+ boxplot.py: script to generate graphic with boxplot to illustrate distances between theorical and visual means for each population value

This commit is contained in:
Caner Candan 2010-09-21 15:12:19 +02:00
commit ba6770df43
3 changed files with 123 additions and 78 deletions

View file

@ -34,6 +34,7 @@ INCLUDE_DIRECTORIES(${CMAKE_SOURCE_DIR}/application/eda_sa)
SET(SOURCES SET(SOURCES
t-doEstimatorNormalMulti t-doEstimatorNormalMulti
t-mean-distance
) )
FOREACH(current ${SOURCES}) FOREACH(current ${SOURCES})

19
test/boxplot.py Executable file
View file

@ -0,0 +1,19 @@
#!/usr/bin/env python
from pylab import *
FILE_LOCATIONS = 'means_distances_results/files_description.txt'
data = []
locations = [ line.split()[0] for line in open( FILE_LOCATIONS ) ]
for cur_file in locations:
data.append( [ float(line.split()[7]) for line in open( cur_file ).readlines() ] )
print locations
#print data
boxplot( data )
show()

View file

@ -1,3 +1,6 @@
#include <sys/stat.h>
#include <sys/types.h>
#include <sstream> #include <sstream>
#include <iomanip> #include <iomanip>
#include <fstream> #include <fstream>
@ -27,9 +30,10 @@ int main(int ac, char** av)
std::string section("Algorithm parameters"); std::string section("Algorithm parameters");
unsigned int r_max = parser.createParam((unsigned int)100, "run-number", "Number of run", 'r', section).value(); // r
unsigned int p_min = parser.createParam((unsigned int)10, "population-min", "Population min", 'p', section).value(); // p unsigned int p_min = parser.createParam((unsigned int)10, "population-min", "Population min", 'p', section).value(); // p
unsigned int p_max = parser.createParam((unsigned int)10000, "population-max", "Population max", 'P', section).value(); // P unsigned int p_max = parser.createParam((unsigned int)1000, "population-max", "Population max", 'P', section).value(); // P
unsigned int p_step = parser.createParam((unsigned int)10, "population-step", "Population step", 't', section).value(); // t unsigned int p_step = parser.createParam((unsigned int)50, "population-step", "Population step", 't', section).value(); // t
unsigned int s_size = parser.createParam((unsigned int)2, "dimension-size", "Dimension size", 'd', section).value(); // d unsigned int s_size = parser.createParam((unsigned int)2, "dimension-size", "Dimension size", 'd', section).value(); // d
AtomType mean_value = parser.createParam((AtomType)0, "mean", "Mean value", 'm', section).value(); // m AtomType mean_value = parser.createParam((AtomType)0, "mean", "Mean value", 'm', section).value(); // m
@ -37,6 +41,9 @@ int main(int ac, char** av)
AtomType covar2_value = parser.createParam((AtomType)0.5, "covar2", "Covar value 2", '2', section).value(); // 2 AtomType covar2_value = parser.createParam((AtomType)0.5, "covar2", "Covar value 2", '2', section).value(); // 2
AtomType covar3_value = parser.createParam((AtomType)1.0, "covar3", "Covar value 3", '3', section).value(); // 3 AtomType covar3_value = parser.createParam((AtomType)1.0, "covar3", "Covar value 3", '3', section).value(); // 3
std::string results_directory = parser.createParam((std::string)"means_distances_results", "results-directory", "Results directory", 'R', section).value(); // R
std::string files_description = parser.createParam((std::string)"files_description.txt", "files-description", "Files description", 'F', section).value(); // F
if (parser.userNeedsHelp()) if (parser.userNeedsHelp())
{ {
parser.printHelp(std::cout); parser.printHelp(std::cout);
@ -48,18 +55,34 @@ int main(int ac, char** av)
//----------------------------------------------------- //-----------------------------------------------------
assert(r_max >= 1);
assert(s_size >= 2); assert(s_size >= 2);
eo::log << eo::debug << "p_size s_size mean(0) mean(1) new-mean(0) new-mean(1) distance" << std::endl; eo::log << eo::quiet;
eo::log << eo::logging; ::mkdir( results_directory.c_str(), 0755 );
for ( unsigned int p_size = p_min; p_size <= p_max; p_size *= p_step ) for ( unsigned int p_size = p_min; p_size <= p_max; p_size += p_step )
{ {
assert(p_size >= p_min); assert(p_size >= p_min);
std::ostringstream desc_file;
desc_file << results_directory << "/" << files_description;
std::ostringstream cur_file;
cur_file << results_directory << "/pop_" << p_size << ".txt";
eo::log << eo::file( desc_file.str() ) << cur_file.str().c_str() << std::endl;
eo::log << eo::file( cur_file.str() );
eo::log << eo::logging << "run_number p_size s_size mean(0) mean(1) new-mean(0) new-mean(1) distance" << std::endl;
eo::log << eo::quiet;
for ( unsigned int r = 1; r <= r_max; ++r)
{
eoState state; eoState state;
@ -162,7 +185,7 @@ int main(int ac, char** av)
distance = sqrt( distance ); distance = sqrt( distance );
eo::log << p_size << " " << s_size << " " eo::log << r << " " << p_size << " " << s_size << " "
<< mean(0) << " " << mean(1) << " " << mean(0) << " " << mean(1) << " "
<< new_mean(0) << " " << new_mean(1) << " " << new_mean(0) << " " << new_mean(1) << " "
<< distance << std::endl << distance << std::endl
@ -172,5 +195,7 @@ int main(int ac, char** av)
} }
}
return 0; return 0;
} }