Removed a few dsp files and changed saving/loading eoPops a bit.

This commit is contained in:
mac 2000-08-14 11:18:34 +00:00
commit 4f1bcfa292
33 changed files with 59 additions and 2767 deletions

View file

@ -60,7 +60,7 @@ class eoFixedLength : public EO<FitT>, public std::vector<GeneType>
os << size() << ' ';
std::copy(begin(), end(), ostream_iterator<double>(os));
std::copy(begin(), end(), ostream_iterator<double>(os, " "));
}
/// reading...

View file

@ -90,24 +90,6 @@ class eoPop: public vector<EOT>, public eoObject, public eoPersistent
///
~eoPop() {};
/** @name Methods from eoObject */
//@{
/**
* Read object. The EOT class must have a ctor from a stream;
in this case, a strstream is used.
* @param _is A istream.
*/
virtual void readFrom(istream& _is)
{
while( _is )
{
EOT thisEOT;
thisEOT.readFrom( _is );
push_back( thisEOT );
}
}
/**
sort the population. Use this member to sort in order
of descending Fitness, so the first individual is the best!
@ -166,10 +148,33 @@ class eoPop: public vector<EOT>, public eoObject, public eoPersistent
* Write object. It's called printOn since it prints the object _on_ a stream.
* @param _os A ostream.
*/
virtual void printOn(ostream& _os) const {
copy( begin(), end(), ostream_iterator<EOT>( _os, "\n") );
virtual void printOn(ostream& _os) const
{
_os << size() << '\n';
copy( begin(), end(), ostream_iterator<EOT>( _os, "\n") );
};
/** @name Methods from eoObject */
//@{
/**
* Read object. The EOT class must have a ctor from a stream;
in this case, a strstream is used.
* @param _is A istream.
*/
virtual void readFrom(istream& _is)
{
size_t sz;
_is >> sz;
resize(sz);
for (size_t i = 0; i < sz; ++i)
{
operator[](i).readFrom( _is );
}
}
/** Inherited from eoObject. Returns the class name.
@see eoObject
*/

View file

@ -75,10 +75,13 @@ class eoScalarFitness
};
/**
Typedefs for fitness comparison,
Typedefs for fitness comparison, Maximizing Fitness compares with less,
and minimizing fitness compares with greater. This because we want ordinary
fitness values (doubles) to be equivalent with Maximizing Fitness, and
comparing with less is the default behaviour.
*/
typedef eoScalarFitness<double, std::greater<double> > eoMaximizingFitness;
typedef eoScalarFitness<double, std::less<double> > eoMinimizingFitness;
typedef eoScalarFitness<double, std::less<double> > eoMaximizingFitness;
typedef eoScalarFitness<double, std::greater<double> > eoMinimizingFitness;
template <class F, class Cmp>
std::ostream& operator<<(std::ostream& os, const eoScalarFitness<F, Cmp>& f)

View file

@ -51,11 +51,11 @@ class eoEsFull : public eoFixedLength<Fit, double>
eoFixedLength<Fit,double>::printOn(os);
os << ' ';
std::copy(stdevs.begin(), stdevs.end(), std::ostream_iterator<double>(os));
std::copy(stdevs.begin(), stdevs.end(), std::ostream_iterator<double>(os, " "));
os << ' ';
std::copy(correlations.begin(), correlations.end(), std::ostream_iterator<double>(os));
std::copy(correlations.begin(), correlations.end(), std::ostream_iterator<double>(os, " "));
os << ' ';
}

View file

@ -52,7 +52,7 @@ class eoEsStdev : public eoFixedLength<Fit, double>
eoFixedLength<Fit,double>::printOn(os);
os << ' ';
std::copy(stdevs.begin(), stdevs.end(), std::ostream_iterator<double>(os));
std::copy(stdevs.begin(), stdevs.end(), std::ostream_iterator<double>(os, " "));
os << ' ';
}

View file

@ -25,7 +25,7 @@ using namespace std;
typedef eoMinimizingFitness FitT;
template <class EOT>
void runAlgorithm(EOT, eoParser& _parser, eoState& _state, eoEsObjectiveBounds& _bounds);
void runAlgorithm(EOT, eoParser& _parser, eoState& _state, eoEsObjectiveBounds& _bounds, eoValueParam<string> _load_name);
int main(int argc, char *argv[])
{
@ -61,15 +61,15 @@ int main(int argc, char *argv[])
// Run the appropriate algorithm
if (stdevs.value() == false && corr.value() == false)
{
runAlgorithm(eoEsSimple<FitT>() ,parser, state, bounds);
runAlgorithm(eoEsSimple<FitT>() ,parser, state, bounds, load_name);
}
else if (corr.value() == true)
{
runAlgorithm(eoEsFull<FitT>(),parser, state, bounds);
runAlgorithm(eoEsFull<FitT>(),parser, state, bounds, load_name);
}
else
{
runAlgorithm(eoEsStdev<FitT>(), parser, state, bounds);
runAlgorithm(eoEsStdev<FitT>(), parser, state, bounds, load_name);
}
// and save
@ -84,7 +84,7 @@ int main(int argc, char *argv[])
}
template <class EOT>
void runAlgorithm(EOT, eoParser& _parser, eoState& _state, eoEsObjectiveBounds& _bounds)
void runAlgorithm(EOT, eoParser& _parser, eoState& _state, eoEsObjectiveBounds& _bounds, eoValueParam<string> _load_name)
{
// evaluation
eoEvalFuncPtr<EOT, double, const vector<double>&> eval( real_value );
@ -100,13 +100,22 @@ void runAlgorithm(EOT, eoParser& _parser, eoState& _state, eoEsObjectiveBounds&
// Initialization
eoEsChromInit<EOT> init(_bounds);
// State takes ownership of pop because it needs to save it in caller
eoPop<EOT>& pop = _state.takeOwnership(eoPop<EOT>(mu.value(), init));
_state.registerObject(pop);
// evaluate initial population
apply<EOT>(eval, pop);
if (!_load_name.value().empty())
{ // The real loading happens here when all objects are registered
_state.load(_load_name.value()); // load all and everything
}
else
{
// evaluate initial population
apply<EOT>(eval, pop);
}
// Ok, time to set up the algorithm
// Proxy for the mutation parameters
eoEsMutationInit mutateInit(_parser);
@ -119,7 +128,7 @@ void runAlgorithm(EOT, eoParser& _parser, eoState& _state, eoEsObjectiveBounds&
monitor.add(average);
eoGenContinue<EOT> cnt(2000);
eoGenContinue<EOT> cnt(20);
eoCheckPoint<EOT> checkpoint(cnt);
checkpoint.add(monitor);
checkpoint.add(average);

View file

@ -153,7 +153,6 @@ void main_function()
eoPop<Chrom> pop(100, init);
apply<Chrom>(eval, pop);
//for_each(pop.begin(), pop.end(), eval);
sga(pop);
@ -182,6 +181,7 @@ void main_function()
}
//-----------------------------------------------------------------------------
// For MSVC memory lead detection
#ifdef _MSC_VER
#include <crtdbg.h>
#endif

View file

@ -1,299 +0,0 @@
Microsoft Developer Studio Workspace File, Format Version 6.00
# WARNING: DO NOT EDIT OR DELETE THIS WORKSPACE FILE!
###############################################################################
Project: "eo"=.\eo.dsp - Package Owner=<4>
Package=<5>
{{{
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Package=<4>
{{{
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###############################################################################
Project: "t_eoRegression"=.\t_eoRegression.dsp - Package Owner=<4>
Package=<5>
{{{
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Package=<4>
{{{
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Project_Dep_Name eo
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###############################################################################
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Package=<5>
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View file

@ -1,7 +1,5 @@
#Some dsps are missing here
EXTRA_DIST=EO.dsw random.dsp t_eoinsertion.dsp t_ops.dsp\
atomops.dsp t_eoaged.dsp t_eornd.dsp t_opsel.dsp\
t_eobin.dsp t_eostring.dsp t_opselmason.dsp\
eo.dsp t_eobitfact.dsp t_eovector.dsp t_pop.dsp\
t_eobreeder.dsp t_es.dsp t_popops.dsp\
eolib.dsp t_eoid.dsp t_lottery.dsp\
EXTRA_DIST=eo_win.dsw eo.dsp esfull.dsp t_eobin.dsp t_eoCheckpointing.dsp t_eofitness.dsp \
t_eoFunctor.dsp t_externalEO.dsp t_StateAndParser.dsp

View file

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View file

@ -75,21 +75,6 @@ Package=<4>
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@ -105,21 +90,6 @@ Package=<4>
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View file

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View file

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View file

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View file

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View file

@ -1,103 +0,0 @@
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View file

@ -1,101 +0,0 @@
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View file

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View file

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View file

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