added permut components

eo/src/eoShiftMutation.h

@@ -0,0 +1,88 @@
+// -*- mode: c++; c-indent-level: 4; c++-member-init-indent: 8; comment-column: 35; -*-
+
+//-----------------------------------------------------------------------------
+// eoShiftMutation.h
+// (c) GeNeura Team, 2000 - EEAAX 2000 - Maarten Keijzer 2000
+// (c) INRIA Futurs - Dolphin Team - Thomas Legrand 2007
+/*		
+    This library is free software; you can redistribute it and/or
+    modify it under the terms of the GNU Lesser General Public
+    License as published by the Free Software Foundation; either
+    version 2 of the License, or (at your option) any later version.
+
+    This library is distributed in the hope that it will be useful,
+    but WITHOUT ANY WARRANTY; without even the implied warranty of
+    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
+    Lesser General Public License for more details.
+
+    You should have received a copy of the GNU Lesser General Public
+    License along with this library; if not, write to the Free Software
+    Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
+
+    Contact: todos@geneura.ugr.es, http://geneura.ugr.es
+    		 thomas.legrand@lifl.fr
+             Marc.Schoenauer@polytechnique.fr
+             mak@dhi.dk
+ */
+//-----------------------------------------------------------------------------
+
+#ifndef eoShiftMutation_h
+#define eoShiftMutation_h
+
+//-----------------------------------------------------------------------------
+
+
+/**
+ * Shift two components of a chromosome.
+ */
+template<class EOT> class eoShiftMutation: public eoMonOp<EOT>
+{
+ public:
+ 
+  typedef typename EOT::AtomType GeneType;
+ 
+  /// CTor
+  eoShiftMutation(){}
+  
+  
+  /// The class name.
+  virtual std::string className() const { return "eoShiftMutation"; }
+
+
+  /**
+   * Shift two components of the given eoosome.
+   * @param eo The cromosome which is going to be changed.
+   */
+  bool operator()(EOT& _eo)
+    {
+    	
+      unsigned i, j, from, to; 
+      GeneType tmp;
+      
+      // generate two different indices
+      i=eo::rng.random(_eo.size());
+      do j = eo::rng.random(_eo.size()); while (i == j);	
+      
+      // indexes
+      from=std::min(i,j);
+      to=std::max(i,j);
+
+      // keep the first component to change
+      tmp=_eo[to];      
+      
+      // shift
+      for(unsigned int k=to ; k > from ; k--)
+	  	_eo[k]=_eo[k-1];	  	
+	  	
+      // shift the first component
+      _eo[from]=tmp;
+
+      return true;
+    }
+    
+};
+
+
+//-----------------------------------------------------------------------------
+#endif
+