Changed the wrong #ifdef in make_algo_scalar (+ minor comments elsewhere)
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4 changed files with 311 additions and 47 deletions
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@ -78,9 +78,6 @@ eoCheckPoint<EOT>& do_make_checkpoint(eoParameterLoader& _parser, eoState& _stat
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* eoSecondMomentStat: average + stdev - type pair<double, double>
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* eoSortedPopStat : whole population - type string (!!)
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* eoScalarFitnessStat: the fitnesses - type vector<double>
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* eoDFCSTat : FDC wrt best in pop or absolute best - type double
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* requires an eoDistance. See eoFDCStat.h
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* also computes all elements for the FDC scatter plot
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*/
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// Best fitness in population
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@ -131,7 +128,7 @@ eoCheckPoint<EOT>& do_make_checkpoint(eoParameterLoader& _parser, eoState& _stat
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eoValueParam<bool>& printPopParam = _parser.createParam(false, "printPop", "Print sorted pop. every gen.", '\0', "Output");
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if ( printPopParam.value() ) // we do want pop dump
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{
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popStat = new eoSortedPopStat<EOT>("Dump of whole population");
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popStat = new eoSortedPopStat<EOT>;
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// store it
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_state.storeFunctor(popStat);
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// add it to the checkpoint
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@ -139,24 +136,6 @@ eoCheckPoint<EOT>& do_make_checkpoint(eoParameterLoader& _parser, eoState& _stat
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}
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// the Fitness Distance Correlation
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//---------------------------------
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eoValueParam<bool>& printFDCParam = _parser.createParam(true, "printFDC", "Print FDC coeff. every gen.", '\0', "Output");
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eoValueParam<bool>& plotFDCParam = _parser.createParam(false, "plotFDCStat", "Plot FDC scatter plot", '\0', "Output - Graphical");
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eoFDCStat<EOT> *fdcStat = NULL;
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if ( printFDCParam.value() || plotFDCParam.value() ) // we need FDCStat
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{
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// need first an object to compute the distances - here Hamming dist.
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eoQuadDistance<EOT> *dist = new eoQuadDistance<EOT>;
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_state.storeFunctor(dist);
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fdcStat = new eoFDCStat<EOT>(*dist);
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// storeFunctor it
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_state.storeFunctor(fdcStat);
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// add it to the checkpoint
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checkpoint->add(*fdcStat);
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}
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// do we wnat some histogram of fitnesses snpashots?
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eoValueParam<bool> plotHistogramParam = _parser.createParam(false, "plotHisto", "Plot histogram of fitnesses", '\0', "Output - Graphical");
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@ -164,7 +143,7 @@ eoCheckPoint<EOT>& do_make_checkpoint(eoParameterLoader& _parser, eoState& _stat
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// The monitors
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///////////////
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// do we want an eoStdoutMonitor?
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bool needStdoutMonitor = printBestParam.value() || printFDCParam.value()
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bool needStdoutMonitor = printBestParam.value()
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|| printPopParam.value() ;
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// The Stdout monitor will print parameters to the screen ...
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@ -185,15 +164,13 @@ eoCheckPoint<EOT>& do_make_checkpoint(eoParameterLoader& _parser, eoState& _stat
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monitor->add(*bestStat);
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monitor->add(*secondStat);
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}
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if (printFDCParam.value())
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monitor->add(*fdcStat);
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if ( printPopParam.value())
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monitor->add(*popStat);
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}
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// first handle the dir test - if we need at least one file
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if ( ( fileBestParam.value() || plotBestParam.value() ||
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plotFDCParam.value() || plotHistogramParam.value() )
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plotHistogramParam.value() )
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&& !dirOK ) // just in case we add something before
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dirOK = testDirRes(dirNameParam.value(), eraseParam.value()); // TRUE
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@ -227,20 +204,6 @@ eoCheckPoint<EOT>& do_make_checkpoint(eoParameterLoader& _parser, eoState& _stat
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gnuMonitor->add(*averageStat);
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}
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if (plotFDCParam.value()) // a specific plot monitor for FDC
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{
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// first into a file (it adds everything ti itself
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eoFDCFileSnapshot<EOT> *fdcFileSnapshot = new eoFDCFileSnapshot<EOT>(*fdcStat, dirNameParam.value());
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_state.storeFunctor(fdcFileSnapshot);
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// then to a Gnuplot monitor
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eoGnuplot1DSnapshot *fdcGnuplot = new eoGnuplot1DSnapshot(*fdcFileSnapshot);
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_state.storeFunctor(fdcGnuplot);
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// and of course add them to the checkPoint
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checkpoint->add(*fdcFileSnapshot);
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checkpoint->add(*fdcGnuplot);
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}
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// historgram?
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if (plotHistogramParam.value()) // want to see how the fitness is spread?
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{
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