From 259dad2820d0585ee11fe21442301b16774be550 Mon Sep 17 00:00:00 2001
From: tlegrand <tlegrand>
Date: Fri, 15 Feb 2008 12:50:58 +0000
Subject: [PATCH] Completed eoInitPermutation: CTor now has a "isOneIndexed"
 parameter to assign 1..Indi_size as genotype values instead of 0..Indi_size

---
 eo/src/eoInit.h | 11 +++++++----
 1 file changed, 7 insertions(+), 4 deletions(-)

diff --git a/eo/src/eoInit.h b/eo/src/eoInit.h
index c329ecbd..ff69eba5 100644
--- a/eo/src/eoInit.h
+++ b/eo/src/eoInit.h
@@ -158,21 +158,24 @@ class eoInitPermutation: public eoInit<EOT>
 
     typedef typename EOT::AtomType AtomType;
 
-        eoInitPermutation(unsigned _chromSize)
-            : chromSize(_chromSize){}
+        eoInitPermutation(unsigned _chromSize, bool _isOneIndexed=true)
+            : chromSize(_chromSize), isOneIndexed(_isOneIndexed){}
 
         virtual void operator()(EOT& chrom)
         {
             chrom.resize(chromSize);            
             for(unsigned idx=0;idx <chrom.size();idx++)
-            	chrom[idx]=idx+1;           	
-            	
+            	if(isOneIndexed)
+            		chrom[idx]=idx+1;           	
+            	else
+            		chrom[idx]=idx;  
             std::random_shuffle(chrom.begin(), chrom.end(),gen);            
             chrom.invalidate();
         }
 
     private :
         unsigned chromSize;
+        bool isOneIndexed;
         UF_random_generator<unsigned int> gen;
 };