From b2ce7bedb6b9416de1ae8800b00f18c31aff9aca Mon Sep 17 00:00:00 2001
From: kuepper <kuepper>
Date: Fri, 1 Dec 2006 20:08:51 +0000
Subject: [PATCH] * Makefile.am: Update for release-distribution.

* Makefile.am: Add missing CMA header for distribution.

* Makefile.am: Add missing header for distribution.
---
 eo/doc/ChangeLog         | 11 +++++++++++
 eo/doc/Makefile.am       |  3 ++-
 eo/src/es/ChangeLog      |  4 ++++
 eo/src/es/Makefile.am    |  8 +++++---
 eo/src/utils/ChangeLog   |  4 ++++
 eo/src/utils/Makefile.am |  1 +
 6 files changed, 27 insertions(+), 4 deletions(-)
 create mode 100644 eo/doc/ChangeLog

diff --git a/eo/doc/ChangeLog b/eo/doc/ChangeLog
new file mode 100644
index 00000000..c7a188cc
--- /dev/null
+++ b/eo/doc/ChangeLog
@@ -0,0 +1,11 @@
+2006-12-01  Jochen Küpper  <jochen@fhi-berlin.mpg.de>
+
+	* Makefile.am: Update for release-distribution.
+	
+
+
+	* Local Variables:
+	* coding: iso-8859-1
+	* mode: flyspell
+	* fill-column: 80
+	* End:
diff --git a/eo/doc/Makefile.am b/eo/doc/Makefile.am
index 1d82cf01..885cfdb7 100644
--- a/eo/doc/Makefile.am
+++ b/eo/doc/Makefile.am
@@ -1,7 +1,8 @@
 ## Makefile.am for eo/doc
 
 
-EXTRA_DIST 		= eo.cfg foot.html
+EXTRA_DIST 		= EO_EA2001.pdf LeCreusot.pdf eo.cfg index.h \
+			mainpage.html publications.html sflogo-hammer1.jpg
 
 doc:
 			cd $(srcdir) && $(DOXYGEN) eo.cfg
diff --git a/eo/src/es/ChangeLog b/eo/src/es/ChangeLog
index dca32ab1..29437b42 100644
--- a/eo/src/es/ChangeLog
+++ b/eo/src/es/ChangeLog
@@ -1,3 +1,7 @@
+2006-12-01  Jochen Küpper  <jochen@fhi-berlin.mpg.de>
+
+	* Makefile.am: Add missing CMA header for distribution.
+
 2006-11-16  Jochen Küpper  <jochen@fhi-berlin.mpg.de>
 
 	* make_genotype_real.h (eoEsChromInit): Rewrite vecSigmaInit-handling:
diff --git a/eo/src/es/Makefile.am b/eo/src/es/Makefile.am
index 6a4b827d..d9c280df 100644
--- a/eo/src/es/Makefile.am
+++ b/eo/src/es/Makefile.am
@@ -46,9 +46,11 @@ libcma_a_SOURCES	= eig.cpp \
 
 cmaincludedir		= $(pkgincludedir)/es
 
-cmainclude_HEADERS	= eig.h \
+cmainclude_HEADERS	=  CMAParams.h \
 			CMAState.h \
-			matrices.h \
-			CMAParams.h 
+			eig.h \
+			eoCMAInit.h \
+			eoCMABreed.h \
+			matrices.h 
 
 AM_CXXFLAGS		= -I$(top_srcdir)/src
diff --git a/eo/src/utils/ChangeLog b/eo/src/utils/ChangeLog
index 6e9599d9..d7de4dff 100644
--- a/eo/src/utils/ChangeLog
+++ b/eo/src/utils/ChangeLog
@@ -1,3 +1,7 @@
+2006-12-01  Jochen Küpper  <jochen@fhi-berlin.mpg.de>
+
+	* Makefile.am: Add missing header for distribution.
+
 2006-11-30  Jochen Küpper  <jochen@fhi-berlin.mpg.de>
 
 	* eoRNG.h: Generally include <cmath>
diff --git a/eo/src/utils/Makefile.am b/eo/src/utils/Makefile.am
index 18c8b1ae..fc807253 100644
--- a/eo/src/utils/Makefile.am
+++ b/eo/src/utils/Makefile.am
@@ -47,6 +47,7 @@ utilsinclude_HEADERS 	= checkpointing \
 			eoState.h \
 			eoStdoutMonitor.h \
 			eoTimeCounter.h \
+			eoTimedMonitor.h \
 			eoUniformInit.h \
 			eoUpdatable.h \
 			eoUpdater.h \