* EO.tpl, MyStructEA.cpp, MyStructSEA.cpp, make_MyStruct.cpp: Use

correct names for includes.

* README.manual: This is a copy of the old README.

* README: Describe the new way and setup of creating a new EO project.

* createEOproject.sh, Makefile.am.src-tmpl, Makefile.am.top-tmpl:
* configure.ac.tmpl: New files to create a standalone EO project from
templates.
This commit is contained in:
kuepper 2006-12-16 21:55:03 +00:00
commit 301e29ac02
12 changed files with 445 additions and 265 deletions

View file

@ -0,0 +1,19 @@
2006-12-16 Jochen Küpper <jochen@fhi-berlin.mpg.de>
* EO.tpl, MyStructEA.cpp, MyStructSEA.cpp, make_MyStruct.cpp: Use
correct names for includes.
* README.manual: This is a copy of the old README.
* README: Describe the new way and setup of creating a new EO project.
* createEOproject.sh, Makefile.am.src-tmpl, Makefile.am.top-tmpl:
* configure.ac.tmpl: New files to create a standalone EO project from
templates.
* Local Variables:
* coding: iso-8859-1
* mode: flyspell
* fill-column: 80
* End:

View file

@ -95,32 +95,32 @@ typedef EASEAGenome<MyFitT> Indi; // ***MUST*** derive from EO
// how to initialize the population // how to initialize the population
// it IS representation independent if an eoInit is given // it IS representation independent if an eoInit is given
#include <do/make_pop.h> #include <make_pop.h>
eoPop<Indi >& make_pop(eoParser& _parser, eoState& _state, eoInit<Indi> & _init){ eoPop<Indi >& make_pop(eoParser& _parser, eoState& _state, eoInit<Indi> & _init){
return do_make_pop(_parser, _state, _init); return do_make_pop(_parser, _state, _init);
} }
// the stopping criterion // the stopping criterion
#include "do/make_continue.h" #include "make_continue.h"
eoContinue<Indi>& make_continue(eoParser& _parser, eoState& _state, eoEvalFuncCounter<Indi> & _eval){ eoContinue<Indi>& make_continue(eoParser& _parser, eoState& _state, eoEvalFuncCounter<Indi> & _eval){
return do_make_continue(_parser, _state, _eval); return do_make_continue(_parser, _state, _eval);
} }
// outputs (stats, population dumps, ...) // outputs (stats, population dumps, ...)
#include <do/make_checkpoint.h> #include <make_checkpoint.h>
eoCheckPoint<Indi>& make_checkpoint(eoParser& _parser, eoState& _state, eoEvalFuncCounter<Indi>& _eval, eoContinue<Indi>& _continue) { eoCheckPoint<Indi>& make_checkpoint(eoParser& _parser, eoState& _state, eoEvalFuncCounter<Indi>& _eval, eoContinue<Indi>& _continue) {
return do_make_checkpoint(_parser, _state, _eval, _continue); return do_make_checkpoint(_parser, _state, _eval, _continue);
} }
// evolution engine (selection and replacement) // evolution engine (selection and replacement)
#include <do/make_algo_easea.h> #include <make_algo_easea.h>
eoAlgo<Indi>& make_algo_scalar(eoParser& _parser, eoState& _state, eoEvalFunc<Indi>& _eval, eoContinue<Indi>& _continue, eoGenOp<Indi>& _op){ eoAlgo<Indi>& make_algo_scalar(eoParser& _parser, eoState& _state, eoEvalFunc<Indi>& _eval, eoContinue<Indi>& _continue, eoGenOp<Indi>& _op){
return do_make_algo_scalar(_parser, _state, _eval, _continue, _op); return do_make_algo_scalar(_parser, _state, _eval, _continue, _op);
} }
// simple call to the algo. stays there for consistency reasons // simple call to the algo. stays there for consistency reasons
// no template for that one // no template for that one
#include <do/make_run.h> #include <make_run.h>
// the instanciating fitnesses // the instanciating fitnesses
#include <eoScalarFitness.h> #include <eoScalarFitness.h>
void run_ea(eoAlgo<Indi>& _ga, eoPop<Indi>& _pop){ void run_ea(eoAlgo<Indi>& _ga, eoPop<Indi>& _pop){

View file

@ -0,0 +1,16 @@
bin_PROGRAMS = MyStruct
MyStruct_SOURCES = MyStructEA.cpp \
eoMyStruct.h \
eoMyStructEvalFunc.h \
eoMyStructInit.h \
eoMyStructMutation.h \
eoMyStructQuadCrossover.h
dnl Local Variables:
dnl coding: iso-8859-1
dnl mode: makefile-automake
dnl fill-column: 80
dnl End:

View file

@ -0,0 +1,8 @@
SUBDIRS = src
dnl Local Variables:
dnl coding: iso-8859-1
dnl mode: makefile-automake
dnl fill-column: 80
dnl End:

View file

@ -77,28 +77,28 @@ eoGenOp<Indi>& make_op(eoParser& _parser, eoState& _state, eoInit<Indi>& _init)
// how to initialize the population // how to initialize the population
// it IS representation independent if an eoInit is given // it IS representation independent if an eoInit is given
#include <do/make_pop.h> #include <make_pop.h>
eoPop<Indi >& make_pop(eoParser& _parser, eoState& _state, eoInit<Indi> & _init) eoPop<Indi >& make_pop(eoParser& _parser, eoState& _state, eoInit<Indi> & _init)
{ {
return do_make_pop(_parser, _state, _init); return do_make_pop(_parser, _state, _init);
} }
// the stopping criterion // the stopping criterion
#include <do/make_continue.h> #include <make_continue.h>
eoContinue<Indi>& make_continue(eoParser& _parser, eoState& _state, eoEvalFuncCounter<Indi> & _eval) eoContinue<Indi>& make_continue(eoParser& _parser, eoState& _state, eoEvalFuncCounter<Indi> & _eval)
{ {
return do_make_continue(_parser, _state, _eval); return do_make_continue(_parser, _state, _eval);
} }
// outputs (stats, population dumps, ...) // outputs (stats, population dumps, ...)
#include <do/make_checkpoint.h> #include <make_checkpoint.h>
eoCheckPoint<Indi>& make_checkpoint(eoParser& _parser, eoState& _state, eoEvalFuncCounter<Indi>& _eval, eoContinue<Indi>& _continue) eoCheckPoint<Indi>& make_checkpoint(eoParser& _parser, eoState& _state, eoEvalFuncCounter<Indi>& _eval, eoContinue<Indi>& _continue)
{ {
return do_make_checkpoint(_parser, _state, _eval, _continue); return do_make_checkpoint(_parser, _state, _eval, _continue);
} }
// evolution engine (selection and replacement) // evolution engine (selection and replacement)
#include <do/make_algo_scalar.h> #include <make_algo_scalar.h>
eoAlgo<Indi>& make_algo_scalar(eoParser& _parser, eoState& _state, eoEvalFunc<Indi>& _eval, eoContinue<Indi>& _continue, eoGenOp<Indi>& _op) eoAlgo<Indi>& make_algo_scalar(eoParser& _parser, eoState& _state, eoEvalFunc<Indi>& _eval, eoContinue<Indi>& _continue, eoGenOp<Indi>& _op)
{ {
return do_make_algo_scalar(_parser, _state, _eval, _continue, _op); return do_make_algo_scalar(_parser, _state, _eval, _continue, _op);
@ -106,7 +106,7 @@ eoAlgo<Indi>& make_algo_scalar(eoParser& _parser, eoState& _state, eoEvalFunc<I
// simple call to the algo. stays there for consistency reasons // simple call to the algo. stays there for consistency reasons
// no template for that one // no template for that one
#include <do/make_run.h> #include <make_run.h>
// the instanciating fitnesses // the instanciating fitnesses
#include <eoScalarFitness.h> #include <eoScalarFitness.h>
void run_ea(eoAlgo<Indi>& _ga, eoPop<Indi>& _pop) void run_ea(eoAlgo<Indi>& _ga, eoPop<Indi>& _pop)

View file

@ -73,28 +73,28 @@ typedef eoMyStruct<MyFitT> Indi; // ***MUST*** derive from EO
// how to initialize the population // how to initialize the population
// it IS representation independent if an eoInit is given // it IS representation independent if an eoInit is given
#include <do/make_pop.h> #include <make_pop.h>
eoPop<Indi >& make_pop(eoParser& _parser, eoState& _state, eoInit<Indi> & _init) eoPop<Indi >& make_pop(eoParser& _parser, eoState& _state, eoInit<Indi> & _init)
{ {
return do_make_pop(_parser, _state, _init); return do_make_pop(_parser, _state, _init);
} }
// the stopping criterion // the stopping criterion
#include <do/make_continue.h> #include <make_continue.h>
eoContinue<Indi>& make_continue(eoParser& _parser, eoState& _state, eoEvalFuncCounter<Indi> & _eval) eoContinue<Indi>& make_continue(eoParser& _parser, eoState& _state, eoEvalFuncCounter<Indi> & _eval)
{ {
return do_make_continue(_parser, _state, _eval); return do_make_continue(_parser, _state, _eval);
} }
// outputs (stats, population dumps, ...) // outputs (stats, population dumps, ...)
#include <do/make_checkpoint.h> #include <make_checkpoint.h>
eoCheckPoint<Indi>& make_checkpoint(eoParser& _parser, eoState& _state, eoEvalFuncCounter<Indi>& _eval, eoContinue<Indi>& _continue) eoCheckPoint<Indi>& make_checkpoint(eoParser& _parser, eoState& _state, eoEvalFuncCounter<Indi>& _eval, eoContinue<Indi>& _continue)
{ {
return do_make_checkpoint(_parser, _state, _eval, _continue); return do_make_checkpoint(_parser, _state, _eval, _continue);
} }
// evolution engine (selection and replacement) // evolution engine (selection and replacement)
#include <do/make_algo_scalar.h> #include <make_algo_scalar.h>
eoAlgo<Indi>& make_algo_scalar(eoParser& _parser, eoState& _state, eoEvalFunc<Indi>& _eval, eoContinue<Indi>& _continue, eoGenOp<Indi>& _op, eoDistance<Indi> *_dist = NULL) eoAlgo<Indi>& make_algo_scalar(eoParser& _parser, eoState& _state, eoEvalFunc<Indi>& _eval, eoContinue<Indi>& _continue, eoGenOp<Indi>& _op, eoDistance<Indi> *_dist = NULL)
{ {
return do_make_algo_scalar(_parser, _state, _eval, _continue, _op, _dist); return do_make_algo_scalar(_parser, _state, _eval, _continue, _op, _dist);
@ -102,7 +102,7 @@ eoAlgo<Indi>& make_algo_scalar(eoParser& _parser, eoState& _state, eoEvalFunc<I
// simple call to the algo. stays there for consistency reasons // simple call to the algo. stays there for consistency reasons
// no template for that one // no template for that one
#include <do/make_run.h> #include <make_run.h>
// the instanciating fitnesses // the instanciating fitnesses
#include <eoScalarFitness.h> #include <eoScalarFitness.h>
void run_ea(eoAlgo<Indi>& _ga, eoPop<Indi>& _pop) void run_ea(eoAlgo<Indi>& _ga, eoPop<Indi>& _pop)

View file

@ -1,149 +1,15 @@
Quick NOTE: This version of README is obsolete (May 25, 2004) This Templates directory contains template files of an EO project and
In particular, a simpler version of the algorithm can be generated a script createEOproject.sh to create a complete new EO project.
using the script
createSimple
with the same syntax. It is also more powerful, allowing for instance The template requires a complete installation of EO.
to create you own statistics on the population, saving it in a file
and/or plotting on on-line during the run (see eoStat.tmpl).
More details some day, when I have some time ...
============= Old README (most is still accurate, though) ========== In particular, the C++ compiler must find the EO include files and the
linker must find the EO libraries. Most probably, that means that you
have to set the variables CPLUS_INCLUDE_PATH and LIBRARY_PATH, i.e.
for a standard installation and using tcsh:
This directory contains sample files that should make it easy to setenv CPLUS_INCLUDE_PATH /usr/local/include/eo:"$CPLUS_INCLUDE_PATH"
create an EO algorithm to evolve any type of structure setenv LIBRARY_PATH /usr/local/lib:"$LIBRARY_PATH"
(EO comes with two examples, bitstrings and vector of real variables,
so you'll need this as soon as you want to evolve something else).
At the moment, only algorithms involving a scalar fitness (double)
are implemented (see test dir for Pareto optimization of multiple-
objective fitness - or be patient :-)
This file will help you to build the same algorithm than the ones See README.manual for more details.
in the Lesson4 of the tutorial, but with YOUR genotype instead of
bitstrings or vector<double>. More details in Lesson5 of the tutorial.
It is assumed in the following that you have read the first part of
the tutorial (Lessons 1 to 4).
Creating the algorithm for your genotype
----------------------------------------
In what follows, we will suppose that you want to evolve some data
structure, and that you have enough programming skills to be able to
write C code for its random initilialization, its crossover, its
mutation and the computation of its fitness.
The helper script * create.sh * will create for you the files you need
from the samples in tutorial/Templates dir, and all you'll have to do
is to include the actual code where indicated in those files (between
keywords START and END).
First, let's choose a name: let's call the new EO class eoAppli.
All newly created classes will be named eoAppliXXX (in the file
eoAppliXXX)
1- cd to the tutorial dir
2- create the directory for your application (let's assume you call it
APPLICATION): type in
mkdir APPLICATION
3- go to the Templates dir
cd Templates
and run the helper script create.sh with the following arguments
./create.sh Appli ../APPLICATION
4- cd to the APPLICATION dir (cd ../APPLICATION).
You should see there the following files:
AppliEA.cpp the main file, includes all other, to be compiled
Makefile with default target eoAppliEA
eoAppli.h class eoAppli<FitT>, FitT = template fitness
eoAppliEvalFunc.h class for the computation of fotness
eoAppliInit.h class for genotype initlialization
eoAppliMutation.h class for mutation
eoAppliQuadCrossover.h class for (quadratic) crossover
make_genotype_Appli.h helper function that create the initializer
make_op_Appli.h helper function that creates the variatin operators
Note: You can go directly to step 6 and 7: you'll get a lot of
warnings, but will be able to run an EA that does nothing!
5- Edit those files to suit your needs. The minimal addition you'll need
to make are
in eoAppli.h define your genotype
in eoAppliInit.h define the initialization of one genotype
in eoAppliMutation.h define the mutation of one genotype
in eoAppliQuadCrossover.h define the crossover of 2 genotypes
HINT: look for keywords START and END and modify code in between.
6- Compile eoAppliEA.cpp. If your APPLICATION dir is in the tutorial
dir, you don't need to modify Makefile. Just type in
% make
7- Run the resulting program:
% eoAppliEA
The default output is one line per generation with the generation
number, the number of evaluations performed, the best and average
fitnesses in the population.
The algorithm stops by default after 100 generations.
8- Customize the parameters: copy eoAppliEA.status into
e.g. eoAppliEA.param, edit eoAppliEA.param (uncomment the lines you
want to become active), and run
% eoAppliEA @eoAppliEA.param
(see the Lesson 5 of the tutorial for more details now).
HINTS
-----
1- If some new classes you create require some user parameter, you can
either read them in the file where they are created (e.g.
make_op_Appli.h for variation operators), or pass the eoParser to the
constructor of the class, and read the parameter from the parser.
2- If you stick to privacy for the data in your EO class, you will
probably need to write accessors to those data, as well as some public
methods to modify them, as soon as some other methods need them too.
3- The sample make_op_Appli.h supposes that you ony have one crossover
and one mutation operator. However, the code for multiple operators is
there: you can have for instance 2 crossover operators, and choose
among them according to relative weights (proportional choice) - same
for mutation. Look at the operator section in eoAppliEA.cpp In
particular, the user parameters cross1Rate and mut1Rate are totally
useless for a single operator.
To add another operator, you have to create another class by mimicking
what has been done for the first operator.
For instance, let's suppose you want to create another mutation.
* duplicate the code for eoAppliMutation class
* in the second version, change the class name (eoAppliMutation) into
another name (let's say eoAppliBetterMutation) - you must change the
name in the class declaration, in the constructor and in the
className() method.
* in the new eoAppliBetterMutation class, change the code for the
operator() - and eventually the code for the constructor.
* in the make_op_Appli.h file, in the mutation section, uncomment the
lines
mut = new eoAppliSecondMutation<Indi>(varType _anyVariable);
_state.storeFunctor(mut);
double mut2Rate = _parser.createParam(1.0, "mut2Rate", "Relative rate for mutation 2", '2', "Variation Operators").value();
propMutation.add(*mut, mut2Rate);
and change the name of the class from eoAppliSecondMutation to your
name eoAppliBetterMutation (you can also change the keyword from
mut2Rate to something more meaningful like BetterMutationRate).
You're done!
In case of problem: Marc.Schoenauer@inria.fr

View file

@ -0,0 +1,143 @@
This is the old template-directory README. Most of this information is
still accurate and it contains more details than the new README.
However, see there first for the creation of new projects.
========================================================================
This directory contains sample files that should make it easy to
create an EO algorithm to evolve any type of structure
(EO comes with two examples, bitstrings and vector of real variables,
so you'll need this as soon as you want to evolve something else).
At the moment, only algorithms involving a scalar fitness (double)
are implemented (see test dir for Pareto optimization of multiple-
objective fitness - or be patient :-)
This file will help you to build the same algorithm than the ones
in the Lesson4 of the tutorial, but with YOUR genotype instead of
bitstrings or vector<double>. More details in Lesson5 of the tutorial.
It is assumed in the following that you have read the first part of
the tutorial (Lessons 1 to 4).
Creating the algorithm for your genotype
----------------------------------------
In what follows, we will suppose that you want to evolve some data
structure, and that you have enough programming skills to be able to
write C code for its random initilialization, its crossover, its
mutation and the computation of its fitness.
The helper script * create.sh * will create for you the files you need
from the samples in tutorial/Templates dir, and all you'll have to do
is to include the actual code where indicated in those files (between
keywords START and END).
First, let's choose a name: let's call the new EO class eoAppli.
All newly created classes will be named eoAppliXXX (in the file
eoAppliXXX)
1- cd to the tutorial dir
2- create the directory for your application (let's assume you call it
APPLICATION): type in
mkdir APPLICATION
3- go to the Templates dir
cd Templates
and run the helper script create.sh with the following arguments
./create.sh Appli ../APPLICATION
4- cd to the APPLICATION dir (cd ../APPLICATION).
You should see there the following files:
AppliEA.cpp the main file, includes all other, to be compiled
Makefile with default target eoAppliEA
eoAppli.h class eoAppli<FitT>, FitT = template fitness
eoAppliEvalFunc.h class for the computation of fotness
eoAppliInit.h class for genotype initlialization
eoAppliMutation.h class for mutation
eoAppliQuadCrossover.h class for (quadratic) crossover
make_genotype_Appli.h helper function that create the initializer
make_op_Appli.h helper function that creates the variatin operators
Note: You can go directly to step 6 and 7: you'll get a lot of
warnings, but will be able to run an EA that does nothing!
5- Edit those files to suit your needs. The minimal addition you'll need
to make are
in eoAppli.h define your genotype
in eoAppliInit.h define the initialization of one genotype
in eoAppliMutation.h define the mutation of one genotype
in eoAppliQuadCrossover.h define the crossover of 2 genotypes
HINT: look for keywords START and END and modify code in between.
6- Compile eoAppliEA.cpp. If your APPLICATION dir is in the tutorial
dir, you don't need to modify Makefile. Just type in
% make
7- Run the resulting program:
% eoAppliEA
The default output is one line per generation with the generation
number, the number of evaluations performed, the best and average
fitnesses in the population.
The algorithm stops by default after 100 generations.
8- Customize the parameters: copy eoAppliEA.status into
e.g. eoAppliEA.param, edit eoAppliEA.param (uncomment the lines you
want to become active), and run
% eoAppliEA @eoAppliEA.param
(see the Lesson 5 of the tutorial for more details now).
HINTS
-----
1- If some new classes you create require some user parameter, you can
either read them in the file where they are created (e.g.
make_op_Appli.h for variation operators), or pass the eoParser to the
constructor of the class, and read the parameter from the parser.
2- If you stick to privacy for the data in your EO class, you will
probably need to write accessors to those data, as well as some public
methods to modify them, as soon as some other methods need them too.
3- The sample make_op_Appli.h supposes that you ony have one crossover
and one mutation operator. However, the code for multiple operators is
there: you can have for instance 2 crossover operators, and choose
among them according to relative weights (proportional choice) - same
for mutation. Look at the operator section in eoAppliEA.cpp In
particular, the user parameters cross1Rate and mut1Rate are totally
useless for a single operator.
To add another operator, you have to create another class by mimicking
what has been done for the first operator.
For instance, let's suppose you want to create another mutation.
* duplicate the code for eoAppliMutation class
* in the second version, change the class name (eoAppliMutation) into
another name (let's say eoAppliBetterMutation) - you must change the
name in the class declaration, in the constructor and in the
className() method.
* in the new eoAppliBetterMutation class, change the code for the
operator() - and eventually the code for the constructor.
* in the make_op_Appli.h file, in the mutation section, uncomment the
lines
mut = new eoAppliSecondMutation<Indi>(varType _anyVariable);
_state.storeFunctor(mut);
double mut2Rate = _parser.createParam(1.0, "mut2Rate", "Relative rate for mutation 2", '2', "Variation Operators").value();
propMutation.add(*mut, mut2Rate);
and change the name of the class from eoAppliSecondMutation to your
name eoAppliBetterMutation (you can also change the keyword from
mut2Rate to something more meaningful like BetterMutationRate).
You're done!
In case of problem: Marc.Schoenauer@inria.fr

View file

@ -0,0 +1,10 @@
This is an autogenerated EO project
Fill in the marked code-snippets in the files in src/ and you have a
complete EA project.
The project has a complete build-infrastructure based on
automake/autoconf. You can simply run "make" in this directory to have
the program compiled. The executable build will be in src/.
Enjoy!

View file

@ -0,0 +1,39 @@
# EO template autogeneration configure.ac template
#
# Copyright (C) 2006 Jochen Küpper <jochen@fhi-berlin.mpg.de>
#
dnl Process this file with autoconf to produce a configure script.
AC_INIT(MyStruct, 0.1)
AC_CONFIG_SRCDIR(src/eoMyStruct.h)
AM_INIT_AUTOMAKE
AC_CONFIG_HEADERS(config.h)
dnl Checks for programs.
AC_PROG_CC
AC_PROG_CXX
AC_ISC_POSIX
dnl Checks for header files.
AC_STDC_HEADERS
AC_LANG(C++)
AC_CHECK_HEADERS([eo], [], [AC_ERROR(Evolving Objects headers are required)])
dnl Checks for libraries.
AC_LANG(C++)
AC_CHECK_LIB([eoutils], [main], [],
AC_MSG_ERROR([Evolving Objects utility library is required.]))
AC_CHECK_LIB([eo], [main], [],
AC_MSG_ERROR([Evolving Objects library is required.]))
AC_CHECK_LIB([es], [main], [],
AC_MSG_ERROR([EO Evolutionary strategies library is required.]))
dnl Checks for library functions.
AC_OUTPUT([Makefile src/Makefile])
dnl Local Variables:
dnl coding: iso-8859-1
dnl mode: autoconf
dnl fill-column: 80
dnl End:

View file

@ -0,0 +1,79 @@
#! /bin/tcsh -f
#
# Script to create a completely new EO project from templates
#
# Originally by Marc Schoenauer
# Copyright (C) 2006 Jochen Küpper <jochen@fhi-berlin.mpg.de>
if ($PWD:t != Templates) then
echo "You must start this shell script from the EO Template directory"
exit
endif
if ($#argv < 1) then
echo "Usage: $0 ApplicationName [TargetDirName]"
echo " This will create ../TargetDirName if necessary (default dir name = ApplicationName),"
echo " and will also put all the files there that are strictly necessary to compile and run"
echo " your application."
exit
endif
# we're going to do something
echo " "
if ($#argv == 1) then
set TargetDir = ../$1
else
set TargetDir = ../$2
endif
if ( -d $TargetDir ) then
echo "Warning: The target directory does exist already."
echo -n "Overwrite (yes/no)? "
set REP = $<
if ($REP != "yes") then
echo "Stopping, nothing done!"
exit
endif
else if ( -e $TargetDir ) then
echo "Warning: $TargetDir exist but isn't a directory."
echo "Stopping, nothing done!"
exit
endif
mkdir -p $TargetDir/src
# creating files
echo "Creating source files for application $1 in $TargetDir/src"
sed s/MyStruct/$1/g eoMyStruct.tmpl > $TargetDir/src/eo$1.h
sed s/MyStruct/$1/g init.tmpl > $TargetDir/src/eo$1Init.h
sed s/MyStruct/$1/g stat.tmpl > $TargetDir/src/eo$1Stat.h
sed s/MyStruct/$1/g evalFunc.tmpl > $TargetDir/src/eo$1EvalFunc.h
sed s/MyStruct/$1/g mutation.tmpl > $TargetDir/src/eo$1Mutation.h
sed s/MyStruct/$1/g quadCrossover.tmpl > $TargetDir/src/eo$1QuadCrossover.h
sed s/MyStruct/$1/g MyStructSEA.cpp > $TargetDir/src/$1EA.cpp
echo "Creating build-support files for application $1 in $TargetDir"
sed s/MyStruct/$1/g configure.ac.tmpl > $TargetDir/configure.ac
sed s/MyStruct/$1/g Makefile.am.top-tmpl > $TargetDir/Makefile.am
sed s/MyStruct/$1/g Makefile.am.src-tmpl > $TargetDir/src/Makefile.am
sed s/MyStruct/$1/g README.tmpl > $TargetDir/README
touch $TargetDir/AUTHORS
touch $TargetDir/ChangeLog
touch $TargetDir/NEWS
echo "Successfully created project $1 in $TargetDir!"
echo "Start building the new project"
# building new project
cd $TargetDir
aclocal || exit
autoheader || exit
automake --add-missing --copy --gnu || exit
autoconf || exit
./configure || exit
make || exit
# done
echo "Project $1 successfully build in $TargetDir!"
echo "Implement your code and enjoy."

View file

@ -67,7 +67,7 @@ using namespace std;
// how to initialize the population // how to initialize the population
// it IS representation independent if an eoInit is given // it IS representation independent if an eoInit is given
#include <do/make_pop.h> #include <make_pop.h>
eoPop<eoMyStruct<double> >& make_pop(eoParser& _parser, eoState& _state, eoInit<eoMyStruct<double> > & _init) eoPop<eoMyStruct<double> >& make_pop(eoParser& _parser, eoState& _state, eoInit<eoMyStruct<double> > & _init)
{ {
return do_make_pop(_parser, _state, _init); return do_make_pop(_parser, _state, _init);
@ -79,7 +79,7 @@ eoPop<eoMyStruct<eoMinimizingFitness> >& make_pop(eoParser& _parser, eoState& _
} }
// the stopping criterion // the stopping criterion
#include <do/make_continue.h> #include <make_continue.h>
eoContinue<eoMyStruct<double> >& make_continue(eoParser& _parser, eoState& _state, eoEvalFuncCounter<eoMyStruct<double> > & _eval) eoContinue<eoMyStruct<double> >& make_continue(eoParser& _parser, eoState& _state, eoEvalFuncCounter<eoMyStruct<double> > & _eval)
{ {
return do_make_continue(_parser, _state, _eval); return do_make_continue(_parser, _state, _eval);
@ -91,7 +91,7 @@ eoContinue<eoMyStruct<eoMinimizingFitness> >& make_continue(eoParser& _parser, e
} }
// outputs (stats, population dumps, ...) // outputs (stats, population dumps, ...)
#include <do/make_checkpoint.h> #include <make_checkpoint.h>
eoCheckPoint<eoMyStruct<double> >& make_checkpoint(eoParser& _parser, eoState& _state, eoEvalFuncCounter<eoMyStruct<double> >& _eval, eoContinue<eoMyStruct<double> >& _continue) eoCheckPoint<eoMyStruct<double> >& make_checkpoint(eoParser& _parser, eoState& _state, eoEvalFuncCounter<eoMyStruct<double> >& _eval, eoContinue<eoMyStruct<double> >& _continue)
{ {
return do_make_checkpoint(_parser, _state, _eval, _continue); return do_make_checkpoint(_parser, _state, _eval, _continue);
@ -103,7 +103,7 @@ eoCheckPoint<eoMyStruct<eoMinimizingFitness> >& make_checkpoint(eoParser& _parse
} }
// evolution engine (selection and replacement) // evolution engine (selection and replacement)
#include <do/make_algo_scalar.h> #include <make_algo_scalar.h>
eoAlgo<eoMyStruct<double> >& make_algo_scalar(eoParser& _parser, eoState& _state, eoEvalFunc<eoMyStruct<double> >& _eval, eoContinue<eoMyStruct<double> >& _continue, eoGenOp<eoMyStruct<double> >& _op) eoAlgo<eoMyStruct<double> >& make_algo_scalar(eoParser& _parser, eoState& _state, eoEvalFunc<eoMyStruct<double> >& _eval, eoContinue<eoMyStruct<double> >& _continue, eoGenOp<eoMyStruct<double> >& _op)
{ {
return do_make_algo_scalar(_parser, _state, _eval, _continue, _op); return do_make_algo_scalar(_parser, _state, _eval, _continue, _op);
@ -116,7 +116,7 @@ eoAlgo<eoMyStruct<eoMinimizingFitness> >& make_algo_scalar(eoParser& _parser, e
// simple call to the algo. stays there for consistency reasons // simple call to the algo. stays there for consistency reasons
// no template for that one // no template for that one
#include <do/make_run.h> #include <make_run.h>
void run_ea(eoAlgo<eoMyStruct<double> >& _ga, eoPop<eoMyStruct<double> >& _pop) void run_ea(eoAlgo<eoMyStruct<double> >& _ga, eoPop<eoMyStruct<double> >& _pop)
{ {
do_run(_ga, _pop); do_run(_ga, _pop);