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327 commits

Author SHA1 Message Date
Benjamin Bouvier
1885517dc1 MPI Multistart: new default ResetAlgo functor: reuse the same pop. 2012-07-26 14:31:57 +02:00
Benjamin Bouvier
12614faee1 MPI Multistart: saving solutions sent by workers in a eoPop instead of keeping only the best solution. 2012-07-26 14:23:07 +02:00
Benjamin Bouvier
9a40d6ed04 MPI Multistart: removed traces and useless comments. 2012-07-26 14:12:32 +02:00
Benjamin Bouvier
db93ac635b MPI Multistart: merged functors ReinitJob and ResetAlgo, as it should in fact be done in the mean while. 2012-07-26 13:58:36 +02:00
Benjamin Bouvier
e2e6ad8c99 MPI Multistart: renamed default functors and added a few default functors. 2012-07-26 13:48:40 +02:00
Benjamin Bouvier
e58b3e5cb2 MPI Multistart: removed second template parameter Fitness, as it can be deduced from Individual. 2012-07-26 12:06:23 +02:00
Benjamin Bouvier
0c1fc2ce99 MPI MultiStart: using SGA as example and functors for seed generation, reinitialization of pop, algorithm reset. 2012-07-26 11:58:42 +02:00
Benjamin Bouvier
74bdb0fa91 Multistart: added possibility to reinit population on each MultiStartJob, or use the same pop. 2012-07-25 15:24:25 +02:00
Benjamin Bouvier
355541ae88 MPI example: Multistart. 2012-07-25 14:56:02 +02:00
Benjamin Bouvier
73af5d4f7b Fixed compilation bug (use of stdlib constantes) in MPI tests, when cmaking locally. 2012-07-25 14:55:45 +02:00
Benjamin Bouvier
e48782f22d Added a template for eo::mpi::Job in test/mpi directory. 2012-07-24 18:22:35 +02:00
Benjamin Bouvier
09af612749 Updated examples' comments. 2012-07-24 17:12:18 +02:00
Benjamin Bouvier
3613618544 Updated compilation system so as to remove dependance to Boost. 2012-07-24 16:36:10 +02:00
Benjamin Bouvier
0e56778327 Updated the tests to conform the new Boost-like API 2012-07-24 15:41:25 +02:00
Benjamin Bouvier
1f5719c647 Put back example t-mpi-eval to use a customized store. 2012-07-23 15:03:47 +02:00
Benjamin Bouvier
eebeaa810e Updating names: SharedDataFunction::d => SharedDataFunction::_data, ParallelApplyData::_data => ParallelApplyData::_table 2012-07-18 17:37:50 +02:00
Benjamin Bouvier
8285d78245 Added comments in wrapper of t-mpi-eval. 2012-07-18 13:57:13 +02:00
Benjamin Bouvier
b92f17fce5 Documentation of MPI examples. 2012-07-16 15:07:48 +02:00
Benjamin Bouvier
d2816d530a Included MPI tests into compilation, if WITH_MPI is defined. 2012-07-13 16:47:28 +02:00
Benjamin Bouvier
12560899ae Updating MPI tests. 2012-07-11 12:00:36 +02:00
Benjamin Bouvier
581b24af18 Bugfix: a reference can't be reinitialized. Different vectors weren't recopied after evaluation. 2012-07-04 13:24:10 +02:00
Benjamin Bouvier
603268b053 Added store management to eoPopEvalFunc. 2012-07-04 10:53:57 +02:00
Benjamin Bouvier
24c29db6f3 Using again parallel apply into eoPopEvalFunc::eoParallelPopEvalFunc. 2012-07-03 15:53:19 +02:00
Benjamin Bouvier
1d3790a0e4 Updating multiple roles test. 2012-07-03 15:07:27 +02:00
Benjamin Bouvier
564cc3bccd Using eo::mpi::DEFAULT_MASTER instead of raw constants. 2012-07-03 14:51:34 +02:00
Benjamin Bouvier
63f12c4e1c JobStore has now getters, setters and wrappers methods. 2012-07-03 14:48:47 +02:00
Benjamin Bouvier
6bb2ccfbd6 Steps of MpiJob are now functors which can be wrapped (using decorator pattern). 2012-07-03 13:57:20 +02:00
Benjamin Bouvier
ff61676fb7 Cleaner version of functional parallel job. 2012-07-02 17:53:02 +02:00
Benjamin Bouvier
d05cbfd60d First version of functional job 2012-07-02 11:56:41 +02:00
Benjamin Bouvier
fc68c3b81e eoPopEvalFunc updated for parallel evaluation. 2012-06-25 14:55:15 +02:00
Benjamin Bouvier
b291e56e03 Putting everything in namespace eo::mpi 2012-06-25 14:11:44 +02:00
Benjamin Bouvier
b9a2246f82 Generating time based seed for random generator 2012-06-25 13:53:34 +02:00
Benjamin Bouvier
d9c7ef0300 Parallel apply test is done on a big table. 2012-06-25 13:51:49 +02:00
Benjamin Bouvier
f4d8b43f7d ParallelApply can now handle many data at a time. 2012-06-25 13:41:48 +02:00
Benjamin Bouvier
66c7b1f12d Using real dynamic assignments for tests. 2012-06-25 11:44:14 +02:00
Benjamin Bouvier
5bf03dec2b Multiple roles demo has now 2 sub masters. Needs to be launched with at least 7 nodes. 2012-06-22 17:56:08 +02:00
Benjamin Bouvier
ac13550faa REST_OF_THE_WORLD constant in assignmentAlgorithm. 2012-06-22 17:40:00 +02:00
Benjamin Bouvier
f3cb5eec20 More constructors for assignment algorithms: by interval, by unique worker, by vector of ranks, or whole world. 2012-06-22 17:31:46 +02:00
Benjamin Bouvier
aec5236eb1 Updated tests: multipleRoles compiles again and parallelApply tries all kinds of assignments algorithms. 2012-06-22 16:14:27 +02:00
Benjamin Bouvier
da9eb9ce7b Merged MpiJob and Role, using eoLogger instead of cout. 2012-06-22 14:24:23 +02:00
Benjamin Bouvier
28ab2004ea MpiJob now just deal with loop logic, not with handled data. Handled data is now handled by the MpiJob subclasses. Tests updated. 2012-06-21 18:26:56 +02:00
Benjamin Bouvier
3c8e902155 Removing useless comments in parallelApply. 2012-06-21 17:23:25 +02:00
Benjamin Bouvier
92bd4eec1b Adding tests for multiple roles and updating parallel apply. 2012-06-21 17:22:28 +02:00
Benjamin Bouvier
9275fbedad Making mpi tests dir 2012-06-21 17:20:24 +02:00
Benjamin Bouvier
122d0debf0 eoMpi API is simpler and allows to have multiple roles for a given node. 2012-06-21 16:10:51 +02:00
Benjamin Bouvier
fd2facb14e Moved mpi related files into mpi/ and compiling it as an extern library. 2012-06-21 15:03:41 +02:00
Benjamin Bouvier
bd959cb3ef First parallel evaluation with MPI. Look at t-eoMpiParallel.cpp 2012-06-18 15:22:47 +02:00
Benjamin Bouvier
04f972475c First version of generic MPI parallelization 2012-06-18 14:20:06 +02:00
Caner Candan
25f675bac2 * eoLogger: last issues fixed 2011-05-11 15:29:29 +02:00
Caner Candan
bdc0b0fa9e - removed useless .cvsignore files since we are using git now 2011-05-10 10:34:35 +02:00