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Merge branch 'master' of ssh://eodev.git.sourceforge.net/gitroot/eodev/eodev

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This commit is contained in:
Caner Candan 2011-05-07 22:47:01 +02:00
commit f8202d238a
496 changed files with 8734 additions and 8186 deletions
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5
edo/AUTHORS
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@ -1,6 +1,5 @@
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
own estimation of distribution algorithms.
This library is free software; you can redistribute it and/or

35
edo/CMakeLists.txt
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@ -1,5 +1,14 @@
############################################################################
##########
### 1) If you want to set your own variables in install.cmake and avoid the cmd line
######################################################################################
### 1) Set the application properties
INCLUDE(install.cmake OPTIONAL)
######################################################################################
######################################################################################
### 2) Project properties
######################################################################################
# Checks cmake version compatibility
@ -16,15 +25,12 @@ SET(PROJECT_VERSION "${PROJECT_VERSION_MAJOR}.${PROJECT_VERSION_MINOR}.${PROJECT
######################################################################################
### 2) Include useful features
### 3) Include useful features
######################################################################################
INCLUDE(FindDoxygen)
INCLUDE(FindPkgConfig)
PKG_CHECK_MODULES(EO eo REQUIRED)
PKG_CHECK_MODULES(MO mo REQUIRED)
FIND_PACKAGE(Boost 1.33.0)
INCLUDE_DIRECTORIES(
@ -34,11 +40,16 @@ INCLUDE_DIRECTORIES(
# /Dev/ometah-0.3/common
)
LINK_DIRECTORIES(
${EO_LIBRARY_DIRS}
${MO_LIBRARY_DIRS}
)
######################################################################################
######################################################################################
### 3) Include header files path
### 4) Include header files path
######################################################################################
INCLUDE_DIRECTORIES(
@ -49,7 +60,7 @@ INCLUDE_DIRECTORIES(
######################################################################################
### 4) Set compiler definitions
### 5) Set compiler definitions
######################################################################################
IF(UNIX)
@ -63,7 +74,7 @@ ENDIF()
######################################################################################
### 5) Prepare some variables for CMAKE usage
### 6) Prepare some variables for CMAKE usage
######################################################################################
SET(SAMPLE_SRCS)
@ -72,7 +83,7 @@ SET(SAMPLE_SRCS)
######################################################################################
### 6) Now where we go ?
### 7) Now where we go ?
######################################################################################
ADD_SUBDIRECTORY(src)
@ -85,7 +96,7 @@ ADD_SUBDIRECTORY(doc)
######################################################################################
### 7) Create executable, link libraries and prepare target
### 8) Create executable, link libraries and prepare target
######################################################################################
SET(LIBRARY_OUTPUT_PATH ${CMAKE_BINARY_DIR}/lib)
@ -99,7 +110,7 @@ INSTALL(TARGETS edo ARCHIVE DESTINATION lib COMPONENT libraries)
######################################################################################
### 8) Install pkg-config config file for EO
### 9) Install pkg-config config file for EO
######################################################################################
INSTALL(FILES edo.pc DESTINATION lib/pkgconfig COMPONENT headers)
@ -108,7 +119,7 @@ INSTALL(FILES edo.pc DESTINATION lib/pkgconfig COMPONENT headers)
######################################################################################
### 9) Include packaging
### 10) Include packaging
######################################################################################
INCLUDE(Packaging.cmake)

14
edo/COPYING
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@ -1,5 +1,5 @@
GNU LESSER GENERAL PUBLIC LICENSE
Version 2.1, February 1999
GNU LESSER GENERAL PUBLIC LICENSE
Version 2.1, February 1999
Copyright (C) 1991, 1999 Free Software Foundation, Inc.
51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
@ -10,7 +10,7 @@
as the successor of the GNU Library Public License, version 2, hence
the version number 2.1.]
Preamble
Preamble
The licenses for most software are designed to take away your
freedom to share and change it. By contrast, the GNU General Public
@ -112,7 +112,7 @@ modification follow. Pay close attention to the difference between a
former contains code derived from the library, whereas the latter must
be combined with the library in order to run.
GNU LESSER GENERAL PUBLIC LICENSE
GNU LESSER GENERAL PUBLIC LICENSE
TERMS AND CONDITIONS FOR COPYING, DISTRIBUTION AND MODIFICATION
0. This License Agreement applies to any software library or other
@ -432,7 +432,7 @@ decision will be guided by the two goals of preserving the free status
of all derivatives of our free software and of promoting the sharing
and reuse of software generally.
NO WARRANTY
NO WARRANTY
15. BECAUSE THE LIBRARY IS LICENSED FREE OF CHARGE, THERE IS NO
WARRANTY FOR THE LIBRARY, TO THE EXTENT PERMITTED BY APPLICABLE LAW.
@ -455,9 +455,9 @@ FAILURE OF THE LIBRARY TO OPERATE WITH ANY OTHER SOFTWARE), EVEN IF
SUCH HOLDER OR OTHER PARTY HAS BEEN ADVISED OF THE POSSIBILITY OF SUCH
DAMAGES.
END OF TERMS AND CONDITIONS
END OF TERMS AND CONDITIONS
How to Apply These Terms to Your New Libraries
How to Apply These Terms to Your New Libraries
If you develop a new library, and you want it to be of the greatest
possible use to the public, we recommend making it free software that

2
edo/application/common/CMakeLists.txt
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@ -10,6 +10,6 @@ FOREACH(file ${RESOURCES})
EXECUTE_PROCESS(
COMMAND ${CMAKE_COMMAND} -E copy_if_different
${CMAKE_CURRENT_SOURCE_DIR}/${file}
${DO_BINARY_DIR}/${file}
${EDO_BINARY_DIR}/${file}
)
ENDFOREACH(file)

4
edo/application/eda/main.cpp
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@ -1,6 +1,6 @@
/*
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
own estimation of distribution algorithms.
This library is free software; you can redistribute it and/or

20
edo/install.cmake-dist Normal file
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@ -0,0 +1,20 @@
# Variables to set
# directory we need to build project
SET(EO_DIR "<<PATH_TO_EO>>" CACHE PATH "EO directory" FORCE)
SET(MO_DIR "<<PATH_TO_MO>>" CACHE PATH "MO directory" FORCE)
# automagically set parameters, do not edit
SET(EO_INCLUDE_DIRS "${EO_DIR}/src" CACHE PATH "EO include directory" FORCE)
SET(EO_LIBRARY_DIRS "${EO_DIR}/release/lib" CACHE PATH "EO library directory" FORCE)
SET(EO_LIBRARIES "eoutils eo es ga cma gcov")
SET(MO_INCLUDE_DIRS "${MO_DIR}/src" CACHE PATH "MO include directory" FORCE)
SET(MO_LIBRARY_DIRS "${MO_DIR}/release/lib" CACHE PATH "MO library directory" FORCE)
SET(MO_LIBRARIES "mo")
# ... or rather use pkg-config (dont forget to comment the code above)
#PKG_CHECK_MODULES(EO eo REQUIRED)
#PKG_CHECK_MODULES(MO mo REQUIRED)

4
edo/src/edo
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@ -1,6 +1,6 @@
/*
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
own estimation of distribution algorithms.
This library is free software; you can redistribute it and/or

5
edo/src/edo.cpp
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@ -1,6 +1,6 @@
/*
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
own estimation of distribution algorithms.
This library is free software; you can redistribute it and/or
@ -25,4 +25,3 @@ Authors:
*/
#include "edo"

4
edo/src/edoAlgo.h
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@ -1,6 +1,6 @@
/*
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
own estimation of distribution algorithms.
This library is free software; you can redistribute it and/or

4
edo/src/edoBounder.h
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@ -1,6 +1,6 @@
/*
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
own estimation of distribution algorithms.
This library is free software; you can redistribute it and/or

4
edo/src/edoBounderBound.h
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@ -1,6 +1,6 @@
/*
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
own estimation of distribution algorithms.
This library is free software; you can redistribute it and/or

4
edo/src/edoBounderNo.h
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@ -1,6 +1,6 @@
/*
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
own estimation of distribution algorithms.
This library is free software; you can redistribute it and/or

5
edo/src/edoBounderRng.h
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@ -1,6 +1,6 @@
/*
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
own estimation of distribution algorithms.
This library is free software; you can redistribute it and/or
@ -60,4 +60,3 @@ private:
};
#endif // !_edoBounderRng_h

20
edo/src/edoBounderUniform.h
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@ -1,6 +1,6 @@
/*
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
own estimation of distribution algorithms.
This library is free software; you can redistribute it and/or
@ -39,16 +39,16 @@ public:
void operator()( EOT& sol )
{
unsigned int size = sol.size();
assert(size > 0);
unsigned int size = sol.size();
assert(size > 0);
for (unsigned int d = 0; d < size; ++d) {
for (unsigned int d = 0; d < size; ++d) {
if ( sol[d] < this->min()[d] || sol[d] > this->max()[d]) {
// use EO's global "rng"
sol[d] = rng.uniform( this->min()[d], this->max()[d] );
}
} // for d in size
if ( sol[d] < this->min()[d] || sol[d] > this->max()[d]) {
// use EO's global "rng"
sol[d] = rng.uniform( this->min()[d], this->max()[d] );
}
} // for d in size
}
};

4
edo/src/edoContinue.h
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@ -1,6 +1,6 @@
/*
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
own estimation of distribution algorithms.
This library is free software; you can redistribute it and/or

4
edo/src/edoDistrib.h
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@ -1,6 +1,6 @@
/*
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
own estimation of distribution algorithms.
This library is free software; you can redistribute it and/or

6
edo/src/edoEDA.h
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@ -1,6 +1,6 @@
/*
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
own estimation of distribution algorithms.
This library is free software; you can redistribute it and/or
@ -108,7 +108,7 @@ public:
*/
void operator ()(eoPop< EOT > & pop)
{
assert(pop.size() > 0);
assert(pop.size() > 0);
//double temperature = _initial_temperature;

6
edo/src/edoEDASA.h
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@ -1,6 +1,6 @@
/*
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
own estimation of distribution algorithms.
This library is free software; you can redistribute it and/or
@ -108,7 +108,7 @@ public:
*/
void operator ()(eoPop< EOT > & pop)
{
assert(pop.size() > 0);
assert(pop.size() > 0);
double temperature = _initial_temperature;

4
edo/src/edoEstimator.h
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@ -1,6 +1,6 @@
/*
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
own estimation of distribution algorithms.
This library is free software; you can redistribute it and/or

4
edo/src/edoEstimatorNormalMono.h
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@ -1,6 +1,6 @@
/*
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
The Evolving Distribution Objects framework (EDO) is a template-based,
ANSI-C++ evolutionary computation library which helps you to write your
own estimation of distribution algorithms.
This library is free software; you can redistribute it and/or

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