bCross) { // segment crossover for bitstring - pass it the bounds ptQuad = new eoSegmentCrossover(*ptBounds); _state.storeFunctor(ptQuad); ptCombinedQuadOp = new eoPropCombinedQuadOp(*ptQuad, segmentRateParam.value()); // arithmetic crossover ptQuad = new eoArithmeticCrossover(*ptBounds); _state.storeFunctor(ptQuad); ptCombinedQuadOp->add(*ptQuad, arithmeticRateParam.value()); // don't forget to store the CombinedQuadOp _state.storeFunctor(ptCombinedQuadOp); } // the mutations ///////////////// // the parameters eoValueParam & epsilonParam = _parser.createParam(0.01, "epsilon", "Half-size of interval for Uniform Mutation", 'e', "Variation Operators" ); // minimum check if ( (epsilonParam.value() < 0) ) throw runtime_error("Invalid epsilon"); eoValueParam & uniformMutRateParam = _parser.createParam(1.0, "uniformMutRate", "Relative rate for uniform mutation", 'u', "Variation Operators" ); // minimum check if ( (uniformMutRateParam.value() < 0) ) throw runtime_error("Invalid uniformMutRate"); eoValueParam & detMutRateParam = _parser.createParam(1.0, "detMutRate", "Relative rate for deterministic uniform mutation", 'd', "Variation Operators" ); // minimum check if ( (detMutRateParam.value() < 0) ) throw runtime_error("Invalid detMutRate"); eoValueParam & normalMutRateParam = _parser.createParam(1.0, "normalMutRate", "Relative rate for Gaussian mutation", 'd', "Variation Operators" ); // minimum check if ( (normalMutRateParam.value() < 0) ) throw runtime_error("Invalid normalMutRate"); eoValueParam & sigmaParam = _parser.createParam(0.3, "sigma", "Sigma (fixed) for Gaussian mutation", 's', "Variation Operators" ); // minimum check bool bMut = true; if (uniformMutRateParam.value()+detMutRateParam.value()+normalMutRateParam.value()==0) { cerr << "Warning: no mutation" << endl; bMut = false; } if (!bCross && !bMut) throw runtime_error("No operator called in SGA operator definition!!!"); // Create the CombinedMonOp eoPropCombinedMonOp *ptCombinedMonOp = NULL; eoMonOp *ptMon = NULL; if (bMut) { // uniform mutation on all components: // offspring(i) uniformly chosen in [parent(i)-epsilon, parent(i)+epsilon] ptMon = new eoUniformMutation(*ptBounds, epsilonParam.value()); _state.storeFunctor(ptMon); // create the CombinedMonOp ptCombinedMonOp = new eoPropCombinedMonOp(*ptMon, uniformMutRateParam.value()); // mutate exactly 1 component (uniformly) per individual ptMon = new eoDetUniformMutation(*ptBounds, epsilonParam.value()); _state.storeFunctor(ptMon); ptCombinedMonOp->add(*ptMon, detMutRateParam.value()); // mutate all component using Gaussian mutation ptMon = new eoNormalMutation(*ptBounds, sigmaParam.value()); _state.storeFunctor(ptMon); ptCombinedMonOp->add(*ptMon, normalMutRateParam.value()); _state.storeFunctor(ptCombinedMonOp); } // now build the eoGenOp: // to simulate SGA (crossover with proba pCross + mutation with proba pMut // we must construct // a sequential combination of // with proba 1, a proportional combination of // a QuadCopy and our crossover // with proba pMut, our mutation // the crossover - with probability pCross eoProportionalOp * cross = new eoProportionalOp ; _state.storeFunctor(cross); ptQuad = new eoQuadCloneOp; _state.storeFunctor(ptQuad); cross->add(*ptCombinedQuadOp, pCrossParam.value()); // user crossover cross->add(*ptQuad, 1-pCrossParam.value()); // clone operator // now the sequential eoSequentialOp *op = new eoSequentialOp; _state.storeFunctor(op); op->add(*cross, 1.0); // always crossover (but clone with prob 1-pCross op->add(*ptCombinedMonOp, pMutParam.value()); // that's it! return *op; } #endif